Clone Information

BLAST Search Result

Clone Name	rbaal4a11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SNF7_KLULA (Q6CJL0) Vacuolar sorting protein SNF7 (Vacuolar prot...	71	3e-12
2	SNF7_CANGA (Q6FW96) Vacuolar sorting protein SNF7 (Vacuolar prot...	69	1e-11
3	SNF7_CANAL (Q5ABD0) Vacuolar sorting protein SNF7 (Vacuolar prot...	67	7e-11
4	CHMP5_XENTR (Q5FW29) Charged multivesicular body protein 5 (Chro...	67	7e-11
5	CHMP5_XENLA (Q6DD52) Charged multivesicular body protein 5 (Chro...	66	1e-10
6	SNF7_ASHGO (Q753W3) Vacuolar sorting protein SNF7 (Vacuolar prot...	65	3e-10
7	SNF7_DEBHA (Q6BSH2) Vacuolar sorting protein SNF7 (Vacuolar prot...	64	4e-10
8	SNF7_YEAST (P39929) Vacuolar sorting protein SNF7 (DOA4-independ...	64	6e-10
9	CHM4B_XENTR (Q6GL11) Charged multivesicular body protein 4b (Chr...	63	8e-10
10	CHM4B_XENLA (Q5XGW6) Charged multivesicular body protein 4b (Chr...	63	8e-10
11	CHM4B_BRARE (Q7ZVC4) Charged multivesicular body protein 4b (Chr...	63	8e-10
12	CHMP5_PONPY (Q5RBR3) Charged multivesicular body protein 5 (Chro...	63	1e-09
13	CHMP5_HUMAN (Q9NZZ3) Charged multivesicular body protein 5 (Chro...	63	1e-09
14	CHM4C_BRARE (Q6IQ73) Charged multivesicular body protein 4c (Chr...	62	1e-09
15	SNF7_SCHPO (Q9P7F7) Vacuolar sorting protein snf7 (Vacuolar prot...	62	1e-09
16	SNF7_CRYNE (Q5KL29) Vacuolar sorting protein SNF7 (Vacuolar prot...	62	1e-09
17	CHM4B_MOUSE (Q9D8B3) Charged multivesicular body protein 4b (Chr...	62	2e-09
18	CHM4B_HUMAN (Q9H444) Charged multivesicular body protein 4b (Chr...	62	2e-09
19	CHMP5_RAT (Q4QQV8) Charged multivesicular body protein 5 (Chroma...	61	3e-09
20	CHMP5_MOUSE (Q9D7S9) Charged multivesicular body protein 5 (Chro...	61	3e-09
21	CG301_HUMAN (P59074) Protein CGI-301	60	6e-09
22	CHM4B_CHICK (Q5ZHP5) Charged multivesicular body protein 4b (Chr...	59	1e-08
23	CHM4A_HUMAN (Q9BY43) Charged multivesicular body protein 4a (Chr...	57	7e-08
24	SNF7_YARLI (Q6CBS3) Vacuolar sorting protein SNF7 (Vacuolar prot...	56	1e-07
25	CHM4C_XENLA (Q6GNN8) Charged multivesicular body protein 4c (Chr...	55	3e-07
26	CHM6A_XENLA (Q6GMA4) Charged multivesicular body protein 6-A (Ch...	54	3e-07
27	CHM6B_XENLA (Q6NU11) Charged multivesicular body protein 6-B (Ch...	53	1e-06
28	CHMP6_BRARE (Q503V0) Charged multivesicular body protein 6 (Chro...	52	1e-06
29	CHM4C_RAT (Q569C1) Charged multivesicular body protein 4c (Chrom...	50	9e-06
30	CHM4C_MOUSE (Q9D7F7) Charged multivesicular body protein 4c (Chr...	49	2e-05
31	CHMP6_MOUSE (P0C0A3) Charged multivesicular body protein 6 (Chro...	45	2e-04
32	CHMP6_PONPY (Q5R861) Charged multivesicular body protein 6 (Chro...	45	3e-04
33	CHMP6_HUMAN (Q96FZ7) Charged multivesicular body protein 6 (Chro...	45	3e-04
34	CHMP6_CHICK (Q5ZL55) Charged multivesicular body protein 6 (Chro...	44	4e-04
35	SNF7_MAGGR (P0C149) Vacuolar sorting protein SNF7 (Vacuolar prot...	44	4e-04
36	CHMP5_BRARE (Q7T339) Charged multivesicular body protein 5 (Chro...	44	6e-04
37	CHMP7_XENTR (Q5FW14) Protein CHMP7	39	0.020
38	CHMP7_XENLA (Q7T0X5) Protein CHMP7	37	0.058
39	VPS60_YEAST (Q03390) Vacuolar protein sorting-associated protein...	37	0.058
40	DNAK_WOLTR (Q5GSE1) Chaperone protein dnaK (Heat shock protein 7...	31	3.2
41	HISX_GLUOX (Q5FS83) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)	31	3.2
42	SERC_STRMU (Q8DSV3) Phosphoserine aminotransferase (EC 2.6.1.52)...	31	4.1
43	DMDA_DROME (Q9VDW6) Dystrophin, isoforms A/C/DLP1/DLP3	30	5.4
44	RAD50_SULTO (Q96YR5) DNA double-strand break repair rad50 ATPase	30	7.1
45	ACLE_AGKAC (Q9W6M5) Acutolysin-E precursor (EC 3.4.24.-)	30	7.1
46	DNAK_WOLPM (Q73GL7) Chaperone protein dnaK (Heat shock protein 7...	30	7.1
47	ADAM1_RAT (P70505) ADAM 1 precursor (EC 3.4.24.-) (A disintegrin...	30	9.2
48	HTK7_HYDAT (Q25197) Putative insulin-like peptide receptor precu...	30	9.2
49	SPIKE_CVMJC (Q02385) Spike glycoprotein precursor (Peplomer prot...	30	9.2
50	SPIKE_CVM4 (P22432) Spike glycoprotein precursor (Peplomer prote...	30	9.2
51	SPIKE_CVMJH (P11225) Spike glycoprotein precursor (Peplomer prot...	30	9.2

