>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  404 bits (1037), Expect = e-112
 Identities = 196/196 (100%), Positives = 196/196 (100%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP
Sbjct: 269 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 328

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH
Sbjct: 329 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 388

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKN 146
           MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKN
Sbjct: 389 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKN 448

Query: 145 YDPTARSDDGSCLYTF 98
           YDPTARSDDGSCLYTF
Sbjct: 449 YDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  328 bits (842), Expect = 7e-90
 Identities = 155/198 (78%), Positives = 176/198 (88%), Gaps = 2/198 (1%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFP
Sbjct: 279 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFP 338

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG 
Sbjct: 339 GQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGG 398

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNA 152
           MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG  A Q  G +PVPEGCTD  A
Sbjct: 399 MLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQA 458

Query: 151 KNYDPTARSDDGSCLYTF 98
            NYDPTARSDDGSC+Y F
Sbjct: 459 TNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  327 bits (839), Expect = 2e-89
 Identities = 154/196 (78%), Positives = 175/196 (89%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+ TGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FP
Sbjct: 279 PIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFP 338

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+
Sbjct: 339 GQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGN 398

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKN 146
           MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYGKGAQQ  LPVPEGCTD  A+N
Sbjct: 399 MLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAEN 458

Query: 145 YDPTARSDDGSCLYTF 98
           +DPTARSDDG+C+Y F
Sbjct: 459 FDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  325 bits (832), Expect = 1e-88
 Identities = 152/194 (78%), Positives = 173/194 (89%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TD V  E VVK+VD FP
Sbjct: 277 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFP 336

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+
Sbjct: 337 GQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGN 396

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKN 146
           MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+GK AQQ +LPV +GCTD  AKN
Sbjct: 397 MLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKN 456

Query: 145 YDPTARSDDGSCLY 104
           YDPTARSDDGSC Y
Sbjct: 457 YDPTARSDDGSCTY 470

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  293 bits (751), Expect = 3e-79
 Identities = 137/160 (85%), Positives = 152/160 (95%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFP
Sbjct: 266 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFP 325

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGH
Sbjct: 326 GQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGH 385

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGK 206
           MLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYGK
Sbjct: 386 MLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  291 bits (746), Expect = 1e-78
 Identities = 136/159 (85%), Positives = 151/159 (94%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FP
Sbjct: 269 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFP 328

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+
Sbjct: 329 GQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGY 388

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 209
           MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 389 MLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  279 bits (713), Expect = 7e-75
 Identities = 129/159 (81%), Positives = 149/159 (93%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFP
Sbjct: 279 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFP 338

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+
Sbjct: 339 GQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGN 398

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 209
           MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 399 MLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  278 bits (711), Expect = 1e-74
 Identities = 128/158 (81%), Positives = 149/158 (94%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFP
Sbjct: 275 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFP 334

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGH
Sbjct: 335 GQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGH 394

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 212
           MLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 395 MLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  277 bits (709), Expect = 2e-74
 Identities = 132/157 (84%), Positives = 147/157 (93%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFP
Sbjct: 283 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFP 342

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+
Sbjct: 343 GQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGN 402

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 215
           MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 403 MLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  276 bits (705), Expect = 6e-74
 Identities = 131/155 (84%), Positives = 147/155 (94%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FP
Sbjct: 278 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFP 337

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+
Sbjct: 338 GQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGN 397

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 221
           MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 398 MLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  275 bits (704), Expect = 7e-74
 Identities = 127/157 (80%), Positives = 147/157 (93%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FP
Sbjct: 279 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFP 338

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+
Sbjct: 339 GQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGN 398

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 215
           MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 399 MLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  271 bits (694), Expect = 1e-72
 Identities = 130/158 (82%), Positives = 142/158 (89%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FP
Sbjct: 283 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFP 342

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+
Sbjct: 343 GQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGN 402

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 212
           MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 403 MLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  267 bits (682), Expect = 3e-71
 Identities = 120/158 (75%), Positives = 147/158 (93%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFP
Sbjct: 281 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFP 340

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+
Sbjct: 341 GQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGN 400

