ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3l03 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 231 bits (590), Expect = 1e-60 Identities = 113/149 (75%), Positives = 127/149 (85%) Frame = -3 Query: 608 PLPEEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVE 429 P ++G P S YLRT+KVG+YV+ + +GMPHKFYHGRTGR+WNVTKRA+GVE Sbjct: 18 PFRKKGYIPLST-YLRTFKVGDYVD-VKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVE 75 Query: 428 INKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGP 249 +NKQ+GNRIIRKRIHVRVEHVQ SRCAEEF+LRK KND+LKA AKA GE ISTKRQP GP Sbjct: 76 VNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGP 135 Query: 248 KPGFMVEGTTIETVTPIPYDVVNDLKGGY 162 KPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 136 KPGFMVEGMTLETVTPIPYDVVNDLKGGY 164 Score = 32.0 bits (71), Expect = 1.5 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = -1 Query: 619 LFARPFRKKGYIP 581 LFARPFRKKGYIP Sbjct: 14 LFARPFRKKGYIP 26
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 127 bits (318), Expect = 3e-29 Identities = 69/130 (53%), Positives = 91/130 (70%), Gaps = 3/130 (2%) Frame = -3 Query: 569 YLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKR 390 YL +K+GEYV+ A +GMP K+YHGRTG VWNVTKRAIGVEINK+V +RII+KR Sbjct: 30 YLTNFKIGEYVDVVG-NAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKR 88 Query: 389 IHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK-ARGEVISTKRQPLGPKPGFMV--EGTT 219 IHVR++HV+ S C + F R +ND++K +A A+ V STKR P+ PK G ++ +G Sbjct: 89 IHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQV 148 Query: 218 IETVTPIPYD 189 ET IPY+ Sbjct: 149 PETCHAIPYE 158
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 123 bits (309), Expect = 4e-28 Identities = 61/129 (47%), Positives = 87/129 (67%), Gaps = 2/129 (1%) Frame = -3 Query: 569 YLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKR 390 YL+ YKVG+ V+ + +GMPHKFY G+TG V+NVTK ++GV INK VGNR + KR Sbjct: 30 YLKVYKVGDIVDIKA-NGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKR 88 Query: 389 IHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTI 216 +++RVEH++ S+C +EF R N +AEAKA+G + KRQP P+ +V EG Sbjct: 89 LNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVP 148 Query: 215 ETVTPIPYD 189 +T+ P+PY+ Sbjct: 149 QTLAPVPYE 157
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 123 bits (308), Expect = 5e-28 Identities = 61/129 (47%), Positives = 87/129 (67%), Gaps = 2/129 (1%) Frame = -3 Query: 569 YLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKR 390 YL+ YKVG+ V+ + +GMPHKFY G+TG V+NVTK ++GV INK VGNR + KR Sbjct: 30 YLKIYKVGDIVDIKA-NGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKR 88 Query: 389 IHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTI 216 +++RVEH++ S+C +EF R N +AEAKA+G + KRQP P+ +V EG Sbjct: 89 LNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVP 148 Query: 215 ETVTPIPYD 189 +T+ P+PY+ Sbjct: 149 QTLAPVPYE 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 117 bits (292), Expect = 4e-26 Identities = 61/142 (42%), Positives = 89/142 (62%), Gaps = 2/142 (1%) Frame = -3 Query: 608 PLPEEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVE 429 P + G+ P + Y+R YK G+ V+ + +GMPHK YHG+TGRV+NVT+ A+G+ Sbjct: 17 PFRKHGVVPLAT-YMRIYKKGDIVDIKG-MGTVQKGMPHKCYHGKTGRVYNVTQHAVGIV 74 Query: 428 INKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGP 249 +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + KRQP P Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPP 134 Query: 248 KPGFMV--EGTTIETVTPIPYD 189 + V G E + PIPY+ Sbjct: 135 REAHFVRTNGKEPELLEPIPYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 