>SNF7_KLULA (Q6CJL0) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 232

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 34/85 (40%), Positives = 56/85 (65%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+K+LYE Q+++L +    +  Q+  +E A    ET+ A++ GASAMK +HK  ++D V
Sbjct: 64  LKKKKLYESQLDKLQSQIDSLDQQLYSIENANLNLETLKAMKQGASAMKNIHKGLDLDKV 123

Query: 513 DKTMDEINDNMENMRQIQDLLSAPM 439
           D TMDEI + +E  ++I + +S P+
Sbjct: 124 DDTMDEIREQVELNQEISEAISKPL 148

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>SNF7_CANGA (Q6FW96) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 228

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 33/85 (38%), Positives = 54/85 (63%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+K++YE Q+ +L +    +  Q+  +E A    ET+ A++ GA AMK++H   +ID V
Sbjct: 65  LKKKKVYEGQLVKLESQMDSLEQQLFSIESANLNLETMRAMKQGAKAMKSIHSGLDIDRV 124

Query: 513 DKTMDEINDNMENMRQIQDLLSAPM 439
           D+TMDEI + +E   +I D +S P+
Sbjct: 125 DETMDEIREQVELGEEISDAISRPL 149

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>SNF7_CANAL (Q5ABD0) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 226

 Score = 66.6 bits (161), Expect = 7e-11
 Identities = 33/86 (38%), Positives = 53/86 (61%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LKRK+ YE  + ++ N    +  Q+I +EGA    ET+ A++ GA AMK +H   ++D V
Sbjct: 65  LKRKKGYESNLLKVENQIETLETQLISIEGANLNLETMKAMKQGAKAMKQIHGEYDVDKV 124

Query: 513 DKTMDEINDNMENMRQIQDLLSAPMG 436
           + TMDEI + +E   +I + +S P+G
Sbjct: 125 EDTMDEIREQVELADEISEAISRPVG 150

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>CHMP5_XENTR (Q5FW29) Charged multivesicular body protein 5 (Chromatin-modifying|
           protein 5)
          Length = 219

 Score = 66.6 bits (161), Expect = 7e-11
 Identities = 32/86 (37%), Positives = 47/86 (54%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR+YEQQ + L      +      ++  K T  TVDA++ GA  MK  +K   ID +
Sbjct: 69  LKQKRMYEQQRDNLNQQSFNMEQTNYAIQSLKDTKTTVDAMKVGAKEMKKAYKQVKIDQI 128

Query: 513 DKTMDEINDNMENMRQIQDLLSAPMG 436
           +   D++ D MEN  +IQ+ LS   G
Sbjct: 129 EDLQDQLEDMMENANEIQEALSRSYG 154

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>CHMP5_XENLA (Q6DD52) Charged multivesicular body protein 5 (Chromatin-modifying|
           protein 5)
          Length = 219

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 32/86 (37%), Positives = 47/86 (54%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR+YEQQ + L      +      ++  K T  TVDA++ GA  MK  +K   ID +
Sbjct: 69  LKQKRMYEQQRDNLNQQSFNMEQANYTIQTLKDTKTTVDAMKVGAKEMKKAYKQVKIDQI 128

Query: 513 DKTMDEINDNMENMRQIQDLLSAPMG 436
           +   D++ D MEN  +IQ+ LS   G
Sbjct: 129 EDLQDQLEDMMENANEIQEALSRSYG 154

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>SNF7_ASHGO (Q753W3) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 237

