>NEO1_MOUSE (P97798) Neogenin precursor|
          Length = 1493

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
 Frame = +1

Query: 100  SSLAAPAVRRIYHQQRDWP-------ASSPNGTDCLPNTPSNSFNP 216
            SSLA+PA   +YH    WP       +   N T+ + NTPS    P
Sbjct: 1299 SSLASPARSHLYHPSSPWPIGTSMSLSDRANSTESVRNTPSTDTMP 1344

>NEO1_HUMAN (Q92859) Neogenin precursor|
          Length = 1461

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
 Frame = +1

Query: 100  SSLAAPAVRRIYHQQRDWP-------ASSPNGTDCLPNTPSNSFNP 216
            SSLA+PA   +YH    WP       +   N T+ + NTPS    P
Sbjct: 1268 SSLASPARSHLYHPGSPWPIGTSMSLSDRANSTESVRNTPSTDTMP 1313

>PHYK2_ORYSA (Q5N9J9) Probable phytol kinase 2, chloroplast precursor (EC|
           2.7.-.-) (Fragment)
          Length = 296

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
 Frame = -1

Query: 445 LPASAMHRRG-----LGMPAFLRXAACSRSTTTPYRPVTSITAREGAPRAAPLPPGKSSL 281
           LP+SA   R      L  PA    A+CS     P R V   + R+G   AA +PP  S L
Sbjct: 4   LPSSAPRSRPQSRPPLSPPAAAAAASCSFDLPRPRRLVADGSRRKGT-MAAAIPPEASGL 62

Query: 280 AYVCG 266
           A+  G
Sbjct: 63  AHDLG 67

>RL23A_TRYBB (P41165) 60S ribosomal protein L23a (L25)|
          Length = 164

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 409 MPAFLRXAACSRSTTTPYRPVTSITAREGAPRAAPLP 299
           MPA    AA S+  + P   V+   A++GAP AA  P
Sbjct: 1   MPAKAASAAASKKNSAPKSAVSKKVAKKGAPAAAAKP 37

>FAS_HUMAN (P49327) Fatty acid synthase (EC 2.3.1.85) [Includes:|
           [Acyl-carrier-protein] S-acetyltransferase (EC
           2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase
           (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase
           (EC 2.3.1.41); 3-oxoacyl-[acyl-
          Length = 2511

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
 Frame = -1

Query: 427 HRRGLGMPAFLRXAACSRSTTTPYRPVTSITAREGAPRAAPLPPGKSSLAYVC---GDRQ 257
           H + L   + L   A   +T  P+R    +    G P    +P G+  L ++C   G + 
Sbjct: 444 HSQDLAFLSMLNDIAAVPATAMPFRGYAVLGGERGGPEVQQVPAGERPLWFICSGMGTQW 503

Query: 256 LGRMIIL**TERFVD 212
            G  + L   +RF D
Sbjct: 504 RGMGLSLMRLDRFRD 518

>VL2_HPV32 (P36757) Minor capsid protein L2|
          Length = 476

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 63  PHKSDRKNSSSRLQLSSTCRATNLPPTERLARI 161
           PH+S R+  +S  QL  TC+A+   P + + +I
Sbjct: 3   PHRSRRRKRASATQLYQTCKASGTCPPDVIPKI 35

>NR4A1_HUMAN (P22736) Orphan nuclear receptor NR4A1 (Orphan nuclear receptor|
           HMR) (Early response protein NAK1) (TR3 orphan receptor)
           (ST-59)
          Length = 598

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 8/68 (11%)
 Frame = -1

Query: 442 PASAMHRRGLGMPAFLRXAACSRSTTTPY--------RPVTSITAREGAPRAAPLPPGKS 287
           P+ A H+ G G    +  A    + T+P+         PVTS  AR GA      P G  
Sbjct: 211 PSQATHQLGEGESYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGA------PGGSE 264

Query: 286 SLAYVCGD 263
               VCGD
Sbjct: 265 GRCAVCGD 272

>NEO1_CHICK (Q90610) Neogenin (Fragment)|
          Length = 1443

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
 Frame = +1

Query: 103  SLAAPAVRRIYHQQRDWPASS-------PNGTDCLPNTPSNSFNP 216
            SLA+P    ++HQ   WP  +        N T+ + NTPS+   P
Sbjct: 1254 SLASPTRSYLHHQVSPWPVGTSMSHSDRANSTESVRNTPSSDTMP 1298


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,880,791
Number of Sequences: 219361
Number of extensions: 1302120
Number of successful extensions: 3857
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3854
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)