116 bits (291), Expect = 5e-26 Identities = 61/142 (42%), Positives = 89/142 (62%), Gaps = 2/142 (1%) Frame = -3 Query: 608 PLPEEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVE 429 P + G+ P + Y+R YK G+ V+ + +GMPHK YHG+TGRV+NVT+ A+G+ Sbjct: 17 PYRKHGVVPLAT-YMRIYKKGDIVDIKG-MGTVQKGMPHKCYHGKTGRVYNVTQHAVGIV 74 Query: 428 INKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGP 249 +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + KRQP P Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPP 134 Query: 248 KPGFMV--EGTTIETVTPIPYD 189 + V G E + PIPY+ Sbjct: 135 REAHFVRTNGKEPELLEPIPYE 156
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 115 bits (287), Expect = 1e-25 Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 2/133 (1%) Frame = -3 Query: 581 RSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRI 402 R YL+TYKVG+ V+ + +GMPHK+YHG+TG V+NVT+ ++GV I K VGNR Sbjct: 26 RLSTYLKTYKVGDIVDIKV-NGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRY 84 Query: 401 IRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGT 222 + KR++VR+EHV+ S+C ++F R N+ + EAKA+G+ + +RQP P V Sbjct: 85 MEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTE 144 Query: 221 TIETVT--PIPYD 189 E VT P+ YD Sbjct: 145 NNEPVTLHPVAYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 115 bits (287), Expect = 1e-25 Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 2/133 (1%) Frame = -3 Query: 581 RSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRI 402 R YL+TYKVG+ V+ + +GMPHK+YHG+TG V+NVT+ ++GV I K VGNR Sbjct: 26 RLSTYLKTYKVGDIVDIKV-NGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRY 84 Query: 401 IRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGT 222 + KR++VR+EHV+ S+C ++F R N+ + EAKA+G+ + +RQP P V Sbjct: 85 MEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTE 144 Query: 221 TIETVT--PIPYD 189 E VT P+ YD Sbjct: 145 NNEPVTLHPVAYD 157
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 112 bits (279), Expect = 1e-24 Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 2/142 (1%) Frame = -3 Query: 608 PLPEEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVE 429 P + G+ P + Y+R YK G+ V+ + +GMPHK YHG+TGRV+NVT+ A+G+ Sbjct: 17 PFRKHGVVPLAT-YMRIYKKGDIVDIKG-MGTVQKGMPHKCYHGKTGRVYNVTQHAVGII 74 Query: 428 INKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGP 249 +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + QP P Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNGQPAPP 134 Query: 248 KPGFMV--EGTTIETVTPIPYD 189 + V G E + PIPY+ Sbjct: 135 REAHFVRTNGKEPELLEPIPYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 111 bits (278), Expect = 1e-24 Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 2/142 (1%) Frame = -3 Query: 608 PLPEEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVE 429 P + G+ P + Y+R YK G+ V+ + +GMPHK YHG+TGRV+NVT+ A+G+ Sbjct: 17 PFRKHGVVPLAT-YMRIYKKGDIVDIKG-MGTVQKGMPHKCYHGKTGRVYNVTQHAVGII 74 Query: 428 INKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGP 249 +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + KR P Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRHAAPP 134 Query: 248 KPGFMV--EGTTIETVTPIPYD 189 + V G E + PIPY+ Sbjct: 135 REAHFVRTNGKEPELLEPIPYE 156
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 104 bits (259), Expect = 2e-22 Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 13/139 (9%) Frame = -3 Query: 566 LRTYKVGEYVERQR*TAPCT----RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRII 399 L TYKVG+YV T C G+P+K +HG+TGRVWNV AIGV +NK+V NRI+ Sbjct: 31 LHTYKVGDYV-----TILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIV 85 Query: 398 RKRIHVRVEHVQPSRCAEEFRLRKV-------KNDQLKAEAKARGEVISTKRQPLGPKPG 240 KR+H+ EH++PS C ++F RK +N QLK E K + KR P P+P Sbjct: 86 VKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL-LPLPAKRLPKQPRPA 144 Query: 239 FMVEGTTIE--TVTPIPYD 189 +++G I+ TV P+ ++ Sbjct: 145 ELIKGADIKFTTVAPLKFE 163
