ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3k14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467536.1| Oryza sativa (japonica cultivar-group), mRNA 341 2e-90
2gb|AY104650.1| Zea mays PCO104630 mRNA sequence 299 6e-78
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 236 7e-59
4dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic D... 236 7e-59
5dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic D... 236 7e-59
6dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone... 62 2e-06
7ref|XM_363983.1| Magnaporthe grisea 70-15 hypothetical protein (... 48 0.035
8emb|BX255935.27| Zebrafish DNA sequence from clone DKEYP-46H4 in... 42 2.2
9gb|AC008115.4| Homo sapiens 12 BAC RP11-180M15 (Roswell Park Can... 42 2.2
10emb|CR385078.23| Zebrafish DNA sequence from clone DKEYP-104F11 ... 42 2.2
11emb|AL929029.7| Zebrafish DNA sequence from clone CH211-15F21, c... 42 2.2
12emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2... 42 2.2
13ref|NM_126079.2| Arabidopsis thaliana unknown protein AT5G66810 ... 40 8.5
14ref|NM_001035385.1| Bos taurus olfactomedin-like 1 (OLFML1), mRNA 40 8.5
15ref|NM_191472.1| Oryza sativa (japonica cultivar-group), predic... 40 8.5
16gb|AC004620.1| Homo sapiens chromosome 5, PAC clone 66p19 (LBNL ... 40 8.5
17gb|AC005593.1| Homo sapiens chromosome 5, P1 clone 1369f10 (LBNL... 40 8.5
18gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.5
20gb|AC006392.1| Homo sapiens BAC clone RP11-520M18 from 7, comple... 40 8.5
21emb|CR339042.13| Zebrafish DNA sequence from clone CH211-268L18 ... 40 8.5
22gb|AC121570.4| Mus musculus BAC clone RP23-228G6 from 16, comple... 40 8.5
23emb|CR732861.2|CNS0GSEL Tetraodon nigroviridis full-length cDNA 40 8.5
24emb|CR732377.2|CNS0GS1Q Tetraodon nigroviridis full-length cDNA 40 8.5
25emb|CR651783.2|CNS0F1VX Tetraodon nigroviridis full-length cDNA 40 8.5
26emb|CR649634.2|CNS0F088 Tetraodon nigroviridis full-length cDNA 40 8.5
27emb|CR639954.2|CNS0ESRC Tetraodon nigroviridis full-length cDNA 40 8.5
28emb|CR634829.2|CNS0EOSZ Tetraodon nigroviridis full-length cDNA 40 8.5
29emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 o... 40 8.5
30gb|BC109584.1| Bos taurus olfactomedin-like 1, mRNA (cDNA clone ... 40 8.5
31emb|AL596325.5| Human DNA sequence from clone RP11-359K18 on chr... 40 8.5
32emb|AL050321.11|HSJ717M23 Human DNA sequence from clone RP4-717M... 40 8.5
33gb|AC105057.7| Homo sapiens 3 BAC RP11-543P4 (Roswell Park Cance... 40 8.5
34emb|BX950184.7| Zebrafish DNA sequence from clone CH211-103O12 i... 40 8.5
35emb|AL833181.1|HSM804492 Homo sapiens mRNA; cDNA DKFZp667E155 (f... 40 8.5
36gb|AC074194.6| Homo sapiens BAC clone RP11-739P1 from 4, complet... 40 8.5
37gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, com... 40 8.5
38gb|AC008695.9|AC008695 Homo sapiens chromosome 5 clone CTB-6P6, ... 40 8.5
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
40dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
42gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, comple... 40 8.5
43gb|AC106875.5| Homo sapiens BAC clone RP11-494G9 from 2, complet... 40 8.5
44gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
45dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
46dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.5
47gb|BT021753.1| Bos taurus olfactomedin-like 1 (OLFML1), mRNA, co... 40 8.5
48gb|AC155268.1| Mus musculus BAC clone RP23-204K22 from 16, compl... 40 8.5
49emb|AL845282.12| Zebrafish DNA sequence from clone DKEY-28P18 in... 40 8.5
50emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on ch... 40 8.5 
>ref|XM_467536.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1026

 Score =  341 bits (172), Expect = 2e-90
 Identities = 238/260 (91%)
 Strand = Plus / Minus

                                                                        
Query: 368  ttacccccttgtcttggccctcttcattccaaggctgttgtggaaaggggatgcggaacc 427
            ||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 1026 ttacccccttgtcttcgccctcttcattccaaggctgttgtggaaaggggaagctgagcc 967

