Clone Information

BLAST Search Result

Clone Name	rbaal3g04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Y1388_SYNY3 (P74148) Hypothetical protein sll1388	54	4e-07
2	Y1101_SYNY3 (P72745) Hypothetical protein slr1101	53	6e-07
3	Y531_METJA (Q57951) Hypothetical protein MJ0531	49	8e-06
4	YXIE_BACSU (P42297) Hypothetical protein yxiE precursor	48	2e-05
5	YQA3_THEAQ (P74897) Hypothetical 14.6 kDa protein in QAH/OAS sul...	46	9e-05
6	USPE_SHIFL (P0AAC3) Universal stress protein E	44	5e-04
7	USPE_ECOLI (P0AAC0) Universal stress protein E	44	5e-04
8	USPE_ECOL6 (P0AAC1) Universal stress protein E	44	5e-04
9	USPE_ECO57 (P0AAC2) Universal stress protein E	44	5e-04
10	USPE_SALTY (Q8ZP84) Universal stress protein E	42	0.001
11	USPE_SALTI (Q8Z788) Universal stress protein E	42	0.001
12	NHAX_BACSU (O07552) Stress response protein nhaX	42	0.002
13	YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I	42	0.002
14	Y577_METJA (Q57997) Protein MJ0577	40	0.004
15	USPE_PHOLL (P60005) Universal stress protein E	40	0.005
16	USPE_YERPE (Q8ZE81) Universal stress protein E	38	0.025
17	USPF_SALTY (P67091) Universal stress protein F	35	0.16
18	USPF_SALTI (P67092) Universal stress protein F	35	0.16
19	Y2019_MYCBO (P0A5F8) Hypothetical protein Mb2019	35	0.16
20	Y1996_MYCTU (P0A5F7) Hypothetical protein Rv1996/MT2052	35	0.16
21	Y1654_SYNY3 (P72817) Hypothetical protein sll1654	34	0.28
22	Y1916_COXBU (P45680) Hypothetical protein CBU1916	33	0.81
23	Y1154_METTH (O27222) Hypothetical protein MTH1154	31	2.4
24	MDH_NOCFA (Q5YTI1) Malate dehydrogenase (EC 1.1.1.37)	31	2.4
25	USPF_SHIFL (P0A4P8) Universal stress protein F	31	3.1
26	USPF_ECOLI (P37903) Universal stress protein F	31	3.1
27	USPF_ECOL6 (P0A4P6) Universal stress protein F	31	3.1
28	USPF_ECO57 (P0A4P7) Universal stress protein F	31	3.1
29	Y2028_MYCBO (P64922) Hypothetical protein Mb2028c	30	5.3
30	Y2005_MYCTU (P64921) Hypothetical protein Rv2005c/MT2061	30	5.3
31	Y031_HELPY (P64649) Hypothetical protein HP0031	30	5.3
32	Y027_HELPJ (P64650) Hypothetical protein jhp_0027	30	5.3
33	MAO1_SALTY (Q8ZPE8) NAD-dependent malic enzyme (EC 1.1.1.38) (NA...	30	5.3
34	MAO1_SALTI (Q8Z728) NAD-dependent malic enzyme (EC 1.1.1.38) (NA...	30	5.3
35	MAO1_SALPA (Q5PHY7) NAD-dependent malic enzyme (EC 1.1.1.38) (NA...	30	5.3
36	MAO1_SALCH (Q57P88) NAD-dependent malic enzyme (EC 1.1.1.38) (NA...	30	5.3
37	HBA_AILME (P18970) Hemoglobin alpha subunit (Hemoglobin alpha ch...	30	5.3
38	AGC1_ASHGO (Q75AH6) Mitochondrial aspartate-glutamate transporte...	30	5.3
39	ZP1_RAT (O54766) Zona pellucida sperm-binding protein 1 precurso...	30	6.9
40	YIDR_ECOLI (P31455) Hypothetical protein yidR	29	9.0

>Y1388_SYNY3 (P74148) Hypothetical protein sll1388|
          Length = 154

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 27/74 (36%), Positives = 39/74 (52%)
 Frame = -2

Query: 493 LEYFVNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSE 314
           L+  V +    G+ CE   K G+P   I    K    DL+V+G RGL     VFLG+VS 
Sbjct: 80  LQSIVQQVQEDGVACEWDVKVGEPGRWIRDMAKNWDADLVVLGRRGLKGLAEVFLGSVSS 139