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 100 bits (250), Expect = 3e-21 Identities = 53/128 (41%), Positives = 80/128 (62%), Gaps = 1/128 (0%) Frame = -3 Query: 569 YLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKR 390 YL YK G+ V+ + + PHK YHG+TGR++NVT+ A+G+ +NKQV RII KR Sbjct: 28 YLTVYKKGDIVDIKG-DGSVQKVCPHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKR 86 Query: 389 IHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTT-IE 213 I+VR+EH++ S+ F R +N++ + EA+ + ++ KRQP P+ G V + E Sbjct: 87 INVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLKRQPQQPRTGHFVRSSAEPE 146 Query: 212 TVTPIPYD 189 V PIPY+ Sbjct: 147 LVEPIPYE 154
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 98.2 bits (243), Expect = 2e-20 Identities = 50/132 (37%), Positives = 82/132 (62%), Gaps = 3/132 (2%) Frame = -3 Query: 569 YLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKR 390 Y YK G+ V+ + +GMP K YHGRTGR++NVT+ A+G+ +NK+V I+ KR Sbjct: 29 YYTQYKRGDLVDIKT-NGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKR 87 Query: 389 IHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGE-VISTKRQPLGPKPGFMV--EGTT 219 I++R+EH++PS+C +F R ND+ + AK+ G+ V + KR P+ P+ V + Sbjct: 88 INIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQNNE 147 Query: 218 IETVTPIPYDVV 183 E + P+ +++V Sbjct: 148 PELLAPLRFEIV 159
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 87.0 bits (214), Expect = 4e-17 Identities = 45/109 (41%), Positives = 75/109 (68%), Gaps = 1/109 (0%) Frame = -3 Query: 569 YLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKR 390 YL Y++G+ V+ A +GMPHK+YHGRTGRV++V R++ V + K+V + + K+ Sbjct: 29 YLEKYEIGDMVDILVNPA-MMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKK 87 Query: 389 IHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVIS-TKRQPLGPK 246 I VR+EHV+ SRC+EE + R + ++ +A++RG V++ +KR+ GP+ Sbjct: 88 IIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPR 136
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 50.8 bits (120), Expect = 3e-06 Identities = 35/94 (37%), Positives = 49/94 (52%) Frame = -3 Query: 617 VRAPLPEEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAI 438 +R P+ E+G PR YLR Y+VG+ V + GMPH+ +HG TG V V KR Sbjct: 16 LRKPVREKGSIPRLSTYLREYRVGDKVAIIINPSFPDWGMPHRRFHGLTGTV--VGKRGE 73 Query: 437 GVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 336 E+ +G + RK + V H++P A E R Sbjct: 74 AYEVEVYLGRK--RKTLFVPPVHLKPLSTAAERR 105
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/80 (33%), Positives = 41/80 (51%) Frame = -3 Query: 599 EEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINK 420 E+G P+ + Y GEYV + +GMPH+ YHG+ G V V KR E+ Sbjct: 22 EKGAIPKLSLLMHDYSQGEYVV-VKINPSIHKGMPHRRYHGKVGLV--VGKRGKAYEVKV 78 Query: 419 QVGNRIIRKRIHVRVEHVQP 360 +G++ + + VR EH+ P Sbjct: 79 NIGDK--ERVLIVRPEHLIP 96
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 36.6 bits (83), Expect = 0.061 Identities = 29/81 (35%), Positives = 42/81 (51%) Frame = -3 Query: 599 EEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINK 420 E GL+P + LR +K GEYV +GMPH +HGRTG V RA V++ Sbjct: 22 ERGLYPITRA-LREFKEGEYVHIVI-DPSVHKGMPHPRFHGRTGIVVGKQGRAFIVKVRD 79 Query: 419 QVGNRIIRKRIHVRVEHVQPS 357 G + K+I +H++P+ Sbjct: 80 --GGKY--KQIIAYPQHLRPA 96
