ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2p17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL355482.13| Human DNA sequence from clone RP11-538D16 on ch... 52 0.002
2gb|BT017400.1| Zea mays clone EL01N0328H09.c mRNA sequence 44 0.57
3ref|XM_483120.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.3
4ref|XM_475915.1| Oryza sativa (japonica cultivar-group), predic... 42 2.3
5gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
6gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, com... 42 2.3
7emb|AL390209.1| Human DNA sequence from clone CTA-437G10 on chro... 42 2.3
8emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ... 42 2.3
9emb|BX640423.1| Bordetella parapertussis strain 12822, complete ... 42 2.3
10emb|BX640422.1| Bordetella pertussis strain Tohama I, complete g... 42 2.3
11gb|AC117416.8| Homo sapiens 3 BAC RP11-26P16 (Roswell Park Cance... 42 2.3
12dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 2.3
13dbj|AK165048.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 42 2.3
14gb|AC004032.7| Homo sapiens Chromosome 22q11.2 BAC Clone b437g10... 42 2.3
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
17dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.3
18dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
19dbj|AK070754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
20gb|L47235.1|MUSXPDG1 Mus musculus ERCC2 gene, genomic sequence 42 2.3
21gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, com... 40 9.0
22gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
23gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.0
25gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.0
26emb|BX005422.5| Human DNA sequence from clone DASS-32K24 on chro... 40 9.0
27emb|AL805913.4| Human DNA sequence from clone DAQB-22D21 on chro... 40 9.0
28emb|AL662824.9| Human DNA sequence from clone XXbac-22I16 on chr... 40 9.0
29emb|AL645931.7| Human DNA sequence from clone XXbac-138A21 on ch... 40 9.0
30ref|XM_500189.1| Yarrowia lipolytica CLIB122, YALI0A18139g.1 pre... 40 9.0
31gb|AC134517.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
32emb|AL158066.12| Human DNA sequence from clone RP11-64P12 on chr... 40 9.0
33emb|AL137798.8| Human DNA sequence from clone RP5-1182A14 on chr... 40 9.0
34emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379... 40 9.0
35emb|AL021920.1|HS163M9 Human DNA sequence from clone RP1-163M9 o... 40 9.0
36emb|Z81310.1|HSO19A Human DNA sequence from clone XX-O19A on chr... 40 9.0
37emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 40 9.0
38emb|BX640436.1| Bordetella parapertussis strain 12822, complete ... 40 9.0
39emb|CR759795.4| Human DNA sequence from clone DAMC-206D4 on chro... 40 9.0
40emb|CR759829.6| Human DNA sequence from clone DADB-17J1 on chrom... 40 9.0
41emb|CR759904.5| Human DNA sequence from clone DAAP-277G18 on chr... 40 9.0
42gb|AC005908.1| Homo sapiens 12p13.3 BAC RPCI11-476M19 (Roswell P... 40 9.0
43dbj|AK125333.1| Homo sapiens cDNA FLJ43343 fis, clone NT2RI3008055 40 9.0
44gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0... 40 9.0
45gb|AC090482.3| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.0
46gb|CP000249.1| Frankia sp. CcI3, complete genome 40 9.0
47gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
48gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 9.0
49gb|AC148676.1| Macaca mulatta Major Histocompatibility Complex B... 40 9.0
50gb|AC148668.1| Macaca mulatta Major Histocompatibility Complex B... 40 9.0
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
52dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
53dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
54dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
55dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
56emb|AL731578.2|OSJN00229 Oryza sativa genomic DNA, chromosome 4,... 40 9.0
57gb|AC122441.6| Mus musculus BAC clone RP24-225A21 from chromosom... 40 9.0
58dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
59gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 9.0
60gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 9.0
61gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
62gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
63gb|AC127366.4| Mus musculus BAC clone RP23-10E9 from 8, complete... 40 9.0
64emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 9.0 
>emb|AL355482.13| Human DNA sequence from clone RP11-538D16 on chromosome 1q25.1-31.3
             Contains the gene for a protein similar to zinc finger
             protein 135 (clone pHZ-17) zinc finger protein 61
             (LOC127665) and two novel genes (LOC149157), complete
             sequence
          Length = 74515

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 501   aggcctcaatgtcacgaaggactcct 526
             ||||||||||||||||||||||||||
Sbjct: 35875 aggcctcaatgtcacgaaggactcct 35850
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>gb|BT017400.1| Zea mays clone EL01N0328H09.c mRNA sequence
          Length = 1152

