ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3h14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105951.1| Zea mays PCO080381 mRNA sequence Length = 826 Score = 543 bits (274), Expect = e-151 Identities = 387/422 (91%), Gaps = 2/422 (0%) Strand = Plus / Minus Query: 179 gttttctccataagctggatgggcgccaatatgttctgtttgctcgtctccacgatgcaa 238 |||||||||||||| || || || ||||| ||||||||||| || |||||||| |||||| Sbjct: 543 gttttctccataagttgtattggtgccaagatgttctgtttacttgtctccacaatgcaa 484 Query: 239 ccgttcatcaccatctcttcgagcatgaagtgcactttttccagatggaacatgatgtcg 298 || ||||||||||||||||| | ||||||||||||||| ||||||||||||||||| ||| Sbjct: 483 ccattcatcaccatctcttccaacatgaagtgcactttctccagatggaacatgatatcg 424 Query: 299 agctcgcacacgttgccaaagtggcggtccatggtttccacgagaagatgtatgaattca 358 ||||||||||| ||||| |||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 423 agctcgcacacattgccgaagtggcgatccatagtttccaccagaagatgtatgaattca 364 Query: 359 aggatggctaactcattctcatcgttgtccacgccgacgaggaagaagagggaggcgtag 418 ||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||||| Sbjct: 363 aggatagctaactcattctcatcgctgtcgacgccgacgaggaagaaaagggaggcgtag 304 Query: 419 cgcctgtagacgaccttgtagttccggtgctccacgaaagagcactgctggtcggtgcgg 478 |||||||| |||||||||||||||||||||||||| || || ||||||||||| |||||| Sbjct: 303 cgcctgtaaacgaccttgtagttccggtgctccacaaacgaacactgctggtcagtgcgg 244 Query: 479 gcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcgagggaagaggtg 538 ||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| Sbjct: 243 gcgaggcacttgcggacgatctcgccctcgagggcccgtcgctcgtcgaggg-agaggtg 185 Query: 539 ctcgtagtactgcgccagcccgcgtctgcccctgcttgttcaccagcagcacgaaccgga 598 |||||||||||||||||| ||||||||| ||||||||||| || | |||||||||||||| Sbjct: 184 ctcgtagtactgcgccag-ccgcgtctggccctgcttgttgacgaacagcacgaaccgga 126 Query: 599 tc 600 || Sbjct: 125 tc 124
>ref|NM_196093.1| Oryza sativa (japonica cultivar-group) putative clathrin assembly protein (OSJNBa0083M08.3), mRNA Length = 622 Score = 531 bits (268), Expect = e-148 Identities = 390/428 (91%), Gaps = 2/428 (0%) Strand = Plus / Minus Query: 179 gttttctccataagctggatgggcgccaatatgttctgtttgctcgtctccacgatgcaa 238 ||||||||||| || ||||| || ||||| ||||||||||| || || || || |||||| Sbjct: 438 gttttctccatcaggtggattggtgccaagatgttctgtttactagtttcgacaatgcaa 379 Query: 239 ccgttcatcaccatctcttcgagcatgaagtgcactttttccagatggaacatgatgtcg 298 || ||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 378 ccattcatcaccatctcttccagcatgaagtgcaccttctccagatggaacataatgtcg 319 Query: 299 agctcgcacacgttgccaaagtggcggtccatggtttccacgagaagatgtatgaattca 358 ||||| ||||| ||||||||||| |||||||| ||||| || | |||||| ||||||||| Sbjct: 318 agctcacacacattgccaaagtgacggtccatagtttcaaccaaaagatgaatgaattca 259 Query: 359 aggatggctaactcattctcatcgttgtccacgccgacgaggaagaagagggaggcgtag 418 ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 258 aggatagctaactcattctcatcgttgtcgacgccgactaggaagaagagggaggcgtag 199 Query: 419 cgcctgtagacgaccttgtagttccggtgctccacgaaagagcactgctggtcggtgcgg 478 |||| ||| || ||||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 198 cgccggtacaccaccttgtagttgcggtgctccacgaaagaacactggtggtcggtgcgg 139 Query: 479 gcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcgagggaagaggtg 538 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 138 gcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcgacgg-agaggtg 80 Query: 539 ctcgtagtactgcgccagcccgcgtctgcccctgcttgttcaccagcagcacgaaccgga 598 ||||||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||| Sbjct: 79 ctcgtagtattgcgcca-cccgcgtctgcccctgcttgttcaccatcaccacgaaccgga 21 Query: 599 tccccatc 606 |||||||| Sbjct: 20 tccccatc 13
>dbj|AK120131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026P11, full insert sequence Length = 761 Score = 523 bits (264), Expect = e-145 Identities = 389/428 (90%), Gaps = 2/428 (0%) Strand = Plus / Minus Query: 179 gttttctccataagctggatgggcgccaatatgttctgtttgctcgtctccacgatgcaa 238 ||||||||||| || ||||| || ||||| ||||||||||| || || || || |||||| Sbjct: 477 gttttctccatcaggtggattggtgccaagatgttctgtttactagtttcgacaatgcaa 418 Query: 239 ccgttcatcaccatctcttcgagcatgaagtgcactttttccagatggaacatgatgtcg 298 || ||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 417 ccattcatcaccatctcttccagcatgaagtgcaccttctccagatggaacataatgtcg 358 Query: 299 agctcgcacacgttgccaaagtggcggtccatggtttccacgagaagatgtatgaattca 358 ||||| ||||| ||||||||||| |||||||| ||||| || | |||||| ||||||||| Sbjct: 357 agctcacacacattgccaaagtgacggtccatagtttcaaccaaaagatgaatgaattca 298 Query: 359 aggatggctaactcattctcatcgttgtccacgccgacgaggaagaagagggaggcgtag 418 ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 297 aggatagctaactcattctcatcgttgtcgacgccgactaggaagaagagggaggcgtag 238 Query: 419 cgcctgtagacgaccttgtagttccggtgctccacgaaagagcactgctggtcggtgcgg 478 |||| ||| || ||||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 237 cgccggtacaccaccttgtagttgcggtgctccacgaaagaacactggtggtcggtgcgg 178 Query: 479 gcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcgagggaagaggtg 538 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 177 gcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcgacgg-agaggtg 119 Query: 539 ctcgtagtactgcgccagcccgcgtctgcccctgcttgttcaccagcagcacgaaccgga 598 ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||| Sbjct: 118 ctcgtagtattgcgcca-cccgcgtctgcccctgcttgttcaccatcaccacgaaccggg 60 Query: 599 tccccatc 606 |||||||| Sbjct: 59 tccccatc 52
>ref|XM_482218.1| Oryza sativa (japonica cultivar-group), mRNA Length = 432 Score = 498 bits (251), Expect = e-137 Identities = 385/427 (90%), Gaps = 2/427 (0%) Strand = Plus / Minus Query: 179 gttttctccataagctggatgggcgccaatatgttctgtttgctcgtctccacgatgcaa 238 |||||||||||||||||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 425 gttttctccataagctggattggtgctaagatgttctgtttacttgtctctactatgcag 366 Query: 239 ccgttcatcaccatctcttcgagcatgaagtgcactttttccagatggaacatgatgtcg 298 || ||||||||||||||||| |||||||||||||| || || |||||||||||||||||| Sbjct: 365 ccattcatcaccatctcttccagcatgaagtgcaccttctctagatggaacatgatgtcg 306 Query: 299 agctcgcacacgttgccaaagtggcggtccatggtttccacgagaagatgtatgaattca 358 || || ||||| || || |||||||||||||| |||||||| | |||||| |||||||| Sbjct: 305 agttcacacacatttccgaagtggcggtccatagtttccacaaaaagatgaatgaattcg 246 Query: 359 aggatggctaactcattctcatcgttgtccacgccgacgaggaagaagagggaggcgtag 418 || || |||| ||||||||| |||||||| ||||||||||||||||||||||| ||||| Sbjct: 245 agaatagctagctcattctcgtcgttgtcgacgccgacgaggaagaagagggaagcgtac 186 Query: 419 cgcctgtagacgaccttgtagttccggtgctccacgaaagagcactgctggtcggtgcgg 478 |||| ||| || |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 185 cgccggtacaccaccttgtagttccggtgctccacgaacgaacactgctggtcggtgcgg 126 Query: 479 gcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcgagggaagaggtg 538 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 125 gcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcgatgg-agaggtg 67 Query: 539 ctcgtagtactgcgccagcccgcgtctgcccctgcttgttcaccagcagcacgaaccgga 598 |||||||||||| ||||| |||||||||||||||||||||||| | |||||||||||||| Sbjct: 66 ctcgtagtactgggccag-ccgcgtctgcccctgcttgttcacgaacagcacgaaccgga 8 Query: 599 tccccat 605 ||||||| Sbjct: 7 tccccat 1
