ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467394.1| Oryza sativa (japonica cultivar-group), mRNA 285 8e-74
2ref|XM_506934.1| PREDICTED Oryza sativa (japonica cultivar-group... 285 8e-74
3dbj|AK102318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 8e-74
4dbj|AK064357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 8e-74
5gb|AY108245.1| Zea mays PCO097696 mRNA sequence 274 3e-70
6gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence 121 3e-24
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
8dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
9emb|AM040273.1| Capsicum chinense mRNA for putative ethylene res... 56 1e-04
10ref|XM_467393.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
11dbj|AK109110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
12ref|XM_467392.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
13dbj|AK064638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
14ref|NM_121472.3| Arabidopsis thaliana unknown protein AT5G14680 ... 42 2.0
15gb|BT015743.1| Arabidopsis thaliana At5g14680 mRNA, complete cds 42 2.0
16gb|BT011776.1| Arabidopsis thaliana At5g14680 mRNA, complete cds 42 2.0
17gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complet... 42 2.0
18emb|AL109982.1|HSJ281E18 Human DNA sequence from clone RP1-281E1... 42 2.0
19emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BA... 42 2.0
20gb|AC026512.6| Homo sapiens chromosome 15, clone RP11-375D9, com... 42 2.0
21emb|BX833643.1|CNS0A1LK Arabidopsis thaliana Full-length cDNA Co... 42 2.0
22emb|BX832760.1|CNS0A0Y8 Arabidopsis thaliana Full-length cDNA Co... 42 2.0
23emb|BX831726.1|CNS0A0XU Arabidopsis thaliana Full-length cDNA Co... 42 2.0
24gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 42 2.0
25ref|XM_517103.1| PREDICTED: Pan troglodytes similar to SH3 domai... 40 8.1
26ref|XM_359763.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.1
27ref|NM_015092.3| Homo sapiens PI-3-kinase-related kinase SMG-1 (... 40 8.1
28gb|AC182396.3| Pan troglodytes BAC clone CH251-244D19 from chrom... 40 8.1
29ref|XM_380809.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 8.1
30ref|XM_846459.1| PREDICTED: Canis familiaris similar to PI-3-kin... 40 8.1
31gb|AC104872.8| Mus musculus chromosome 12, clone RP23-360C2, com... 40 8.1
32ref|NM_018986.2| Homo sapiens SH3 domain and tetratricopeptide r... 40 8.1
33gb|BC030283.1| Homo sapiens SH3 domain and tetratricopeptide rep... 40 8.1
34emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 8.1
35gb|AC108508.2| Genomic sequence for Mus musculus, clone RP23-437... 40 8.1
36gb|AF395444.1| Homo sapiens PI-3-kinase ATX mRNA, complete cds 40 8.1
37dbj|AK126165.1| Homo sapiens cDNA FLJ44177 fis, clone THYMU2037226 40 8.1
38gb|AC182463.3| Pan troglodytes BAC clone CH251-511B8 from chromo... 40 8.1
39gb|AC025289.6| Homo sapiens chromosome 16 clone RP11-533D19, com... 40 8.1
40gb|AC020716.3| Homo sapiens BAC clone RP11-449G13 from 16, compl... 40 8.1
41gb|AY014957.1| Homo sapiens PI-3-kinase-related kinase SMG-1 (SM... 40 8.1
42gb|AF186377.1|AF186377 Homo sapiens LIP isoform of BLIP (BLIP) m... 40 8.1
43gb|AC179924.2| Mus musculus BAC clone RP23-270O20 from chromosom... 40 8.1
44gb|AC104650.2| Homo sapiens BAC clone RP11-117J13 from 4, comple... 40 8.1
45dbj|AK222865.1| Homo sapiens mRNA for SH3 domain and tetratricop... 40 8.1
46gb|AC026472.8| Homo sapiens chromosome 16 clone RP11-511J24, com... 40 8.1
47gb|AC092287.4| Homo sapiens chromosome 16 clone CTD-2288F12, com... 40 8.1
48gb|AC068769.19| Homo sapiens 3 BAC RP11-14I2 (Roswell Park Cance... 40 8.1
49ref|XM_574544.1| PREDICTED: Rattus norvegicus similar to PI-3-ki... 40 8.1
50emb|BX546496.3| Mouse DNA sequence from clone RP24-85I16 on chro... 40 8.1
51dbj|AK000363.1| Homo sapiens cDNA FLJ20356 fis, clone HEP15821 40 8.1
52dbj|AK074402.1| Homo sapiens cDNA FLJ23822 fis, clone HUV00387 40 8.1
53dbj|AK074359.1| Homo sapiens cDNA FLJ23779 fis, clone HEP20815, ... 40 8.1
54emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 8.1
55emb|Y12244.1|GGCRABPI3 Gallus gallus CRABP-I gene, exon 3 40 8.1
56emb|CT030697.6| Mouse DNA sequence from clone RP23-274A4 on chro... 40 8.1
57emb|AL606919.12| Mouse DNA sequence from clone RP23-264F10 on ch... 40 8.1
58dbj|AB061371.1| Homo sapiens smg-1 mRNA for phosphatidylinositol... 40 8.1
59dbj|AB007881.2| Homo sapiens KIAA0421 mRNA, partial cds 40 8.1
60dbj|AK074093.1| Homo sapiens mRNA for FLJ00164 protein 40 8.1 
>ref|XM_467394.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 772