                                                                        
Query: 428  agatctttgcatcccttcttcacggagggtgccgttgagcattgcaagctcccggagctg 487
            ||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 966  agatctttgcatcccttcttcacggagggtgccattgagcatggcgagttcccggagctg 907

                                                                        
Query: 488  ctgcttcttgaagaagtcctgagactcgtccattggccttaacagatcctcaaggatctc 547
            ||||||||||||||||||||||||||||||||  ||| | | |||||| |||||||| ||
Sbjct: 906  ctgcttcttgaagaagtcctgagactcgtccacaggcttcagcagatcttcaaggatatc 847

                                                                        
Query: 548  acgggcttgcatcagacgagcatcaataatttcaacaggcagctctgcctcaaccaatat 607
            ||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||
Sbjct: 846  acgggcttggatcagacgggtatcaataatttcaacaggcagttctgcctcaaccaatat 787

                                
Query: 608  atgtaggggttcattaagat 627
             || ||||||||||| ||||
Sbjct: 786  gtgcaggggttcattcagat 767
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>gb|AY104650.1| Zea mays PCO104630 mRNA sequence
          Length = 1431

 Score =  299 bits (151), Expect = 6e-78
 Identities = 229/255 (89%)
 Strand = Plus / Minus

                                                                       
Query: 368 ttacccccttgtcttggccctcttcattccaaggctgttgtggaaaggggatgcggaacc 427
           |||||||||||||||||| |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 985 ttacccccttgtcttggctctcttcatcccaaggctgttgtggaaaggggacgctgaacc 926

                                                                       
Query: 428 agatctttgcatcccttcttcacggagggtgccgttgagcattgcaagctcccggagctg 487
            ||||| ||||||||||| ||||| |||||||| || ||||| ||||||||||| |||||
Sbjct: 925 ggatctctgcatcccttcctcacgaagggtgccattaagcatcgcaagctcccgtagctg 866

                                                                       
Query: 488 ctgcttcttgaagaagtcctgagactcgtccattggccttaacagatcctcaaggatctc 547
           ||||||||||||| ||||||| || |||||||  ||| ||| |||||| |||||||||||
Sbjct: 865 ctgcttcttgaagtagtcctgggattcgtccacaggctttagcagatcttcaaggatctc 806

                                                                       
Query: 548 acgggcttgcatcagacgagcatcaataatttcaacaggcagctctgcctcaaccaatat 607
            |||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 805 gcgggcttgcatcaggcgcgcatcaatgatttcaacaggtagctctgcctcaaccaatat 746

                          
Query: 608 atgtaggggttcatt 622
           ||| |||||||||||
Sbjct: 745 atggaggggttcatt 731
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  236 bits (119), Expect = 7e-59
 Identities = 143/151 (94%)
 Strand = Plus / Minus

                                                                            
Query: 368      ttacccccttgtcttggccctcttcattccaaggctgttgtggaaaggggatgcggaacc 427
                ||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 30033668 ttacccccttgtcttcgccctcttcattccaaggctgttgtggaaaggggaagctgagcc 30033609

                                                                            
Query: 428      agatctttgcatcccttcttcacggagggtgccgttgagcattgcaagctcccggagctg 487
                ||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 30033608 agatctttgcatcccttcttcacggagggtgccattgagcatggcgagttcccggagctg 30033549

                                               
Query: 488      ctgcttcttgaagaagtcctgagactcgtcc 518
                |||||||||||||||||||||||||||||||
Sbjct: 30033548 ctgcttcttgaagaagtcctgagactcgtcc 30033518



 Score =  123 bits (62), Expect = 7e-25
 Identities = 89/98 (90%)
 Strand = Plus / Minus

                                                                            
Query: 530      cagatcctcaaggatctcacgggcttgcatcagacgagcatcaataatttcaacaggcag 589
                |||||| |||||||| ||||||||||| |||||||| | |||||||||||||||||||||
Sbjct: 30033382 cagatcttcaaggatatcacgggcttggatcagacgggtatcaataatttcaacaggcag 30033323

                                                      
Query: 590      ctctgcctcaaccaatatatgtaggggttcattaagat 627
                 ||||||||||||||||| || ||||||||||| ||||
Sbjct: 30033322 ttctgcctcaaccaatatgtgcaggggttcattcagat 30033285