>gb|BT017687.1| Zea mays clone EL01N0444B12.c mRNA sequence Length = 566 Score = 494 bits (249), Expect = e-136 Identities = 349/381 (91%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 179 gttttctccataagctggatgggcgccaatatgttctgtttgctcgtctccacgatgcaa 238 |||||||||||||| || || || ||||| || |||||||| || |||||||| |||||| Sbjct: 387 gttttctccataagttgtattggtgccaagatattctgtttacttgtctccacaatgcaa 328 Query: 239 ccgttcatcaccatctcttcgagcatgaagtgcactttttccagatggaacatgatgtcg 298 || ||||||||||||||||| | ||||||||||||||| ||||||||||||||||| ||| Sbjct: 327 ccattcatcaccatctcttccaacatgaagtgcactttctccagatggaacatgatatcg 268 Query: 299 agctcgcacacgttgccaaagtggcggtccatggtttccacgagaagatgtatgaattca 358 ||||||||||| ||||| |||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 267 agctcgcacacattgccgaagtggcgatccatagtttccaccagaagatgtatgaattca 208 Query: 359 aggatggctaactcattctcatcgttgtccacgccgacgaggaagaagagggaggcgtag 418 ||||| |||||||||||||||||| |||| |||||||| |||||||| |||||||||||| Sbjct: 207 aggatagctaactcattctcatcgctgtcgacgccgacaaggaagaaaagggaggcgtag 148 Query: 419 cgcctgtagacgaccttgtagttccggtgctccacgaaagagcactgctggtcggtgcgg 478 |||||||| |||||||||||||||||||||||||| || || ||||||||||| |||||| Sbjct: 147 cgcctgtaaacgaccttgtagttccggtgctccacaaacgaacactgctggtcagtgcgg 88 Query: 479 gcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcgagggaagaggtg 538 ||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| Sbjct: 87 gcgaggcacttgcggacgatctcgccctcgagggcccgtcgctcgtcgaggg-agaggtg 29 Query: 539 ctcgtagtactgcgccagccc 559 ||||||||||||||||||||| Sbjct: 28 ctcgtagtactgcgccagccc 8
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 222 bits (112), Expect = 1e-54 Identities = 138/144 (95%), Gaps = 2/144 (1%) Strand = Plus / Minus Query: 463 ctgctggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctc 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18751523 ctgctggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctc 18751464 Query: 523 gtcgagggaagaggtgctcgtagtactgcgccagcccgcgtctgcccctgcttgttcacc 582 ||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 18751463 gtcgatgg-agaggtgctcgtagtactgggccag-ccgcgtctgcccctgcttgttcacg 18751406 Query: 583 agcagcacgaaccggatccccatc 606 | |||||||||||||||||||||| Sbjct: 18751405 aacagcacgaaccggatccccatc 18751382 Score = 131 bits (66), Expect = 3e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 179 gttttctccataagctggatgggcgccaatatgttctgtttgctcgtctccacgatgcaa 238 |||||||||||||||||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 18752888 gttttctccataagctggattggtgctaagatgttctgtttacttgtctctactatgcag 18752829 Query: 239 ccgttcatcaccatctcttcgagcatgaagtgcactttttccagatggaacatgatgtcg 298 || ||||||||||||||||| |||||||||||||| || || |||||||||||||||||| Sbjct: 18752828 ccattcatcaccatctcttccagcatgaagtgcaccttctctagatggaacatgatgtcg 18752769 Query: 299 ag 300 || Sbjct: 18752768 ag 18752767 Score = 117 bits (59), Expect = 5e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 376 ctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctgtagacgacctt 435 |||||||||||| ||||||||||||||||||||||| ||||| |||| ||| || ||||| Sbjct: 18772802 ctcatcgttgtcgacgccgacgaggaagaagagggaagcgtaccgccggtacaccacctt 18772743 Query: 436 gtagttccggtgctccacgaaagagcactgc 466 ||||||||||||||||||||| || |||||| Sbjct: 18772742 gtagttccggtgctccacgaacgaacactgc 18772712 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 380 tcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctgtagacgaccttgtag 439 |||||||| ||||||||||||||||||||||| ||||| |||| ||| || ||||||||| Sbjct: 18751821 tcgttgtcgacgccgacgaggaagaagagggaagcgtaccgccggtacaccaccttgtag 18751762 Query: 440 ttccggtgctccacgaaagagcactgc 466 ||||||||||||||||| || |||||| Sbjct: 18751761 ttccggtgctccacgaacgaacactgc 18751735 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 317 aagtggcggtccatggtttccacgagaagatgtatgaattcaaggatggctaactcattc 376 |||||||||||||| |||||||| | |||||| |||||||| || || |||| ||||||| Sbjct: 18752651 aagtggcggtccatagtttccacaaaaagatgaatgaattcgagaatagctagctcattc 18752592 Query: 377 t 377 | Sbjct: 18752591 t 18752591
>dbj|AP003880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1123_G08 Length = 146944 Score = 222 bits (112), Expect = 1e-54 Identities = 138/144 (95%), Gaps = 2/144 (1%) Strand = Plus / Minus Query: 463 ctgctggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctc 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54972 ctgctggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctc 54913 Query: 523 gtcgagggaagaggtgctcgtagtactgcgccagcccgcgtctgcccctgcttgttcacc 582 ||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 54912 gtcgatgg-agaggtgctcgtagtactgggccag-ccgcgtctgcccctgcttgttcacg 54855 Query: 583 agcagcacgaaccggatccccatc 606 | |||||||||||||||||||||| Sbjct: 54854 aacagcacgaaccggatccccatc 54831 Score = 131 bits (66), Expect = 3e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 179 gttttctccataagctggatgggcgccaatatgttctgtttgctcgtctccacgatgcaa 238 |||||||||||||||||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 56337 gttttctccataagctggattggtgctaagatgttctgtttacttgtctctactatgcag 56278 Query: 239 ccgttcatcaccatctcttcgagcatgaagtgcactttttccagatggaacatgatgtcg 298 || ||||||||||||||||| |||||||||||||| || || |||||||||||||||||| Sbjct: 56277 ccattcatcaccatctcttccagcatgaagtgcaccttctctagatggaacatgatgtcg 56218 Query: 299 ag 300 || Sbjct: 56217 ag 56216 Score = 117 bits (59), Expect = 5e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 376 ctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctgtagacgacctt 435 |||||||||||| ||||||||||||||||||||||| ||||| |||| ||| || ||||| Sbjct: 76251 ctcatcgttgtcgacgccgacgaggaagaagagggaagcgtaccgccggtacaccacctt 76192 Query: 436 gtagttccggtgctccacgaaagagcactgc 466 ||||||||||||||||||||| || |||||| Sbjct: 76191 gtagttccggtgctccacgaacgaacactgc 76161 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 380 tcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctgtagacgaccttgtag 439 |||||||| ||||||||||||||||||||||| ||||| |||| ||| || ||||||||| Sbjct: 55270 tcgttgtcgacgccgacgaggaagaagagggaagcgtaccgccggtacaccaccttgtag 55211 Query: 440 ttccggtgctccacgaaagagcactgc 466 ||||||||||||||||| || |||||| Sbjct: 55210 ttccggtgctccacgaacgaacactgc 55184 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 317 aagtggcggtccatggtttccacgagaagatgtatgaattcaaggatggctaactcattc 376 |||||||||||||| |||||||| | |||||| |||||||| || || |||| ||||||| Sbjct: 56100 aagtggcggtccatagtttccacaaaaagatgaatgaattcgagaatagctagctcattc 56041 Query: 377 t 377 | Sbjct: 56040 t 56040