 Score =  285 bits (144), Expect = 8e-74
 Identities = 288/336 (85%)
 Strand = Plus / Minus

                                                                       
Query: 258 tcattggccttgcgcttgatggtgatgacggggcattcagcatgcttgacgcagtactcg 317
           |||| |||||| || |||||||||||||| || || || |||||||| || ||| |||||
Sbjct: 527 tcatcggccttccgtttgatggtgatgactggacagtcggcatgcttaacacagaactcg 468

                                                                       
Query: 318 ctcaccgcgcccaagaaaaccctctgaaatggcccgaggcctctacttcccacaactaga 377
           ||||| | ||||| |||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 467 ctcactgtgcccacgaaaaccctctgaaatggtccaaggcccctacttcccacaactaga 408

                                                                       
Query: 378 agatcaggctggactctcttcacctcatggcagataacctcctttggatccccctgtttg 437
           ||||| || || ||||||||||||||   |||||| || |||||||||||||| ||||| 
Sbjct: 407 agatctggttgaactctcttcacctcgctgcagatgacttcctttggatccccttgttta 348

                                                                       
Query: 438 gtccaagcttcacattttatccccaatcgatggcattcattcacgaagtactcaagtagg 497
            |||| ||||||||||||||| ||| | ||||||||| |||||| |||| ||| || | |
Sbjct: 347 atccatgcttcacattttatctccagttgatggcattgattcacaaagtgctcgagcaag 288

                                                                       
Query: 498 tgaatccctcttatcttgtctctctgcttcatgctctggaagtccgtcggtgatgcatat 557
           |||| ||||||||||||||||||||| ||||| ||||| ||||| |  || |||||||| 
Sbjct: 287 tgaagccctcttatcttgtctctctgtttcattctctgaaagtctggtggagatgcatag 228

                                               
Query: 558 atactatccacatcatcaaatccgtcctcgtcgggg 593
           || ||||||| |||||||||||||||||||||||||
Sbjct: 227 atgctatccatatcatcaaatccgtcctcgtcgggg 192



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 180 gtacattaaacccatcaagcagtgaagaacatcccattctca 221
           |||||||||||||||  |||||||||||| ||| ||||||||
Sbjct: 615 gtacattaaacccattgagcagtgaagaatatctcattctca 574



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcttcactctagttttgggg 121
           ||||||||||||||||||||
Sbjct: 689 tcttcactctagttttgggg 670
to top
>ref|XM_506934.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060O16.24
           mRNA
          Length = 845

 Score =  285 bits (144), Expect = 8e-74
 Identities = 288/336 (85%)
 Strand = Plus / Minus

                                                                       
Query: 258 tcattggccttgcgcttgatggtgatgacggggcattcagcatgcttgacgcagtactcg 317
           |||| |||||| || |||||||||||||| || || || |||||||| || ||| |||||
Sbjct: 578 tcatcggccttccgtttgatggtgatgactggacagtcggcatgcttaacacagaactcg 519

                                                                       
Query: 318 ctcaccgcgcccaagaaaaccctctgaaatggcccgaggcctctacttcccacaactaga 377
           ||||| | ||||| |||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 518 ctcactgtgcccacgaaaaccctctgaaatggtccaaggcccctacttcccacaactaga 459

                                                                       
Query: 378 agatcaggctggactctcttcacctcatggcagataacctcctttggatccccctgtttg 437
           ||||| || || ||||||||||||||   |||||| || |||||||||||||| ||||| 
Sbjct: 458 agatctggttgaactctcttcacctcgctgcagatgacttcctttggatccccttgttta 399

                                                                       
Query: 438 gtccaagcttcacattttatccccaatcgatggcattcattcacgaagtactcaagtagg 497
            |||| ||||||||||||||| ||| | ||||||||| |||||| |||| ||| || | |
Sbjct: 398 atccatgcttcacattttatctccagttgatggcattgattcacaaagtgctcgagcaag 339

                                                                       
Query: 498 tgaatccctcttatcttgtctctctgcttcatgctctggaagtccgtcggtgatgcatat 557
           |||| ||||||||||||||||||||| ||||| ||||| ||||| |  || |||||||| 
Sbjct: 338 tgaagccctcttatcttgtctctctgtttcattctctgaaagtctggtggagatgcatag 279

                                               
Query: 558 atactatccacatcatcaaatccgtcctcgtcgggg 593
           || ||||||| |||||||||||||||||||||||||
Sbjct: 278 atgctatccatatcatcaaatccgtcctcgtcgggg 243



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 180 gtacattaaacccatcaagcagtgaagaacatcccattctca 221
           |||||||||||||||  |||||||||||| ||| ||||||||
Sbjct: 666 gtacattaaacccattgagcagtgaagaatatctcattctca 625



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcttcactctagttttgggg 121
           ||||||||||||||||||||
Sbjct: 740 tcttcactctagttttgggg 721
to top
>dbj|AK102318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090F20, full
           insert sequence
          Length = 771

 Score =  285 bits (144), Expect = 8e-74
 Identities = 288/336 (85%)
 Strand = Plus / Minus