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                            
Query: 229      gtattatcaagtacgggctgctccgatgctagcggtgcgagaccatttttgcgccattag 288
                |||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||| ||
Sbjct: 30033810 gtattatcaagtacgggccgctccgatgctggcggtgcgagaccgtttttgggccatcag 30033751

                                           
Query: 289      ccacgaaggcagacccataggcatact 315
                |||  ||||||  ||||||||||||||
Sbjct: 30033750 ccagcaaggcaaccccataggcatact 30033724



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                          
Query: 94       atcaaaaccccagtcat-agctcatagcaatacacaaaccac 134
                |||||||||||||  || || |||||||||||||||||||||
Sbjct: 30033961 atcaaaaccccagatatcagttcatagcaatacacaaaccac 30033920
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>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0685G12
          Length = 149155

 Score =  236 bits (119), Expect = 7e-59
 Identities = 143/151 (94%)
 Strand = Plus / Minus

                                                                         
Query: 368   ttacccccttgtcttggccctcttcattccaaggctgttgtggaaaggggatgcggaacc 427
             ||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 13265 ttacccccttgtcttcgccctcttcattccaaggctgttgtggaaaggggaagctgagcc 13206

                                                                         
Query: 428   agatctttgcatcccttcttcacggagggtgccgttgagcattgcaagctcccggagctg 487
             ||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 13205 agatctttgcatcccttcttcacggagggtgccattgagcatggcgagttcccggagctg 13146

                                            
Query: 488   ctgcttcttgaagaagtcctgagactcgtcc 518
             |||||||||||||||||||||||||||||||
Sbjct: 13145 ctgcttcttgaagaagtcctgagactcgtcc 13115



 Score =  123 bits (62), Expect = 7e-25
 Identities = 89/98 (90%)
 Strand = Plus / Minus

                                                                         
Query: 530   cagatcctcaaggatctcacgggcttgcatcagacgagcatcaataatttcaacaggcag 589
             |||||| |||||||| ||||||||||| |||||||| | |||||||||||||||||||||
Sbjct: 12979 cagatcttcaaggatatcacgggcttggatcagacgggtatcaataatttcaacaggcag 12920

                                                   
Query: 590   ctctgcctcaaccaatatatgtaggggttcattaagat 627
              ||||||||||||||||| || ||||||||||| ||||
Sbjct: 12919 ttctgcctcaaccaatatgtgcaggggttcattcagat 12882



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                         
Query: 229   gtattatcaagtacgggctgctccgatgctagcggtgcgagaccatttttgcgccattag 288
             |||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||| ||
Sbjct: 13407 gtattatcaagtacgggccgctccgatgctggcggtgcgagaccgtttttgggccatcag 13348

                                        
Query: 289   ccacgaaggcagacccataggcatact 315
             |||  ||||||  ||||||||||||||
Sbjct: 13347 ccagcaaggcaaccccataggcatact 13321



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                       
Query: 94    atcaaaaccccagtcat-agctcatagcaatacacaaaccac 134
             |||||||||||||  || || |||||||||||||||||||||
Sbjct: 13558 atcaaaaccccagatatcagttcatagcaatacacaaaccac 13517
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>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0654B04
          Length = 156907

 Score =  236 bits (119), Expect = 7e-59
 Identities = 143/151 (94%)
 Strand = Plus / Minus

                                                                          
Query: 368    ttacccccttgtcttggccctcttcattccaaggctgttgtggaaaggggatgcggaacc 427
              ||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 133944 ttacccccttgtcttcgccctcttcattccaaggctgttgtggaaaggggaagctgagcc 133885

                                                                          
Query: 428    agatctttgcatcccttcttcacggagggtgccgttgagcattgcaagctcccggagctg 487
              ||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 133884 agatctttgcatcccttcttcacggagggtgccattgagcatggcgagttcccggagctg 133825

                                             
Query: 488    ctgcttcttgaagaagtcctgagactcgtcc 518
              |||||||||||||||||||||||||||||||
Sbjct: 133824 ctgcttcttgaagaagtcctgagactcgtcc 133794



 Score =  123 bits (62), Expect = 7e-25
 Identities = 89/98 (90%)
 Strand = Plus / Minus

                                                                          
Query: 530    cagatcctcaaggatctcacgggcttgcatcagacgagcatcaataatttcaacaggcag 589
              |||||| |||||||| ||||||||||| |||||||| | |||||||||||||||||||||
Sbjct: 133658 cagatcttcaaggatatcacgggcttggatcagacgggtatcaataatttcaacaggcag 133599