>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence, complete sequence Length = 106110 Score = 214 bits (108), Expect = 3e-52 Identities = 134/140 (95%), Gaps = 2/140 (1%) Strand = Plus / Minus Query: 467 tggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38086 tggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcg 38027 Query: 527 agggaagaggtgctcgtagtactgcgccagcccgcgtctgcccctgcttgttcaccagca 586 | || |||||||||||||||| ||||||| ||||||||||||||||||||||||||| || Sbjct: 38026 acgg-agaggtgctcgtagtattgcgcca-cccgcgtctgcccctgcttgttcaccatca 37969 Query: 587 gcacgaaccggatccccatc 606 ||||||||||||||||||| Sbjct: 37968 ccacgaaccggatccccatc 37949 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 179 gttttctccataagctggatgggcgccaatatgttctgtttgctcgtctccacgatgcaa 238 ||||||||||| || ||||| || ||||| ||||||||||| || || || || |||||| Sbjct: 40537 gttttctccatcaggtggattggtgccaagatgttctgtttactagtttcgacaatgcaa 40478 Query: 239 ccgttcatcaccatctcttcgagcatgaagtgcactttttccagatggaacatgatgtcg 298 || ||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 40477 ccattcatcaccatctcttccagcatgaagtgcaccttctccagatggaacataatgtcg 40418 Query: 299 agctc 303 ||||| Sbjct: 40417 agctc 40413 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 376 ctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctgtagacgacctt 435 |||||||||||| |||||||| ||||||||||||||||||||||||| ||| || ||||| Sbjct: 38311 ctcatcgttgtcgacgccgactaggaagaagagggaggcgtagcgccggtacaccacctt 38252 Query: 436 gtagttccggtgctccacgaaagagcactgc 466 |||||| ||||||||||||||||| |||||| Sbjct: 38251 gtagttgcggtgctccacgaaagaacactgc 38221 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 311 ttgccaaagtggcggtccatggtttccacgagaagatgtatgaattcaaggatggctaac 370 ||||||||||| |||||||| ||||| || | |||||| |||||||||||||| |||||| Sbjct: 40307 ttgccaaagtgacggtccatagtttcaaccaaaagatgaatgaattcaaggatagctaac 40248 Query: 371 tcattct 377 ||||||| Sbjct: 40247 tcattct 40241
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 214 bits (108), Expect = 3e-52 Identities = 134/140 (95%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 467 tggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11030150 tggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcg 11030209 Query: 527 agggaagaggtgctcgtagtactgcgccagcccgcgtctgcccctgcttgttcaccagca 586 | || |||||||||||||||| ||||||| ||||||||||||||||||||||||||| || Sbjct: 11030210 acgg-agaggtgctcgtagtattgcgcca-cccgcgtctgcccctgcttgttcaccatca 11030267 Query: 587 gcacgaaccggatccccatc 606 ||||||||||||||||||| Sbjct: 11030268 ccacgaaccggatccccatc 11030287 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Plus Query: 179 gttttctccataagctggatgggcgccaatatgttctgtttgctcgtctccacgatgcaa 238 ||||||||||| || ||||| || ||||| ||||||||||| || || || || |||||| Sbjct: 11027699 gttttctccatcaggtggattggtgccaagatgttctgtttactagtttcgacaatgcaa 11027758 Query: 239 ccgttcatcaccatctcttcgagcatgaagtgcactttttccagatggaacatgatgtcg 298 || ||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 11027759 ccattcatcaccatctcttccagcatgaagtgcaccttctccagatggaacataatgtcg 11027818 Query: 299 agctc 303 ||||| Sbjct: 11027819 agctc 11027823 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 376 ctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctgtagacgacctt 435 |||||||||||| |||||||| ||||||||||||||||||||||||| ||| || ||||| Sbjct: 11029925 ctcatcgttgtcgacgccgactaggaagaagagggaggcgtagcgccggtacaccacctt 11029984 Query: 436 gtagttccggtgctccacgaaagagcactgc 466 |||||| ||||||||||||||||| |||||| Sbjct: 11029985 gtagttgcggtgctccacgaaagaacactgc 11030015 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 311 ttgccaaagtggcggtccatggtttccacgagaagatgtatgaattcaaggatggctaac 370 ||||||||||| |||||||| ||||| || | |||||| |||||||||||||| |||||| Sbjct: 11027929 ttgccaaagtgacggtccatagtttcaaccaaaagatgaatgaattcaaggatagctaac 11027988 Query: 371 tcattct 377 ||||||| Sbjct: 11027989 tcattct 11027995
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 214 bits (108), Expect = 3e-52 Identities = 134/140 (95%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 467 tggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11036590 tggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcg 11036649 Query: 527 agggaagaggtgctcgtagtactgcgccagcccgcgtctgcccctgcttgttcaccagca 586 | || |||||||||||||||| ||||||| ||||||||||||||||||||||||||| || Sbjct: 11036650 acgg-agaggtgctcgtagtattgcgcca-cccgcgtctgcccctgcttgttcaccatca 11036707 Query: 587 gcacgaaccggatccccatc 606 ||||||||||||||||||| Sbjct: 11036708 ccacgaaccggatccccatc 11036727 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Plus Query: 179 gttttctccataagctggatgggcgccaatatgttctgtttgctcgtctccacgatgcaa 238 ||||||||||| || ||||| || ||||| ||||||||||| || || || || |||||| Sbjct: 11034139 gttttctccatcaggtggattggtgccaagatgttctgtttactagtttcgacaatgcaa 11034198 Query: 239 ccgttcatcaccatctcttcgagcatgaagtgcactttttccagatggaacatgatgtcg 298 || ||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 11034199 ccattcatcaccatctcttccagcatgaagtgcaccttctccagatggaacataatgtcg 11034258 Query: 299 agctc 303 ||||| Sbjct: 11034259 agctc 11034263 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 376 ctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctgtagacgacctt 435 |||||||||||| |||||||| ||||||||||||||||||||||||| ||| || ||||| Sbjct: 11036365 ctcatcgttgtcgacgccgactaggaagaagagggaggcgtagcgccggtacaccacctt 11036424 Query: 436 gtagttccggtgctccacgaaagagcactgc 466 |||||| ||||||||||||||||| |||||| Sbjct: 11036425 gtagttgcggtgctccacgaaagaacactgc 11036455 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 311 ttgccaaagtggcggtccatggtttccacgagaagatgtatgaattcaaggatggctaac 370 ||||||||||| |||||||| ||||| || | |||||| |||||||||||||| |||||| Sbjct: 11034369 ttgccaaagtgacggtccatagtttcaaccaaaagatgaatgaattcaaggatagctaac 11034428 Query: 371 tcattct 377 ||||||| Sbjct: 11034429 tcattct 11034435
>ref|NM_127537.2| Arabidopsis thaliana unknown protein AT2G19790 mRNA, complete cds Length = 631 Score = 143 bits (72), Expect = 8e-31 Identities = 243/300 (81%) Strand = Plus / Minus Query: 217 tttgctcgtctccacgatgcaaccgttcatcaccatctcttcgagcatgaagtgcacttt 276 |||||| |||||||| |||||||| ||||||||||| ||||| |||||||| || |||| Sbjct: 458 tttgcttgtctccacaatgcaaccattcatcaccatttcttccagcatgaaatgagcttt 399 Query: 277 ttccagatggaacatgatgtcgagctcgcacacgttgccaaagtggcggtccatggtttc 336 |||||||||||||| ||||| ||||| ||||| || ||||| || |||||| || || Sbjct: 398 ctccagatggaacattatgtctagctcacacacatttccaaaatgcttgtccattgtctc 339 Query: 337 cacgagaagatgtatgaattcaaggatggctaactcattctcatcgttgtccacgccgac 396 || | |||||||||||| || || || || | ||| || ||||||| || || || || Sbjct: 338 gaccaaaagatgtatgaactctagaatcgccagctcgttttcatcgtcatcaaccccaac 279 Query: 397 gaggaagaagagggaggcgtagcgcctgtagacgaccttgtagttccggtgctccacgaa 456 | ||||||||| || ||||| ||||||||||| | ||||||||| || ||||| || || Sbjct: 278 catgaagaagagagatgcgtaacgcctgtagactatcttgtagttgcgatgctcgacaaa 219 Query: 457 agagcactgctggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcg 516 || ||||| |||||| |||| |||||||| || |||||||| ||||| ||||| ||||| Sbjct: 218 cgaacactgttggtcgttgcgagcgaggcatttacggacgatttcgccttcgagagcgcg 159
