>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -2

Query: 60  GKGAQQGTLPVPEGCXDXNA 1
           GKGAQQGTLPVPEGC D NA
Sbjct: 427 GKGAQQGTLPVPEGCTDQNA 446

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -2

Query: 60  GKGAQQGTLPVPEGCXD 10
           GKGAQQ  LPVPEGC D
Sbjct: 437 GKGAQQVNLPVPEGCTD 453

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 60  GKGAQQGTLPVPEGCXDXNA 1
           GK AQQ +LPV +GC D  A
Sbjct: 435 GKAAQQVSLPVAQGCTDPEA 454

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -2

Query: 60  GKGAQQ-GTLPVPEGCXDXNA 1
           G+ AQQ G +PVPEGC D  A
Sbjct: 438 GQAAQQVGNVPVPEGCTDPQA 458


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,677,551
Number of Sequences: 219361
Number of extensions: 139918
Number of successful extensions: 430
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 80,573,946
effective HSP length: 14
effective length of database: 77,502,892
effective search space used: 1860069408
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)