>AAPC_PENCL (Q40784) Putative apospory-associated protein C|
          Length = 329

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
 Frame = -2

Query: 338 EERKKRIYNTAPSKFTTIDQSSGLGFRLVRMGFEDMYLGSPGGMYDKFGNDY-------F 180
           E    ++Y  APSK   ID      F + + G  D  + +P     K   D+        
Sbjct: 224 ESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWNPWDKKAKAMQDFGDAEYKNM 283

Query: 179 LCTGPASILVPVVVGPGEEWRG 114
           LC  PA++  P+ + PGEEWRG
Sbjct: 284 LCVEPAAVEKPITLKPGEEWRG 305

>GATA3_CHICK (P23825) GATA-binding factor 3 (GATA-3) (Transcription factor|
           NF-E1C)
          Length = 444

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +1

Query: 67  HHQKKSYKLSCSMTCAPLHSSPGPTTTGTRMDAGPVQRK*SLPNLSYIPPGLPRYMSSNP 246
           HH    + LS     +  HSSPGP +      +  +    S P+L   PP  P+ +S +P
Sbjct: 106 HHSASPWNLSPFSKTSIHHSSPGPLSVYPPASSSTLSAGHSSPHLFTFPPTPPKDVSPDP 165

Query: 247 ILTS 258
            +++
Sbjct: 166 SIST 169

>GATA3_MOUSE (P23772) Trans-acting T-cell-specific transcription factor GATA-3|
           (GATA-binding factor 3)
          Length = 443

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +1

Query: 67  HHQKKSYKLSCSMTCAPLHSSPGPTTTGTRMDAGPVQRK*SLPNLSYIPPGLPRYMSSNP 246
           HH    + LS     +  H SPGP +      +  +    S P+L   PP  P+ +S +P
Sbjct: 105 HHTASPWNLSPFSKTSIHHGSPGPLSVYPPASSSSLAAGHSSPHLFTFPPTPPKDVSPDP 164

Query: 247 ILTS 258
            L++
Sbjct: 165 SLST 168

>GATA3_BRARE (Q91428) Transcription factor GATA-3 (GATA-binding factor 3)|
          Length = 438

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = +1

Query: 67  HHQKKSYKLSCSMTCAPLHSSPGPTTTGTRMDAGPVQRK*SLPNLSYIPPGLPRYMSSNP 246
           HH    + L      +  HSSPGP +      +  +    S P+L   PP  P+ +S +P
Sbjct: 99  HHSTSPWNLGPFPKTSLHHSSPGPLSVYPPASSSSLSAGHSSPHLFTFPPTPPKDVSPDP 158

Query: 247 ILTS 258
            +++
Sbjct: 159 AIST 162

>GATA3_HUMAN (P23771) Trans-acting T-cell-specific transcription factor GATA-3|
           (GATA-binding factor 3)
          Length = 443

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = +1

Query: 67  HHQKKSYKLSCSMTCAPLHSSPGPTTTGTRMDAGPVQRK*SLPNLSYIPPGLPRYMSSNP 246
           HH    + LS     +  H SPGP +      +  +    + P+L   PP  P+ +S +P
Sbjct: 106 HHTASPWNLSPFSKTSIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDP 165

Query: 247 ILTS 258
            L++
Sbjct: 166 SLST 169

>YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon Tn4556|
          Length = 395

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 228 VHVLEPHPHKPEPQPARLVD 287
           +H+   HPH+P PQP +L D
Sbjct: 248 LHLRTRHPHRPAPQPVQLRD 267

>DLG1_DROME (P31007) Discs large 1 tumor suppressor protein|
          Length = 970

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
 Frame = +1

Query: 88  KLSCSMTCAPLHSSPGPTTTGTRMDAGPVQRK*SLPNLSYIPPGLPRYMSS-------NP 246
           +L+ S + + +H     T         P  R  S   L+ +PPG PR +S+         
Sbjct: 447 QLATSQSQSQVHQQQHATPMVNSQSTEPGSRYASTNVLAAVPPGTPRAVSTEDITREPRT 506

Query: 247 ILTSLNPSPLDWSMVVNLEGAVL*MRFFLSSGGA 348
           I     P  L +++V   +G  + + F L+ G A
Sbjct: 507 ITIQKGPQGLGFNIVGGEDGQGIYVSFILAGGPA 540

>PGCA_CHICK (P07898) Aggrecan core protein precursor (Cartilage-specific|
           proteoglycan core protein) (CSPCP)
          Length = 2109

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -2

Query: 356 VYAAPPEERKKRIYNTAPSKFT---TIDQSSGLGFRLVRMGFEDMYLGSPGGM 207
           VY    + + K  Y T+P KFT     D+   LG RL   G  ++YL    GM
Sbjct: 240 VYCYAEQMQGKVFYATSPEKFTFQEAFDKCHSLGARLATTG--ELYLAWKDGM 290

>Y8049_RHOBA (Q7UG92) UPF0168 protein RB8049|
          Length = 156

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 374 KKKVSRVYAAPPEERKKRIYNTAPSKFTTIDQSSGLGFRLVR 249
           K + SR   A    R+KR+  T   +FTT++Q   L  R+V+
Sbjct: 12  KVQDSRTAEAGYVVRRKRLCQTCQRRFTTLEQIDALNVRVVK 53

>AT2B1_RABIT (Q00804) Plasma membrane calcium-transporting ATPase 1 (EC 3.6.3.8)|
           (PMCA1) (Plasma membrane calcium pump isoform 1)
          Length = 1249

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 22/84 (26%), Positives = 36/84 (42%)
 Frame = -2

Query: 380 ILKKKVSRVYAAPPEERKKRIYNTAPSKFTTIDQSSGLGFRLVRMGFEDMYLGSPGGMYD 201
           I+ KK  ++ +A  E +  R  +      T I+  +  G R + + F D   G P   +D
Sbjct: 606 IILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAGEPEPEWD 665

Query: 200 KFGNDYFLCTGPASILVPVVVGPG 129
              N+  + TG   I V  +  PG
Sbjct: 666 ---NENDIVTGLTCIAVVGIEDPG 686


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,994,714
Number of Sequences: 219361
Number of extensions: 995890
Number of successful extensions: 3215
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3211
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)