ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3g13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016379.1| Zea mays clone Contig212 mRNA sequence Length = 1020 Score = 206 bits (104), Expect = 7e-50 Identities = 167/188 (88%) Strand = Plus / Minus Query: 224 cctagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtcca 283 ||||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| Sbjct: 632 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 573 Query: 284 tggccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgc 343 |||| |||| ||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 572 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagcgcgc 513 Query: 344 agtagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggtgc 403 |||| | |||||| ||||||||||||||||| |||||||| |||||||| ||||||| || Sbjct: 512 agtacaagttcccacaccggcagttgaatcccgtgagcccaaccctcttcctgcaggcgc 453 Query: 404 tgcaccgg 411 |||||||| Sbjct: 452 tgcaccgg 445 Score = 119 bits (60), Expect = 1e-23 Identities = 97/108 (89%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 556 ccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatcgcc 615 ||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||| | | Sbjct: 285 ccgttcacgatgctgtcgatagaggaggcagccagcttggcctgatcctgcttcgttatc 226 Query: 616 atcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 225 atct-ccttgtggcacttagagcacatgttcatggtcgccgcgctgcc 179 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 15 gagacgaccataaataaagcttacacaacatagccaaca 53 ||||| |||||||||| |||||||||||||||||||||| Sbjct: 878 gagaccaccataaatagagcttacacaacatagccaaca 840
>gb|AY109331.1| Zea mays CL253_2 mRNA sequence Length = 2256 Score = 202 bits (102), Expect = 1e-48 Identities = 165/186 (88%) Strand = Plus / Minus Query: 226 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 285 ||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| || Sbjct: 1610 tagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccctg 1551 Query: 286 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 345 || |||| ||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1550 gcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagcgcgcag 1491 Query: 346 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggtgctg 405 || | |||||| ||||||||||||||||| |||||||| |||||||| ||||||| |||| Sbjct: 1490 tacaagttcccacaccggcagttgaatcccgtgagcccaaccctcttcctgcaggcgctg 1431 Query: 406 caccgg 411 |||||| Sbjct: 1430 caccgg 1425 Score = 127 bits (64), Expect = 5e-26 Identities = 98/108 (90%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 556 ccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatcgcc 615 ||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||| | | Sbjct: 1265 ccgttcacgatgctgtcgatagaggaggcagccagcttggcctgatcctgcttcgttatc 1206 Query: 616 atcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1205 atct-ccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 1159
>gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complete cds Length = 1000 Score = 182 bits (92), Expect = 1e-42 Identities = 164/188 (87%) Strand = Plus / Minus Query: 224 cctagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtcca 283 ||||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| Sbjct: 616 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 557 Query: 284 tggccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgc 343 |||| |||| ||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 556 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagtgcgc 497 Query: 344 agtagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggtgc 403 |||| | |||||| ||||||||||||||||| || || || |||||||| ||||||| || Sbjct: 496 agtacaagttcccacaccggcagttgaatcccgtaagtccaaccctcttcctgcaggcgc 437 Query: 404 tgcaccgg 411 |||||||| Sbjct: 436 tgcaccgg 429 Score = 127 bits (64), Expect = 5e-26 Identities = 98/108 (90%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 556 ccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatcgcc 615 ||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||| | | Sbjct: 269 ccgttcacgatgctgtcgatagaggaggcagccagcttggcctgatcctgcttcgttatc 210 Query: 616 atcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 atct-ccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 163 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 15 gagacgaccataaataaagcttacacaacatagccaaca 53 ||||| |||||||||| |||||||||||||||||||||| Sbjct: 860 gagaccaccataaatagagcttacacaacatagccaaca 822
>gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence Length = 941 Score = 182 bits (92), Expect = 1e-42 Identities = 164/188 (87%) Strand = Plus / Minus Query: 224 cctagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtcca 283 ||||||||||| ||||||| || |||||||||||||| || |||||||| ||||||||| Sbjct: 638 cctagatcttggcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 579 Query: 284 tggccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgc 343 |||| |||| ||||||||||||||||| ||||||||||| ||||| ||||| ||| | Sbjct: 578 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtaccggtggagcgccc 519 Query: 344 agtagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggtgc 403 |||| | |||||| ||||||||||||||||| |||||||| |||||||| ||||||| || Sbjct: 518 agtacaagttcccacaccggcagttgaatcccgtgagcccaaccctcttcctgcaggcgc 459 Query: 404 tgcaccgg 411 |||||||| Sbjct: 458 tgcaccgg 451 Score = 119 bits (60), Expect = 1e-23 Identities = 97/108 (89%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 556 ccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatcgcc 615 ||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||| | | Sbjct: 291 ccgttcacgatgctgtcgatagaggaggcagccagcttggcctgatcctgcttcgttatc 232 Query: 616 atcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 231 atct-ccttgtggcacttagagcacatgttcatggtcgccgcgctgcc 185 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 15 gagacgaccataaataaagcttacacaacatagccaaca 53 ||||| |||||| || |||||||||||||||||||||| Sbjct: 884 gagaccaccataggtagagcttacacaacatagccaaca 846
>ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.15 mRNA Length = 1000 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Minus Query: 226 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 285 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 681 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 622 Query: 286 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 345 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 621 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 562 Query: 346 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 401 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 561 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 506 Score = 109 bits (55), Expect = 1e-20 Identities = 80/87 (91%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 577 gaggaggcggccagcttggcctgctcctgcttcatcgccatcttccttgtggcacttgga 636 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 318 gaggaggcagcaagcttggcctgctcctccttcatgatcatct-ccttgtggcacttgga 260 Query: 637 gcacatgttcatggtcgccgcgctgcc 663 ||||||||||||||||||||||||||| Sbjct: 259 gcacatgttcatggtcgccgcgctgcc 233
>ref|XM_464458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 991 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Minus Query: 226 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 285 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 664 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 605 Query: 286 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 345 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 604 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 545 Query: 346 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 401 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 544 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 489 Score = 109 bits (55), Expect = 1e-20 Identities = 80/87 (91%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 577 gaggaggcggccagcttggcctgctcctgcttcatcgccatcttccttgtggcacttgga 636 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 301 gaggaggcagcaagcttggcctgctcctccttcatgatcatct-ccttgtggcacttgga 243 Query: 637 gcacatgttcatggtcgccgcgctgcc 663 ||||||||||||||||||||||||||| Sbjct: 242 gcacatgttcatggtcgccgcgctgcc 216
>gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, complete cds Length = 1162 Score = 174 bits (88), Expect = 2e-40 Identities = 163/188 (86%) Strand = Plus / Minus Query: 224 cctagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtcca 283 ||||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| Sbjct: 808 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 749 Query: 284 tggccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgc 343 |||| |||| ||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 748 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagtgcgc 689 Query: 344 agtagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggtgc 403 |||| | |||||| ||||||||||||||||| || || || ||||| || ||||||| || Sbjct: 688 agtacaagttcccacaccggcagttgaatcccgtaagtccaacccttttcctgcaggcgc 629 Query: 404 tgcaccgg 411 |||||||| Sbjct: 628 tgcaccgg 621 Score = 123 bits (62), Expect = 8e-25 Identities = 93/102 (91%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 562 acgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatcgccatcttc 621 ||||||||||| | ||||||||| |||||||||||||| ||||||||| | ||||| | Sbjct: 455 acgatgctgtcgatagaggaggcagccagcttggcctgatcctgcttcgttatcatct-c 397 Query: 622 cttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 cttgtggcacttggagcacatgttcatggtcgccgcgctgcc 355 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 15 gagacgaccataaataaagcttacacaacatagccaaca 53 ||||| |||||||||| |||||||||||||||||||||| Sbjct: 1055 gagaccaccataaatagagcttacacaacatagccaaca 1017
>dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A06, full insert sequence Length = 991 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Minus Query: 226 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 285 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 664 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 605 Query: 286 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 345 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 604 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 545 Query: 346 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 401 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 544 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 489 Score = 109 bits (55), Expect = 1e-20 Identities = 80/87 (91%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 577 gaggaggcggccagcttggcctgctcctgcttcatcgccatcttccttgtggcacttgga 636 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 301 gaggaggcagcaagcttggcctgctcctccttcatgatcatct-ccttgtggcacttgga 243 Query: 637 gcacatgttcatggtcgccgcgctgcc 663 ||||||||||||||||||||||||||| Sbjct: 242 gcacatgttcatggtcgccgcgctgcc 216
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Plus Query: 226 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 285 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 5346037 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 5346096 Query: 286 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 345 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 5346097 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 5346156 Query: 346 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 401 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 5346157 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 5346212 Score = 109 bits (55), Expect = 1e-20 Identities = 80/87 (91%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 577 gaggaggcggccagcttggcctgctcctgcttcatcgccatcttccttgtggcacttgga 636 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 5346400 gaggaggcagcaagcttggcctgctcctccttcatgatcatct-ccttgtggcacttgga 5346458 Query: 637 gcacatgttcatggtcgccgcgctgcc 663 ||||||||||||||||||||||||||| Sbjct: 5346459 gcacatgttcatggtcgccgcgctgcc 5346485