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 30/85 (35%), Positives = 54/85 (63%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LKRK+++E Q+ ++      +  Q+  +E A    ET+ A++ GASAMK +H+  +++ V
Sbjct: 66  LKRKKVFESQLLKIDKQVDSLEQQLYSIENANLNLETMKAMKQGASAMKHIHEGLDVERV 125

Query: 513 DKTMDEINDNMENMRQIQDLLSAPM 439
           D+TMDEI + +E   +I + +S P+
Sbjct: 126 DETMDEIREQVELGEEISEAISRPL 150

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>SNF7_DEBHA (Q6BSH2) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 226

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 31/86 (36%), Positives = 52/86 (60%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LKRK+ YE  + ++ N    +  Q+  +EGA    ET+ A++ GA AMK +H   ++D V
Sbjct: 64  LKRKKGYEANLMKIENQIDSLETQLTSIEGANLNLETMKAMKQGAQAMKQIHGEYDVDKV 123

Query: 513 DKTMDEINDNMENMRQIQDLLSAPMG 436
           + TMD+I + +E   +I + +S P+G
Sbjct: 124 ENTMDDIREQVELADEISEAISRPVG 149

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>SNF7_YEAST (P39929) Vacuolar sorting protein SNF7 (DOA4-independent|
           degradation protein 1) (Vacuolar protein
           sorting-associated protein VPS32)
          Length = 240

 Score = 63.5 bits (153), Expect = 6e-10
 Identities = 31/85 (36%), Positives = 50/85 (58%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+K+  EQ + ++      +  Q+  +E A    ET+ A++ GA AMK +H   +ID V
Sbjct: 67  LKKKKTIEQLLSKVEGTMESMEQQLFSIESANLNLETMRAMQEGAKAMKTIHSGLDIDKV 126

Query: 513 DKTMDEINDNMENMRQIQDLLSAPM 439
           D+TMDEI + +E   +I D +S P+
Sbjct: 127 DETMDEIREQVELGDEISDAISRPL 151

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>CHM4B_XENTR (Q6GL11) Charged multivesicular body protein 4b|
           (Chromatin-modifying protein 4b) (CHMP4b)
          Length = 222

 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 34/88 (38%), Positives = 49/88 (55%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LKRK+ YE+Q+ Q+      I  Q   LE A   TE +  +   A AMKA H + +I+
Sbjct: 65  QALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIE 124

Query: 519 DVDKTMDEINDNMENMRQIQDLLSAPMG 436
            VD+ M +I D  E  ++I D +S P+G
Sbjct: 125 KVDELMQDIADQQELAQEISDAISKPVG 152

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>CHM4B_XENLA (Q5XGW6) Charged multivesicular body protein 4b|
           (Chromatin-modifying protein 4b) (CHMP4b)
          Length = 222

 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 34/88 (38%), Positives = 49/88 (55%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LKRK+ YE+Q+ Q+      I  Q   LE A   TE +  +   A AMKA H + +I+
Sbjct: 65  QALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIE 124

Query: 519 DVDKTMDEINDNMENMRQIQDLLSAPMG 436
            VD+ M +I D  E  ++I D +S P+G
Sbjct: 125 KVDELMQDIADQQELAQEISDAISKPVG 152

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>CHM4B_BRARE (Q7ZVC4) Charged multivesicular body protein 4b|
           (Chromatin-modifying protein 4b) (CHMP4b)
          Length = 220

 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 34/88 (38%), Positives = 49/88 (55%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LKRK+ YE+Q+ Q+      I  Q   LE A   TE +  +   A AMKA H + +ID
Sbjct: 65  QALKRKKRYEKQLAQIDGTLSTIEFQREALENAHTNTEVIKNMGYAAKAMKAAHDNMDID 124

Query: 519 DVDKTMDEINDNMENMRQIQDLLSAPMG 436
            VD+ M +I +  E  ++I D +S P+G
Sbjct: 125 KVDELMQDIIEQQELAQEISDAISKPVG 152

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>CHMP5_PONPY (Q5RBR3) Charged multivesicular body protein 5 (Chromatin-modifying|
           protein 5)
          Length = 219

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 30/86 (34%), Positives = 46/86 (53%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR+YEQQ + L      +      ++  K T  TVDA++ G   MK  +K   ID +
Sbjct: 69  LKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQI 128

Query: 513 DKTMDEINDNMENMRQIQDLLSAPMG 436
           +   D++ D ME+  +IQ+ LS   G
Sbjct: 129 EDLQDQLEDMMEDANEIQEALSRSYG 154

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>CHMP5_HUMAN (Q9NZZ3) Charged multivesicular body protein 5 (Chromatin-modifying|
           protein 5) (Vacuolar protein sorting 60) (Vps60)
           (hVps60) (SNF7 domain-containing protein 2)
          Length = 219

