>YB79_YEAST (P38138) Putative family 31 glucosidase in FAT2-PBP2 intergenic|
           region (EC 3.2.1.-)
          Length = 954

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 73  IYLECAYMLIKKYFTWTTHYYPDTLRL 153
           I+L+  Y   KKYFTW  H +P+  RL
Sbjct: 422 IWLDLEYTNDKKYFTWKQHSFPNPKRL 448

>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC|
            2.7.11.1)
          Length = 1309

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/44 (50%), Positives = 25/44 (56%)
 Frame = +1

Query: 427  QSSSEALHTVPLSSSLHL*WNPWPRTAAPRPSPTGPARSPAPRV 558
            +S S  LH   LSSS  L  +P   T +  PSPT P RSPAP V
Sbjct: 1090 RSFSSGLHH-SLSSSESLPGSP---THSLSPSPTTPCRSPAPDV 1129

>CALCA_CHICK (P10286) Calcitonin gene-related peptide precursor (CGRP)|
          Length = 125

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 28/90 (31%), Positives = 33/90 (36%)
 Frame = -3

Query: 490 DSIKDEGRMTREQYAALRRKIGGTYKDFFKSXXXXXXXXXXXXXXDKTCKVCKKDTRGEP 311
           +SI D  R+T   Y A RR +    KDF +                   + C   T    
Sbjct: 33  ESITD--RVTLSDYEA-RRLLNALVKDFIQMTAEELEQASEGNSVTAQKRACNTATCVTH 89

Query: 310 RQVDNLGRYMHVACAENSKPTNFFSKLFGR 221
           R  D L R   V    N  PTN  SK FGR
Sbjct: 90  RLADFLSRSGGVG-KNNFVPTNVGSKAFGR 118

>RLUD_YERPE (Q8ZBV7) Ribosomal large subunit pseudouridine synthase D (EC|
           5.4.99.-) (rRNA-uridine isomerase D) (rRNA
           pseudouridylate synthase D)
          Length = 325

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 127 HYYPDTLRLQHASIYLTMSRTTSGLMVQKKFI 222
           HYYP+ + +  A I   + + T+GLMV  K +
Sbjct: 121 HYYPEIMDVPRAGIVHRLDKDTTGLMVVAKTV 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,771,020
Number of Sequences: 219361
Number of extensions: 1661222
Number of successful extensions: 5427
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5402
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)