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Plus Query: 226 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 285 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 72340 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 72399 Query: 286 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 345 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 72400 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 72459 Query: 346 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 401 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 72460 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 72515 Score = 109 bits (55), Expect = 1e-20 Identities = 80/87 (91%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 577 gaggaggcggccagcttggcctgctcctgcttcatcgccatcttccttgtggcacttgga 636 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 72703 gaggaggcagcaagcttggcctgctcctccttcatgatcatct-ccttgtggcacttgga 72761 Query: 637 gcacatgttcatggtcgccgcgctgcc 663 ||||||||||||||||||||||||||| Sbjct: 72762 gcacatgttcatggtcgccgcgctgcc 72788
>dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106E09, full insert sequence Length = 1000 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Minus Query: 226 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 285 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 681 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 622 Query: 286 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 345 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 621 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 562 Query: 346 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 401 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 561 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 506 Score = 109 bits (55), Expect = 1e-20 Identities = 80/87 (91%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 577 gaggaggcggccagcttggcctgctcctgcttcatcgccatcttccttgtggcacttgga 636 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 318 gaggaggcagcaagcttggcctgctcctccttcatgatcatct-ccttgtggcacttgga 260 Query: 637 gcacatgttcatggtcgccgcgctgcc 663 ||||||||||||||||||||||||||| Sbjct: 259 gcacatgttcatggtcgccgcgctgcc 233
>gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-associated protein-3 (SAP-3) mRNA, complete cds Length = 1132 Score = 117 bits (59), Expect = 5e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 553 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 612 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 242 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 183 Query: 613 gccatcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 182 atcatc-tccttgtggcactttgagcacatgttcatggtagccgcactgcc 133 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 569 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 510 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 351 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 509 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 450 Query: 352 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 392 || || || ||||||||||||||||| || || |||||||| Sbjct: 449 ttgccacatcggcagttgaatccggtaagaccaaccctctt 409 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 799 agacgatcataaataaagcttacacaacatagccaaca 762
>gb|DQ083230.1| Oryza sativa (indica cultivar-group) clone 3B12G81 mRNA sequence Length = 449 Score = 117 bits (59), Expect = 5e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 553 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 612 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 237 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 178 Query: 613 gccatcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 177 atcatc-tccttgtggcactttgagcacatgttcatggtagccgcactgcc 128 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 361 cggcagttgaatccggtgagcccgaccctctt 392 ||||||||||||||||| || || |||||||| Sbjct: 435 cggcagttgaatccggtaagaccaaccctctt 404
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 117 bits (59), Expect = 5e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 553 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 612 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 24109587 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 24109528 Query: 613 gccatcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 24109527 atcatc-tccttgtggcactttgagcacatgttcatggtagccgcactgcc 24109478 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 24109914 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 24109855 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 351 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 24109854 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 24109795 Query: 352 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 392 || || || ||||||||||||||||| || || |||||||| Sbjct: 24109794 ttgccacatcggcagttgaatccggtaagaccaaccctctt 24109754 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 24110144 agacgatcataaataaagcttacacaacatagccaaca 24110107