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 425 tcaccaggcacaccttcttctccacctccg 454
           ||||||| | ||||||||||||||||||||
Sbjct: 813 tcaccagcctcaccttcttctccacctccg 784
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>ref|XM_483120.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 417

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 342 ctcgagcatccacacgtccatcctc 366
           |||||||| ||||||||||||||||
Sbjct: 176 ctcgagcacccacacgtccatcctc 200
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>ref|XM_475915.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1563

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 acgcaccgcggcgccgacgac 294
           |||||||||||||||||||||
Sbjct: 964 acgcaccgcggcgccgacgac 984
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>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
             complete sequence
          Length = 119500

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   acgcaccgcggcgccgacgac 294
             |||||||||||||||||||||
Sbjct: 40632 acgcaccgcggcgccgacgac 40612
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>gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, complete sequence
          Length = 196427

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    agcctggtggagggagaggcc 55
             |||||||||||||||||||||
Sbjct: 64406 agcctggtggagggagaggcc 64426
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>emb|AL390209.1| Human DNA sequence from clone CTA-437G10 on chromosome 22q11.2-12.3,
             complete sequence
          Length = 71200

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 433   cacaccttcttctccacctcc 453
             |||||||||||||||||||||
Sbjct: 21605 cacaccttcttctccacctcc 21585
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>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 216   gtcgccgtcgcggccgtgcagcagg 240
             |||| ||||||||||||||||||||
Sbjct: 92992 gtcgacgtcgcggccgtgcagcagg 92968
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>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 216   gtcgccgtcgcggccgtgcagcagg 240
             |||| ||||||||||||||||||||
Sbjct: 94188 gtcgacgtcgcggccgtgcagcagg 94164
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>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12
          Length = 257701

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 216   gtcgccgtcgcggccgtgcagcagg 240
             |||| ||||||||||||||||||||
Sbjct: 60466 gtcgacgtcgcggccgtgcagcagg 60442
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>gb|AC117416.8| Homo sapiens 3 BAC RP11-26P16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 129306

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 622   ttcaccaggcagctctccctc 642
             |||||||||||||||||||||
Sbjct: 55821 ttcaccaggcagctctccctc 55801
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 497    gcggaggcctcaatgtcacga 517
              |||||||||||||||||||||
Sbjct: 266509 gcggaggcctcaatgtcacga 266529
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>dbj|AK165048.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130320P15 product:excision repair
            cross-complementing rodent repair deficiency,
            complementation group 2, full insert sequence
          Length = 5751

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 35   agcctggtggagggagaggcc 55
            |||||||||||||||||||||
Sbjct: 3142 agcctggtggagggagaggcc 3122
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>gb|AC004032.7| Homo sapiens Chromosome 22q11.2 BAC Clone b437g10 In BCRL2-GGT Region,
             complete sequence
          Length = 200685

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 433   cacaccttcttctccacctcc 453
             |||||||||||||||||||||
Sbjct: 21599 cacaccttcttctccacctcc 21579
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 342      ctcgagcatccacacgtccatcctc 366
                |||||||| ||||||||||||||||
Sbjct: 24365589 ctcgagcacccacacgtccatcctc 24365565
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 274      acgcaccgcggcgccgacgac 294
                |||||||||||||||||||||
Sbjct: 28405708 acgcaccgcggcgccgacgac 28405688



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 175      tccccgccgtcctcgtcgcc 194
                ||||||||||||||||||||
Sbjct: 21893138 tccccgccgtcctcgtcgcc 21893119
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 218     cgccgtcgcggccgtgcagca 238
               |||||||||||||||||||||
Sbjct: 4207171 cgccgtcgcggccgtgcagca 4207191
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>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0686H11
          Length = 135273

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 342    ctcgagcatccacacgtccatcctc 366
              |||||||| ||||||||||||||||
Sbjct: 105893 ctcgagcacccacacgtccatcctc 105869
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>dbj|AK070754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067B12, full
            insert sequence
          Length = 2233

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 274  acgcaccgcggcgccgacgac 294
            |||||||||||||||||||||
Sbjct: 1423 acgcaccgcggcgccgacgac 1443
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>gb|L47235.1|MUSXPDG1 Mus musculus ERCC2 gene, genomic sequence
          Length = 32595

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    agcctggtggagggagaggcc 55
             |||||||||||||||||||||
Sbjct: 20474 agcctggtggagggagaggcc 20454
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>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence
          Length = 222682