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 30/86 (34%), Positives = 46/86 (53%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR+YEQQ + L      +      ++  K T  TVDA++ G   MK  +K   ID +
Sbjct: 69  LKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQI 128

Query: 513 DKTMDEINDNMENMRQIQDLLSAPMG 436
           +   D++ D ME+  +IQ+ LS   G
Sbjct: 129 EDLQDQLEDMMEDANEIQEALSRSYG 154

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>CHM4C_BRARE (Q6IQ73) Charged multivesicular body protein 4c|
           (Chromatin-modifying protein 4c) (CHMP4c)
          Length = 224

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 33/88 (37%), Positives = 48/88 (54%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LKRK+ YE+Q+ Q+      I  Q   LE A   TE +  +   A AMK  H++ +ID
Sbjct: 65  QALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKTAHENMDID 124

Query: 519 DVDKTMDEINDNMENMRQIQDLLSAPMG 436
            VD  M +I +  E  ++I D +S P+G
Sbjct: 125 KVDDLMQDITEQQELAQEISDAISRPVG 152

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>SNF7_SCHPO (Q9P7F7) Vacuolar sorting protein snf7 (Vacuolar protein|
           sorting-associated protein vps32)
          Length = 222

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 28/86 (32%), Positives = 51/86 (59%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LKRK+++E ++ ++   +  I  Q+  ++ A    ET+ A+R GA AMK++ +  + D V
Sbjct: 64  LKRKKMHENELVKIEGSRNNIEQQLFSIQNANLNFETLQAMRQGAEAMKSIQRGMDADKV 123

Query: 513 DKTMDEINDNMENMRQIQDLLSAPMG 436
           D+ MD+I D      +I  ++S P+G
Sbjct: 124 DQIMDKIRDQQTISEEISTMISTPVG 149

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>SNF7_CRYNE (Q5KL29) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 220

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 27/86 (31%), Positives = 52/86 (60%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           L++K+ +E +++++   +L +  Q+  +E A    ET+ A++ GA A+K +H +   + V
Sbjct: 65  LRQKKAHENELDRIAGTRLTLETQVNAIESANLNAETMVAMKKGADALKGIHSNLTAEGV 124

Query: 513 DKTMDEINDNMENMRQIQDLLSAPMG 436
           D TMD+I + M+    I D +S P+G
Sbjct: 125 DATMDKIREQMDLTNDISDAISNPVG 150

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>CHM4B_MOUSE (Q9D8B3) Charged multivesicular body protein 4b|
           (Chromatin-modifying protein 4b) (CHMP4b)
          Length = 224

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 34/88 (38%), Positives = 47/88 (53%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LKRK+ YE+Q+ Q+      I  Q   LE A   TE +  +   A AMKA H + +ID
Sbjct: 67  QALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDID 126

Query: 519 DVDKTMDEINDNMENMRQIQDLLSAPMG 436
            VD+ M +I D  E   +I   +S P+G
Sbjct: 127 KVDELMQDIADQQELAEEISTAISKPVG 154

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>CHM4B_HUMAN (Q9H444) Charged multivesicular body protein 4b|
           (Chromatin-modifying protein 4b) (CHMP4b) (Vacuolar
           protein sorting 7-2) (SNF7-2) (hSnf7-2) (SNF7 homolog
           associated with Alix 1) (hVps32)
          Length = 224

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 34/88 (38%), Positives = 47/88 (53%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LKRK+ YE+Q+ Q+      I  Q   LE A   TE +  +   A AMKA H + +ID
Sbjct: 67  QALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDID 126

Query: 519 DVDKTMDEINDNMENMRQIQDLLSAPMG 436
            VD+ M +I D  E   +I   +S P+G
Sbjct: 127 KVDELMQDIADQQELAEEISTAISKPVG 154

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>CHMP5_RAT (Q4QQV8) Charged multivesicular body protein 5 (Chromatin-modifying|
           protein 5)
          Length = 219

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 29/86 (33%), Positives = 45/86 (52%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR+YEQQ + L      +      ++  K T  TVDA++ G   MK  +K   ID +
Sbjct: 69  LKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKEVKIDQI 128

Query: 513 DKTMDEINDNMENMRQIQDLLSAPMG 436
           +   D++ D ME+  +IQ+ L    G
Sbjct: 129 EDLQDQLEDMMEDANEIQEALGRSYG 154

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>CHMP5_MOUSE (Q9D7S9) Charged multivesicular body protein 5 (Chromatin-modifying|
           protein 5) (SNF7 domain-containing protein 2)
          Length = 219

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 29/86 (33%), Positives = 45/86 (52%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR+YEQQ + L      +      ++  K T  TVDA++ G   MK  +K   ID +
Sbjct: 69  LKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKEVKIDQI 128

Query: 513 DKTMDEINDNMENMRQIQDLLSAPMG 436
           +   D++ D ME+  +IQ+ L    G
Sbjct: 129 EDLQDQLEDMMEDANEIQEALGRSYG 154