Query: 313 YCVKHAECPVITIK 272
           Y + H +C V+ ++
Sbjct: 140 YVIHHVQCSVLIVQ 153

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>Y1101_SYNY3 (P72745) Hypothetical protein slr1101|
          Length = 108

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 28/88 (31%), Positives = 42/88 (47%)
 Frame = -2

Query: 538 FQSMKQRDKIRGIHLLEYFVNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSR 359
           +Q   Q  +  G+  LE    +   L I+C+A    G P ++IC   K+   D++VVG R
Sbjct: 17  WQQQWQTFEQEGLDTLEKRRQQALALDIECQAEQILGSPGKIICQRAKQDNSDIIVVGHR 76

Query: 358 GLGPFQRVFLGAVSEYCVKHAECPVITI 275
           G      + LG+V  Y   HA C V  +
Sbjct: 77  GRWGLSEILLGSVGNYVFHHAHCCVFVV 104

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>Y531_METJA (Q57951) Hypothetical protein MJ0531|
          Length = 170

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 22/68 (32%), Positives = 39/68 (57%)
 Frame = -2

Query: 460 GIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVI 281
           G+K      +G P   I    ++ + DL+V+G+ G    +R+ LG+V+E  +K+A CPV+
Sbjct: 103 GVKIHTEMLEGVPANEIVEFAEKKKADLIVMGTTGKTGLERILLGSVAERVIKNAHCPVL 162

Query: 280 TIKRKANE 257
            +K+   E
Sbjct: 163 VVKKPKKE 170

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>YXIE_BACSU (P42297) Hypothetical protein yxiE precursor|
          Length = 148

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 25/96 (26%), Positives = 45/96 (46%)
 Frame = -2

Query: 559 IYASPTDFQSMKQRDKIRGIHLLEYFVNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPD 380
           +Y        ++   K  G+ +LE    +    G++ E     G+P   I +  K     
Sbjct: 53  VYVPEHFIDEIRNEVKKEGLKILENAKEKAAEKGVQAETIYANGEPAHEILNHAKEKGVS 112

Query: 379 LLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIK 272
           L+VVGSRG+   + + LG+VS    + + CPV+ ++
Sbjct: 113 LIVVGSRGISGLKEMMLGSVSHKVSQLSTCPVLIVR 148

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>YQA3_THEAQ (P74897) Hypothetical 14.6 kDa protein in QAH/OAS sulfhydrylase|
           3'region
          Length = 137

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 23/59 (38%), Positives = 34/59 (57%)
 Frame = -2

Query: 448 EAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIK 272
           +A   QG P E I       + DL+V+G+RGLG    +FLG+ S+  V  A CPV+ ++
Sbjct: 79  DALLLQGRPAEAILQAAIGEKADLIVMGTRGLGAVGSLFLGSQSQKVVAEAPCPVLLVR 137

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>USPE_SHIFL (P0AAC3) Universal stress protein E|
          Length = 315

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
 Frame = -2

Query: 541 DFQSMKQRDKIRGIHLLEYFVNECHRLGIKCE-AWTKQGDPKEVICHEVKRVQPDLLVVG 365
           +F      D IRG HLL        + GI       ++G P+EVI    + +Q  ++V+G
Sbjct: 210 EFDPSVYNDAIRGQHLLAMKALR-QKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLG 268

Query: 364 SRGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETPQDPIDD 233
           + G       FLG  +E  + H  C ++ IK    +TP + +DD
Sbjct: 269 TVGRTGISAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVE-LDD 311

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>USPE_ECOLI (P0AAC0) Universal stress protein E|
          Length = 315

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
 Frame = -2

Query: 541 DFQSMKQRDKIRGIHLLEYFVNECHRLGIKCE-AWTKQGDPKEVICHEVKRVQPDLLVVG 365
           +F      D IRG HLL        + GI       ++G P+EVI    + +Q  ++V+G
Sbjct: 210 EFDPSVYNDAIRGQHLLAMKALR-QKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLG 268

Query: 364 SRGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETPQDPIDD 233
           + G       FLG  +E  + H  C ++ IK    +TP + +DD
Sbjct: 269 TVGRTGISAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVE-LDD 311

