>ref|NM_192736.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1524

 Score =  139 bits (70), Expect = 1e-29
 Identities = 100/110 (90%)
 Strand = Plus / Minus

                                                                        
Query: 534  cttgcttttctcggacaagcatccaatccaaggccagatcatattctattgtgttgggtt 593
            |||||||| ||||||||||||||||||||||||||| |||||| || ||||| |||||||
Sbjct: 1339 cttgctttgctcggacaagcatccaatccaaggccaaatcatactccattgtattgggtt 1280

                                                              
Query: 594  gagaacaatgtgatgtcgacactgccttcttctgctcttctcgttgtctt 643
            |||||||||| || || || |||||||||||||| |||||||||||||||
Sbjct: 1279 gagaacaatgcgaggttgaaactgccttcttctgttcttctcgttgtctt 1230

>dbj|AK102292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089K24, full
            insert sequence
          Length = 2163

 Score =  139 bits (70), Expect = 1e-29
 Identities = 100/110 (90%)
 Strand = Plus / Minus

                                                                        
Query: 534  cttgcttttctcggacaagcatccaatccaaggccagatcatattctattgtgttgggtt 593
            |||||||| ||||||||||||||||||||||||||| |||||| || ||||| |||||||
Sbjct: 1616 cttgctttgctcggacaagcatccaatccaaggccaaatcatactccattgtattgggtt 1557

                                                              
Query: 594  gagaacaatgtgatgtcgacactgccttcttctgctcttctcgttgtctt 643
            |||||||||| || || || |||||||||||||| |||||||||||||||
Sbjct: 1556 gagaacaatgcgaggttgaaactgccttcttctgttcttctcgttgtctt 1507

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                            
Query: 534      cttgcttttctcggacaagcatccaatccaaggccagatcatattctattgtgttgggtt 593
                |||||||| ||||||||||||||||||||||||||| |||||| || ||||| |||||||
Sbjct: 24139762 cttgctttgctcggacaagcatccaatccaaggccaaatcatactccattgtattgggtt 24139703

                                                  
Query: 594      gagaacaatgtgatgtcgacactgccttcttctg 627
                |||||||||| || || || ||||||||||||||
Sbjct: 24139702 gagaacaatgcgaggttgaaactgccttcttctg 24139669

>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E03
          Length = 164839

 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                          
Query: 534    cttgcttttctcggacaagcatccaatccaaggccagatcatattctattgtgttgggtt 593
              |||||||| ||||||||||||||||||||||||||| |||||| || ||||| |||||||
Sbjct: 115584 cttgctttgctcggacaagcatccaatccaaggccaaatcatactccattgtattgggtt 115525

                                                
Query: 594    gagaacaatgtgatgtcgacactgccttcttctg 627
              |||||||||| || || || ||||||||||||||
Sbjct: 115524 gagaacaatgcgaggttgaaactgccttcttctg 115491

>gb|AY106082.1| Zea mays PCO136762 mRNA sequence
          Length = 832

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                       
Query: 534 cttgcttttctcggacaagcatccaatccaaggccagatcatattctattgtgttgggtt 593
           |||||||||| || | ||||||||| ||||||||||  || || || || |||||||| |
Sbjct: 482 cttgcttttcccgaagaagcatccagtccaaggccaagtcgtactcgatcgtgttgggct 423

                                                
Query: 594 gagaacaatgtgatgtcgacactgccttcttctgctc 630
           | |||||||| || || |  || ||||||||||||||
Sbjct: 422 gggaacaatgcgaggttgctacagccttcttctgctc 386

>gb|DQ119104.1| Aeromonas hydrophila FlaA (flaA), FlaB (flaB), FlaG (flaG), FlaH
             (flaH), FlaJ (flaJ), Maf-1 (maf-1), Maf-2 (maf-2), NeuB
             (neuB), FlmD (flmD), NeuA-like (neuA), FlmH (flmH), and
             3-oxoacyl-carrier-protein reductase genes, complete cds;
             and unknown genes
          Length = 15311

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 40    catgcagcagcggcagcagatg 61
             ||||||||||||||||||||||
Sbjct: 12557 catgcagcagcggcagcagatg 12578

>emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 on chromosome 3,
             complete sequence
          Length = 97738

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 566   gccagatcatattctattgtgttgggttgagaacaatgtga 606
             |||| ||||||||| ||  ||||||| ||||||||||||||
Sbjct: 29276 gccatatcatattcaatgttgttgggctgagaacaatgtga 29316

>gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete sequence
          Length = 92216

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 566  gccagatcatattctattgtgttgggttgagaacaatgtga 606
            |||| ||||||||| ||  ||||||| ||||||||||||||
Sbjct: 7257 gccatatcatattcaatgttgttgggctgagaacaatgtga 7217

>emb|AL691523.6| Human DNA sequence from clone RP13-531C17 on chromosome 1 Contains the
             5' end of the gene for glycine- glutamate-
             thienylcyclohexylpiperidine-binding protein (KIAA0562),
             the DFFB gene for DNA fragmentation factor 40kDa beta
             polypeptide (caspase-activated DNase), the 3' end of the
             gene for a novel protein and three CpG islands, complete
             sequence
          Length = 69982

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 643   tgggttcattttctgattactgatg 667
             |||||||| ||||||||||||||||
Sbjct: 49494 tgggttcaatttctgattactgatg 49518

>emb|AL645564.6| Mouse DNA sequence from clone RP23-35N22 on chromosome 11 Contains part
              of a novel gene and two CpG islands, complete sequence
          Length = 205101

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 558    aatccaaggccagatcatatt 578
              |||||||||||||||||||||
Sbjct: 131027 aatccaaggccagatcatatt 131007

>gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, complete sequence
          Length = 217409