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 212
           MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 401 MLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  258 bits (660), Expect = 9e-69
 Identities = 117/158 (74%), Positives = 145/158 (91%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD  P
Sbjct: 283 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHP 342

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  
Sbjct: 343 GQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYAS 402

Query: 325 MLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 212
           MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 403 MLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  226 bits (576), Expect = 5e-59
 Identities = 104/134 (77%), Positives = 120/134 (89%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFP
Sbjct: 276 PIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFP 335

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+
Sbjct: 336 GQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGN 395

Query: 325 MLVQEQDNVKRVQL 284
           MLV EQ+NVKRV+L
Sbjct: 396 MLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  198 bits (503), Expect = 1e-50
 Identities = 97/144 (67%), Positives = 113/144 (78%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PIV TGNDFSTLYAPLIRDGRMEK+YW PTR+DRIGVC GIFQ DNV    V  +VDTFP
Sbjct: 252 PIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFP 311

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
           GQSIDFFGALRARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L++YG 
Sbjct: 312 GQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGK 370

Query: 325 MLVQEQDNVKRVQLADTYMSQAAL 254
            LV EQ+NVKRVQLAD Y+S A L
Sbjct: 371 SLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  168 bits (425), Expect = 2e-41
 Identities = 75/138 (54%), Positives = 101/138 (73%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYW P RD+++G+  GIF  D +S   V K+VD+FP
Sbjct: 152 PIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFP 211

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
            QSIDFF ALR+R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+E  +
Sbjct: 212 NQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESAN 271

Query: 325 MLVQEQDNVKRVQLADTY 272
            +V EQ  ++  QL D Y
Sbjct: 272 FMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  162 bits (411), Expect = 7e-40
 Identities = 74/138 (53%), Positives = 99/138 (71%)
 Frame = -3

Query: 685 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 506
           PI+VTGNDFSTLYAPLIRDGRMEKFYW P RDD++G+  GIF  D +S   + ++VDTFP
Sbjct: 152 PIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFP 211

Query: 505 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 326
            QSIDFF ALR+R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+E G+
Sbjct: 212 KQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGN 271

Query: 325 MLVQEQDNVKRVQLADTY 272
           +++ EQ  V   QL D Y
Sbjct: 272 LVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -3

Query: 523 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 344
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
 Frame = +2

Query: 212  VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXXEGHGPVP 391
            VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671  VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 392  RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 562
            + +  +A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E 
Sbjct: 729  KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780

Query: 563  -DTLADTDTVVTGGSPVELLHTTITD 637
               L   + V+  G PV   H  + D
Sbjct: 781  WTQLGHNEPVIDAGWPVFDAHALVQD 806

>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 23) (DHHC-23)
          Length = 409

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = +3

Query: 171 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 347
           P G+ K+P  +P   KE       L  P  AW   +   C  R+   C W + C   S+ 
Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301

Query: 348 STVI 359
              I
Sbjct: 302 QAFI 305

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 440 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 565
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -3

Query: 526 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 347
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 346 KLLEYGHMLVQEQDNVKRV 290
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = +2

Query: 527 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 661
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGVPIKIIMEAI-QQASVAKKE 584

Query: 662 IV 667
           I+
Sbjct: 585 IL 586

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 276 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 380
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1)
          Length = 783

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = +2

Query: 527 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 661
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 662 IV 667
           I+
Sbjct: 585 IL 586

>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = +2

Query: 527 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 661
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 662 IV 667
           I+
Sbjct: 585 IL 586

>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier|
           family 20 member 1-B)
          Length = 685

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +2

Query: 101 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCLAHV 274
           G++   ++AP  W++VLG ++     F  G + +  SF   GT++   +V++ Q+C+   
Sbjct: 15  GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACIL-- 69

Query: 275 GVSKLHTLDIVLL 313
             S   T+  VLL
Sbjct: 70  -ASIFETVGSVLL 81

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -3

Query: 442 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 335
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial|
           protein
          Length = 442

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 19/36 (52%), Positives = 21/36 (58%)
 Frame = -2

Query: 224 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 117
           +FL R RS  R  AR     R K Q LRPNG E+RR
Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,827,632
Number of Sequences: 219361
Number of extensions: 1917542
Number of successful extensions: 5850
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5847
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)