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 117 bits (59), Expect = 5e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 553 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 612 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 43045 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 42986 Query: 613 gccatcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 42985 atcatc-tccttgtggcactttgagcacatgttcatggtagccgcactgcc 42936 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 43372 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 43313 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 351 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 43312 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 43253 Query: 352 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 392 || || || ||||||||||||||||| || || |||||||| Sbjct: 43252 ttgccacatcggcagttgaatccggtaagaccaaccctctt 43212 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 43602 agacgatcataaataaagcttacacaacatagccaaca 43565
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 117 bits (59), Expect = 5e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 553 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 612 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 119280 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 119221 Query: 613 gccatcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 119220 atcatc-tccttgtggcactttgagcacatgttcatggtagccgcactgcc 119171 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 119607 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 119548 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 351 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 119547 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 119488 Query: 352 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 392 || || || ||||||||||||||||| || || |||||||| Sbjct: 119487 ttgccacatcggcagttgaatccggtaagaccaaccctctt 119447 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 119837 agacgatcataaataaagcttacacaacatagccaaca 119800
>dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D03, full insert sequence Length = 999 Score = 117 bits (59), Expect = 5e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 553 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 612 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 331 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 272 Query: 613 gccatcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 271 atcatc-tccttgtggcactttgagcacatgttcatggtagccgcactgcc 222 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 658 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 599 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 351 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 598 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 539 Query: 352 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 392 || || || ||||||||||||||||| || || |||||||| Sbjct: 538 ttgccacatcggcagttgaatccggtaagaccaaccctctt 498 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 888 agacgatcataaataaagcttacacaacatagccaaca 851
>dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A12, full insert sequence Length = 1009 Score = 117 bits (59), Expect = 5e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 553 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 612 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 331 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 272 Query: 613 gccatcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 271 atcatc-tccttgtggcactttgagcacatgttcatggtagccgcactgcc 222 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 658 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 599 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 351 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 598 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 539 Query: 352 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 392 || || || ||||||||||||||||| || || |||||||| Sbjct: 538 ttgccacatcggcagttgaatccggtaagaccaaccctctt 498 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 888 agacgatcataaataaagcttacacaacatagccaaca 851
>dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C11, full insert sequence Length = 1000 Score = 117 bits (59), Expect = 5e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 553 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 612 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 332 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 273 Query: 613 gccatcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 272 atcatc-tccttgtggcactttgagcacatgttcatggtagccgcactgcc 223 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 659 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 600 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 351 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 599 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 540 Query: 352 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 392 || || || ||||||||||||||||| || || |||||||| Sbjct: 539 ttgccacatcggcagttgaatccggtaagaccaaccctctt 499 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 889 agacgatcataaataaagcttacacaacatagccaaca 852
>dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026K20, full insert sequence Length = 1209 Score = 117 bits (59), Expect = 5e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 553 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 612 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 329 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 270 Query: 613 gccatcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 269 atcatc-tccttgtggcactttgagcacatgttcatggtagccgcactgcc 220 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 656 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 597 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 351 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 596 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 537 Query: 352 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 392 || || || ||||||||||||||||| || || |||||||| Sbjct: 536 ttgccacatcggcagttgaatccggtaagaccaaccctctt 496 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 886 agacgatcataaataaagcttacacaacatagccaaca 849
>dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C08, full insert sequence Length = 1021 Score = 117 bits (59), Expect = 5e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 553 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 612 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 328 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 269 Query: 613 gccatcttccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 268 atcatc-tccttgtggcactttgagcacatgttcatggtagccgcactgcc 219 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 655 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 596 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 351 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 595 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 536 Query: 352 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 392 || || || ||||||||||||||||| || || |||||||| Sbjct: 535 ttgccacatcggcagttgaatccggtaagaccaaccctctt 495 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 885 agacgatcataaataaagcttacacaacatagccaaca 848
>gb|AY105867.1| Zea mays PCO143262 mRNA sequence Length = 984 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Minus Query: 227 agatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatgg 286 |||||||||| |||||||||||||||||||| || |||||||||||||| |||||| | | Sbjct: 602 agatcttgtcaagcttctccgccttcaccactggattggccttggcgatagcgtccctag 543 Query: 287 ccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagt 346 | |||| || |||||||||| ||| ||||| ||||| |||||||||||| ||| |||| Sbjct: 542 ctgcagttcgatagtcgaactggcagtcgtgtttgtcggagtagcggtgcatcgaacagt 483 Query: 347 agaggttcccgcaccggcagtt 368 | ||||||||| |||||||| Sbjct: 482 acgtgttcccgcatcggcagtt 461 Score = 87.7 bits (44), Expect = 4e-14 Identities = 75/84 (89%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 577 gaggaggcggccagcttggcctgctcctgcttcatcgccatcttccttgtggcacttgga 636 |||||||| |||| || |||||||||||||||||| ||||| |||||||||||||||| Sbjct: 246 gaggaggcagccaactgggcctgctcctgcttcattatcatct-ccttgtggcacttgga 188 Query: 637 gcacatgttcatggtcgccgcgct 660 ||||||||||||||| || ||||| Sbjct: 187 gcacatgttcatggtggcagcgct 164
>gb|BT019326.1| Zea mays clone Contig1045.F mRNA sequence Length = 779 Score = 91.7 bits (46), Expect = 3e-15 Identities = 142/174 (81%) Strand = Plus / Minus Query: 227 agatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatgg 286 ||||||||||||||||||||||| ||||||| || ||||||||||| || |||||| | | Sbjct: 291 agatcttgtcgagcttctccgccctcaccacaggattggccttggcaatcgcgtcccttg 232 Query: 287 ccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagt 346 | |||| || |||||||||| || || || ||||| |||||||||||| || |||| Sbjct: 231 ctgcagtccgatagtcgaactgacagtcatgtttgtcggagtagcggtgcaccgaacagt 172 Query: 347 agaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcagg 400 | | ||||||||| |||||| | ||||| || ||||| || | ||| ||||||| Sbjct: 171 acatgttcccgcatcggcagctaaatcccgtcagcccaacacgcttcctgcagg 118
>gb|AY105966.1| Zea mays PCO143261 mRNA sequence Length = 1035 Score = 91.7 bits (46), Expect = 3e-15 Identities = 142/174 (81%) Strand = Plus / Minus Query: 227 agatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatgg 286 ||||||||||||||||||||||| ||||||| || ||||||||||| || |||||| | | Sbjct: 603 agatcttgtcgagcttctccgccctcaccacaggattggccttggcaatcgcgtcccttg 544 Query: 287 ccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagt 346 | |||| || |||||||||| || || || ||||| |||||||||||| || |||| Sbjct: 543 ctgcagtccgatagtcgaactgacagtcatgtttgtcggagtagcggtgcaccgaacagt 484 Query: 347 agaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcagg 400 | | ||||||||| |||||| | ||||| || ||||| || | ||| ||||||| Sbjct: 483 acatgttcccgcatcggcagctaaatcccgtcagcccaacacgcttcctgcagg 430 Score = 85.7 bits (43), Expect = 2e-13 Identities = 77/87 (88%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 577 gaggaggcggccagcttggcctgctcctgcttcatcgccatcttccttgtggcacttgga 636 |||||||| ||||||| |||||||||||||||| | ||||| |||||||||||||||| Sbjct: 247 gaggaggcagccagctgggcctgctcctgcttcgttatcatct-ccttgtggcacttgga 189 Query: 637 gcacatgttcatggtcgccgcgctgcc 663 |||||||||||| ||||| || ||||| Sbjct: 188 gcacatgttcatcgtcgcagcactgcc 162
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 620 tccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 663 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 tccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 66
>dbj|AK062342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-F03, full insert sequence Length = 631 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 297 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 238 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 351 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 237 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 178 Query: 352 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 392 || || || ||||||||||||||||| || || |||||||| Sbjct: 177 ttgccacatcggcagttgaatccggtaagaccaaccctctt 137 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 527 agacgatcataaataaagcttacacaacatagccaaca 490
