ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3i20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chlo... 173 4e-43
2TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chlo... 171 2e-42
3TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chlo... 164 2e-40
4TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloro... 164 2e-40
5TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chl... 164 3e-40
6TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chlo... 159 8e-39
7TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chlo... 156 4e-38
8GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1... 72 2e-12
9GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2... 69 1e-11
10TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non... 52 2e-06
11RPH1_YEAST (P39956) DNA damage-responsive transcriptional repres... 31 3.4
12PPQ1_YEAST (P32945) Serine/threonine-protein phosphatase PPQ (EC... 31 3.4
13PCSK5_HUMAN (Q92824) Proprotein convertase subtilisin/kexin type... 30 4.5
14DNAT_BUCAP (Q8KA78) Primosomal protein 1 (Primosomal protein I) 30 5.8
15OTC_YEAST (P05150) Ornithine carbamoyltransferase (EC 2.1.3.3) (... 29 10.0

>TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 409

 Score =  173 bits (438), Expect = 4e-43
 Identities = 88/109 (80%), Positives = 95/109 (87%)
 Frame = -3

Query: 626 IIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER 447
           IIAL+VCIPPALI EGP+LMQ+G +DAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER
Sbjct: 287 IIALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER 346

Query: 446 VAPLTHAVGNVLKRXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYSY 300
           VAPLTHAVGNVLKR           GNKI+TQTGIGT +AIAGVA+YSY
Sbjct: 347 VAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSY 395



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>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (E29)
          Length = 414

 Score =  171 bits (432), Expect = 2e-42
 Identities = 83/109 (76%), Positives = 94/109 (86%)
 Frame = -3

Query: 626 IIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER 447
           IIAL+ C+PPA+ IEGPQL+Q+G NDAIAKVGLTKFV+DLF VG+FYHLYNQ+ATNTLER
Sbjct: 291 IIALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLER 350

Query: 446 VAPLTHAVGNVLKRXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYSY 300
           VAPLTHAVGNVLKR           GNKI+TQTGIGTC+AIAGVAIYS+
Sbjct: 351 VAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSF 399



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>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E29)
          Length = 404

 Score =  164 bits (416), Expect = 2e-40
 Identities = 81/108 (75%), Positives = 92/108 (85%)
 Frame = -3

Query: 626 IIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER 447
           IIAL VC+PPA+I+EGPQLM++G NDAIAKVGLTKF+SDLF VG+FYHLYNQ+ATNTLER
Sbjct: 281 IIALFVCLPPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLATNTLER 340

Query: 446 VAPLTHAVGNVLKRXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 303
           VAPLTHAVGNVLKR           GNKI+TQT IGT +AIAGVA+YS
Sbjct: 341 VAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYS 388



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>TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E30)
          Length = 402

 Score =  164 bits (415), Expect = 2e-40
 Identities = 83/109 (76%), Positives = 92/109 (84%)
 Frame = -3

Query: 626 IIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER 447
           IIAL+VCIPPALIIEGP L++ G NDAIAKVGL KFVSDLF VG+FYHLYNQ+ATNTLER
Sbjct: 279 IIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLER 338

Query: 446 VAPLTHAVGNVLKRXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYSY 300
           VAPLTHAVGNVLKR           GNKI+TQTGIGT +AIAGVA+YS+
Sbjct: 339 VAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSF 387



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>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score =  164 bits (414), Expect = 3e-40
 Identities = 80/108 (74%), Positives = 93/108 (86%)
 Frame = -3

Query: 626 IIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER 447
           IIAL VC+PPA+I+EGPQL+++G NDAIAKVG+TKF+SDLF VG+FYHLYNQ+ATNTLER
Sbjct: 284 IIALFVCLPPAIIVEGPQLLKHGFNDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLER 343

Query: 446 VAPLTHAVGNVLKRXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 303
           VAPLTHAVGNVLKR           GNKI+TQTGIGT +AIAGVA+YS
Sbjct: 344 VAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYS 391



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>TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score =  159 bits (401), Expect = 8e-39
 Identities = 79/108 (73%), Positives = 90/108 (83%)
 Frame = -3

Query: 626 IIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER 447
           IIAL+ CIPPA++ EGPQL+++G NDAIAKVG+ KF+SDLF VG+FYHLYNQIATNTLER
Sbjct: 284 IIALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWVGMFYHLYNQIATNTLER 343

Query: 446 VAPLTHAVGNVLKRXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 303
           VAPLTHAVGNVLKR           GNKI+TQT IGT +AIAGVAIYS
Sbjct: 344 VAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYS 391



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>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 408

 Score =  156 bits (395), Expect = 4e-38
 Identities = 76/108 (70%), Positives = 91/108 (84%)
 Frame = -3

Query: 626 IIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER 447
           II+L+ CIPPA+I+EGPQL+++G +DAIAKVG+TKF+SDLF VG+FYHLYNQ+A NTLER
Sbjct: 285 IISLLFCIPPAIILEGPQLLKHGFSDAIAKVGMTKFISDLFWVGMFYHLYNQLAINTLER 344

Query: 446 VAPLTHAVGNVLKRXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 303
           VAPLTHAVGNVLKR           GNKI+TQT IGT +AIAGVA+YS
Sbjct: 345 VAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYS 392



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>GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1, chloroplast|
           precursor
          Length = 388

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 36/108 (33%), Positives = 61/108 (56%)
 Frame = -3

Query: 626 IIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER 447
           +++L++  P A+ +EGPQ+   G   A+A VG  +FV  +    +FYHLYNQ++  +L++
Sbjct: 278 MLSLLILTPFAIAVEGPQMWVDGWQTALATVG-PQFVWWVVAQSVFYHLYNQVSYMSLDQ 336

Query: 446 VAPLTHAVGNVLKRXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 303
           ++PLT +VGN +KR              +     +G  +AI G  +YS
Sbjct: 337 ISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYS 384



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>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast|
           precursor
          Length = 388

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 34/108 (31%), Positives = 61/108 (56%)
 Frame = -3

Query: 626 IIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLER 447
           +++LV+  P ++ +E PQ+   G  +A+++VG   FV  +    +FYHLYNQ++  +L++
Sbjct: 278 MMSLVILTPFSIAVEVPQMWAAGWQNAVSQVG-PNFVWWVVAQSVFYHLYNQVSYMSLDQ 336

Query: 446 VAPLTHAVGNVLKRXXXXXXXXXXXGNKITTQTGIGTCVAIAGVAIYS 303
           ++PLT ++GN +KR              I     +G  +AI G  +YS
Sbjct: 337 ISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYS 384



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>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green|
           plastid, chloroplast precursor (CTPT)
          Length = 402

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 25/80 (31%), Positives = 41/80 (51%)
 Frame = -3

Query: 542 AKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKRXXXXXXXXXXXGNK 363
           A V + +  +   +  L +H Y Q++   L RV+P+TH+VGN +KR              
Sbjct: 311 AGVNVQQIYTKSLIAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTP 370

Query: 362 ITTQTGIGTCVAIAGVAIYS 303
           ++     GT +A+AGV +YS
Sbjct: 371 VSPVNAFGTGIALAGVFLYS 390



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>RPH1_YEAST (P39956) DNA damage-responsive transcriptional repressor RPH1|
          Length = 796

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +3

Query: 345 SSLCGNFVAKNDDRETNDENPFQHIANSMCQRGHPLQSVCSNLIIEMVEQSHQE 506
           +S+ G     ND +  + E P    AN + ++  P+++  SNLI+  V  + QE
Sbjct: 619 TSVLGPLSDTNDIKTPHPERPNHKTANRILKKESPVETSKSNLILSKVASTRQE 672



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>PPQ1_YEAST (P32945) Serine/threonine-protein phosphatase PPQ (EC 3.1.3.16)|
          Length = 549

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
 Frame = +3

Query: 120 STSQGNTLADN*KTKNK*RRSDSSMSSPGQCSTGNHQTIFTAVTSSRSLRPFLFLDLSFD 299
           S +  NTLA   K  N  R S+ ++  PG+    + Q I+T   + +SL  +L +D+S  
Sbjct: 60  SINNYNTLASAGKNNNNKRASNDNLLIPGE--NAHKQKIYTKDENLKSL--YLDIDVSVA 115

Query: 300 VRVDG--------NTSYCNASSDSSLCGNFVAKNDDRETNDENPFQHIANS 428
             +          NT+  ++++ ++   N +     RE+N  +P  +  +S
Sbjct: 116 KALSSSATAPKLINTARTSSTTTATTSNNILTSPSYRESNYSSPSSYSFSS 166



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>PCSK5_HUMAN (Q92824) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC5)
           (Subtilisin/kexin-like protease PC5) (PC6) (hPC6)
          Length = 913

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 561 WIKRCNCKSRSDKICIRSFPGGIVLP 484
           W  RC C  R D +C+ +  GG +LP
Sbjct: 3   WESRCCCPGRLDLLCVLALLGGCLLP 28



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>DNAT_BUCAP (Q8KA78) Primosomal protein 1 (Primosomal protein I)|
          Length = 166

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = -3

Query: 605 IPPALIIEGPQLMQYGLNDAIAKVGLTKFVSDLFLVGLFYH--LYNQIATNTLERVAPLT 432
           IP    I+   L    LN+ ++K  L  F+S     GLF+H   + Q    +LER   + 
Sbjct: 81  IPDKDFIQKAALWGISLNEEVSKYELASFISYWEAEGLFFHHIQWQQKLARSLERSRSMN 140

Query: 431 HAV 423
           +A+
Sbjct: 141 NAI 143



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>OTC_YEAST (P05150) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)|
           (Ornithine transcarbamylase)
          Length = 338

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 417 IANSMCQRGHPLQSVCSNLII 479
           I NS+C + HPLQ++C  L I
Sbjct: 136 IINSLCDKFHPLQAICDLLTI 156


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,796,650
Number of Sequences: 219361
Number of extensions: 1729316
Number of successful extensions: 4500
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4494
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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