                                                                       
Query: 258 tcattggccttgcgcttgatggtgatgacggggcattcagcatgcttgacgcagtactcg 317
           |||| |||||| || |||||||||||||| || || || |||||||| || ||| |||||
Sbjct: 526 tcatcggccttccgtttgatggtgatgactggacagtcggcatgcttaacacagaactcg 467

                                                                       
Query: 318 ctcaccgcgcccaagaaaaccctctgaaatggcccgaggcctctacttcccacaactaga 377
           ||||| | ||||| |||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 466 ctcactgtgcccacgaaaaccctctgaaatggtccaaggcccctacttcccacaactaga 407

                                                                       
Query: 378 agatcaggctggactctcttcacctcatggcagataacctcctttggatccccctgtttg 437
           ||||| || || ||||||||||||||   |||||| || |||||||||||||| ||||| 
Sbjct: 406 agatctggttgaactctcttcacctcgctgcagatgacttcctttggatccccttgttta 347

                                                                       
Query: 438 gtccaagcttcacattttatccccaatcgatggcattcattcacgaagtactcaagtagg 497
            |||| ||||||||||||||| ||| | ||||||||| |||||| |||| ||| || | |
Sbjct: 346 atccatgcttcacattttatctccagttgatggcattgattcacaaagtgctcgagcaag 287

                                                                       
Query: 498 tgaatccctcttatcttgtctctctgcttcatgctctggaagtccgtcggtgatgcatat 557
           |||| ||||||||||||||||||||| ||||| ||||| ||||| |  || |||||||| 
Sbjct: 286 tgaagccctcttatcttgtctctctgtttcattctctgaaagtctggtggagatgcatag 227

                                               
Query: 558 atactatccacatcatcaaatccgtcctcgtcgggg 593
           || ||||||| |||||||||||||||||||||||||
Sbjct: 226 atgctatccatatcatcaaatccgtcctcgtcgggg 191



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 180 gtacattaaacccatcaagcagtgaagaacatcccattctca 221
           |||||||||||||||  |||||||||||| ||| ||||||||
Sbjct: 614 gtacattaaacccattgagcagtgaagaatatctcattctca 573



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcttcactctagttttgggg 121
           ||||||||||||||||||||
Sbjct: 688 tcttcactctagttttgggg 669
to top
>dbj|AK064357.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B05, full
           insert sequence
          Length = 845

 Score =  285 bits (144), Expect = 8e-74
 Identities = 288/336 (85%)
 Strand = Plus / Minus

                                                                       
Query: 258 tcattggccttgcgcttgatggtgatgacggggcattcagcatgcttgacgcagtactcg 317
           |||| |||||| || |||||||||||||| || || || |||||||| || ||| |||||
Sbjct: 578 tcatcggccttccgtttgatggtgatgactggacagtcggcatgcttaacacagaactcg 519

                                                                       
Query: 318 ctcaccgcgcccaagaaaaccctctgaaatggcccgaggcctctacttcccacaactaga 377
           ||||| | ||||| |||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 518 ctcactgtgcccacgaaaaccctctgaaatggtccaaggcccctacttcccacaactaga 459

                                                                       
Query: 378 agatcaggctggactctcttcacctcatggcagataacctcctttggatccccctgtttg 437
           ||||| || || ||||||||||||||   |||||| || |||||||||||||| ||||| 
Sbjct: 458 agatctggttgaactctcttcacctcgctgcagatgacttcctttggatccccttgttta 399

                                                                       
Query: 438 gtccaagcttcacattttatccccaatcgatggcattcattcacgaagtactcaagtagg 497
            |||| ||||||||||||||| ||| | ||||||||| |||||| |||| ||| || | |
Sbjct: 398 atccatgcttcacattttatctccagttgatggcattgattcacaaagtgctcgagcaag 339

                                                                       
Query: 498 tgaatccctcttatcttgtctctctgcttcatgctctggaagtccgtcggtgatgcatat 557
           |||| ||||||||||||||||||||| ||||| ||||| ||||| |  || |||||||| 
Sbjct: 338 tgaagccctcttatcttgtctctctgtttcattctctgaaagtctggtggagatgcatag 279

                                               
Query: 558 atactatccacatcatcaaatccgtcctcgtcgggg 593
           || ||||||| |||||||||||||||||||||||||
Sbjct: 278 atgctatccatatcatcaaatccgtcctcgtcgggg 243



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 180 gtacattaaacccatcaagcagtgaagaacatcccattctca 221
           |||||||||||||||  |||||||||||| ||| ||||||||
Sbjct: 666 gtacattaaacccattgagcagtgaagaatatctcattctca 625



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcttcactctagttttgggg 121
           ||||||||||||||||||||
Sbjct: 740 tcttcactctagttttgggg 721
to top
>gb|AY108245.1| Zea mays PCO097696 mRNA sequence
          Length = 967

 Score =  274 bits (138), Expect = 3e-70
 Identities = 273/318 (85%)
 Strand = Plus / Minus

                                                                       
Query: 276 atggtgatgacggggcattcagcatgcttgacgcagtactcgctcaccgcgcccaagaaa 335
           |||||||||||||||||||| |||||||| |||||| |||||||||||| ||||| ||||
Sbjct: 585 atggtgatgacggggcattcggcatgcttaacgcagaactcgctcaccgtgcccacgaaa 526