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>USPE_ECOL6 (P0AAC1) Universal stress protein E|
          Length = 315

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
 Frame = -2

Query: 541 DFQSMKQRDKIRGIHLLEYFVNECHRLGIKCE-AWTKQGDPKEVICHEVKRVQPDLLVVG 365
           +F      D IRG HLL        + GI       ++G P+EVI    + +Q  ++V+G
Sbjct: 210 EFDPSVYNDAIRGQHLLAMKALR-QKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLG 268

Query: 364 SRGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETPQDPIDD 233
           + G       FLG  +E  + H  C ++ IK    +TP + +DD
Sbjct: 269 TVGRTGISAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVE-LDD 311

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>USPE_ECO57 (P0AAC2) Universal stress protein E|
          Length = 315

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
 Frame = -2

Query: 541 DFQSMKQRDKIRGIHLLEYFVNECHRLGIKCE-AWTKQGDPKEVICHEVKRVQPDLLVVG 365
           +F      D IRG HLL        + GI       ++G P+EVI    + +Q  ++V+G
Sbjct: 210 EFDPSVYNDAIRGQHLLAMKALR-QKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLG 268

Query: 364 SRGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETPQDPIDD 233
           + G       FLG  +E  + H  C ++ IK    +TP + +DD
Sbjct: 269 TVGRTGISAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVE-LDD 311

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>USPE_SALTY (Q8ZP84) Universal stress protein E|
          Length = 314

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 29/103 (28%), Positives = 47/103 (45%)
 Frame = -2

Query: 541 DFQSMKQRDKIRGIHLLEYFVNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGS 362
           +F      D IRG HLL            +     ++G P+EVI    + +Q  ++V+G+
Sbjct: 210 EFDPSVYNDAIRGQHLLAMKALRQKFSIDEKVTHVEKGLPEEVIPDLAEHLQAGIVVLGT 269

Query: 361 RGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETPQDPIDD 233
            G       FLG  +E  + H  C ++ IK    +TP + +DD
Sbjct: 270 VGRTGLSAAFLGNTAEQVIDHLRCDLLVIKPDEYQTPVE-LDD 311

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>USPE_SALTI (Q8Z788) Universal stress protein E|
          Length = 314

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 29/103 (28%), Positives = 47/103 (45%)
 Frame = -2

Query: 541 DFQSMKQRDKIRGIHLLEYFVNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGS 362
           +F      D IRG HLL            +     ++G P+EVI    + +Q  ++V+G+
Sbjct: 210 EFDPSVYNDAIRGQHLLAMKALRQKFSIDEKVTHVEKGLPEEVIPDLAEHLQAGIVVLGT 269

Query: 361 RGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETPQDPIDD 233
            G       FLG  +E  + H  C ++ IK    +TP + +DD
Sbjct: 270 VGRTGLSAAFLGNTAEQVIDHLRCDLLVIKPDEYQTPVE-LDD 311

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>NHAX_BACSU (O07552) Stress response protein nhaX|
          Length = 166

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = -2

Query: 433 QGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIK 272
           +GDP E I     R+  D++V GSR     +++  G+VSE     ++ PV+ +K
Sbjct: 113 EGDPAESIIEHANRISADMIVTGSRDQNRLKKLIFGSVSEKLSAKSDIPVLIVK 166

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>YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I|
          Length = 601

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = -2

Query: 421 KEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETPQ 248
           K +I   +  ++P L+V+GSRG    + V LG+ S Y V  +  PV+  ++K  +  Q
Sbjct: 520 KHLIIEMIDYIEPSLVVMGSRGRSHLKGVLLGSFSNYLVNKSSVPVMVARKKLKKNKQ 577

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>Y577_METJA (Q57997) Protein MJ0577|
          Length = 162

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = -2

Query: 493 LEYFVNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSE 314
           +E    E   +G K +     G P E I    +    D++++GS G    + + LG+V+E
Sbjct: 85  MENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTE 144

Query: 313 YCVKHAECPVITIKRK 266
             +K +  PV+ +KRK
Sbjct: 145 NVIKKSNKPVLVVKRK 160

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>USPE_PHOLL (P60005) Universal stress protein E|
          Length = 314

