>MUTS_CHLAB (Q5L554) DNA mismatch repair protein mutS|
          Length = 826

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 597 HINGLDDLEDHLPCMDTFGASSSSRHNRPLFMY 695
           H   L DLE+H P ++ F AS      +P+F+Y
Sbjct: 738 HYKELTDLENHCPHVENFHASVKENGGQPVFLY 770

>FADJ_PHOPR (Q6LTK3) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 715

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
 Frame = -2

Query: 436 ITSLDELKTKVGHVIVMILLVKMFERSKMVKITTGLDLLSYSVCIFLSSASLYILHNLHR 257
           IT LDE+   +G  I  ILL ++ ER K   +    DLL         S   + L+N  +
Sbjct: 546 ITLLDEVGVDIGAKISPILLAELGERFKAPDV---FDLLLSDDRKGRKSGKGFYLYNTKK 602

Query: 256 PEHEESVMPHL*LNRASRSS-DAMASWCSCRLVSD--RCID 143
            E ++SV   L L    +++   +A  C+  ++++  RC+D
Sbjct: 603 KEVDKSVYKLLSLEPEQKAAGQDIALRCTLMMLNEAARCLD 643

>MUTS_CHLPN (Q9Z6W5) DNA mismatch repair protein mutS|
          Length = 828

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 597 HINGLDDLEDHLPCMDTFGASSSSRHNRPLFMY 695
           H   L  LEDH P ++ F A    +  +P+F+Y
Sbjct: 740 HYKELTTLEDHCPHVENFHAGVKDKAGQPVFLY 772


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,879,093
Number of Sequences: 219361
Number of extensions: 1984839
Number of successful extensions: 6234
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6233
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)