                                                                       
Query: 336 accctctgaaatggcccgaggcctctacttcccacaactagaagatcaggctggactctc 395
           ||||||||||||||||| || || |||||||||||||||||||| |||||||||||||||
Sbjct: 525 accctctgaaatggcccaagacccctacttcccacaactagaaggtcaggctggactctc 466

                                                                       
Query: 396 ttcacctcatggcagataacctcctttggatccccctgtttggtccaagcttcacatttt 455
           ||||| ||   ||||||||||||||||||||| || ||| || |||| || || ||||||
Sbjct: 465 ttcacttcgctgcagataacctcctttggatctccatgtctgatccatgcctcgcatttt 406

                                                                       
Query: 456 atccccaatcgatggcattcattcacgaagtactcaagtaggtgaatccctcttatcttg 515
           ||||| ||  |||||||||  || || |||||||| || |  |||| |||||||||||||
Sbjct: 405 atccctaactgatggcattggtttacaaagtactcgagcaaatgaagccctcttatcttg 346

                                                                       
Query: 516 tctctctgcttcatgctctggaagtccgtcggtgatgcatatatactatccacatcatca 575
           ||||||||||||||    || ||||||  ||| || ||||| || |||||||  ||||||
Sbjct: 345 tctctctgcttcatttggtgaaagtcctccggcgaagcatagatgctatccatgtcatca 286

                             
Query: 576 aatccgtcctcgtcgggg 593
           ||||||||||||||||||
Sbjct: 285 aatccgtcctcgtcgggg 268
to top
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence
          Length = 158050

 Score =  121 bits (61), Expect = 3e-24
 Identities = 106/121 (87%)
 Strand = Plus / Minus

                                                                         
Query: 338   cctctgaaatggcccgaggcctctacttcccacaactagaagatcaggctggactctctt 397
             |||||||||||| || ||||| ||||||||||||||||||||||| || || ||||||||
Sbjct: 81165 cctctgaaatggtccaaggcccctacttcccacaactagaagatctggttgaactctctt 81106

                                                                         
Query: 398   cacctcatggcagataacctcctttggatccccctgtttggtccaagcttcacattttat 457
             ||||||   |||||| || |||||||||||||| |||||  |||| ||||||||||||||
Sbjct: 81105 cacctcgctgcagatgacttcctttggatccccttgtttaatccatgcttcacattttat 81046

              
Query: 458   c 458
             |
Sbjct: 81045 c 81045



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                         
Query: 466   gatggcattcattcacgaagtactcaagtaggtgaatccctcttatcttgtctctctgct 525
             ||||||||| |||||| |||| ||| || | ||||| ||||||||||||||||||||| |
Sbjct: 80869 gatggcattgattcacaaagtgctcgagcaagtgaagccctcttatcttgtctctctgtt 80810

                                                                    
Query: 526   tcatgctctggaagtccgtcggtgatgcatatatactatccacatcatcaaatcc 580
             |||| ||||| ||||| |  || |||||||| || ||||||| ||||||||||||
Sbjct: 80809 tcattctctgaaagtctggtggagatgcatagatgctatccatatcatcaaatcc 80755



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                         
Query: 258   tcattggccttgcgcttgatggtgatgacggggcattcagcatgcttgacgcagtactcg 317
             |||| |||||| || |||||||||||||| || || || |||||||| || ||| |||||
Sbjct: 83807 tcatcggccttccgtttgatggtgatgactggacagtcggcatgcttaacacagaactcg 83748

                                    
Query: 318   ctcaccgcgcccaagaaaaccct 340
             ||||| | ||||| |||||||||
Sbjct: 83747 ctcactgtgcccacgaaaaccct 83725



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 180   gtacattaaacccatcaagcagtgaagaacatcccattctca 221
             |||||||||||||||  |||||||||||| ||| ||||||||
Sbjct: 83895 gtacattaaacccattgagcagtgaagaatatctcattctca 83854



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tcttcactctagttttgggg 121
             ||||||||||||||||||||
Sbjct: 83969 tcttcactctagttttgggg 83950
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  121 bits (61), Expect = 3e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                            
Query: 338      cctctgaaatggcccgaggcctctacttcccacaactagaagatcaggctggactctctt 397
                |||||||||||| || ||||| ||||||||||||||||||||||| || || ||||||||
Sbjct: 29281466 cctctgaaatggtccaaggcccctacttcccacaactagaagatctggttgaactctctt 29281525

                                                                            
Query: 398      cacctcatggcagataacctcctttggatccccctgtttggtccaagcttcacattttat 457
                ||||||   |||||| || |||||||||||||| |||||  |||| ||||||||||||||
Sbjct: 29281526 cacctcgctgcagatgacttcctttggatccccttgtttaatccatgcttcacattttat 29281585

                 
Query: 458      c 458
                |
Sbjct: 29281586 c 29281586



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                            
Query: 466      gatggcattcattcacgaagtactcaagtaggtgaatccctcttatcttgtctctctgct 525
                ||||||||| |||||| |||| ||| || | ||||| ||||||||||||||||||||| |
Sbjct: 29281762 gatggcattgattcacaaagtgctcgagcaagtgaagccctcttatcttgtctctctgtt 29281821