>gb|AY059143.1| Arabidopsis thaliana putative clathrin assembly protein (At2g19790) mRNA, complete cds Length = 463 Score = 143 bits (72), Expect = 8e-31 Identities = 243/300 (81%) Strand = Plus / Minus Query: 217 tttgctcgtctccacgatgcaaccgttcatcaccatctcttcgagcatgaagtgcacttt 276 |||||| |||||||| |||||||| ||||||||||| ||||| |||||||| || |||| Sbjct: 387 tttgcttgtctccacaatgcaaccattcatcaccatttcttccagcatgaaatgagcttt 328 Query: 277 ttccagatggaacatgatgtcgagctcgcacacgttgccaaagtggcggtccatggtttc 336 |||||||||||||| ||||| ||||| ||||| || ||||| || |||||| || || Sbjct: 327 ctccagatggaacattatgtctagctcacacacatttccaaaatgcttgtccattgtctc 268 Query: 337 cacgagaagatgtatgaattcaaggatggctaactcattctcatcgttgtccacgccgac 396 || | |||||||||||| || || || || | ||| || ||||||| || || || || Sbjct: 267 gaccaaaagatgtatgaactctagaatcgccagctcgttttcatcgtcatcaaccccaac 208 Query: 397 gaggaagaagagggaggcgtagcgcctgtagacgaccttgtagttccggtgctccacgaa 456 | ||||||||| || ||||| ||||||||||| | ||||||||| || ||||| || || Sbjct: 207 catgaagaagagagatgcgtaacgcctgtagactatcttgtagttgcgatgctcgacaaa 148 Query: 457 agagcactgctggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcg 516 || ||||| |||||| |||| |||||||| || |||||||| ||||| ||||| ||||| Sbjct: 147 cgaacactgttggtcgttgcgagcgaggcatttacggacgatttcgccttcgagagcgcg 88
>gb|AF370185.1| Arabidopsis thaliana putative clathrin assembly protein (At2g19790) mRNA, complete cds Length = 645 Score = 143 bits (72), Expect = 8e-31 Identities = 243/300 (81%) Strand = Plus / Minus Query: 217 tttgctcgtctccacgatgcaaccgttcatcaccatctcttcgagcatgaagtgcacttt 276 |||||| |||||||| |||||||| ||||||||||| ||||| |||||||| || |||| Sbjct: 456 tttgcttgtctccacaatgcaaccattcatcaccatttcttccagcatgaaatgagcttt 397 Query: 277 ttccagatggaacatgatgtcgagctcgcacacgttgccaaagtggcggtccatggtttc 336 |||||||||||||| ||||| ||||| ||||| || ||||| || |||||| || || Sbjct: 396 ctccagatggaacattatgtctagctcacacacatttccaaaatgcttgtccattgtctc 337 Query: 337 cacgagaagatgtatgaattcaaggatggctaactcattctcatcgttgtccacgccgac 396 || | |||||||||||| || || || || | ||| || ||||||| || || || || Sbjct: 336 gaccaaaagatgtatgaactctagaatcgccagctcgttttcatcgtcatcaaccccaac 277 Query: 397 gaggaagaagagggaggcgtagcgcctgtagacgaccttgtagttccggtgctccacgaa 456 | ||||||||| || ||||| ||||||||||| | ||||||||| || ||||| || || Sbjct: 276 catgaagaagagagatgcgtaacgcctgtagactatcttgtagttgcgatgctcgacaaa 217 Query: 457 agagcactgctggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcg 516 || ||||| |||||| |||| |||||||| || |||||||| ||||| ||||| ||||| Sbjct: 216 cgaacactgttggtcgttgcgagcgaggcatttacggacgatttcgccttcgagagcgcg 157
>gb|AY088273.1| Arabidopsis thaliana clone 5064 mRNA, complete sequence Length = 629 Score = 143 bits (72), Expect = 8e-31 Identities = 243/300 (81%) Strand = Plus / Minus Query: 217 tttgctcgtctccacgatgcaaccgttcatcaccatctcttcgagcatgaagtgcacttt 276 |||||| |||||||| |||||||| ||||||||||| ||||| |||||||| || |||| Sbjct: 458 tttgcttgtctccacaatgcaaccattcatcaccatttcttccagcatgaaatgagcttt 399 Query: 277 ttccagatggaacatgatgtcgagctcgcacacgttgccaaagtggcggtccatggtttc 336 |||||||||||||| ||||| ||||| ||||| || ||||| || |||||| || || Sbjct: 398 ctccagatggaacattatgtctagctcacacacatttccaaaatgcttgtccattgtctc 339 Query: 337 cacgagaagatgtatgaattcaaggatggctaactcattctcatcgttgtccacgccgac 396 || | |||||||||||| || || || || | ||| || ||||||| || || || || Sbjct: 338 gaccaaaagatgtatgaactctagaatcgccagctcgttttcatcgtcatcaaccccaac 279 Query: 397 gaggaagaagagggaggcgtagcgcctgtagacgaccttgtagttccggtgctccacgaa 456 | ||||||||| || ||||| ||||||||||| | ||||||||| || ||||| || || Sbjct: 278 catgaagaagagagatgcgtaacgcctgtagactatcttgtagttgcgatgctcgacaaa 219 Query: 457 agagcactgctggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcg 516 || ||||| |||||| |||| |||||||| || |||||||| ||||| ||||| ||||| Sbjct: 218 cgaacactgttggtcgttgcgagcgaggcatttacggacgatttcgccttcgagagcgcg 159
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 217 tttgctcgtctccacgatgcaaccgttcatcaccatctcttcgagcatgaagtgcacttt 276 |||||| |||||||| |||||||| ||||||||||| ||||| |||||||| || |||| Sbjct: 95045 tttgcttgtctccacaatgcaaccattcatcaccatttcttccagcatgaaatgagcttt 95104 Query: 277 ttccagatggaacatgatgtcgagctc 303 |||||||||||||| ||||| ||||| Sbjct: 95105 ctccagatggaacattatgtctagctc 95131 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 400 gaagaagagggaggcgtagcgcctgtagacgaccttgtagttccggtgctc 450 ||||||||| || ||||| ||||||||||| | ||||||||| || ||||| Sbjct: 95511 gaagaagagagatgcgtaacgcctgtagactatcttgtagttgcgatgctc 95561
>gb|AF528565.1| Zea mays cultivar BSSS53 chromosome 4 clone BAC 072, complete sequence Length = 106246 Score = 69.9 bits (35), Expect = 1e-08 Identities = 67/77 (87%), Gaps = 3/77 (3%) Strand = Plus / Minus Query: 472 ggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcgaggga 531 |||||||| |||||||||| ||||||||| ||||||||||| || |||||||||| | Sbjct: 54874 ggtgcgggtgaggcacttgtggacgatctgaccctcgagggctcgtcgctcgtcgatg-- 54817 Query: 532 agaggtgctcgtagtac 548 |||||||||||||||| Sbjct: 54816 -gaggtgctcgtagtac 54801 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ttgtagttccggtgctccac 453 |||||||||||||||||||| Sbjct: 55143 ttgtagttccggtgctccac 55124
>gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, complete sequence Length = 167687 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 606 ctctcgccctccccttccttcctctcgctccccttcc 642 ||||| |||||||||||||||||||| |||||||||| Sbjct: 34375 ctctccccctccccttccttcctctccctccccttcc 34411 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 614 ctccccttccttcctctcgctcccctt 640 |||||||||||||||||| |||||||| Sbjct: 34438 ctccccttccttcctctccctcccctt 34464
>gb|AC125368.7| Medicago truncatula clone mth2-13h15, complete sequence Length = 124271 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 217 tttgctcgtctccacgatgcaaccgttcatcaccatctcttcgagcatgaagtgcacttt 276 ||||||||||||||| || ||||| ||||| ||||| ||||| | ||| || || || || Sbjct: 72436 tttgctcgtctccacaatacaaccattcatgaccatttcttccaacataaaatgtacctt 72377 Query: 277 ttccagatggaacatgatgtcgagctcgcac 307 ||| | ||| |||||||| || ||||||||| Sbjct: 72376 ttctaaatgaaacatgatatctagctcgcac 72346
>gb|AC135797.13| Medicago truncatula clone mth2-11f7, complete sequence Length = 118242 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 217 tttgctcgtctccacgatgcaaccgttcatcaccatctcttcgagcatgaagtgcacttt 276 ||||||||||||||| || ||||| ||||| ||||| ||||| | ||| || || || || Sbjct: 66407 tttgctcgtctccacaatacaaccattcatgaccatttcttccaacataaaatgtacctt 66348 Query: 277 ttccagatggaacatgatgtcgagctcgcac 307 ||| | ||| |||||||| || ||||||||| Sbjct: 66347 ttctaaatgaaacatgatatctagctcgcac 66317
>ref|XM_363836.1| Magnaporthe grisea 70-15 hypothetical protein (MG01762.4) partial mRNA Length = 432 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 295 gtcgagctcgcacacgttgccaaag 319 ||||||||||||||||||||||||| Sbjct: 309 gtcgagctcgcacacgttgccaaag 285