                                                    
Query: 590    ctctgcctcaaccaatatatgtaggggttcattaagat 627
               ||||||||||||||||| || ||||||||||| ||||
Sbjct: 133598 ttctgcctcaaccaatatgtgcaggggttcattcagat 133561



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                          
Query: 229    gtattatcaagtacgggctgctccgatgctagcggtgcgagaccatttttgcgccattag 288
              |||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||| ||
Sbjct: 134086 gtattatcaagtacgggccgctccgatgctggcggtgcgagaccgtttttgggccatcag 134027

                                         
Query: 289    ccacgaaggcagacccataggcatact 315
              |||  ||||||  ||||||||||||||
Sbjct: 134026 ccagcaaggcaaccccataggcatact 134000



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                        
Query: 94     atcaaaaccccagtcat-agctcatagcaatacacaaaccac 134
              |||||||||||||  || || |||||||||||||||||||||
Sbjct: 134237 atcaaaaccccagatatcagttcatagcaatacacaaaccac 134196
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>dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06J16, TM0083,
              complete sequence
          Length = 120016

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                          
Query: 456    gtgccgttgagcattgcaagctcccggagctgctgcttcttgaagaagtcctgagactcg 515
              ||||| ||||||| ||| || ||||| ||||||||||||||| || |||||||||| |||
Sbjct: 104308 gtgccattgagcagtgctagttcccgaagctgctgcttcttgtagtagtcctgagattcg 104249

                 
Query: 516    tcc 518
              |||
Sbjct: 104248 tcc 104246



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                        
Query: 368    ttacccccttgtcttggccctcttcattccaaggctgttgtg 409
              ||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 104396 ttaccccctggtcttggcccttttcataccaaggctgttgtg 104355
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>ref|XM_363983.1| Magnaporthe grisea 70-15 hypothetical protein (MG08828.4) partial
           cds
          Length = 954

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 54  aaattcttcaaaagttcaaatacaagcacaagaacc 89
           |||||||  |||||||||| ||||||||||||||||
Sbjct: 71  aaattctcgaaaagttcaactacaagcacaagaacc 106
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>emb|BX255935.27| Zebrafish DNA sequence from clone DKEYP-46H4 in linkage group 14,
            complete sequence
          Length = 163552

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 10   tgtaacaaattacaacatttc 30
            |||||||||||||||||||||
Sbjct: 5079 tgtaacaaattacaacatttc 5099
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>gb|AC008115.4| Homo sapiens 12 BAC RP11-180M15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 157892

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 354   gtactcatggccttttacccc 374
             |||||||||||||||||||||
Sbjct: 11412 gtactcatggccttttacccc 11392
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>emb|CR385078.23| Zebrafish DNA sequence from clone DKEYP-104F11 in linkage group 20,
            complete sequence
          Length = 182152

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 10   tgtaacaaattacaacatttc 30
            |||||||||||||||||||||
Sbjct: 4188 tgtaacaaattacaacatttc 4208
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>emb|AL929029.7| Zebrafish DNA sequence from clone CH211-15F21, complete sequence
          Length = 192579

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    tgtaacaaattacaacatttc 30
             |||||||||||||||||||||
Sbjct: 70154 tgtaacaaattacaacatttc 70134
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>emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2190G12 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 157120

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      tactataactgtaacaaatta 21
              |||||||||||||||||||||
Sbjct: 125077 tactataactgtaacaaatta 125097
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>ref|NM_126079.2| Arabidopsis thaliana unknown protein AT5G66810 mRNA, complete cds
          Length = 2398

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 accaaacctctccagtagca 206
           ||||||||||||||||||||
Sbjct: 617 accaaacctctccagtagca 636
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>ref|NM_001035385.1| Bos taurus olfactomedin-like 1 (OLFML1), mRNA
          Length = 2084

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 gctgctgcttcttgaagaag 503
           ||||||||||||||||||||
Sbjct: 338 gctgctgcttcttgaagaag 319
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>ref|NM_191472.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 525  cttaacagatcctcaaggat 544
            ||||||||||||||||||||
Sbjct: 1571 cttaacagatcctcaaggat 1552
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>gb|AC004620.1| Homo sapiens chromosome 5, PAC clone 66p19 (LBNL H84), complete
             sequence
          Length = 49021

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   gctgctgcttcttgaagaag 503
             ||||||||||||||||||||
Sbjct: 47705 gctgctgcttcttgaagaag 47686
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>gb|AC005593.1| Homo sapiens chromosome 5, P1 clone 1369f10 (LBNL H28), complete
           sequence
          Length = 83666