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    gcctggtggagggagaggccagtg 59
             |||||||||| |||||||||||||
Sbjct: 12171 gcctggtggaaggagaggccagtg 12148
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>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16,
              complete sequence
          Length = 137872

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    tccccgccgtcctcgtcgcc 194
              ||||||||||||||||||||
Sbjct: 119497 tccccgccgtcctcgtcgcc 119516
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>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01,
             complete sequence
          Length = 126532

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   tccccgccgtcctcgtcgcc 194
             ||||||||||||||||||||
Sbjct: 12352 tccccgccgtcctcgtcgcc 12333
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     caccttcttctccacctccg 454
               ||||||||||||||||||||
Sbjct: 5855623 caccttcttctccacctccg 5855642
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>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0021B21, from chromosome 3, complete sequence
          Length = 139208

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   caccttcttctccacctccg 454
             ||||||||||||||||||||
Sbjct: 84453 caccttcttctccacctccg 84472
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>emb|BX005422.5| Human DNA sequence from clone DASS-32K24 on chromosome 6, complete
             sequence
          Length = 97466

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgtgcagcaggaccttctc 248
             ||||||||||||||||||||
Sbjct: 57517 ccgtgcagcaggaccttctc 57536
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>emb|AL805913.4| Human DNA sequence from clone DAQB-22D21 on chromosome 6 Contains the
             3' end of the BRD2 gene for bromodomain containing 2, the
             HLA-DOA gene for the major histocompatibility complex,
             class II, DO alpha, the HLA-DPA1 gene for the major
             histocompatibility complex, class II, DP alpha 1, the
             RPL32P1 pseudogene for ribosomal protein L32 pseudogene 1,
             the 3' end of the HLA-DPB1 gene for the major
             histocompatibility complex, class II, DP beta 1 and 1 CpG
             isalnd, complete sequence
          Length = 106728

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgtgcagcaggaccttctc 248
             ||||||||||||||||||||
Sbjct: 54465 ccgtgcagcaggaccttctc 54484
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>emb|AL662824.9| Human DNA sequence from clone XXbac-22I16 on chromosome 6 contains the
             HLA-DPA1 gene for major histocompatibility complex, class
             II, DP alpha 1, the HLA-DPB1 gene for major
             histocompatibility complex, class II, DP beta 1, a
             ribosomal protein L32 (RPL32) pseudogene, the HLA-DPA2
             pseudogene for major histocompatibility complex, class II,
             DP alpha 2, a pseudogene similar to part of collagens, a
             novel protein similar to major histocompatibility complex,
             class II, DP beta 2 (pseudogene), a major
             histocompatibility complex, class II, DP beta 1
             pseudogene, two putative novel transcripts, the COL11A2
             gene for collagen, type XI, alpha 2, the RXRB gene for
             retinoid X receptor, beta, the HKE4 gene for HLA-class II
             region expressed gene KE4, the 5' end of the HSD17B8 gene
             for hydroxysteroid (17-beta) dehydrogenase 8 and four CpG
             islands, complete sequence
          Length = 187964

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgtgcagcaggaccttctc 248
             ||||||||||||||||||||
Sbjct: 11849 ccgtgcagcaggaccttctc 11868
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>emb|AL645931.7| Human DNA sequence from clone XXbac-138A21 on chromosome 6 Contains the
             HLA-DOA, HLA-DPA1 and HLA-DPB1 genes for major
             histocompatibility complex class II proteins DO alpha, DP
             alpha 1 and DP beta 1, the HLA-DPA2 major
             histocompatibility complex class II DP alpha 2 pseudogene,
             ribosomal protein L32 pseudogene RPL32P1, a pseudogene
             similar to part of collagens, the 5' end of an HLA class
             II histocompatibility antigen D or S beta pseudogene, the
             5' end of a novel protein similar to major
             histocompatibility complex class II DP beta 1 precursor
             and a CpG island, complete sequence
          Length = 124899

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgtgcagcaggaccttctc 248
             ||||||||||||||||||||
Sbjct: 37491 ccgtgcagcaggaccttctc 37510
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>ref|XM_500189.1| Yarrowia lipolytica CLIB122, YALI0A18139g.1 predicted mRNA
          Length = 2349

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 434  acaccttcttctccacctcc 453
            ||||||||||||||||||||
Sbjct: 1834 acaccttcttctccacctcc 1815
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>gb|AC134517.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1325D05,
              complete sequence
          Length = 136214