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 154    aagatatgtcatgagaaacttccca 178
              ||||||||||| |||||||||||||
Sbjct: 140651 aagatatgtcaagagaaacttccca 140675

>gb|AC123656.9| Mus musculus chromosome 15, clone RP23-188M21, complete sequence
          Length = 200922

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 638   tgtcttgggttcattttctg 657
             ||||||||||||||||||||
Sbjct: 74098 tgtcttgggttcattttctg 74079

>gb|AC169036.3| Mus musculus BAC clone RP23-382O15 from chromosome 5, complete sequence
          Length = 215306

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 616    tgccttcttctgctcttctc 635
              ||||||||||||||||||||
Sbjct: 126535 tgccttcttctgctcttctc 126516

>gb|AC114605.11| Mus musculus chromosome 5, clone RP23-373H20, complete sequence
          Length = 163969

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 616    tgccttcttctgctcttctc 635
              ||||||||||||||||||||
Sbjct: 115297 tgccttcttctgctcttctc 115316

>emb|CR936442.13| Zebrafish DNA sequence from clone DKEY-266F7 in linkage group 19,
              complete sequence
          Length = 244065

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     atcctaaaacatgcagcagc 50
              ||||||||||||||||||||
Sbjct: 125013 atcctaaaacatgcagcagc 125032

>ref|XM_765131.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_387_53602_55983) partial mRNA
          Length = 2382

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  tgcagcagcggcagcagatg 61
           ||||||||||||||||||||
Sbjct: 744 tgcagcagcggcagcagatg 725

>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence
          Length = 257036

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   tctacttccttaagaaagaa 247
             ||||||||||||||||||||
Sbjct: 82786 tctacttccttaagaaagaa 82767

>emb|AL360172.17| Human DNA sequence from clone RP11-402D22 on chromosome 10 Contains the
             5' end of the variant of a novel gene, complete sequence
          Length = 188937

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 474   tggctgcaaacgacttcctctcac 497
             |||||||||| |||||||||||||
Sbjct: 90338 tggctgcaaatgacttcctctcac 90315

>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 221    ctatacatctacttccttaagaaa 244
              |||| |||||||||||||||||||
Sbjct: 435666 ctattcatctacttccttaagaaa 435689

>gb|AC021593.15| Homo sapiens chromosome 17, clone RP11-153A23, complete sequence
          Length = 177738

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    cagcagcggcagcagatggg 63
             ||||||||||||||||||||
Sbjct: 83898 cagcagcggcagcagatggg 83879

>gb|AC103753.2| Homo sapiens chromosome 15, clone RP11-460N1, complete sequence
          Length = 179822

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 510    tatgaagtatactgaacttc 529
              ||||||||||||||||||||
Sbjct: 132164 tatgaagtatactgaacttc 132183

>gb|AC010024.5| Drosophila melanogaster 3L BAC RP98-26E20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181004

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     aaacatgcagcagcggcagc 56
              ||||||||||||||||||||
Sbjct: 178571 aaacatgcagcagcggcagc 178552

>emb|BX322794.6| Zebrafish DNA sequence from clone RP71-44B8 in linkage group 23, complete
              sequence
          Length = 144572

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    ttcaattagttgaagccaaa 301
              ||||||||||||||||||||
Sbjct: 113790 ttcaattagttgaagccaaa 113771

>gb|AC109357.3| Homo sapiens BAC clone RP11-636M7 from 4, complete sequence
          Length = 110883

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 566   gccagatcatattctattgtgttg 589
             |||||||||||||| |||||||||
Sbjct: 10486 gccagatcatattccattgtgttg 10509

>dbj|AK142380.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:D430028F24 product:cation channel, sperm
            associated 2, full insert sequence
          Length = 2130

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 616  tgccttcttctgctcttctc 635
            ||||||||||||||||||||
Sbjct: 2034 tgccttcttctgctcttctc 2053

>gb|AC069407.2| Drosophila melanogaster 3L BAC RP98-30I5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 183714

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    aaacatgcagcagcggcagc 56
             ||||||||||||||||||||
Sbjct: 62343 aaacatgcagcagcggcagc 62362

>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete sequence
          Length = 156014

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    tctacttccttaagaaagaa 247
              ||||||||||||||||||||
Sbjct: 112921 tctacttccttaagaaagaa 112902

>gb|AE001438.3| Clostridium acetobutylicum ATCC 824 megaplasmid pSOL1, complete
             sequence
          Length = 192000

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 509   ttatgaagtatactgaactt 528
             ||||||||||||||||||||
Sbjct: 17112 ttatgaagtatactgaactt 17131

>gb|AE003562.3| Drosophila melanogaster chromosome 3L, section 23 of 83 of the complete
             sequence
          Length = 255329

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    aaacatgcagcagcggcagc 56
             ||||||||||||||||||||
Sbjct: 38830 aaacatgcagcagcggcagc 38849

>gb|AC157763.2| Pan troglodytes BAC clone CH251-340C15 from chromosome unknown, complete
              sequence
          Length = 198239

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 566    gccagatcatattctattgtgttg 589
              |||||||||||||| |||||||||
Sbjct: 146932 gccagatcatattccattgtgttg 146909

>emb|AL845466.4| Mouse DNA sequence from clone RP23-433P19 on chromosome 2, complete
             sequence
          Length = 197839

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 616   tgccttcttctgctcttctc 635
             ||||||||||||||||||||
Sbjct: 99385 tgccttcttctgctcttctc 99366


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,056,016
Number of Sequences: 3902068
Number of extensions: 6056016
Number of successful extensions: 117227
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117097
Number of HSP's gapped (non-prelim): 130
length of query: 709
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 686
effective length of database: 17,143,297,704
effective search space: 11760302224944
effective search space used: 11760302224944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)