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 36.2 bits (82), Expect = 0.079 Identities = 29/86 (33%), Positives = 46/86 (53%) Frame = -3 Query: 617 VRAPLPEEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAI 438 +R + E+G+ R +L+T+ VG+ V A +GMPH + GRTG V RA Sbjct: 16 LRKKVREKGVRIRK--FLQTFDVGQRVHIDIEPAS-QKGMPHPRFQGRTGVVIGQRGRAY 72 Query: 437 GVEINKQVGNRIIRKRIHVRVEHVQP 360 V++ G ++ K + VR EH++P Sbjct: 73 LVQVRD--GGKM--KTLIVRPEHLKP 94
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 35.8 bits (81), Expect = 0.10 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = -3 Query: 608 PLPEEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTG 468 P + G+ P + Y+R YK G+ V+ + +G+PHK YHG+TG Sbjct: 17 PFRKHGVVPLAT-YMRIYKKGDIVDIKG-MGTVQKGLPHKCYHGKTG 61
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 35.0 bits (79), Expect = 0.18 Identities = 25/78 (32%), Positives = 38/78 (48%) Frame = -3 Query: 599 EEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINK 420 E G PR + +K G+YV + +GMPH+ YHG+ G + KR + Sbjct: 22 ERGAVPRLSLLMEEFKEGDYVVIKI-NPSVHKGMPHRRYHGKVGVIQG--KRGKAYIVRV 78 Query: 419 QVGNRIIRKRIHVRVEHV 366 +G++ K I VR EH+ Sbjct: 79 TLGDK--EKVIIVRPEHL 94
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 35.0 bits (79), Expect = 0.18 Identities = 22/54 (40%), Positives = 29/54 (53%) Frame = -3 Query: 506 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAE 345 +GMPH YHGRTG V RA V+I G + K++ V EH++P E Sbjct: 51 KGMPHPRYHGRTGEVVGRQGRAYIVKIRD--GGK--EKKLIVYPEHLKPQEQPE 100
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 33.9 bits (76), Expect = 0.39 Identities = 19/48 (39%), Positives = 29/48 (60%) Frame = -3 Query: 506 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQ 363 RG PH +HG+TGRV + ++ V + GN+ K++ VR EH+Q Sbjct: 50 RGQPHPRFHGKTGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHLQ 93
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 32.7 bits (73), Expect = 0.87 Identities = 24/80 (30%), Positives = 39/80 (48%) Frame = -3 Query: 599 EEGLHPRSPPYLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEINK 420 E G P + YK G+ V + +GMPH+ Y G+ G++ + KR ++ Sbjct: 22 ERGAVPSLSKLMVEYKEGDNVV-VKINPSVHQGMPHRRYQGKVGKI--IGKRGRAYLVSV 78 Query: 419 QVGNRIIRKRIHVRVEHVQP 360 +G++ K I VR EH+ P Sbjct: 79 TLGDK--EKVIIVRPEHLVP 96
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 32.0 bits (71), Expect = 1.5 Identities = 31/143 (21%), Positives = 52/143 (36%) Frame = -1 Query: 550 SASTSNVKGERRRAQGVCRTSSTTAAPDACGXXXXXXXXXXXXXRLETASSGKGSMSVLS 371 S+S S+ + +++TT +P + ++SS S S S Sbjct: 129 SSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 188 Query: 370 MCSHPGVLRSSA*GK*RMTSSRRKPRHVVRSSAPRGSHSALNPGSWSRVPQSRPSLPFLM 191 S SS SS V +S+ SHS+ + S S SRPS Sbjct: 189 SSSSSSSSSSS--------SSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSF 240 Query: 190 MWSMISRVVTRVFGLSACTTSSN 122 + +M S ++ ++SS+ Sbjct: 241 ITTMSSSTFISTVTVTPSSSSSS 263
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 31.6 bits (70), Expect = 1.9 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Frame = -3 Query: 587 HPRS---PP---YLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEI 426 HPR PP +L+ ++VG+ V +GMP +HGRTG V V KR + Sbjct: 19 HPRRRGLPPLTRFLQEFEVGQKVHIVI-EPSYHKGMPDPRFHGRTGTV--VGKRGDAYIV 75 Query: 425 NKQVGNRIIRKRIHVRVEHVQPSR 354 GN++ K + + H++P + Sbjct: 76 EVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 31.6 bits (70), Expect = 1.9 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Frame = -3 Query: 587 HPRS---PP---YLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEI 426 HPR PP +L+ ++VG+ V +GMP +HGRTG V V KR + Sbjct: 19 HPRRRGLPPLTRFLQEFEVGQRVHIVI-EPSYHKGMPDPRFHGRTGTV--VGKRGDAYIV 75 Query: 425 NKQVGNRIIRKRIHVRVEHVQPSR 354 GN++ K + + H++P + Sbjct: 76 EVPDGNKV--KTLFIHPVHLRPQK 97