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 615 tccccttccttcctctcgctccccttc 641 |||||||||||||||||| |||||||| Sbjct: 34023311 tccccttccttcctctcgttccccttc 34023337
>gb|AC144766.18| Medicago truncatula clone mth2-17c2, complete sequence Length = 92099 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 307 cacgttgccaaagtggcggtccatggtttccacgagaagatgtatgaattc 357 |||||||||||| || || ||||||||||| || | |||||||||||||| Sbjct: 81152 cacgttgccaaaatgtcgatccatggtttcgactaagagatgtatgaattc 81102
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 615 tccccttccttcctctcgctccccttc 641 |||||||||||||||||| |||||||| Sbjct: 34113783 tccccttccttcctctcgttccccttc 34113809
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 615 tccccttccttcctctcgctccccttc 641 |||||||||||||||||| |||||||| Sbjct: 34380 tccccttccttcctctcgttccccttc 34354
>gb|AC161055.2| Mus musculus BAC clone RP23-287L7 from chromosome 12, complete sequence Length = 189803 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 621 tccttcctctcgctccccttcc 642 |||||||||||||||||||||| Sbjct: 49179 tccttcctctcgctccccttcc 49200
>ref|XM_744199.1| Aspergillus fumigatus Af293 AP-1 adaptor complex subunit sigma (Afu2g01570) partial mRNA Length = 447 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 atgatgtcgagctcgcacacgttgcc 315 ||||||||||||||||| |||||||| Sbjct: 314 atgatgtcgagctcgcatacgttgcc 289
>ref|XM_799034.1| Trypanosoma cruzi strain CL Brener clathrin coat assembly protein AP19 (Tc00.1047053509623.19) partial mRNA Length = 504 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 296 tcgagctcgcacacgttgccaaagtggcggtcca 329 ||||||||||| || |||||||||| |||||||| Sbjct: 305 tcgagctcgcagacattgccaaagtagcggtcca 272
>ref|XM_803925.1| Trypanosoma cruzi strain CL Brener clathrin coat assembly protein AP19 (Tc00.1047053510003.41) partial mRNA Length = 504 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 296 tcgagctcgcacacgttgccaaagtggcggtcca 329 ||||||||||| || |||||||||| |||||||| Sbjct: 305 tcgagctcgcagacattgccaaagtagcggtcca 272
>gb|AF509532.1| Trypanosoma cruzi clathrin assembly protein AP19-like protein (ClaATc) mRNA, complete cds Length = 504 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 296 tcgagctcgcacacgttgccaaagtggcggtcca 329 ||||||||||| || |||||||||| |||||||| Sbjct: 305 tcgagctcgcagacattgccaaagtagcggtcca 272
>emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cosmid contig 80A10 Length = 161126 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 atgatgtcgagctcgcacacgttgcc 315 ||||||||||||||||| |||||||| Sbjct: 116111 atgatgtcgagctcgcagacgttgcc 116086
>emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on chromosome 11 Contains a novel gene (2210415F13Rik), an NADH dehydrogenase (ubiquinone) Fe-S protein 3 (Ndufs3) pseudogene, a novel pseudogene, a novel gene (1810065E05Rik), a novel gene similar to rat solute carrier family 11 member 1 (Slc11a1), a novel gene, the Olfr30 gene for olfactory receptor 30, an olfactory receptor (MOR284-1P) pseudogene, the gene for olfactory receptor MOR284-2 (LOC216774), a novel gene similar to MOR275 (LOC193140), a ribosomal protein L24 (Rpl24) pseudogene, the gene for olfactory receptor MOR275-1, a DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5) pseudogene, an olfactory receptor (MOR275-3) pseudogene and a CpG island, complete sequence Length = 191700 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Minus Query: 605 tctctcgccctccccttccttcctctcgctccccttcc 642 |||||| |||||||||||| ||||| | |||||||||| Sbjct: 42897 tctctccccctccccttccctcctccccctccccttcc 42860
>gb|AC073548.5| Homo sapiens chromosome 19 clone RP11-43N16, complete sequence Length = 167722 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 599 tccccatctctcgccctccccttcct 624 |||||||||||| ||||||||||||| Sbjct: 104572 tccccatctctctccctccccttcct 104597
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 286 gaacatgatgtcgagctcgcacacgttgcc 315 ||||| ||||||||||||||| |||||||| Sbjct: 1105269 gaacaggatgtcgagctcgcagacgttgcc 1105298 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 290 atgatgtcgagctcgcacacgttgccaaagtggcggtccat 330 |||||||| ||||||||||| || || |||| ||||||||| Sbjct: 662711 atgatgtccagctcgcacacattaccgaagtagcggtccat 662671
>ref|NM_211272.1| Eremothecium gossypii AFR370Cp (AFR370C), mRNA Length = 441 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 286 gaacatgatgtcgagctcgcacacgttgcc 315 ||||| ||||||||||||||| |||||||| Sbjct: 327 gaacaggatgtcgagctcgcagacgttgcc 298
>emb|CT033787.9| Mouse DNA sequence from clone RP24-86C3 on chromosome 12, complete sequence Length = 194345 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 621 tccttcctctcgctccccttcc 642 |||||||||||||||||||||| Sbjct: 124906 tccttcctctcgctccccttcc 124927
>gb|AC132410.4| Mus musculus BAC clone RP23-348E10 from 8, complete sequence Length = 175530 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 614 ctccccttccttcctctcgctcccct 639 |||||||||||||||||| ||||||| Sbjct: 34208 ctccccttccttcctctccctcccct 34233
>ref|NM_011941.2| Mus musculus mitogen activated protein kinase binding protein 1 (Mapkbp1), mRNA Length = 6943 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gacgaggaagaagagggaggc 414 ||||||||||||||||||||| Sbjct: 3465 gacgaggaagaagagggaggc 3485
>ref|XM_652780.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0268.2), mRNA Length = 2382 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 606 ctctcgccctccccttccttc 626 ||||||||||||||||||||| Sbjct: 85 ctctcgccctccccttccttc 105
>gb|BC011271.1| Mus musculus mitogen activated protein kinase binding protein 1, mRNA (cDNA clone IMAGE:3710689), partial cds Length = 4060 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gacgaggaagaagagggaggc 414 ||||||||||||||||||||| Sbjct: 595 gacgaggaagaagagggaggc 615
>ref|XM_754058.1| Ustilago maydis 521 hypothetical protein (UM03004.1) partial mRNA Length = 1086 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 atgatgtcgagctcgcacacgttgccaaa 318 |||| |||||||||||| ||||||||||| Sbjct: 503 atgaggtcgagctcgcaaacgttgccaaa 475
>ref|NM_001003826.1| Danio rerio adaptor-related protein complex 4, sigma 1 subunit (ap4s1), mRNA Length = 423 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 562 gtctgcccctgcttgttcaccagcagcacgaac 594 ||||||||||| |||||||||| ||||| |||| Sbjct: 41 gtctgcccctgtttgttcaccatcagcaggaac 9
>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23, complete sequence Length = 190837 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 ccttccttcctctcgctccccttcc 642 |||||||||||||||||| |||||| Sbjct: 77783 ccttccttcctctcgctctccttcc 77807
>gb|BC114244.1| Danio rerio adaptor-related protein complex 4, sigma 1 subunit, mRNA (cDNA clone MGC:136677 IMAGE:8004037), complete cds Length = 662 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 562 gtctgcccctgcttgttcaccagcagcacgaac 594 ||||||||||| |||||||||| ||||| |||| Sbjct: 167 gtctgcccctgtttgttcaccatcagcaggaac 135
