>CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1)|
          Length = 1430

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +3

Query: 321  PGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPCVSSR 491
            P    P P  + PL   PL + S    +KPP SP  +  Q V     +QGSP  +S+
Sbjct: 1196 PPPAEPPPTDLMPLPPLPLPDGSARKPVKPPVSPKPILAQPV---SKIQGSPTPASK 1249

>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/57 (38%), Positives = 25/57 (43%)
 Frame = +3

Query: 321  PGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPCVSSR 491
            P    P P  +A L   P  E       KPP SP  V  Q V   P LQGSP  +S+
Sbjct: 1195 PPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPV---PKLQGSPTPTSK 1248

>CF122_HUMAN (Q5T6M2) Protein C6orf122|
          Length = 205

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +1

Query: 385 PPGRCF*S----LLEVRPPFQNNVSTDLPYCRVHPACPADPGSLHQEPVSQHSTEEKRRS 552
           PPGRCF      +   R   + + +   P+C    A P +P S+H+   S  S + K R+
Sbjct: 107 PPGRCFTRERHPVPRQRKCRRQHSTGRKPHCGTRSAAPRNPKSIHKRSFSAKSLKNKTRN 166

>PTPRZ_RAT (Q62656) Receptor-type tyrosine-protein phosphatase zeta precursor|
            (EC 3.1.3.48) (R-PTP-zeta) (Phosphacan) (3F8 chondroitin
            sulfate proteoglycan) (3H1 keratan sulfate proteoglycan)
          Length = 2316

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +3

Query: 333  MPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*S--PILQGSP 476
            +PS P+   LTETP+ E S   +  P  S S+ S+  +H +  P+L  SP
Sbjct: 1207 LPSGPRDPVLTETPMVEQSSSSVSLPLASESASSKSTLHFTSVPVLNMSP 1256

>PHC3_MOUSE (Q8CHP6) Polyhomeotic-like protein 3|
          Length = 981

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
 Frame = +3

Query: 318 RPGRCMPSPPQIAPLTETPLREASRPMLL----KPPRSPSSVSEQCVH*SPILQGSPCVS 485
           +P  C P      PLT +P +  S    +     PP SPS      +H   ++Q  P VS
Sbjct: 365 QPQHCSPVQSHPPPLTVSPNQAQSAQQSVVVSPPPPHSPSQSPTIIIHPQALIQPHPLVS 424

Query: 486 S 488
           S
Sbjct: 425 S 425


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,889,062
Number of Sequences: 219361
Number of extensions: 1789862
Number of successful extensions: 4832
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4827
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)