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 31.2 bits (69), Expect = 2.5 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -3 Query: 410 NRIIRKRIHVRVEHVQPSRCAEEFRLR 330 NRI +RIH+ +H Q ++C E FR R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>VPRT_JSRV (P31625) Bifunctional protease/dUTPase [Includes: Aspartic protease| (EC 3.4.23.-); Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23) (dUTPase) (dUTP pyrophosphatase)] Length = 326 Score = 30.0 bits (66), Expect = 5.7 Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 12/115 (10%) Frame = -1 Query: 616 FARPFRKKGYIPAHHPTCAPTRSASTSNVKGERRRAQGVCRTSSTTAAPDACGXXXXXXX 437 FA F K G PA P + N G +R +CR + +A D C Sbjct: 20 FAPGFGKLGEGPAPGP-----ETMLWGNTAGSKRTIADLCRATRGSAGLDLCATSYTVLT 74 Query: 436 XXXXXXRLETASSG------------KGSMSVLSMCSHPGVLRSSA*GK*RMTSS 308 L T G + S S+ + HPGV+ S G+ ++ +S Sbjct: 75 PEMGVQTLATGVFGPLPPGTVGLLLGRSSASLKGILIHPGVIDSDYTGEIKILAS 129
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 30.0 bits (66), Expect = 5.7 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 271 PRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVV 164 P GS +A R+P +RP P L W +SR++ Sbjct: 893 PEGSEAAEEAAPSDRMPSARPPSPPLSSWERVSRLM 928
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 30.0 bits (66), Expect = 5.7 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Frame = -3 Query: 587 HPRS---PP---YLRTYKVGEYVERQR*TAPCTRGMPHKFYHGRTGRVWNVTKRAIGVEI 426 HPR PP +L+ ++VG+ V +GMP +HGRTG V V KR + Sbjct: 19 HPRRRGLPPLTRFLQEFEVGQRVHIVI-EPSYHKGMPDPRFHGRTGTV--VGKRGEAYIV 75 Query: 425 NKQVGNRIIRKRIHVRVEHVQPSR 354 + G+++ K + + H++P + Sbjct: 76 EIKDGSKV--KTLFIHPVHLRPQK 97
>HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 7.4 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 374 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 195 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLTMPTTVDGCVRTP 194 Query: 194 YDVVNDLKGGY 162 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 7.4 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 374 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 195 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 194 YDVVNDLKGGY 162 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 7.4 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 374 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 195 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 194 YDVVNDLKGGY 162 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondrial precursor| (Cytochrome oxidase biogenesis protein 1-1) (Sp1) Length = 374 Score = 29.3 bits (64), Expect = 9.7 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 301 SALSWSFFTFLRRNSSAHLDGCTCSTRTWILFLMMRFPTCLL 426 SA+ +SFF +R+ S +DG T W L + P C+L Sbjct: 170 SAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCIL 211
>HN_PI3HW (P12565) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.3 bits (64), Expect = 9.7 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 374 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 195 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 194 YDVVNDLKGGY 162 V+NDL Y Sbjct: 195 SLVINDLIYAY 205 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,740,848 Number of Sequences: 219361 Number of extensions: 2006558 Number of successful extensions: 5675 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5428 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5660 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