>gb|DQ083231.1| Oryza sativa (indica cultivar-group) clone 5B6A82 mRNA sequence Length = 391 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 345 agacgatcataaataaagcttacacaacatagccaaca 308 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 115 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 56 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagt 346 | || ||||| |||| ||| || ||||| || || ||||||||||| ||||||| Sbjct: 55 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcgttgcgcagt 1
>gb|DQ083227.1| Oryza sativa (indica cultivar-group) clone 2B5A77 mRNA sequence Length = 391 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 16 agacgaccataaataaagcttacacaacatagccaaca 53 |||||| ||||||||||||||||||||||||||||||| Sbjct: 345 agacgatcataaataaagcttacacaacatagccaaca 308 Score = 50.1 bits (25), Expect = 0.009 Identities = 91/113 (80%) Strand = Plus / Minus Query: 232 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 291 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 115 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 56 Query: 292 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgca 344 | || ||||| |||| ||| || ||||| || || ||||||||||| ||||| Sbjct: 55 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcgttgcgca 3
>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144, complete sequence Length = 135217 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 227 agatcttgtcgagcttctccgccttcaccaccgggttggccttggcgat 275 ||||||||| |||||||| |||||||||||||||| ||||| ||||| Sbjct: 38652 agatcttgttcagcttctcacccttcaccaccgggttcgccttcgcgat 38700
>gb|AY137590.1| Oryza sativa (indica cultivar-group) multiple stress-associated zinc-finger protein (OSISAP1) gene, complete cds Length = 3139 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 caccaccgggttggccttggcgatggcgtcc 282 ||||||||||||| || |||||||||||||| Sbjct: 2930 caccaccgggttgtccctggcgatggcgtcc 2900
>gb|AF140722.2| Oryza sativa (indica cultivar-group) multiple stress-responsive zinc-finger protein mRNA, complete cds Length = 844 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 caccaccgggttggccttggcgatggcgtcc 282 ||||||||||||| || |||||||||||||| Sbjct: 577 caccaccgggttgtccctggcgatggcgtcc 547
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 caccaccgggttggccttggcgatggcgtcc 282 ||||||||||||| || |||||||||||||| Sbjct: 18592224 caccaccgggttgtccctggcgatggcgtcc 18592194 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 628 gcacttggagcacatgttcatggtc 652 ||||||||||||||||||| ||||| Sbjct: 16958194 gcacttggagcacatgttcttggtc 16958170 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 628 gcacttggagcacatgttcatggtcgccgcgctgcc 663 |||||||||||| | |||| |||||||| ||||||| Sbjct: 16958011 gcacttggagcagaggttcttggtcgcctcgctgcc 16957976
>dbj|AK119793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B06, full insert sequence Length = 708 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 caccaccgggttggccttggcgatggcgtcc 282 ||||||||||||| || |||||||||||||| Sbjct: 594 caccaccgggttgtccctggcgatggcgtcc 564
>dbj|AK106128.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F08, full insert sequence Length = 914 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 caccaccgggttggccttggcgatggcgtcc 282 ||||||||||||| || |||||||||||||| Sbjct: 590 caccaccgggttgtccctggcgatggcgtcc 560
>dbj|AK070140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G11, full insert sequence Length = 860 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 caccaccgggttggccttggcgatggcgtcc 282 ||||||||||||| || |||||||||||||| Sbjct: 595 caccaccgggttgtccctggcgatggcgtcc 565
>dbj|AK061067.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-B12, full insert sequence Length = 870 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 caccaccgggttggccttggcgatggcgtcc 282 ||||||||||||| || |||||||||||||| Sbjct: 594 caccaccgggttgtccctggcgatggcgtcc 564
>ref|NM_115140.2| Arabidopsis thaliana DNA binding / zinc ion binding AT3G52800 mRNA, complete cds Length = 1129 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 355 ccgcaccggcagttgaatccggtgagcccgaccc 388 ||||||||||| ||||||||||| | |||||||| Sbjct: 635 ccgcaccggcacttgaatccggttaacccgaccc 602
>ref|XM_416311.1| PREDICTED: Gallus gallus similar to DIP13 beta; adaptor protein containing PH domain, PTB domain and leucine zipper motif 2 (LOC418075), mRNA Length = 3201 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 514 gctgtgctgccagcagcaaggtgctc 539 ||||||||||||||||||||| |||| Sbjct: 2293 gctgtgctgccagcagcaaggggctc 2268
>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence Length = 216041 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 caacatagccaacaaggagacc 61 |||||||||||||||||||||| Sbjct: 81329 caacatagccaacaaggagacc 81350
>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22 Length = 100028 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 355 ccgcaccggcagttgaatccggtgagcccgaccc 388 ||||||||||| ||||||||||| | |||||||| Sbjct: 90668 ccgcaccggcacttgaatccggttaacccgaccc 90635
>gb|AY072524.1| Arabidopsis thaliana zinc finger-like protein (At3g52800; F3C22_200) mRNA, complete cds Length = 541 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 355 ccgcaccggcagttgaatccggtgagcccgaccc 388 ||||||||||| ||||||||||| | |||||||| Sbjct: 380 ccgcaccggcacttgaatccggttaacccgaccc 347
>gb|AY042871.1| Arabidopsis thaliana zinc finger-like protein (F3C22_200) mRNA, complete cds Length = 871 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 355 ccgcaccggcagttgaatccggtgagcccgaccc 388 ||||||||||| ||||||||||| | |||||||| Sbjct: 472 ccgcaccggcacttgaatccggttaacccgaccc 439
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 tctccgccttcaccaccgggtt 263 |||||||||||||||||||||| Sbjct: 28232417 tctccgccttcaccaccgggtt 28232438
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 tctccgccttcaccaccgggtt 263 |||||||||||||||||||||| Sbjct: 87962 tctccgccttcaccaccgggtt 87983