                                                                       
Query: 526      tcatgctctggaagtccgtcggtgatgcatatatactatccacatcatcaaatcc 580
                |||| ||||| ||||| |  || |||||||| || ||||||| ||||||||||||
Sbjct: 29281822 tcattctctgaaagtctggtggagatgcatagatgctatccatatcatcaaatcc 29281876



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                            
Query: 258      tcattggccttgcgcttgatggtgatgacggggcattcagcatgcttgacgcagtactcg 317
                |||| |||||| || |||||||||||||| || || || |||||||| || ||| |||||
Sbjct: 29278823 tcatcggccttccgtttgatggtgatgactggacagtcggcatgcttaacacagaactcg 29278882

                                       
Query: 318      ctcaccgcgcccaagaaaaccct 340
                ||||| | ||||| |||||||||
Sbjct: 29278883 ctcactgtgcccacgaaaaccct 29278905



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 180      gtacattaaacccatcaagcagtgaagaacatcccattctca 221
                |||||||||||||||  |||||||||||| ||| ||||||||
Sbjct: 29278735 gtacattaaacccattgagcagtgaagaatatctcattctca 29278776



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 102      tcttcactctagttttgggg 121
                ||||||||||||||||||||
Sbjct: 29278661 tcttcactctagttttgggg 29278680
to top
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0060O16
          Length = 164373

 Score =  121 bits (61), Expect = 3e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                         
Query: 338   cctctgaaatggcccgaggcctctacttcccacaactagaagatcaggctggactctctt 397
             |||||||||||| || ||||| ||||||||||||||||||||||| || || ||||||||
Sbjct: 78811 cctctgaaatggtccaaggcccctacttcccacaactagaagatctggttgaactctctt 78870

                                                                         
Query: 398   cacctcatggcagataacctcctttggatccccctgtttggtccaagcttcacattttat 457
             ||||||   |||||| || |||||||||||||| |||||  |||| ||||||||||||||
Sbjct: 78871 cacctcgctgcagatgacttcctttggatccccttgtttaatccatgcttcacattttat 78930

              
Query: 458   c 458
             |
Sbjct: 78931 c 78931



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                         
Query: 466   gatggcattcattcacgaagtactcaagtaggtgaatccctcttatcttgtctctctgct 525
             ||||||||| |||||| |||| ||| || | ||||| ||||||||||||||||||||| |
Sbjct: 79107 gatggcattgattcacaaagtgctcgagcaagtgaagccctcttatcttgtctctctgtt 79166

                                                                    
Query: 526   tcatgctctggaagtccgtcggtgatgcatatatactatccacatcatcaaatcc 580
             |||| ||||| ||||| |  || |||||||| || ||||||| ||||||||||||
Sbjct: 79167 tcattctctgaaagtctggtggagatgcatagatgctatccatatcatcaaatcc 79221



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                         
Query: 258   tcattggccttgcgcttgatggtgatgacggggcattcagcatgcttgacgcagtactcg 317
             |||| |||||| || |||||||||||||| || || || |||||||| || ||| |||||
Sbjct: 76168 tcatcggccttccgtttgatggtgatgactggacagtcggcatgcttaacacagaactcg 76227

                                    
Query: 318   ctcaccgcgcccaagaaaaccct 340
             ||||| | ||||| |||||||||
Sbjct: 76228 ctcactgtgcccacgaaaaccct 76250



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 180   gtacattaaacccatcaagcagtgaagaacatcccattctca 221
             |||||||||||||||  |||||||||||| ||| ||||||||
Sbjct: 76080 gtacattaaacccattgagcagtgaagaatatctcattctca 76121



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   tcttcactctagttttgggg 121
             ||||||||||||||||||||
Sbjct: 76006 tcttcactctagttttgggg 76025
to top
>emb|AM040273.1| Capsicum chinense mRNA for putative ethylene response protein (erp
           gene)
          Length = 931

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 291 cattcagcatgcttgacgcagtactcgctcaccgcgcccaagaaaaccctctgaaa 346
           ||||||||||||||||| ||| ||||||| || |  |||| |||||||||||||||
Sbjct: 707 cattcagcatgcttgacacagaactcgcttacagttcccacgaaaaccctctgaaa 652
to top
>ref|XM_467393.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 905

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 180 gtacattaaacccatcaagcagtgaagaacatcccattctca 221
           |||||||||||||||  |||||||||||| ||| ||||||||
Sbjct: 856 gtacattaaacccattgagcagtgaagaatatctcattctca 897



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 tcttcactctagttttgggg 121
           ||||||||||||||||||||
Sbjct: 782 tcttcactctagttttgggg 801
to top
>dbj|AK109110.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-B12, full
           insert sequence
          Length = 905

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 180 gtacattaaacccatcaagcagtgaagaacatcccattctca 221
           |||||||||||||||  |||||||||||| ||| ||||||||
Sbjct: 856 gtacattaaacccattgagcagtgaagaatatctcattctca 897



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 tcttcactctagttttgggg 121
           ||||||||||||||||||||
Sbjct: 782 tcttcactctagttttgggg 801
to top
>ref|XM_467392.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 898

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 180 gtacattaaacccatcaagcagtgaagaacatcccattc 218
           |||||||||||||||  |||||||||||| ||| |||||
Sbjct: 39  gtacattaaacccattgagcagtgaagaatatctcattc 1



