| Clone Name | rbaal3l06 |
|---|---|
| Clone Library Name | barley_pub |
>TLE6_MOUSE (Q9WVB3) Transducin-like enhancer protein 6 (Groucho-related| protein 6) Length = 581 Score = 32.3 bits (72), Expect = 1.1 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 2/110 (1%) Frame = -2 Query: 407 LRKSILMPKSAMALTIAASILGQTIGSRAERIRLKRAKLAAEGRGHEHATRLEAPVSLKT 228 LR +L S ++ G + A ++ +L EG + + ++L Sbjct: 346 LRTCLLSSNSRTLFAGGYNLPGVIVWDLAAPSLYEKCQLPCEGLSCQALANTKENMALAG 405 Query: 227 GSSGPVQLWDPLGLRVKGVVSPALVPTVGA--MY**DDHAYCGGCDNCIR 84 + G V++WD LR + +V PT A + DD+ + GG D C+R Sbjct: 406 FTDGTVRIWD---LRTQEIVRNLKGPTNSARNLVVKDDNIWTGGLDACLR 452
>CRIM1_CHICK (Q8AWW5) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)| Length = 1048 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/47 (40%), Positives = 22/47 (46%) Frame = +2 Query: 368 GPWRSSALGWTSSASL*KALQHGPPQTTALKTLWCAPSRCQEEHLLP 508 G W +A GW L AL G P T AL L C S+C+E P Sbjct: 22 GGWHLAAAGWL----LLLALLLGQPGTRALVCLPCDESKCEEPKSCP 64
>TNR6_BOVIN (P51867) Tumor necrosis factor receptor superfamily member 6| precursor (FASLG receptor) (Apoptosis-mediating surface antigen FAS) (Apo-1 antigen) (CD95 antigen) Length = 323 Score = 30.0 bits (66), Expect = 5.6 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 612 CDCCCPCSNIPHGICEGASPSAPTNKSSGDRA 517 C+ C PC+ HGI E +P++ T K G R+ Sbjct: 137 CEHCNPCTTCEHGIIEKCTPTSNT-KCKGSRS 167
>TNR6_PIG (O77736) Tumor necrosis factor receptor superfamily member 6| precursor (FASLG receptor) (Apoptosis-mediating surface antigen FAS) (Apo-1 antigen) (CD95 antigen) Length = 332 Score = 29.6 bits (65), Expect = 7.3 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 5/37 (13%) Frame = -1 Query: 612 CDCCCPCSNIPHGICEGASPSAPTN-----KSSGDRA 517 C+ C PC+ HG+ E +P++ T +S+G R+ Sbjct: 138 CEHCNPCTTCEHGVIENCTPTSNTKCREVFQSAGSRS 174
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 29.3 bits (64), Expect = 9.6 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -1 Query: 603 CCPCSNIPHGICEGASPSAPTNKSSG 526 C P + P G CEG SP AP+ G Sbjct: 4517 CQPSCSDPDGHCEGTSPEAPSTCEEG 4542
>IAA21_ORYSA (Q5Z749) Auxin-responsive protein IAA21 (Indoleacetic acid-induced| protein 21) Length = 266 Score = 29.3 bits (64), Expect = 9.6 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = -2 Query: 392 LMPKSAMALTIAASILGQTIGSRAERIRLKRAKLAAEGRGHEHATRLEAPVS 237 L+PK A +I+G G R E K A AAE E + +AP + Sbjct: 54 LLPKGGAKRGFADAIVGGPAGQRREAAGGKAAAAAAEAEEEEEKKKAQAPAA 105
>MTMR3_MOUSE (Q8K296) Myotubularin-related protein 3 (EC 3.1.3.48)| Length = 1075 Score = 29.3 bits (64), Expect = 9.6 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%) Frame = -2 Query: 482 WREHTTKFSVQWFAAVHAAVPFIGMLRKSILMPKSAMALTIAASIL-GQTIGSRAERIRL 306 W+EH + FA+ VP + LRK + A L++AA + GQ E + Sbjct: 641 WQEHGRSLELSSFASAGEEVPAMDSLRKPSRLLGGA-ELSVAAGVAEGQMENILQEATKE 699 Query: 305 KRAKLAAEGRGHEHATRL--EAPVSLKT--GSSGPVQLW 201 + RGH + EAP++ ++ + GPV L+ Sbjct: 700 ESGVEEPTHRGHTEVPEVKEEAPLAKESSMAAEGPVVLY 738
>GABD_DEIRA (O32507) Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)| (SSDH) Length = 477 Score = 29.3 bits (64), Expect = 9.6 Identities = 22/65 (33%), Positives = 32/65 (49%) Frame = -2 Query: 560 LRPQPLPTKVVVIALLGMAANVPLGIWREHTTKFSVQWFAAVHAAVPFIGMLRKSILMPK 381 L P+ +P A+L V LGI + + V FAA + V +L+ S L P+ Sbjct: 114 LEPKTIPVPQGEAAVLHAPLGVLLGIEPWNYPLYQVVRFAAPNLVVGNTVLLKHSELCPQ 173 Query: 380 SAMAL 366 SA+AL Sbjct: 174 SALAL 178
>FABG2_BRANA (Q93X67) 3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplast| precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 2) Length = 328 Score = 29.3 bits (64), Expect = 9.6 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Frame = -2 Query: 452 QWFAAVHAAVPFIGMLRKSILMPKSAMALTIAASILGQTIGSRAERIRLKRAKLAAEGRG 273 QW A VH+ +P GMLR P + + T+ + +A A + G Sbjct: 31 QW-APVHSPMPHFGMLRCGSRRPFATSSSTVVQA--------------QAQATAAEQSTG 75 Query: 272 HEHAT-RLEAPVSLKTGSS 219 E A ++E+PV + TG+S Sbjct: 76 EEEAVPKVESPVVVVTGAS 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,350,992 Number of Sequences: 219361 Number of extensions: 2149941 Number of successful extensions: 5832 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5571 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5829 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)