>emb|AL691442.32| Human DNA sequence from clone RP11-540D14 on chromosome 1 Contains the 3' end of the ADAM15 gene for a disintegrin and metalloproteinase domain 15 (metargidin), the EFNA4 gene for ephrin-A4, the EFNA3 gene for ephrin-A3, the EFNA1 gene for ephrin-A1, the gene for a novel protein (LOC55974), the DPM3 gene for dolichyl-phosphate mannosyltransferase polypeptide 3 and four CpG islands, complete sequence Length = 92095 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 599 tccccatctctcgccctcccc 619 ||||||||||||||||||||| Sbjct: 88718 tccccatctctcgccctcccc 88738
>emb|AL390835.14| Human DNA sequence from clone RP5-1119O21 on chromosome 10 Contains the 5' end of a novel gene and a novel gene, complete sequence Length = 65508 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 ccttccttcctctcgctccccttcc 642 |||||||||||||| |||||||||| Sbjct: 33012 ccttccttcctctctctccccttcc 33036
>gb|BC070449.1| Mus musculus mitogen activated protein kinase binding protein 1, mRNA (cDNA clone MGC:91383 IMAGE:30543913), complete cds Length = 6943 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gacgaggaagaagagggaggc 414 ||||||||||||||||||||| Sbjct: 3465 gacgaggaagaagagggaggc 3485
>emb|AL596026.13| Zebrafish DNA sequence from clone BUSM1-234G15 in linkage group 17 Contains the sly1 gene for suppressor of ypt1, a novel gene similar to AP4 (adaptor-related protein complex 4, sigma subunit), the 3' part of the strn3 gene for striatin, calmodulin binding protein 3, a novel gene similar to COCH (coagulation factor C homolog, cochlin), a gene for a novel 7 transmembrane receptor (rhodopsin family) and a novel gene similar to KIAA1333, complete sequence Length = 127993 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 562 gtctgcccctgcttgttcaccagcagcacgaac 594 ||||||||||| |||||||||| ||||| |||| Sbjct: 126526 gtctgcccctgtttgttcaccatcagcaggaac 126494
>gb|AC008021.10| Homo sapiens chromosome 18, clone RP11-504H5, complete sequence Length = 169439 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 603 catctctcgccctccccttcc 623 ||||||||||||||||||||| Sbjct: 51831 catctctcgccctccccttcc 51811
>emb|AL672087.6| Zebrafish DNA sequence from clone BUSM1-115O7 in linkage group 17 Contains the 3' UTR of a novel gene, a novel gene similar to AP4S1 (adaptor-related protein complex 4, sigma 1 subunit) and the 5' part of the strn3 gene for striatin, calmodulin binding protein 3, complete sequence Length = 14900 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 562 gtctgcccctgcttgttcaccagcagcacgaac 594 ||||||||||| |||||||||| ||||| |||| Sbjct: 2869 gtctgcccctgtttgttcaccatcagcaggaac 2901
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete sequence Length = 153540 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 562 gtctgcccctgcttgttcaccagcagcacgaac 594 ||||||||||| |||||||||| ||||| |||| Sbjct: 117921 gtctgcccctgtttgttcaccatcagcaggaac 117889
>gb|BC064274.1| Xenopus tropicalis adaptor-related protein complex 1, sigma 1 subunit, mRNA (cDNA clone MGC:76308 IMAGE:5379780), complete cds Length = 1165 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 atgatgtcgagctcgcacacgttgccaaa 318 |||||||| |||||||||||| ||||||| Sbjct: 349 atgatgtccagctcgcacacgctgccaaa 321
>ref|NM_204007.1| Xenopus tropicalis adaptor-related protein complex 1, sigma 1 subunit (MGC76308), mRNA Length = 1165 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 atgatgtcgagctcgcacacgttgccaaa 318 |||||||| |||||||||||| ||||||| Sbjct: 349 atgatgtccagctcgcacacgctgccaaa 321
>gb|AC090398.12| Homo sapiens chromosome 18, clone RP11-669I1, complete sequence Length = 133378 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 603 catctctcgccctccccttcc 623 ||||||||||||||||||||| Sbjct: 89469 catctctcgccctccccttcc 89449
>gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, complete sequence Length = 203375 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 gccctccccttccttcctctc 631 ||||||||||||||||||||| Sbjct: 137010 gccctccccttccttcctctc 137030
>gb|AY267354.1| Emericella nidulans MesA (mesA) gene, complete cds Length = 2693 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 606 ctctcgccctccccttccttc 626 ||||||||||||||||||||| Sbjct: 298 ctctcgccctccccttccttc 318
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 613 cctccccttccttcctctcgctccc 637 |||| |||||||||||||||||||| Sbjct: 17734299 cctctccttccttcctctcgctccc 17734275
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 ccttccttcctctcgctccccttcc 642 |||||||| |||||||||||||||| Sbjct: 732334 ccttcctttctctcgctccccttcc 732358
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 613 cctccccttccttcctctcgctccc 637 |||| |||||||||||||||||||| Sbjct: 42933 cctctccttccttcctctcgctccc 42909
>dbj|AK122323.1| Mus musculus mRNA for mKIAA0596 protein Length = 6222 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gacgaggaagaagagggaggc 414 ||||||||||||||||||||| Sbjct: 2164 gacgaggaagaagagggaggc 2184
>ref|NM_211025.1| Eremothecium gossypii AFR124Wp (AFR124W), mRNA Length = 471 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 290 atgatgtcgagctcgcacacgttgccaaagtggcggtccat 330 |||||||| ||||||||||| || || |||| ||||||||| Sbjct: 320 atgatgtccagctcgcacacattaccgaagtagcggtccat 280
>emb|CR942724.2| Xenopus tropicalis finished cDNA, clone TNeu023d20 Length = 1124 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 atgatgtcgagctcgcacacgttgccaaa 318 |||||||| |||||||||||| ||||||| Sbjct: 335 atgatgtccagctcgcacacgctgccaaa 307
>emb|AL162511.5|CNS01RHV Human chromosome 14 DNA sequence BAC R-259K15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165126 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 611 gccctccccttccttcctctc 631 ||||||||||||||||||||| Sbjct: 120116 gccctccccttccttcctctc 120096
>emb|AL356803.2|CNS05TDL Human chromosome 14 DNA sequence Partial sequence from BAC C-2130G23 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 88380 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 611 gccctccccttccttcctctc 631 ||||||||||||||||||||| Sbjct: 26217 gccctccccttccttcctctc 26197
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 502 gccctcgagggcgcggcgctcgtcg 526 ||||||| ||||||||||||||||| Sbjct: 1848295 gccctcgcgggcgcggcgctcgtcg 1848319
>gb|AC117208.3| Mus musculus BAC clone RP23-279D15 from 10, complete sequence Length = 174202 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 617 cccttccttcctctcgctccccttc 641 ||||||||||||||| ||||||||| Sbjct: 100195 cccttccttcctctccctccccttc 100171
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199, complete sequence Length = 123325 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 cgacgaggaagaagagggagg 413 ||||||||||||||||||||| Sbjct: 60681 cgacgaggaagaagagggagg 60701
>emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chromosome 2, complete sequence Length = 194045 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 gacgaggaagaagagggaggc 414 ||||||||||||||||||||| Sbjct: 165620 gacgaggaagaagagggaggc 165600
>dbj|AB029482.1| Mus musculus mRNA for JNK-binding protein JNKBP1, complete cds Length = 4684 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gacgaggaagaagagggaggc 414 ||||||||||||||||||||| Sbjct: 3279 gacgaggaagaagagggaggc 3299
>ref|NM_100608.2| Arabidopsis thaliana ATSTP2; carbohydrate transporter/ sugar porter AT1G07340 (ATSTP2) mRNA, complete cds Length = 1685 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 ccgacgaggaagaagagggaggcg 415 |||||||||||||||| ||||||| Sbjct: 416 ccgacgaggaagaagatggaggcg 393
>gb|AC166365.4| Mus musculus BAC clone RP24-428H14 from chromosome 9, complete sequence Length = 172948 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 ctcgccctccccttccttcctctc 631 |||||||||||||||| ||||||| Sbjct: 17845 ctcgccctccccttccctcctctc 17822
>gb|U72484.1| Fugu rubripes RNA helicase (RNA-H) gene, partial cds; calcium channel beta3 subunit (CAB3B), adenylyl cyclase type VI (AC-VI), glucose-6-phosphate dehydrogenase (G6PD), and L-glycerol-3-phosphate (LG3P) genes, complete cds; and sodium channel 2 (BNaC2) gene, partial cds Length = 61901 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 atttctcctcacacaaaagaggaa 143 |||||| ||||||||||||||||| Sbjct: 1881 atttctactcacacaaaagaggaa 1904
>gb|AF002991.1|HSAF002991 Homo sapiens cosmid, complete sequence Length = 37165 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 606 ctctcgccctccccttccttcctctcgctccc 637 ||||| |||| ||||||||||||||| ||||| Sbjct: 20067 ctctcccccttcccttccttcctctccctccc 20098
>gb|AC165225.5| Mus musculus chromosome 3, clone RP24-70J13, complete sequence Length = 205069 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 77124 ccctccccttccttcctctc 77105
>gb|AC125021.12| Mus musculus chromosome 1, clone RP24-212P5, complete sequence Length = 174626 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 123270 ccctccccttccttcctctc 123289
>gb|AC132875.8| Mus musculus chromosome 15, clone RP24-381O23, complete sequence Length = 185786 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccatgcatacagcagttgtc 115 |||||||||||||||||||| Sbjct: 164038 ccatgcatacagcagttgtc 164019
>gb|AC115722.12| Mus musculus chromosome 5, clone RP23-16N23, complete sequence Length = 194380 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 186922 ccctccccttccttcctctc 186941
>ref|XM_952899.1| Neurospora crassa OR74A hypothetical protein (NCU07364.1) partial mRNA Length = 879 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 614 ctccccttccttcctctcgctccccttc 641 |||||||| ||||||||||||| ||||| Sbjct: 669 ctcccctttcttcctctcgctctccttc 642
>ref|XM_327649.1| Neurospora crassa OR74A hypothetical protein (NCU07364.1) partial mRNA Length = 879 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 614 ctccccttccttcctctcgctccccttc 641 |||||||| ||||||||||||| ||||| Sbjct: 669 ctcccctttcttcctctcgctctccttc 642
>gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosome 7, complete sequence Length = 200592 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 gccctccccttccttcctct 630 |||||||||||||||||||| Sbjct: 173483 gccctccccttccttcctct 173502 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 gccctccccttccttcctct 630 |||||||||||||||||||| Sbjct: 173339 gccctccccttccttcctct 173358
>ref|XM_654665.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2153.2), mRNA Length = 975 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 aggaagaagagggaggcgta 417 |||||||||||||||||||| Sbjct: 262 aggaagaagagggaggcgta 243
>gb|AC121119.12| Mus musculus chromosome 1, clone RP23-395D10, complete sequence Length = 221436 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 70832 ccctccccttccttcctctc 70813
>gb|AC164640.4| Mus musculus BAC clone RP23-228M12 from chromosome 7, complete sequence Length = 232468 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 gccctccccttccttcctct 630 |||||||||||||||||||| Sbjct: 169797 gccctccccttccttcctct 169778 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 gccctccccttccttcctct 630 |||||||||||||||||||| Sbjct: 169653 gccctccccttccttcctct 169634
>gb|AC114605.11| Mus musculus chromosome 5, clone RP23-373H20, complete sequence Length = 163969 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 17886 ccctccccttccttcctctc 17905
>gb|AC162389.6| Mus musculus 6 BAC RP24-114M8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189477 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 88133 ccctccccttccttcctctc 88114
>ref|XM_747091.1| Aspergillus fumigatus Af293 pH signal transduction protein PalA (Afu4g06400) partial mRNA Length = 2505 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 cgaaccggatccccatctct 609 |||||||||||||||||||| Sbjct: 2440 cgaaccggatccccatctct 2421
>gb|AC121784.2| Mus musculus BAC clone RP23-378G4 from 12, complete sequence Length = 163125 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 607 tctcgccctccccttccttcctctcgctccccttcc 642 |||| |||||||||||| ||| ||| |||||||||| Sbjct: 103288 tctccccctccccttccctcccctccctccccttcc 103323
>gb|AC004963.2| Homo sapiens PAC clone RP5-1102A12 from 7, complete sequence Length = 173627 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 98135 ccctccccttccttcctctc 98116
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 39828 ccctccccttccttcctctc 39847 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 39788 ccctccccttccttcctctc 39807
>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence Length = 211521 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 119288 ccctccccttccttcctctc 119307 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 119248 ccctccccttccttcctctc 119267
>emb|AL683871.15| Human DNA sequence from clone RP13-76L22 on chromosome X, complete sequence Length = 175765 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 606 ctctcgccctccccttccttcctctcgctccc 637 ||||| |||| ||||||||||||||| ||||| Sbjct: 40727 ctctcccccttcccttccttcctctccctccc 40758
>gb|AC109542.6| Rattus norvegicus 1 BAC CH230-270O15 (Children's Hospital Oakland Research Institute) complete sequence Length = 246913 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 72308 ccctccccttccttcctctc 72289
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cgctcgtcgagggaagaggt 537 |||||||||||||||||||| Sbjct: 1010753 cgctcgtcgagggaagaggt 1010772
>emb|AL929545.8| Mouse DNA sequence from clone RP23-306I3 on chromosome 11 Contains the 3' end of a novel gene, complete sequence Length = 198821 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcaaggatggctaactcatt 375 |||||||||||||||||||| Sbjct: 193932 tcaaggatggctaactcatt 193913
>gb|AY125925.1| Toxoplasma gondii protein phosphatase 2B catalytic subunit (CNA) mRNA, complete cds Length = 3065 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 tctctcgccctccccttcct 624 |||||||||||||||||||| Sbjct: 1816 tctctcgccctccccttcct 1835