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>CG301_HUMAN (P59074) Protein CGI-301|
          Length = 171

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 33/88 (37%), Positives = 47/88 (53%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LKRK+ YE+Q+ Q+      I  Q   LE A   TE +  + + A A KA H + +ID
Sbjct: 27  QALKRKKRYEKQLAQIDGTLSTIEFQQQALENANTNTEVLKNMGSAAKAKKAAHDNMDID 86

Query: 519 DVDKTMDEINDNMENMRQIQDLLSAPMG 436
            VD+ M +I D  E   +I   +S P+G
Sbjct: 87  KVDELMQDIADQQELGEEISTAISKPVG 114

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>CHM4B_CHICK (Q5ZHP5) Charged multivesicular body protein 4b|
           (Chromatin-modifying protein 4b) (CHMP4b)
          Length = 227

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 33/88 (37%), Positives = 47/88 (53%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LKRK+ YE+Q+ Q+      I  Q   LE A   TE +  +   A AMKA H + +ID
Sbjct: 69  QALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDID 128

Query: 519 DVDKTMDEINDNMENMRQIQDLLSAPMG 436
            VD+ M +I +  E   +I   +S P+G
Sbjct: 129 KVDELMQDIAEQQELADEISTAISKPVG 156

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>CHM4A_HUMAN (Q9BY43) Charged multivesicular body protein 4a|
           (Chromatin-modifying protein 4a) (CHMP4a) (Vacuolar
           protein sorting 7-1) (SNF7-1) (hSnf-1) (SNF7 homolog
           associated with Alix-2)
          Length = 222

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 29/88 (32%), Positives = 46/88 (52%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q L+RK+ +EQQ+ Q       +  Q   +E A    E +  +   A +MK  ++  +ID
Sbjct: 64  QALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDID 123

Query: 519 DVDKTMDEINDNMENMRQIQDLLSAPMG 436
            VD+ M +I +  E  +QI D +S PMG
Sbjct: 124 KVDELMTDITEQQEVAQQISDAISRPMG 151

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>SNF7_YARLI (Q6CBS3) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 215

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 30/84 (35%), Positives = 46/84 (54%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+K+  E+Q E +      +   +  LE A    ET+ A++ GA AMK +H + NID V
Sbjct: 60  LKKKKNLEKQQETVQGSIDSLQTSINTLETANLNLETMKAMQEGAKAMKQIHGNMNIDKV 119

Query: 513 DKTMDEINDNMENMRQIQDLLSAP 442
           DK MDE  D +    ++ + +S P
Sbjct: 120 DKIMDETRDQVALSEEVSEAISRP 143

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>CHM4C_XENLA (Q6GNN8) Charged multivesicular body protein 4c|
           (Chromatin-modifying protein 4c) (CHMP4c)
          Length = 227

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 27/88 (30%), Positives = 49/88 (55%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LK+K+  E+Q+ Q+      I  Q   LE +   TE +  +   A AMKA H++ +++
Sbjct: 71  QALKKKKRLEKQLAQIDGTLSTIEFQREALENSHTNTEVLKNMGYAAKAMKAAHENMDLE 130

Query: 519 DVDKTMDEINDNMENMRQIQDLLSAPMG 436
            +D  M +I++  +  ++I D +S P+G
Sbjct: 131 KIDDLMQDIHEQQDVAQEISDAISRPVG 158

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>CHM6A_XENLA (Q6GMA4) Charged multivesicular body protein 6-A|
           (Chromatin-modifying protein 6-A)
          Length = 199

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 26/85 (30%), Positives = 49/85 (57%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR  EQ +E+  N    +   +  +E A+   + ++ L+ G   +K MH+  +I++V
Sbjct: 63  LKKKRYQEQLLEKTDNQISNLEKMVEDIEFAQIEMKVIEGLKVGNECLKKMHEVMSIEEV 122

Query: 513 DKTMDEINDNMENMRQIQDLLSAPM 439
           ++ MDE  + +E  RQI ++LS  +
Sbjct: 123 ERIMDETQEGIEYQRQIDEMLSGSL 147

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>CHM6B_XENLA (Q6NU11) Charged multivesicular body protein 6-B|
           (Chromatin-modifying protein 6-B)
          Length = 199

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 26/85 (30%), Positives = 49/85 (57%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR  EQ +E+  N    +   +  +E A+   + ++ L+ G   +K MH+  +I++V
Sbjct: 63  LKKKRYQEQLLEKTDNQISNLEKMVDDIEFAQIEMKVIEGLKVGNEWLKKMHEVMSIEEV 122