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 gctgctgcttcttgaagaag 503
           ||||||||||||||||||||
Sbjct: 799 gctgctgcttcttgaagaag 780
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>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22,
              complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 571    caataatttcaacaggcagc 590
              ||||||||||||||||||||
Sbjct: 117425 caataatttcaacaggcagc 117406
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 400      ggctgttgtggaaaggggat 419
                ||||||||||||||||||||
Sbjct: 11361973 ggctgttgtggaaaggggat 11361992
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>gb|AC006392.1| Homo sapiens BAC clone RP11-520M18 from 7, complete sequence
          Length = 117381

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 590   ctctgcctcaaccaatatat 609
             ||||||||||||||||||||
Sbjct: 11864 ctctgcctcaaccaatatat 11883
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>emb|CR339042.13| Zebrafish DNA sequence from clone CH211-268L18 in linkage group 21,
             complete sequence
          Length = 176058

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   agcatcaataatttcaacag 585
             ||||||||||||||||||||
Sbjct: 25774 agcatcaataatttcaacag 25793
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>gb|AC121570.4| Mus musculus BAC clone RP23-228G6 from 16, complete sequence
          Length = 184174

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   ataaccaaacctctccagta 203
             ||||||||||||||||||||
Sbjct: 42287 ataaccaaacctctccagta 42268
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>emb|CR732861.2|CNS0GSEL Tetraodon nigroviridis full-length cDNA
          Length = 509

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 ggctgctccgatgctagcgg 263
           ||||||||||||||||||||
Sbjct: 233 ggctgctccgatgctagcgg 214
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>emb|CR732377.2|CNS0GS1Q Tetraodon nigroviridis full-length cDNA
          Length = 509

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 ggctgctccgatgctagcgg 263
           ||||||||||||||||||||
Sbjct: 233 ggctgctccgatgctagcgg 214
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>emb|CR651783.2|CNS0F1VX Tetraodon nigroviridis full-length cDNA
          Length = 853

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 ggctgctccgatgctagcgg 263
           ||||||||||||||||||||
Sbjct: 219 ggctgctccgatgctagcgg 200
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>emb|CR649634.2|CNS0F088 Tetraodon nigroviridis full-length cDNA
          Length = 1370

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 ggctgctccgatgctagcgg 263
           ||||||||||||||||||||
Sbjct: 983 ggctgctccgatgctagcgg 964
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>emb|CR639954.2|CNS0ESRC Tetraodon nigroviridis full-length cDNA
          Length = 1121

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 ggctgctccgatgctagcgg 263
           ||||||||||||||||||||
Sbjct: 735 ggctgctccgatgctagcgg 716
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>emb|CR634829.2|CNS0EOSZ Tetraodon nigroviridis full-length cDNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 ggctgctccgatgctagcgg 263
           ||||||||||||||||||||
Sbjct: 984 ggctgctccgatgctagcgg 965
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>emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 on chromosome X, complete
             sequence
          Length = 107677

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aattcttcaaaagttcaaat 74
             ||||||||||||||||||||
Sbjct: 56058 aattcttcaaaagttcaaat 56039
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>gb|BC109584.1| Bos taurus olfactomedin-like 1, mRNA (cDNA clone MGC:133781
           IMAGE:8058185), complete cds
          Length = 1199

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 gctgctgcttcttgaagaag 503
           ||||||||||||||||||||
Sbjct: 369 gctgctgcttcttgaagaag 350
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>emb|AL596325.5| Human DNA sequence from clone RP11-359K18 on chromosome 1 Contains
              ubiquinol-cytochrome c reductase binding (UQCRB)
              pseudogene, the UAP1 gene for UDP-N-acteylglucosamine
              pyrophosphorylase 1,  the 5' end of the DDR2 gene for
              discoidin domain receptor family member 2 and a CpG island,
              complete sequence
          Length = 152770

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     aacatttcaagcccaaataa 42
              ||||||||||||||||||||
Sbjct: 138214 aacatttcaagcccaaataa 138195
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>emb|AL050321.11|HSJ717M23 Human DNA sequence from clone RP4-717M23 on chromosome 20 Contains
           the CSRP2BP gene for CSRP2 binding protein, a chromosome
           7 open reading frame 24 (C7orf24) pseudogene and two CpG
           islands, complete sequence
          Length = 101589