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcttcactctagttttgggg 121
           ||||||||||||||||||||
Sbjct: 113 tcttcactctagttttgggg 94
to top
>dbj|AK064638.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A10, full
           insert sequence
          Length = 1495

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 180 gtacattaaacccatcaagcagtgaagaacatcccattc 218
           |||||||||||||||  |||||||||||| ||| |||||
Sbjct: 39  gtacattaaacccattgagcagtgaagaatatctcattc 1



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcttcactctagttttgggg 121
           ||||||||||||||||||||
Sbjct: 113 tcttcactctagttttgggg 94
to top
>ref|NM_121472.3| Arabidopsis thaliana unknown protein AT5G14680 mRNA, complete cds
          Length = 1297

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 345 aatggcccgaggcctctacttcccacaactagaagatcaggctggactctcttcacctca 404
           ||||| ||||| || | |||||||||||| |||| ||| ||| |||||| | |||| |||
Sbjct: 469 aatgggccgagaccacgacttcccacaaccagaaaatctggccggactcgcctcacttca 410

                
Query: 405 tggca 409
           |||||
Sbjct: 409 tggca 405
to top
>gb|BT015743.1| Arabidopsis thaliana At5g14680 mRNA, complete cds
          Length = 528

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 345 aatggcccgaggcctctacttcccacaactagaagatcaggctggactctcttcacctca 404
           ||||| ||||| || | |||||||||||| |||| ||| ||| |||||| | |||| |||
Sbjct: 413 aatgggccgagaccacgacttcccacaaccagaaaatctggccggactcgcctcacttca 354

                
Query: 405 tggca 409
           |||||
Sbjct: 353 tggca 349
to top
>gb|BT011776.1| Arabidopsis thaliana At5g14680 mRNA, complete cds
          Length = 830

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 345 aatggcccgaggcctctacttcccacaactagaagatcaggctggactctcttcacctca 404
           ||||| ||||| || | |||||||||||| |||| ||| ||| |||||| | |||| |||
Sbjct: 494 aatgggccgagaccacgacttcccacaaccagaaaatctggccggactcgcctcacttca 435

                
Query: 405 tggca 409
           |||||
Sbjct: 434 tggca 430
to top
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence
          Length = 245757

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 511    tcttgtctctctgcttcatgc 531
              |||||||||||||||||||||
Sbjct: 205103 tcttgtctctctgcttcatgc 205083
to top
>emb|AL109982.1|HSJ281E18 Human DNA sequence from clone RP1-281E18 on chromosome 6p12.1-12.3,
            complete sequence
          Length = 74586

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 48   ttgtctgtctactaggcatcc 68
            |||||||||||||||||||||
Sbjct: 2051 ttgtctgtctactaggcatcc 2071
to top
>emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BAC clone T15N1 (ESSA project)
          Length = 86574

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                         
Query: 345   aatggcccgaggcctctacttcccacaactagaagatcaggctggactctcttcacctca 404
             ||||| ||||| || | |||||||||||| |||| ||| ||| |||||| | |||| |||
Sbjct: 68958 aatgggccgagaccacgacttcccacaaccagaaaatctggccggactcgcctcacttca 69017

                  
Query: 405   tggca 409
             |||||
Sbjct: 69018 tggca 69022
to top
>gb|AC026512.6| Homo sapiens chromosome 15, clone RP11-375D9, complete sequence
          Length = 90707

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 150   tcccagccactcccagattttattc 174
             ||||||||| |||||||||||||||
Sbjct: 66535 tcccagccattcccagattttattc 66511
to top
>emb|BX833643.1|CNS0A1LK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL68ZA07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 829

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 345 aatggcccgaggcctctacttcccacaactagaagatcaggctggactctcttcacctca 404
           ||||| ||||| || | |||||||||||| |||| ||| ||| |||||| | |||| |||
Sbjct: 469 aatgggccgagaccacgacttcccacaaccagaaaatctggccggactcgcctcacttca 410

                
Query: 405 tggca 409
           |||||
Sbjct: 409 tggca 405
to top
>emb|BX832760.1|CNS0A0Y8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH9ZB09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1312

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 345 aatggcccgaggcctctacttcccacaactagaagatcaggctggactctcttcacctca 404
           ||||| ||||| || | |||||||||||| |||| ||| ||| |||||| | |||| |||
Sbjct: 919 aatgggccgagaccacgacttcccacaaccagaaaatctggccggactcgcctcacttca 860

                
Query: 405 tggca 409
           |||||
Sbjct: 859 tggca 855
to top
>emb|BX831726.1|CNS0A0XU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH26ZB12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1288

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 345 aatggcccgaggcctctacttcccacaactagaagatcaggctggactctcttcacctca 404
           ||||| ||||| || | |||||||||||| |||| ||| ||| |||||| | |||| |||
Sbjct: 460 aatgggccgagaccacgacttcccacaaccagaaaatctggccggactcgcctcacttca 401

                
Query: 405 tggca 409
           |||||
Sbjct: 400 tggca 396
to top
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 347     tggcccgaggcctctacttcccaca 371
               ||||||||||||||||||| |||||
Sbjct: 1048994 tggcccgaggcctctacttgccaca 1049018
to top
>ref|XM_517103.1| PREDICTED: Pan troglodytes similar to SH3 domain and
            tetratricopeptide repeats 1 (LOC461113), mRNA
          Length = 3573