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    ccttcttctccacctccgtc 456
              ||||||||||||||||||||
Sbjct: 108239 ccttcttctccacctccgtc 108220
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>emb|AL158066.12| Human DNA sequence from clone RP11-64P12 on chromosome 13q14.2-21.2
              Contains part of a novel gene, a mitochondrial ribosomal
              protein S31 (MRPS31) pseudogene and two CpG islands,
              complete sequence
          Length = 138201

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    ggcctcaagttcagcagctt 170
              ||||||||||||||||||||
Sbjct: 106637 ggcctcaagttcagcagctt 106618
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>emb|AL137798.8| Human DNA sequence from clone RP5-1182A14 on chromosome 1 Contains the
             5' end of a novel gene, a novel gene, a macrophage
             stimulating 1 (hepatocyte growth factor-like)(MST1)
             pseudogene and three CpG islands, complete sequence
          Length = 146141

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   ggacagcgcgggggcgccgc 484
             ||||||||||||||||||||
Sbjct: 18776 ggacagcgcgggggcgccgc 18757
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>emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379J5 on chromosome 20 Contains the 3'
              end of the SEC23B gene for Sec23 (S. cerevisiae) homolog B,
              two novel genes, the 5' end of the HARS2 gene for
              histidyl-tRNA synthetase 2, a pseudogene similar to part of
              homeobox proteins and two CpG islands, complete sequence
          Length = 149933

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    taaggcctcaagttcagcag 167
              ||||||||||||||||||||
Sbjct: 109224 taaggcctcaagttcagcag 109205
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>emb|AL021920.1|HS163M9 Human DNA sequence from clone RP1-163M9 on chromosome 1p35.1-36.21
             Contains a novel pseudogene, a eukaryotic translation
             initiation factor 1A pseudogene 1 (EIF1AP1), part of a
             novel gene (LOC284729), a macrophage stimulating 1
             (hepatocyte growth factor-like)(MST1) pseudogene and five
             CpG islands, complete sequence
          Length = 118067

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   ggacagcgcgggggcgccgc 484
             ||||||||||||||||||||
Sbjct: 12391 ggacagcgcgggggcgccgc 12410
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>emb|Z81310.1|HSO19A Human DNA sequence from clone XX-O19A on chromosome 6. Contains the
             HLA-DNA gene for major histocompatibility complex class II
             DN alpha, ESTs, STSs and GSSs, complete sequence
          Length = 38772

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   ccgtgcagcaggaccttctc 248
             ||||||||||||||||||||
Sbjct: 14011 ccgtgcagcaggaccttctc 13992
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>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    gcggcgccgacgacgacagc 300
              ||||||||||||||||||||
Sbjct: 325642 gcggcgccgacgacgacagc 325623
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>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14
          Length = 255260

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    gcggcgccgacgacgacagc 300
              ||||||||||||||||||||
Sbjct: 118019 gcggcgccgacgacgacagc 118000
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>emb|CR759795.4| Human DNA sequence from clone DAMC-206D4 on chromosome 6, complete
             sequence
          Length = 119898

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgtgcagcaggaccttctc 248
             ||||||||||||||||||||
Sbjct: 31921 ccgtgcagcaggaccttctc 31940
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>emb|CR759829.6| Human DNA sequence from clone DADB-17J1 on chromosome 6, complete
             sequence
          Length = 93292

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgtgcagcaggaccttctc 248
             ||||||||||||||||||||
Sbjct: 51735 ccgtgcagcaggaccttctc 51754
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>emb|CR759904.5| Human DNA sequence from clone DAAP-277G18 on chromosome 6, complete
             sequence
          Length = 86480

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgtgcagcaggaccttctc 248
             ||||||||||||||||||||
Sbjct: 10183 ccgtgcagcaggaccttctc 10202
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>gb|AC005908.1| Homo sapiens 12p13.3 BAC RPCI11-476M19 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 196501

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   cgttgctgctgaaaggggcg 423
             ||||||||||||||||||||
Sbjct: 62598 cgttgctgctgaaaggggcg 62617
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>dbj|AK125333.1| Homo sapiens cDNA FLJ43343 fis, clone NT2RI3008055
          Length = 5978

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 404  cgttgctgctgaaaggggcg 423
            ||||||||||||||||||||
Sbjct: 2387 cgttgctgctgaaaggggcg 2406
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>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic
             sequence, complete sequence
          Length = 147289