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
 Frame = -2

Query: 541 DFQSMKQRDKIRGIHLLEYFVNECHRLGIKCEAWTK--QGDPKEVICHEVKRVQPDLLVV 368
           DF        +RG HL+   + E  +     E +T   +G P+ VI      +   ++V+
Sbjct: 212 DFNPSVYNHALRGQHLIA--MKELRQTFCIDEKYTHIHEGLPESVIPQMCDEMNAGIIVL 269

Query: 367 GSRGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETP 251
           G  G       FLG  +E+ + H +C ++TIK    E P
Sbjct: 270 GILGRTGLSAAFLGNTAEHVIDHLKCDILTIKPDGFECP 308

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>USPE_YERPE (Q8ZE81) Universal stress protein E|
          Length = 318

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
 Frame = -2

Query: 541 DFQSMKQRDKIRGIHLLEYFVNECHRLGIKCEAWT--KQGDPKEVICHEVKRVQPDLLVV 368
           DF      D IRG HL+        + GI  E +T  ++G P+EVI    + +   ++V+
Sbjct: 211 DFDPSVYNDAIRGQHLVAMKALR-QQFGID-EKFTHVEKGLPEEVIPDLAEHLNAGVVVL 268

Query: 367 GSRGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETPQDPIDD 233
           G+ G       F+G  +E+ + + +C ++ IK +    P +  +D
Sbjct: 269 GTLGRTGLSAAFIGNTTEHVIDNLKCDLLAIKPEGFTCPIEGNED 313

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>USPF_SALTY (P67091) Universal stress protein F|
          Length = 144

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 18/74 (24%), Positives = 37/74 (50%)
 Frame = -2

Query: 493 LEYFVNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSE 314
           LE  + + +    + +A   +G PK+ I    K++  D++++ S          LG+ + 
Sbjct: 72  LEAIIKKFNLPADRVQAHVAEGSPKDKILEMAKKLPADMVIIASHR-PDITTYLLGSNAA 130

Query: 313 YCVKHAECPVITIK 272
             V+HAEC V+ ++
Sbjct: 131 AVVRHAECSVLVVR 144

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>USPF_SALTI (P67092) Universal stress protein F|
          Length = 144

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 18/74 (24%), Positives = 37/74 (50%)
 Frame = -2

Query: 493 LEYFVNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSE 314
           LE  + + +    + +A   +G PK+ I    K++  D++++ S          LG+ + 
Sbjct: 72  LEAIIKKFNLPADRVQAHVAEGSPKDKILEMAKKLPADMVIIASHR-PDITTYLLGSNAA 130

Query: 313 YCVKHAECPVITIK 272
             V+HAEC V+ ++
Sbjct: 131 AVVRHAECSVLVVR 144

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>Y2019_MYCBO (P0A5F8) Hypothetical protein Mb2019|
          Length = 317

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = -2

Query: 379 LLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETPQDP 242
           L+VVGS G G F  + LG+VS   V   + PVI  +      PQDP
Sbjct: 273 LVVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVAR-----IPQDP 313

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>Y1996_MYCTU (P0A5F7) Hypothetical protein Rv1996/MT2052|
          Length = 317

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = -2

Query: 379 LLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIKRKANETPQDP 242
           L+VVGS G G F  + LG+VS   V   + PVI  +      PQDP
Sbjct: 273 LVVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVAR-----IPQDP 313

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>Y1654_SYNY3 (P72817) Hypothetical protein sll1654|
          Length = 157

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = -2

Query: 460 GIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVI 281
           GI  +   ++G     IC     V  DL+V+G RGLG        +V+   +  + CPV+
Sbjct: 95  GIATKTIEREGMASFTICDVADEVNADLIVMGCRGLGLTTEGVAESVTARVINLSPCPVL 154

Query: 280 TI 275
            +
Sbjct: 155 VV 156

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>Y1916_COXBU (P45680) Hypothetical protein CBU1916|
          Length = 146

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = -2

Query: 436 KQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIKRKAN 260
           K G  K +I  + K    DL++VGS G    Q + LG+ S   +  A+C V+ ++ K +
Sbjct: 89  KVGPAKFLILEQAKNWGVDLIIVGSHGRHGIQ-LLLGSTSNAVLHGAKCDVLAVRIKGS 146

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>Y1154_METTH (O27222) Hypothetical protein MTH1154|
          Length = 146