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  tcgtcgatggggtcctgggg 253
            ||||||||||||||||||||
Sbjct: 1124 tcgtcgatggggtcctgggg 1105
to top
>ref|XM_359763.1| Magnaporthe grisea 70-15 hypothetical protein (MG05014.4) partial
           mRNA
          Length = 684

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 559 tactatccacatcatcaaat 578
           ||||||||||||||||||||
Sbjct: 556 tactatccacatcatcaaat 537
to top
>ref|NM_015092.3| Homo sapiens PI-3-kinase-related kinase SMG-1 (SMG1), mRNA
          Length = 15739

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ctggactctcttcacctcat 405
            ||||||||||||||||||||
Sbjct: 5999 ctggactctcttcacctcat 5980
to top
>gb|AC182396.3| Pan troglodytes BAC clone CH251-244D19 from chromosome 16, complete
              sequence
          Length = 175231

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    ctggactctcttcacctcat 405
              ||||||||||||||||||||
Sbjct: 151464 ctggactctcttcacctcat 151445
to top
>ref|XM_380809.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00633.1)
             partial mRNA
          Length = 11976

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 498   tgaatccctcttatcttgtctctctgct 525
             |||||| ||||| |||||||||||||||
Sbjct: 10056 tgaatctctcttctcttgtctctctgct 10029
to top
>ref|XM_846459.1| PREDICTED: Canis familiaris similar to PI-3-kinase-related kinase
            SMG-1 (LOC479832), mRNA
          Length = 12301

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ctggactctcttcacctcat 405
            ||||||||||||||||||||
Sbjct: 6120 ctggactctcttcacctcat 6101
to top
>gb|AC104872.8| Mus musculus chromosome 12, clone RP23-360C2, complete sequence
          Length = 196850

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 516    tctctctgcttcatgctctg 535
              ||||||||||||||||||||
Sbjct: 106508 tctctctgcttcatgctctg 106527
to top
>ref|NM_018986.2| Homo sapiens SH3 domain and tetratricopeptide repeats 1 (SH3TC1),
           mRNA
          Length = 4239

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 234 tcgtcgatggggtcctgggg 253
           ||||||||||||||||||||
Sbjct: 942 tcgtcgatggggtcctgggg 923
to top
>gb|BC030283.1| Homo sapiens SH3 domain and tetratricopeptide repeats 1, mRNA (cDNA
           clone IMAGE:5217119), containing frame-shift errors
          Length = 3487

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 234 tcgtcgatggggtcctgggg 253
           ||||||||||||||||||||
Sbjct: 722 tcgtcgatggggtcctgggg 703
to top
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
               hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 555     tatatactatccacatcatc 574
               ||||||||||||||||||||
Sbjct: 1500550 tatatactatccacatcatc 1500569
to top
>gb|AC108508.2| Genomic sequence for Mus musculus, clone RP23-437O14, complete
            sequence
          Length = 196162

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 514  tgtctctctgcttcatgctc 533
            ||||||||||||||||||||
Sbjct: 8152 tgtctctctgcttcatgctc 8133
to top
>gb|AF395444.1| Homo sapiens PI-3-kinase ATX mRNA, complete cds
          Length = 12464

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ctggactctcttcacctcat 405
            ||||||||||||||||||||
Sbjct: 5646 ctggactctcttcacctcat 5627
to top
>dbj|AK126165.1| Homo sapiens cDNA FLJ44177 fis, clone THYMU2037226
          Length = 4293

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  tcgtcgatggggtcctgggg 253
            ||||||||||||||||||||
Sbjct: 1021 tcgtcgatggggtcctgggg 1002
to top
>gb|AC182463.3| Pan troglodytes BAC clone CH251-511B8 from chromosome 16, complete
            sequence
          Length = 194406

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  ctggactctcttcacctcat 405
            ||||||||||||||||||||
Sbjct: 7137 ctggactctcttcacctcat 7156
to top
>gb|AC025289.6| Homo sapiens chromosome 16 clone RP11-533D19, complete sequence
          Length = 185047

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    ctggactctcttcacctcat 405
              ||||||||||||||||||||
Sbjct: 179875 ctggactctcttcacctcat 179894
to top
>gb|AC020716.3| Homo sapiens BAC clone RP11-449G13 from 16, complete sequence
          Length = 171805

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   ctggactctcttcacctcat 405
             ||||||||||||||||||||
Sbjct: 34841 ctggactctcttcacctcat 34822
to top
>gb|AY014957.1| Homo sapiens PI-3-kinase-related kinase SMG-1 (SMG1) mRNA, complete
            cds
          Length = 11036

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ctggactctcttcacctcat 405
            ||||||||||||||||||||
Sbjct: 4218 ctggactctcttcacctcat 4199
to top
>gb|AF186377.1|AF186377 Homo sapiens LIP isoform of BLIP (BLIP) mRNA, complete cds
          Length = 9138

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ctggactctcttcacctcat 405
            ||||||||||||||||||||
Sbjct: 2320 ctggactctcttcacctcat 2301
to top
>gb|AC179924.2| Mus musculus BAC clone RP23-270O20 from chromosome 12, complete
             sequence
          Length = 217229