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   tccccgccgtcctcgtcgcc 194
             ||||||||||||||||||||
Sbjct: 96127 tccccgccgtcctcgtcgcc 96108
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>gb|AC090482.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0015I18, from chromosome 10, complete sequence
          Length = 161479

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    ccttcttctccacctccgtc 456
              ||||||||||||||||||||
Sbjct: 129455 ccttcttctccacctccgtc 129474
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 174     ctccccgccgtcctcgtcgccccg 197
               |||| |||||||||||||||||||
Sbjct: 1456456 ctccacgccgtcctcgtcgccccg 1456433
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>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0085F02, complete sequence
          Length = 128535

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  caccttcttctccacctccg 454
            ||||||||||||||||||||
Sbjct: 5245 caccttcttctccacctccg 5264
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 156     caagttcagcagcttcacct 175
               ||||||||||||||||||||
Sbjct: 2490355 caagttcagcagcttcacct 2490336
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>gb|AC148676.1| Macaca mulatta Major Histocompatibility Complex BAC MMU118H05, complete
             sequence
          Length = 155090

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgtgcagcaggaccttctc 248
             ||||||||||||||||||||
Sbjct: 83992 ccgtgcagcaggaccttctc 84011
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>gb|AC148668.1| Macaca mulatta Major Histocompatibility Complex BAC MMU038L02, complete
              sequence
          Length = 168263

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    ccgtgcagcaggaccttctc 248
              ||||||||||||||||||||
Sbjct: 118079 ccgtgcagcaggaccttctc 118098
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 142      tacctgtaaggcctcaagtt 161
                ||||||||||||||||||||
Sbjct: 10306927 tacctgtaaggcctcaagtt 10306908
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     tccccgccgtcctcgtcgcc 194
               ||||||||||||||||||||
Sbjct: 6448103 tccccgccgtcctcgtcgcc 6448122
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 437     ccttcttctccacctccgtc 456
               ||||||||||||||||||||
Sbjct: 9236962 ccttcttctccacctccgtc 9236943
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 142      tacctgtaaggcctcaagtt 161
                ||||||||||||||||||||
Sbjct: 19938441 tacctgtaaggcctcaagtt 19938422
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     caccttcttctccacctccg 454
               ||||||||||||||||||||
Sbjct: 5854836 caccttcttctccacctccg 5854855
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>emb|AL731578.2|OSJN00229 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017P10,
              complete sequence
          Length = 175563

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    tacctgtaaggcctcaagtt 161
              ||||||||||||||||||||
Sbjct: 131142 tacctgtaaggcctcaagtt 131123
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>gb|AC122441.6| Mus musculus BAC clone RP24-225A21 from chromosome 8, complete sequence
          Length = 177689

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      accacactgcaaagccctac 28
              ||||||||||||||||||||
Sbjct: 139509 accacactgcaaagccctac 139490
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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0036M16
          Length = 158880

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    tacctgtaaggcctcaagtt 161
              ||||||||||||||||||||
Sbjct: 103091 tacctgtaaggcctcaagtt 103072
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 182     cgtcctcgtcgccccgcaggtcccggcagaac 213
               |||||||||||||| |||||||| ||| ||||
Sbjct: 2371249 cgtcctcgtcgcccagcaggtccgggccgaac 2371218
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    cgccgtcctcgtcgccccgc 198
              ||||||||||||||||||||
Sbjct: 903133 cgccgtcctcgtcgccccgc 903114
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 437     ccttcttctccacctccgtc 456
               ||||||||||||||||||||
Sbjct: 9242101 ccttcttctccacctccgtc 9242082
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     tccccgccgtcctcgtcgcc 194
               ||||||||||||||||||||
Sbjct: 6514570 tccccgccgtcctcgtcgcc 6514589
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>gb|AC127366.4| Mus musculus BAC clone RP23-10E9 from 8, complete sequence
          Length = 177375

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    gcctggtggagggagaggccagtg 59
             |||||||||| |||||||||||||
Sbjct: 56346 gcctggtggaaggagaggccagtg 56323
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 434     acaccttcttctccacctcc 453
               ||||||||||||||||||||
Sbjct: 1885140 acaccttcttctccacctcc 1885159


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,202,615
Number of Sequences: 3902068
Number of extensions: 4202615
Number of successful extensions: 91660
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89987
Number of HSP's gapped (non-prelim): 1673
length of query: 656
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 633
effective length of database: 17,143,297,704
effective search space: 10851707446632
effective search space used: 10851707446632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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