>gb|AC093467.10| Mus musculus chromosome 12, clone RP23-9A4, complete sequence Length = 236969 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 509 ccaccgctgtgctgccagcagc 530 |||||||||||||||||||||| Sbjct: 198827 ccaccgctgtgctgccagcagc 198806
>gb|AC124471.4| Mus musculus BAC clone RP24-79D7 from 12, complete sequence Length = 179503 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 509 ccaccgctgtgctgccagcagc 530 |||||||||||||||||||||| Sbjct: 8443 ccaccgctgtgctgccagcagc 8422
>gb|AC145942.4| Gallus gallus BAC clone CH261-21I23 from chromosome unknown, complete sequence Length = 228603 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 514 gctgtgctgccagcagcaaggtgctc 539 ||||||||||||||||||||| |||| Sbjct: 79147 gctgtgctgccagcagcaaggggctc 79122
>dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45A23, TM0318, complete sequence Length = 117676 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 620 tccttgtggcacttggagcacatgttcatggtcgccgc 657 ||||||| |||||||| |||||||||||||| ||||| Sbjct: 54566 tccttgtaacacttggaacacatgttcatggtagccgc 54603
>gb|BT014337.1| Lycopersicon esculentum clone 133610F, mRNA sequence Length = 1026 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 620 tccttgtggcacttggagcacatgttcat 648 ||||||| |||||| |||||||||||||| Sbjct: 142 tccttgtagcactttgagcacatgttcat 114
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 ggccttggcgatggcgtccatggcc 288 ||||||||||||||| ||||||||| Sbjct: 801463 ggccttggcgatggcctccatggcc 801439
>emb|AL133331.27| Human DNA sequence from clone RP11-157E14 on chromosome 20 Contains the 3' end of a novel gene, the 5' end of a novel gene, a novel gene and the 5' end of the SPTLC2L gene for serine palmitoyltransferase long chain base subunit 2-like (aminotransferase 2), complete sequence Length = 85110 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 accataaataaagcttacaca 41 ||||||||||||||||||||| Sbjct: 77469 accataaataaagcttacaca 77449
>emb|BX908807.1| Neurospora crassa DNA linkage group III BAC contig B13B7 Length = 93134 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 ctctccatggccgcctcgctg 447 ||||||||||||||||||||| Sbjct: 87774 ctctccatggccgcctcgctg 87794
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gttggccttggcgatggcgtc 281 ||||||||||||||||||||| Sbjct: 69356 gttggccttggcgatggcgtc 69376
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gttggccttggcgatggcgtc 281 ||||||||||||||||||||| Sbjct: 334180 gttggccttggcgatggcgtc 334200
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gttggccttggcgatggcgtc 281 ||||||||||||||||||||| Sbjct: 15255 gttggccttggcgatggcgtc 15235
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 628 gcacttggagcacatgttcatggtc 652 ||||||||||||||||||| ||||| Sbjct: 88007 gcacttggagcacatgttcttggtc 87983 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 628 gcacttggagcacatgttcatggtcgccgcgctgcc 663 |||||||||||| | |||| |||||||| ||||||| Sbjct: 87824 gcacttggagcagaggttcttggtcgcctcgctgcc 87789
>emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in linkage group 11, complete sequence Length = 128109 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 ataatgcagcaaagacgcacg 171 ||||||||||||||||||||| Sbjct: 58808 ataatgcagcaaagacgcacg 58828
>gb|AY106416.1| Zea mays PCO123428 mRNA sequence Length = 744 Score = 42.1 bits (21), Expect = 2.3 Identities = 66/81 (81%) Strand = Plus / Minus Query: 321 gtccgagtagcggtgcgtcgcgcagtagaggttcccgcaccggcagttgaatccggtgag 380 ||||||||||||||||| ||||| |||||| ||||| |||||| ||| || ||||| Sbjct: 113 gtccgagtagcggtgcgcgccgcagaagaggtctccgcagcggcagcggaagcccgtgag 54 Query: 381 cccgaccctctttctgcaggt 401 ||| |||| ||| | |||||| Sbjct: 53 ccccacccgcttgcggcaggt 33
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 gcttctccgccttcaccaccg 259 ||||||||||||||||||||| Sbjct: 199156 gcttctccgccttcaccaccg 199136
>ref|XM_527724.1| PREDICTED: Pan troglodytes similar to T-cell receptor gamma chain V region V108A precursor (LOC472349), mRNA Length = 1371 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gatggcgtccatggccgcag 292 |||||||||||||||||||| Sbjct: 466 gatggcgtccatggccgcag 447
>gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, complete sequence Length = 158864 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctggggctgccgccgaggc 88 |||||||||||||||||||| Sbjct: 41181 cctggggctgccgccgaggc 41200
>gb|AC022342.3| Drosophila melanogaster clone BACR33N21, complete sequence Length = 179839 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 596 cctgctcctgcttcatcgccatct 619 |||||||||||| ||||||||||| Sbjct: 10812 cctgctcctgctccatcgccatct 10789
>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete sequence Length = 206418 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctggggctgccgccgaggc 88 |||||||||||||||||||| Sbjct: 88254 cctggggctgccgccgaggc 88273
>ref|NG_001336.2| Homo sapiens T cell receptor gamma locus (TRG@) on chromosome 7 Length = 140728 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gatggcgtccatggccgcag 292 |||||||||||||||||||| Sbjct: 62422 gatggcgtccatggccgcag 62403
>gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section 94 of 121 of the complete plasmid sequence Length = 10943 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ggctgccgccgaggcgcgtg 93 |||||||||||||||||||| Sbjct: 9575 ggctgccgccgaggcgcgtg 9594
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 cgggttggccttggcgatgg 277 |||||||||||||||||||| Sbjct: 3710423 cgggttggccttggcgatgg 3710404
>gb|AC006033.2| Homo sapiens BAC clone RP11-121A8 from 7, complete sequence Length = 171816 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gatggcgtccatggccgcag 292 |||||||||||||||||||| Sbjct: 132425 gatggcgtccatggccgcag 132444
>emb|CR853300.3| Wallaby DNA sequence from clone MEKBa-585D22, complete sequence Length = 165531 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctctttctgcaggtgctgca 407 |||||||||||||||||||| Sbjct: 163144 ctctttctgcaggtgctgca 163125