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 516   tctctctgcttcatgctctg 535
             ||||||||||||||||||||
Sbjct: 51316 tctctctgcttcatgctctg 51297
to top
>gb|AC104650.2| Homo sapiens BAC clone RP11-117J13 from 4, complete sequence
          Length = 163948

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    tcgtcgatggggtcctgggg 253
              ||||||||||||||||||||
Sbjct: 119407 tcgtcgatggggtcctgggg 119388
to top
>dbj|AK222865.1| Homo sapiens mRNA for SH3 domain and tetratricopeptide repeats 1
           variant, clone: HEP15821
          Length = 3752

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 234 tcgtcgatggggtcctgggg 253
           ||||||||||||||||||||
Sbjct: 453 tcgtcgatggggtcctgggg 434
to top
>gb|AC026472.8| Homo sapiens chromosome 16 clone RP11-511J24, complete sequence
          Length = 185047

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    ctggactctcttcacctcat 405
              ||||||||||||||||||||
Sbjct: 179875 ctggactctcttcacctcat 179894
to top
>gb|AC092287.4| Homo sapiens chromosome 16 clone CTD-2288F12, complete sequence
          Length = 116478

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   ctggactctcttcacctcat 405
             ||||||||||||||||||||
Sbjct: 11082 ctggactctcttcacctcat 11101
to top
>gb|AC068769.19| Homo sapiens 3 BAC RP11-14I2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 191246

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   cccagccactcccagatttt 170
             ||||||||||||||||||||
Sbjct: 94214 cccagccactcccagatttt 94233
to top
>ref|XM_574544.1| PREDICTED: Rattus norvegicus similar to PI-3-kinase-related kinase
            SMG-1 isoform 2 (LOC499251), mRNA
          Length = 3373

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ctggactctcttcacctcat 405
            ||||||||||||||||||||
Sbjct: 2173 ctggactctcttcacctcat 2154
to top
>emb|BX546496.3| Mouse DNA sequence from clone RP24-85I16 on chromosome X, complete
             sequence
          Length = 89031

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   tgcatatatactatccacat 570
             ||||||||||||||||||||
Sbjct: 30006 tgcatatatactatccacat 29987
to top
>dbj|AK000363.1| Homo sapiens cDNA FLJ20356 fis, clone HEP15821
          Length = 3751

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 234 tcgtcgatggggtcctgggg 253
           ||||||||||||||||||||
Sbjct: 453 tcgtcgatggggtcctgggg 434
to top
>dbj|AK074402.1| Homo sapiens cDNA FLJ23822 fis, clone HUV00387
          Length = 4239

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 234 tcgtcgatggggtcctgggg 253
           ||||||||||||||||||||
Sbjct: 942 tcgtcgatggggtcctgggg 923
to top
>dbj|AK074359.1| Homo sapiens cDNA FLJ23779 fis, clone HEP20815, highly similar to
           Homo sapiens PI-3-kinase-related kinase SMG-1 mRNA
          Length = 2034

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 386 ctggactctcttcacctcat 405
           ||||||||||||||||||||
Sbjct: 818 ctggactctcttcacctcat 799
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     tggggcgcgctctgcaaggt 136
               ||||||||||||||||||||
Sbjct: 1811623 tggggcgcgctctgcaaggt 1811604
to top
>emb|Y12244.1|GGCRABPI3 Gallus gallus CRABP-I gene, exon 3
          Length = 442

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 513 ttgtctctctgcttcatgct 532
           ||||||||||||||||||||
Sbjct: 52  ttgtctctctgcttcatgct 71
to top
>emb|CT030697.6| Mouse DNA sequence from clone RP23-274A4 on chromosome 12, complete
              sequence
          Length = 198527

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 516    tctctctgcttcatgctctg 535
              ||||||||||||||||||||
Sbjct: 142698 tctctctgcttcatgctctg 142679
to top
>emb|AL606919.12| Mouse DNA sequence from clone RP23-264F10 on chromosome 4, complete
             sequence
          Length = 187816

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tgtctctctgcttcatgctc 533
             ||||||||||||||||||||
Sbjct: 72487 tgtctctctgcttcatgctc 72468
to top
>dbj|AB061371.1| Homo sapiens smg-1 mRNA for phosphatidylinositol 3-kinase-related
            protein kinase, complete cds
          Length = 13110

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ctggactctcttcacctcat 405
            ||||||||||||||||||||
Sbjct: 6291 ctggactctcttcacctcat 6272
to top
>dbj|AB007881.2| Homo sapiens KIAA0421 mRNA, partial cds
          Length = 7775

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 386 ctggactctcttcacctcat 405
           ||||||||||||||||||||
Sbjct: 957 ctggactctcttcacctcat 938
to top
>dbj|AK074093.1| Homo sapiens mRNA for FLJ00164 protein
          Length = 5829

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 234 tcgtcgatggggtcctgggg 253
           ||||||||||||||||||||
Sbjct: 904 tcgtcgatggggtcctgggg 885


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,639,459
Number of Sequences: 3902068
Number of extensions: 4639459
Number of successful extensions: 82417
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82247
Number of HSP's gapped (non-prelim): 169
length of query: 593
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 570
effective length of database: 17,143,297,704
effective search space: 9771679691280
effective search space used: 9771679691280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top