Query: 513 DKTMDEINDNMENMRQIQDLLSAPM 439
           +K M+E  + +E  RQI ++LS  +
Sbjct: 123 EKIMEETQEGIEYQRQIDEMLSGSL 147

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>CHMP6_BRARE (Q503V0) Charged multivesicular body protein 6 (Chromatin-modifying|
           protein 6)
          Length = 205

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 25/85 (29%), Positives = 50/85 (58%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR  +Q +E+  N    +   +  +E A+   + ++ L+ G   +K MH+  +I++V
Sbjct: 63  LKKKRYQDQLLEKTENQISNLERMVQDIEFAQIEMKVIEGLKVGNDCLKKMHEVLSIEEV 122

Query: 513 DKTMDEINDNMENMRQIQDLLSAPM 439
           +K MDE +D +E  +QI ++L+  +
Sbjct: 123 EKIMDETHDAIEYQKQIDEMLAGSL 147

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>CHM4C_RAT (Q569C1) Charged multivesicular body protein 4c|
           (Chromatin-modifying protein 4c) (CHMP4c)
          Length = 232

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 25/84 (29%), Positives = 46/84 (54%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LKRK+ +E+Q+ Q+      I  Q   LE +   TE +  +   A AMKA+H++ +++
Sbjct: 67  QALKRKKRFEKQLTQIDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKAVHENMDLN 126

Query: 519 DVDKTMDEINDNMENMRQIQDLLS 448
            +D  M +I +  +  ++I +  S
Sbjct: 127 KIDDLMQDITEQQDIAQEISEAFS 150

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>CHM4C_MOUSE (Q9D7F7) Charged multivesicular body protein 4c|
           (Chromatin-modifying protein 4c) (CHMP4c)
          Length = 232

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 25/84 (29%), Positives = 45/84 (53%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNID 520
           Q LKRK+ +E+Q+ Q+      I  Q   LE +   TE +  +   A AMKA+H + +++
Sbjct: 67  QALKRKKRFEKQLTQVDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKAVHDNMDLN 126

Query: 519 DVDKTMDEINDNMENMRQIQDLLS 448
            +D  M +I +  +  ++I +  S
Sbjct: 127 KIDDLMQDITEQQDIAQEISEAFS 150

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>CHMP6_MOUSE (P0C0A3) Charged multivesicular body protein 6 (Chromatin-modifying|
           protein 6)
          Length = 199

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 22/82 (26%), Positives = 46/82 (56%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR  EQ +++  N    +   +  +E  +   + ++ L+ G   +  MH+  +I++V
Sbjct: 63  LKKKRYREQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQVGNECLNKMHQVMSIEEV 122

Query: 513 DKTMDEINDNMENMRQIQDLLS 448
           ++ +DE  + +E  RQI +LL+
Sbjct: 123 ERILDETQEAVEYQRQIDELLA 144

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>CHMP6_PONPY (Q5R861) Charged multivesicular body protein 6 (Chromatin-modifying|
           protein 6)
          Length = 200

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 22/82 (26%), Positives = 46/82 (56%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR  EQ +++  N    +   +  +E  +   + ++ L+ G   +  MH+  +I++V
Sbjct: 63  LKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEV 122

Query: 513 DKTMDEINDNMENMRQIQDLLS 448
           ++ +DE  + +E  RQI +LL+
Sbjct: 123 ERILDETQEAVEYQRQIDELLA 144

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>CHMP6_HUMAN (Q96FZ7) Charged multivesicular body protein 6 (Chromatin-modifying|
           protein 6) (Vacuolar protein sorting 20) (hVps20)
          Length = 200

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 22/82 (26%), Positives = 46/82 (56%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR  EQ +++  N    +   +  +E  +   + ++ L+ G   +  MH+  +I++V
Sbjct: 63  LKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEV 122

Query: 513 DKTMDEINDNMENMRQIQDLLS 448
           ++ +DE  + +E  RQI +LL+
Sbjct: 123 ERILDETQEAVEYQRQIDELLA 144

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>CHMP6_CHICK (Q5ZL55) Charged multivesicular body protein 6 (Chromatin-modifying|
           protein 6)
          Length = 199

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 21/85 (24%), Positives = 46/85 (54%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR  EQ +++  N    +   +  +E  +   + ++ L+ G   +  MH+  +I++V
Sbjct: 63  LKKKRYQEQLLDKTDNQISNLERMVQDIEFTQIEMKVIEGLKIGNECLNKMHQVMSIEEV 122

Query: 513 DKTMDEINDNMENMRQIQDLLSAPM 439
           ++ + E  D +E  RQI ++L+  +
Sbjct: 123 ERIIGETQDAVEYQRQIDEILAGSL 147

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>SNF7_MAGGR (P0C149) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 226

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 20/69 (28%), Positives = 40/69 (57%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LKRK+ +E  ++Q  +    +  Q+  +E A    ET++A++    AM+ +H    ++ V
Sbjct: 67  LKRKKTHEHSLDQTLSQIGTLEQQINAIESANINMETLEAMKKAGKAMEDIHGKLTVEKV 126