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = -2

Query: 457 IKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVIT 278
           +   A  ++GDP + I    +    D++V+G+ G     +  LG+VSE  V +A C +  
Sbjct: 84  VSFRAVMREGDPADEIVKVAEEEDVDVIVMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHL 142

Query: 277 IK 272
           ++
Sbjct: 143 VR 144

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>MDH_NOCFA (Q5YTI1) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 334

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 212 PILTRASVVDGVLGSLIGLALDGDDGAFSMLDAV 313
           PI  R   +   + SL G+A++ +DGAF +LDA+
Sbjct: 40  PIRLRLLEIPAAVASLEGVAMELEDGAFPLLDAI 73

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>USPF_SHIFL (P0A4P8) Universal stress protein F|
          Length = 144

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -2

Query: 436 KQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIK 272
           ++G PK+ I    K++   ++++ S          LG+ +   V+HAEC V+ ++
Sbjct: 91  EEGSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144

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>USPF_ECOLI (P37903) Universal stress protein F|
          Length = 144

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -2

Query: 436 KQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIK 272
           ++G PK+ I    K++   ++++ S          LG+ +   V+HAEC V+ ++
Sbjct: 91  EEGSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144

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>USPF_ECOL6 (P0A4P6) Universal stress protein F|
          Length = 144

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -2

Query: 436 KQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIK 272
           ++G PK+ I    K++   ++++ S          LG+ +   V+HAEC V+ ++
Sbjct: 91  EEGSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144

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>USPF_ECO57 (P0A4P7) Universal stress protein F|
          Length = 144

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -2

Query: 436 KQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIK 272
           ++G PK+ I    K++   ++++ S          LG+ +   V+HAEC V+ ++
Sbjct: 91  EEGSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144

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>Y2028_MYCBO (P64922) Hypothetical protein Mb2028c|
          Length = 295

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 397 KRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIKR 269
           K     L+VVGS G G    + LG+VS   +  A  PVI  ++
Sbjct: 252 KSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294

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>Y2005_MYCTU (P64921) Hypothetical protein Rv2005c/MT2061|
          Length = 295

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 397 KRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVKHAECPVITIKR 269
           K     L+VVGS G G    + LG+VS   +  A  PVI  ++
Sbjct: 252 KSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294

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>Y031_HELPY (P64649) Hypothetical protein HP0031|
          Length = 137

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/90 (24%), Positives = 43/90 (47%)
 Frame = -2

Query: 541 DFQSMKQRDKIRGIHLLEYFVNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGS 362
           D+   +  ++ +   LL+ F +   +  I+CE+  K GD  +V+    K    DLL++G+
Sbjct: 51  DYGQTEALEEEKAKALLKQFEDAFKKENIECESVLKSGDLIDVVLDMAK--DYDLLLIGA 108

Query: 361 RGLGPFQRVFLGAVSEYCVKHAECPVITIK 272
                  R+F+   +   V+ +  PV+  K
Sbjct: 109 SESNLLYRLFISHQNS-LVEQSSIPVVIAK 137

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>Y027_HELPJ (P64650) Hypothetical protein jhp_0027|
          Length = 137

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/90 (24%), Positives = 43/90 (47%)
 Frame = -2

Query: 541 DFQSMKQRDKIRGIHLLEYFVNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGS 362
           D+   +  ++ +   LL+ F +   +  I+CE+  K GD  +V+    K    DLL++G+
Sbjct: 51  DYGQTEALEEEKAKALLKQFEDAFKKENIECESVLKSGDLIDVVLDMAK--DYDLLLIGA 108

Query: 361 RGLGPFQRVFLGAVSEYCVKHAECPVITIK 272
                  R+F+   +   V+ +  PV+  K
Sbjct: 109 SESNLLYRLFISHQNS-LVEQSSIPVVIAK 137

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>MAO1_SALTY (Q8ZPE8) NAD-dependent malic enzyme (EC 1.1.1.38) (NAD-ME)|
          Length = 565

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/81 (24%), Positives = 36/81 (44%)
 Frame = -2

Query: 481 VNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVK 302
           V +C  L    + W  + D   ++   V+ V+PD+L+  S   G F    +  + ++C +
Sbjct: 356 VQKCDNL----QHWDTENDVLSLL-DVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPR 410

Query: 301 HAECPVITIKRKANETPQDPI 239
               P+     +   TPQD I
Sbjct: 411 PIVMPLSNPTSRVEATPQDII 431

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>MAO1_SALTI (Q8Z728) NAD-dependent malic enzyme (EC 1.1.1.38) (NAD-ME)|
          Length = 565