>gb|AC005535.2| Homo sapiens PAC clone RP5-1168M19 from 7, complete sequence Length = 157813 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctggggctgccgccgaggc 88 |||||||||||||||||||| Sbjct: 149823 cctggggctgccgccgaggc 149842
>ref|XM_502694.1| Yarrowia lipolytica CLIB122, YALI0D11330g predicted mRNA Length = 876 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ttggccttggcgatggcgtc 281 |||||||||||||||||||| Sbjct: 617 ttggccttggcgatggcgtc 598
>emb|AL158055.12| Human DNA sequence from clone RP11-348F1 on chromosome Xp11.1-11.22 Contains the NUDT11 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 11, two novel genes, the NUDT10 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 10 and three CpG islands, complete sequence Length = 184873 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 acctggggctgccgccgaggcgcg 91 ||||| |||||||||||||||||| Sbjct: 103047 acctgtggctgccgccgaggcgcg 103024
>gb|AE005753.1| Caulobacter crescentus CB15 section 79 of 359 of the complete genome Length = 10329 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 ggcggccagcttggcctgct 601 |||||||||||||||||||| Sbjct: 2776 ggcggccagcttggcctgct 2795
>dbj|AK165988.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730027B12 product:Similar to serine/threonine kinase 35 (Fragment) homolog [Mus musculus], full insert sequence Length = 5324 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gcttctccgccttcaccacc 258 |||||||||||||||||||| Sbjct: 4040 gcttctccgccttcaccacc 4021
>gb|AF159056.1|AF159056 Homo sapiens T-cell gamma receptor locus, complete sequence Length = 140691 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gatggcgtccatggccgcag 292 |||||||||||||||||||| Sbjct: 62417 gatggcgtccatggccgcag 62398
>dbj|AK085193.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length enriched library, clone:D530005H18 product:unclassifiable, full insert sequence Length = 3788 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gcttctccgccttcaccacc 258 |||||||||||||||||||| Sbjct: 2507 gcttctccgccttcaccacc 2488
>dbj|AK053817.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130309P10 product:unclassifiable, full insert sequence Length = 3812 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgccaccgctgtgctgcca 525 |||||||||||||||||||| Sbjct: 3081 ctgccaccgctgtgctgcca 3100
>gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 222712 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgccaccgctgtgctgcca 525 |||||||||||||||||||| Sbjct: 182225 ctgccaccgctgtgctgcca 182206
>gb|AF222338.1|AF222338 Rattus norvegicus voltage gated N-type calcium channel alpha1B gene, partial cds, alternatively spliced Length = 6340 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 gaagccagcatgatgaaaggataa 154 ||||||||||||| |||||||||| Sbjct: 2259 gaagccagcatgaggaaaggataa 2282
>emb|AL671536.8| Mouse DNA sequence from clone RP23-291O10 on chromosome X, complete sequence Length = 221255 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gcttgggcctttggggctct 430 |||||||||||||||||||| Sbjct: 134103 gcttgggcctttggggctct 134084
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ccttggcgatggcgtccatg 285 |||||||||||||||||||| Sbjct: 4628196 ccttggcgatggcgtccatg 4628177
>gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-60d3, complete sequence Length = 100208 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 620 tccttgtggcacttggagcacatgttcatggt 651 ||||||| |||||||| |||||||||||||| Sbjct: 14168 tccttgtaacacttggaacacatgttcatggt 14137
>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210862 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgccaccgctgtgctgcca 525 |||||||||||||||||||| Sbjct: 8419 ctgccaccgctgtgctgcca 8400
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ttggccttggcgatggcgtc 281 |||||||||||||||||||| Sbjct: 1186632 ttggccttggcgatggcgtc 1186651
>gb|AE003495.4| Drosophila melanogaster chromosome X, section 47 of 74 of the complete sequence Length = 314743 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 596 cctgctcctgcttcatcgccatct 619 |||||||||||| ||||||||||| Sbjct: 157189 cctgctcctgctccatcgccatct 157166
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ggttggccttggcgatggcg 279 |||||||||||||||||||| Sbjct: 4682855 ggttggccttggcgatggcg 4682836
>ref|NM_001038635.1| Mus musculus serine/threonine kinase 35 (Stk35), transcript variant 2, mRNA Length = 5401 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gcttctccgccttcaccacc 258 |||||||||||||||||||| Sbjct: 4101 gcttctccgccttcaccacc 4082
>ref|NM_183262.2| Mus musculus serine/threonine kinase 35 (Stk35), transcript variant 1, mRNA Length = 6151 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gcttctccgccttcaccacc 258 |||||||||||||||||||| Sbjct: 4851 gcttctccgccttcaccacc 4832
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ttggccttggcgatggcgtc 281 |||||||||||||||||||| Sbjct: 1420942 ttggccttggcgatggcgtc 1420923
>emb|AL808137.4| Mouse DNA sequence from clone RP23-358G23 on chromosome 2, complete sequence Length = 199593 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gcttctccgccttcaccacc 258 |||||||||||||||||||| Sbjct: 185953 gcttctccgccttcaccacc 185934
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 gctgccagcagcaaggtgct 538 |||||||||||||||||||| Sbjct: 2924388 gctgccagcagcaaggtgct 2924369 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,726,702 Number of Sequences: 3902068 Number of extensions: 4726702 Number of successful extensions: 97223 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 96258 Number of HSP's gapped (non-prelim): 930 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