Query: 513 DKTMDEIND 487
           D+TMD++ +
Sbjct: 127 DETMDKLRE 135

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>CHMP5_BRARE (Q7T339) Charged multivesicular body protein 5 (Chromatin-modifying|
           protein 5)
          Length = 220

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDV 514
           LK+KR+YE Q +QL      +      ++  K T  TV+A++ GA  MK  +K+  ID  
Sbjct: 69  LKQKRMYEGQRDQLMQQSFNMEQANYTIQTLKDTKTTVEAMKIGAKEMKKAYKNVKID-- 126

Query: 513 DKTMDEIND-------NMENMRQIQDLLSAPMG 436
                +I D        ME+  ++Q+ LS   G
Sbjct: 127 -----QIEDLQDQLEDMMEDANEVQEALSRSYG 154

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>CHMP7_XENTR (Q5FW14) Protein CHMP7|
          Length = 468

 Score = 38.5 bits (88), Expect = 0.020
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 31/119 (26%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMK------AMH 538
           +CL++++L E+++ +L N Q  +   +  +  A+   + V A + G SA+K       M 
Sbjct: 268 RCLRKRKLLERRITELQNKQDTVQGILERIAAAETDRKVVSAYQMGVSALKLALKDVTME 327

Query: 537 KSTNI-----------DDVDKTM--------------DEINDNMENMRQIQDLLSAPMG 436
           K+ +I           DD+ +T+               E+ND ++N   I DL   P G
Sbjct: 328 KAESIVDQIQEYCDLQDDLSQTLASVSDADIDSEDLEKELNDILQNKEMIVDLPDVPSG 386

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>CHMP7_XENLA (Q7T0X5) Protein CHMP7|
          Length = 422

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 31/119 (26%)
 Frame = -1

Query: 699 QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNI- 523
           +CL++++L E+++ +L N Q  I   +  +  A+   + V A + G SA+K   K   + 
Sbjct: 268 RCLRKRKLVERRITELQNKQDNIQGILERISAAETDRKVVSAYQMGVSALKQALKDVTLE 327

Query: 522 ----------------DDVDKTMD--------------EINDNMENMRQIQDLLSAPMG 436
                           DD+ +T+               E+N+ ++N   I DL   P G
Sbjct: 328 KAESIVDQIQEYCDLQDDLSQTLSSVTDADVDSDDLERELNEILQNEEMIIDLPDVPSG 386

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>VPS60_YEAST (Q03390) Vacuolar protein sorting-associated protein VPS60|
          Length = 262

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 23/81 (28%), Positives = 43/81 (53%)
 Frame = -1

Query: 690 KRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDVD 511
           KRK+L E   + L +    +    +  +  + T  T++AL+   +AMKA +   NID + 
Sbjct: 109 KRKQL-ENMKDSLDSQSWSMTQAQLTNDNLQNTMITINALKQTNNAMKAQYGKINIDKLQ 167

Query: 510 KTMDEINDNMENMRQIQDLLS 448
              DE+ D +E   ++Q++L+
Sbjct: 168 DMQDEMLDLIEQGDELQEVLA 188

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>DNAK_WOLTR (Q5GSE1) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 635

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 19/68 (27%), Positives = 32/68 (47%)
 Frame = -1

Query: 690 KRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDVD 511
           KRK+  E  V+   +  +   ++ +   G K + E   A+    + +K   KS NIDDVD
Sbjct: 518 KRKKFVE--VKNQADSLVHSTEKSLKEYGDKVSPEDKSAIENAVNELKEASKSDNIDDVD 575

Query: 510 KTMDEIND 487
               +I +
Sbjct: 576 SIQQKITN 583

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>HISX_GLUOX (Q5FS83) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 430

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -1

Query: 642 QLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDVDKTMDE 496
           +LRI  + I  E A+   + +DALRT A  ++  H +    D+D T ++
Sbjct: 64  KLRISAEEIASEAARVPADLMDALRTAARRIETFHAAQMPKDLDFTDED 112

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>SERC_STRMU (Q8DSV3) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)|
          Length = 363

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = -1

Query: 600 KATTETVDALRTGASAMKAMHKSTNIDDVDKTMDEINDNMENMRQIQDLLSAP 442
           KA TE +D   +G S M+  H+S + DD+ K  +++         ++DL++ P
Sbjct: 20  KAQTEFLDYNHSGMSVMELSHRSKDFDDIIKDAEKL---------LRDLMAIP 63

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>DMDA_DROME (Q9VDW6) Dystrophin, isoforms A/C/DLP1/DLP3|
          Length = 3497