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 28  ttcaagcccaaataacataa 47
           ||||||||||||||||||||
Sbjct: 179 ttcaagcccaaataacataa 198
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>gb|AC105057.7| Homo sapiens 3 BAC RP11-543P4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165602

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   tcatagcaatacacaaacca 133
             ||||||||||||||||||||
Sbjct: 86205 tcatagcaatacacaaacca 86224
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>emb|BX950184.7| Zebrafish DNA sequence from clone CH211-103O12 in linkage group 12,
             complete sequence
          Length = 150475

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    aacaaattacaacatttcaa 32
             ||||||||||||||||||||
Sbjct: 24720 aacaaattacaacatttcaa 24739
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>emb|AL833181.1|HSM804492 Homo sapiens mRNA; cDNA DKFZp667E155 (from clone DKFZp667E155)
          Length = 3742

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 372 ccccttgtcttggccctcttcatt 395
           |||||| |||||||||||||||||
Sbjct: 775 ccccttctcttggccctcttcatt 798
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>gb|AC074194.6| Homo sapiens BAC clone RP11-739P1 from 4, complete sequence
          Length = 177273

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    ttcaaatacaagcacaagaa 87
             ||||||||||||||||||||
Sbjct: 52317 ttcaaatacaagcacaagaa 52298
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>gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, complete sequence
          Length = 168864

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    aaccagatctttgcatccct 443
              ||||||||||||||||||||
Sbjct: 102652 aaccagatctttgcatccct 102633
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>gb|AC008695.9|AC008695 Homo sapiens chromosome 5 clone CTB-6P6, complete sequence
          Length = 152764

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 484    gctgctgcttcttgaagaag 503
              ||||||||||||||||||||
Sbjct: 143745 gctgctgcttcttgaagaag 143726
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 571     caataatttcaacaggcagc 590
               ||||||||||||||||||||
Sbjct: 2670905 caataatttcaacaggcagc 2670886
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 400      ggctgttgtggaaaggggat 419
                ||||||||||||||||||||
Sbjct: 11358736 ggctgttgtggaaaggggat 11358755
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 525      cttaacagatcctcaaggat 544
                ||||||||||||||||||||
Sbjct: 32864121 cttaacagatcctcaaggat 32864102
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>gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, complete sequence
          Length = 137009

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 372   ccccttgtcttggccctcttcatt 395
             |||||| |||||||||||||||||
Sbjct: 54987 ccccttctcttggccctcttcatt 54964
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>gb|AC106875.5| Homo sapiens BAC clone RP11-494G9 from 2, complete sequence
          Length = 59580

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   tttacccccttgtcttggcc 386
             ||||||||||||||||||||
Sbjct: 39757 tttacccccttgtcttggcc 39738
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>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0005J15, complete sequence
          Length = 159270

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   ggctgttgtggaaaggggat 419
             ||||||||||||||||||||
Sbjct: 70270 ggctgttgtggaaaggggat 70289
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>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0413G02
          Length = 155633

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 525   cttaacagatcctcaaggat 544
             ||||||||||||||||||||
Sbjct: 85526 cttaacagatcctcaaggat 85507
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>dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUD21
          Length = 69850

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   accaaacctctccagtagca 206
             ||||||||||||||||||||
Sbjct: 16327 accaaacctctccagtagca 16346
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>gb|BT021753.1| Bos taurus olfactomedin-like 1 (OLFML1), mRNA, complete cds
          Length = 2084

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 gctgctgcttcttgaagaag 503
           ||||||||||||||||||||
Sbjct: 338 gctgctgcttcttgaagaag 319
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>gb|AC155268.1| Mus musculus BAC clone RP23-204K22 from 16, complete sequence
          Length = 218381

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    ataaccaaacctctccagta 203
              ||||||||||||||||||||
Sbjct: 149114 ataaccaaacctctccagta 149095
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>emb|AL845282.12| Zebrafish DNA sequence from clone DKEY-28P18 in linkage group 21,
              complete sequence
          Length = 192865

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 566    agcatcaataatttcaacag 585
              ||||||||||||||||||||
Sbjct: 166774 agcatcaataatttcaacag 166793
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>emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on chromosome 14, complete
              sequence
          Length = 174286

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 426    ccagatctttgcatcccttcttca 449
              ||||||||||| ||||||||||||
Sbjct: 120766 ccagatctttgtatcccttcttca 120789


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,365,453
Number of Sequences: 3902068
Number of extensions: 5365453
Number of successful extensions: 102772
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102545
Number of HSP's gapped (non-prelim): 227
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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