>gb|AC022164.8| Homo sapiens chromosome 16 clone RP11-513N24, complete sequence Length = 208207 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 613 cctccccttccttcctctcgctcccctt 640 |||| |||||||||||||| |||||||| Sbjct: 155795 cctctccttccttcctctccctcccctt 155822
>gb|AC025205.12| Homo sapiens chromosome 17, clone RP11-140O10, complete sequence Length = 188417 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 151386 ccctccccttccttcctctc 151405
>gb|AC104122.2| Homo sapiens chromosome 5 clone RP11-410P18, complete sequence Length = 142636 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctcg-ctccccttcc 642 |||||||||||||||| |||| |||||||||| Sbjct: 115274 ccctccccttccttcccctcgcctccccttcc 115243
>gb|AC093510.2| Homo sapiens chromosome 5 clone CTD-2373J6, complete sequence Length = 125933 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctcg-ctccccttcc 642 |||||||||||||||| |||| |||||||||| Sbjct: 40805 ccctccccttccttcccctcgcctccccttcc 40774
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cgacgaggaagaagagggag 412 |||||||||||||||||||| Sbjct: 4301283 cgacgaggaagaagagggag 4301264
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cgacgaggaagaagagggag 412 |||||||||||||||||||| Sbjct: 3771228 cgacgaggaagaagagggag 3771247
>emb|BX813610.1|CNS0AALW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1690 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 ccgacgaggaagaagagggaggcg 415 |||||||||||||||| ||||||| Sbjct: 414 ccgacgaggaagaagatggaggcg 391
>gb|AC022464.4|AC022464 Genomic sequence for Arabidopsis thaliana BAC F22G5 from chromosome I, complete sequence Length = 104830 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 ccgacgaggaagaagagggaggcg 415 |||||||||||||||| ||||||| Sbjct: 88740 ccgacgaggaagaagatggaggcg 88763
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 cctcgagggcgcggcgctcg 523 |||||||||||||||||||| Sbjct: 2703055 cctcgagggcgcggcgctcg 2703074
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cgacgaggaagaagagggag 412 |||||||||||||||||||| Sbjct: 10340 cgacgaggaagaagagggag 10359
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cgacgaggaagaagagggag 412 |||||||||||||||||||| Sbjct: 115579 cgacgaggaagaagagggag 115598
>gb|AC154557.2| Mus musculus BAC clone RP23-425M9 from 17, complete sequence Length = 186378 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 604 atctctcgccctccccttccttcctctc 631 ||||||| |||||||| ||||||||||| Sbjct: 79903 atctctctccctccccctccttcctctc 79930
>emb|CT030256.13| Mouse DNA sequence from clone RP23-346K5 on chromosome 13, complete sequence Length = 197972 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctcgctcccct 639 ||||||||||||||||| || ||||||| Sbjct: 24291 ccctccccttccttcctttccctcccct 24264
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 8900 ccctccccttccttcctctc 8881 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 8860 ccctccccttccttcctctc 8841
>gb|AC172989.2| Mus musculus BAC clone RP24-556J6 from chromosome 15, complete sequence Length = 184996 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccatgcatacagcagttgtc 115 |||||||||||||||||||| Sbjct: 3221 ccatgcatacagcagttgtc 3202
>dbj|AP001086.7| Homo sapiens genomic DNA, chromosome 18 clone:RP11-681N23, complete sequence Length = 185603 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 cacaaccacccatgcataca 106 |||||||||||||||||||| Sbjct: 69142 cacaaccacccatgcataca 69123
>gb|AC005900.1|AC005900 Homo sapiens chromosome 17, clone hRPK.998_F_8, complete sequence Length = 175066 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 27139 ccctccccttccttcctctc 27158
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 ccgacgaggaagaagaggga 411 |||||||||||||||||||| Sbjct: 1031485 ccgacgaggaagaagaggga 1031504
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cgacgaggaagaagagggag 412 |||||||||||||||||||| Sbjct: 4301270 cgacgaggaagaagagggag 4301251
>emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa0056M17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178147 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cgacgaggaagaagagggag 412 |||||||||||||||||||| Sbjct: 150428 cgacgaggaagaagagggag 150447
>emb|CT030155.10| Mouse DNA sequence from clone RP23-425N11 on chromosome 17, complete sequence Length = 189713 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 604 atctctcgccctccccttccttcctctc 631 ||||||| |||||||| ||||||||||| Sbjct: 113792 atctctctccctccccctccttcctctc 113819
>gb|AC134523.5| Mus musculus BAC clone RP24-492M8 from 5, complete sequence Length = 178801 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctc 631 |||||||||||||||||||| Sbjct: 120371 ccctccccttccttcctctc 120352
>gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromosome unknown, complete sequence Length = 158903 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 atgatggggtcttcattttcagca 52 |||||||| ||||||||||||||| Sbjct: 18899 atgatgggatcttcattttcagca 18876
>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073, complete sequence Length = 90077 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 599 tccccatctctcgccctccccttc 622 ||||||||||| |||||||||||| Sbjct: 12690 tccccatctcttgccctccccttc 12713
>gb|AC164565.1| Mus musculus BAC clone RP23-99O13 from chromosome 9, complete sequence Length = 227367 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 608 ctcgccctccccttccttcctctc 631 |||||||||||||||| ||||||| Sbjct: 7821 ctcgccctccccttccctcctctc 7844
>gb|AC164877.2| Mus musculus BAC clone RP24-340N21 from chromosome 13, complete sequence Length = 179184 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 612 ccctccccttccttcctctcgctcccct 639 ||||||||||||||||| || ||||||| Sbjct: 24168 ccctccccttccttcctttccctcccct 24141
>dbj|D88268.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:47H9 Length = 44553 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 619 cttccttcctctcgctccccttcc 642 |||| ||||||||||||||||||| Sbjct: 14026 cttcattcctctcgctccccttcc 14003
>dbj|D87008.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:47H9 upstream contig Length = 30965 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 619 cttccttcctctcgctccccttcc 642 |||| ||||||||||||||||||| Sbjct: 14026 cttcattcctctcgctccccttcc 14003 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,014,219 Number of Sequences: 3902068 Number of extensions: 6014219 Number of successful extensions: 122320 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 121237 Number of HSP's gapped (non-prelim): 1061 length of query: 654 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 631 effective length of database: 17,143,297,704 effective search space: 10817420851224 effective search space used: 10817420851224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