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = -1

Query: 672 EQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKA--MHKSTNIDDVDKTMD 499
           +Q++EQL  F   + D++  +     T E  +     A  +KA    +   +D +   + 
Sbjct: 427 KQKLEQLRQFLTSVEDRISHMSDIGPTLEEAEKQLLEAQKLKADLSEQQELVDSLSSMVV 486

Query: 498 EINDNMENMRQIQDLLSA 445
            +ND   N   ++D LSA
Sbjct: 487 IVNDTSGNFNDLEDRLSA 504

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>RAD50_SULTO (Q96YR5) DNA double-strand break repair rad50 ATPase|
          Length = 879

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 18/90 (20%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
 Frame = -1

Query: 693 LKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHK----STN 526
           LKRKR  E+  ++    +  + +         + ++ + +L+   S +++       S N
Sbjct: 327 LKRKRELEEDYKKYIEIKGELEELEEKERKFNSLSDRLKSLKIKLSEIESKISNRKISIN 386

Query: 525 IDDVDKTMDEINDNMENMRQIQDLLSAPMG 436
           I+++DK + ++N+++ N  Q ++ L++ +G
Sbjct: 387 IEELDKELQKLNEDLNNKNQEREKLASQLG 416

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>ACLE_AGKAC (Q9W6M5) Acutolysin-E precursor (EC 3.4.24.-)|
          Length = 609

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 562 SGSQCIHGLCCSFCTFQ 612
           SGSQC HG CC  C F+
Sbjct: 437 SGSQCGHGKCCEQCKFR 453

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>DNAK_WOLPM (Q73GL7) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 640

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 22/84 (26%), Positives = 37/84 (44%)
 Frame = -1

Query: 690 KRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKSTNIDDVD 511
           KRK+  E  V+   +  +   ++ +   G K + E   A+    + +K + KS NIDD  
Sbjct: 522 KRKKFIE--VKNQADSLVHSTEKSLTEYGDKVSPEDRSAIENAVNELKEVSKSDNIDDA- 578

Query: 510 KTMDEINDNMENMRQIQDLLSAPM 439
              D I   + N+ Q+   L   M
Sbjct: 579 ---DSIQQKVTNLSQLSMKLGEAM 599

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>ADAM1_RAT (P70505) ADAM 1 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 1) (Fertilin alpha subunit)
          Length = 789

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 565 GSQCIHGLCCSFCTFQHYHLIMNP 636
           G+QC  GLCC  CTF+    +  P
Sbjct: 476 GAQCSEGLCCYKCTFKKKGTLCRP 499

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>HTK7_HYDAT (Q25197) Putative insulin-like peptide receptor precursor (EC|
           2.7.10.1)
          Length = 1477

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 185 FCKYIGTARCFHGGLPVKTSEVHTE 111
           FC+Y+    C+HG L VK+++ + E
Sbjct: 49  FCQYLQNCTCWHGNLVVKSTKYYDE 73

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>SPIKE_CVMJC (Q02385) Spike glycoprotein precursor (Peplomer protein) (E2)|
            [Contains: Spike protein S1 (90B); Spike protein S2
            (90A)]
          Length = 1376

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = -1

Query: 678  LYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDAL--RTGASAMKAMHKSTNIDDVDKT 505
            LYE Q+    NF +  H++ I +   K T +    +     A   + +   +  D+V+  
Sbjct: 798  LYEMQIPT--NFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCDNVNAI 855

Query: 504  MDEINDNMENMR 469
            ++E+N+ ++NM+
Sbjct: 856  LNEVNNLLDNMQ 867

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>SPIKE_CVM4 (P22432) Spike glycoprotein precursor (Peplomer protein) (E2)|
            [Contains: Spike protein S1 (90B); Spike protein S2
            (90A)]
          Length = 1376

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = -1

Query: 678  LYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDAL--RTGASAMKAMHKSTNIDDVDKT 505
            LYE Q+    NF +  H++ I +   K T +    +     A   + +   +  D+V+  
Sbjct: 798  LYEMQIPT--NFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCDNVNAI 855

Query: 504  MDEINDNMENMR 469
            ++E+N+ ++NM+
Sbjct: 856  LNEVNNLLDNMQ 867

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>SPIKE_CVMJH (P11225) Spike glycoprotein precursor (Peplomer protein) (E2)|
           [Contains: Spike protein S1 (90B); Spike protein S2
           (90A)]
          Length = 1235

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = -1

Query: 678 LYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDAL--RTGASAMKAMHKSTNIDDVDKT 505
           LYE Q+    NF +  H++ I +   K T +    +     A   + +   +  D+V+  
Sbjct: 657 LYEMQIPT--NFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCDNVNAI 714

Query: 504 MDEINDNMENMR 469
           ++E+N+ ++NM+
Sbjct: 715 LNEVNNLLDNMQ 726


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,111,855
Number of Sequences: 219361
Number of extensions: 1621740
Number of successful extensions: 3819
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3809
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result