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/81 (24%), Positives = 36/81 (44%)
 Frame = -2

Query: 481 VNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVK 302
           V +C  L    + W  + D   ++   V+ V+PD+L+  S   G F    +  + ++C +
Sbjct: 356 VQKCDNL----QHWDTENDVLSLL-DVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPR 410

Query: 301 HAECPVITIKRKANETPQDPI 239
               P+     +   TPQD I
Sbjct: 411 PIVMPLSNPTSRVEATPQDII 431

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>MAO1_SALPA (Q5PHY7) NAD-dependent malic enzyme (EC 1.1.1.38) (NAD-ME)|
          Length = 565

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/81 (24%), Positives = 36/81 (44%)
 Frame = -2

Query: 481 VNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVK 302
           V +C  L    + W  + D   ++   V+ V+PD+L+  S   G F    +  + ++C +
Sbjct: 356 VQKCDNL----QHWDTENDVLSLL-DVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPR 410

Query: 301 HAECPVITIKRKANETPQDPI 239
               P+     +   TPQD I
Sbjct: 411 PIVMPLSNPTSRVEATPQDII 431

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>MAO1_SALCH (Q57P88) NAD-dependent malic enzyme (EC 1.1.1.38) (NAD-ME)|
          Length = 565

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/81 (24%), Positives = 36/81 (44%)
 Frame = -2

Query: 481 VNECHRLGIKCEAWTKQGDPKEVICHEVKRVQPDLLVVGSRGLGPFQRVFLGAVSEYCVK 302
           V +C  L    + W  + D   ++   V+ V+PD+L+  S   G F    +  + ++C +
Sbjct: 356 VQKCDNL----QHWDTENDVLSLL-DVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPR 410

Query: 301 HAECPVITIKRKANETPQDPI 239
               P+     +   TPQD I
Sbjct: 411 PIVMPLSNPTSRVEATPQDII 431

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>HBA_AILME (P18970) Hemoglobin alpha subunit (Hemoglobin alpha chain)|
           (Alpha-globin)
          Length = 141

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 21/77 (27%), Positives = 37/77 (48%)
 Frame = +2

Query: 119 GRALQGLYY*FPATPRFYSVSTLNPSSSEEHPILTRASVVDGVLGSLIGLALDGDDGAFS 298
           G AL+  +  FP T  ++    L+P S++   +      V   L + +G  LD   GA S
Sbjct: 26  GEALERTFASFPTTKTYFPHFDLSPGSAQ---VKAHGKKVADALTTAVG-HLDDLPGALS 81

Query: 299 MLDAVLAHRAQENPLKW 349
            L  + AH+ + +P+ +
Sbjct: 82  ALSDLHAHKLRVDPVNF 98

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>AGC1_ASHGO (Q75AH6) Mitochondrial aspartate-glutamate transporter AGC1|
           (Aspartate-glutamate carrier 1)
          Length = 911

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 455 YPQSMAFIHEVLK*VNPSYLVSLLHALEVRR 547
           Y      + +++K VNP+YL  L+H +E+RR
Sbjct: 475 YVNEALTLEDIMKIVNPNYLNDLVHHMELRR 505

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>ZP1_RAT (O54766) Zona pellucida sperm-binding protein 1 precursor (Zona|
           pellucida glycoprotein 1) (Zp-1)
          Length = 617

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 285 TGHSACLTQYSLTAPKKTL*NG-PRPLLPTTRRSGWTLFTSWQITSFGS 428
           +GH+   T Y  T P     +  P P+ PT  +S W    SW++T   S
Sbjct: 168 SGHTGLTTLYPETHPTPAPPSSEPGPVGPTVPQSQWGTLGSWELTELDS 216

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>YIDR_ECOLI (P31455) Hypothetical protein yidR|
          Length = 416

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 166 SGSGWELVVQTLQSAPQN*SEERKRRYYRGWI 71
           SGS W ++V      PQ  S+E  R Y  GW+
Sbjct: 192 SGSHWCVLVSKTTPTPQPGSDEINRAYEEGWV 223


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,487,213
Number of Sequences: 219361
Number of extensions: 1829879
Number of successful extensions: 4719
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 4622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4719
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result