ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3e23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193394.1| Oryza sativa (japonica cultivar-group), predic... 161 3e-36
2dbj|AK066233.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
3dbj|AK062019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
4gb|AY106213.1| Zea mays PCO107956 mRNA sequence 145 2e-31
5gb|BT017041.1| Zea mays clone EL01N0202G12.c mRNA sequence 137 4e-29
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
7dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
8dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
9ref|XM_453127.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D01309g ... 50 0.008
10emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 50 0.008
11ref|NM_102836.2| Arabidopsis thaliana transcription factor AT1G3... 44 0.50
12gb|AF360277.1| Arabidopsis thaliana putative zinc finger protein... 44 0.50
13emb|BX323041.9| Zebrafish DNA sequence from clone RP71-82P7 in l... 44 0.50
14gb|AY039540.1| Arabidopsis thaliana At1g30970/F17F8_14 mRNA, com... 44 0.50
15emb|BX816406.1|CNS0ADCC Arabidopsis thaliana Full-length cDNA Co... 44 0.50
16gb|AY085612.1| Arabidopsis thaliana clone 16162 mRNA, complete s... 44 0.50
17gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana... 44 0.50
18emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in... 44 0.50
19gb|AC121136.11| Mus musculus chromosome 8, clone RP23-339I14, co... 42 2.0
20gb|AC161435.7| Mus musculus chromosome 8, clone RP23-78L21, comp... 42 2.0
21gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, com... 42 2.0
22gb|AC120147.8| Mus musculus chromosome 19, clone RP24-223N20, co... 42 2.0
23emb|AL512286.6| Human DNA sequence from clone RP11-45J1 on chrom... 42 2.0
24gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, compl... 42 2.0
25gb|AC162456.3| Mus musculus chromosome 19, clone RP23-406F15, co... 42 2.0
26gb|AY136819.1| Bos taurus clone pBLS1 Bov-B LINE/BovB repeat seq... 42 2.0
27gb|AC092916.6| Homo sapiens 3 BAC RP11-615J4 (Roswell Park Cance... 42 2.0
28dbj|AK095052.1| Homo sapiens cDNA FLJ37733 fis, clone BRHIP2020827 42 2.0
29dbj|AK094349.1| Homo sapiens cDNA FLJ37030 fis, clone BRACE2011183 42 2.0
30gb|AC020642.7| Homo sapiens chromosome 10 clone RP11-275D14, com... 42 2.0
31gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Can... 42 2.0
32gb|AC156614.7| Mus musculus chromosome 8, clone RP23-257H17, com... 42 2.0
33gb|AC157914.4| Mus musculus chromosome 19, clone RP24-284E14, co... 42 2.0
34gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.67... 42 2.0
35gb|AF040974.1|AF040974 Plasmodium vivax small subunit ribosomal ... 42 2.0
36dbj|AP006258.1| Homo sapiens genomic DNA, chromosome 11, clone:R... 42 2.0
37dbj|AP005639.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.0
38dbj|AP005134.3| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 2.0
39emb|AL607087.10| Mouse DNA sequence from clone RP23-18M1 on chro... 42 2.0
40gb|AC167172.3| Mus musculus BAC clone RP23-166M7 from chromosome... 40 7.7
41gb|U88174.1| Caenorhabditis elegans cosmid M01A10, complete sequ... 40 7.7
42ref|NM_025813.1| Mus musculus major facilitator superfamily doma... 40 7.7
43gb|AC139885.3| Mus musculus BAC clone RP23-349N15 from chromosom... 40 7.7
44gb|BT013530.1| Lycopersicon esculentum clone 132248F, mRNA sequence 40 7.7
45gb|AC124724.4| Mus musculus BAC clone RP23-446L16 from chromosom... 40 7.7
46emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in l... 40 7.7
47emb|AL359995.13| Human DNA sequence from clone RP13-209A14 on ch... 40 7.7
48gb|AC120049.5| Homo sapiens chromosome 18, clone RP11-456K23, co... 40 7.7
49gb|AC090133.6| Homo sapiens chromosome 8, clone RP11-813L8, comp... 40 7.7
50emb|AL645967.20| Mouse DNA sequence from clone RP23-82J18 on chr... 40 7.7
51emb|BX640406.9| Zebrafish DNA sequence from clone DKEY-187A3 in ... 40 7.7
52gb|AC011146.10| Homo sapiens chromosome 8, clone RP11-2F15, comp... 40 7.7
53gb|AC025089.9| Homo sapiens chromosome 8, clone RP11-275B19, com... 40 7.7
54gb|AC107988.4| Homo sapiens chromosome 18, clone CTC-346I21, com... 40 7.7
55dbj|AK136108.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 7.7
56gb|AC105245.4| Homo sapiens chromosome 18, clone CTD-2515C13, co... 40 7.7
57dbj|AK135235.1| Mus musculus 12 days embryo male wolffian duct i... 40 7.7
58gb|AC074237.4| Homo sapiens chromosome 18, clone RP11-333K18, co... 40 7.7
59dbj|AK152444.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 7.7
60dbj|AK166645.1| Mus musculus morula whole body morula cDNA, RIKE... 40 7.7
61gb|AF165818.4|AF165818 Guillardia theta nucleomorph chromosome 1... 40 7.7
62dbj|AK159554.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 7.7
63emb|BX296542.12| Zebrafish DNA sequence from clone CH211-278C10 ... 40 7.7
64gb|AC021766.6| Homo sapiens, clone RP11-9H20, complete sequence 40 7.7
65gb|AC090657.40| Mus musculus strain C57BL/6J clone rp23-410i12 m... 40 7.7
66dbj|AK032688.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 7.7
67dbj|AK075859.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 7.7
68dbj|AK004586.1| Mus musculus adult male lung cDNA, RIKEN full-le... 40 7.7
69gb|AC069130.6|AC069130 Homo sapiens BAC clone RP11-468D10 from Y... 40 7.7
70dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
71dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
72gb|AC140847.4| Homo sapiens 12 BAC RP11-313F23 (Roswell Park Can... 40 7.7
73gb|U49831.1| Caenorhabditis elegans cosmid F10C1, complete sequence 40 7.7
74gb|AF188029.5| Homo sapiens chromosome 8 clone GS1-56L10 map p22... 40 7.7
75gb|AC012355.10| Homo sapiens BAC clone RP11-239I4 from 2, comple... 40 7.7
76gb|AC015978.4|AC015978 Homo sapiens BAC clone RP11-529I21 from Y... 40 7.7
77dbj|AK208838.1| Mus musculus cDNA, clone:Y2G0112O17, strand:plus... 40 7.7
78dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
79gb|AY603631.1| Culicoides sonorensis clone Cssg00671A unknown sa... 40 7.7
80dbj|AK101128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
81ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5... 40 7.7
82gb|BC024891.1| Mus musculus major facilitator superfamily domain... 40 7.7
83gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 7.7
84gb|AC110174.10| Mus musculus chromosome 3, clone RP23-293K21, co... 40 7.7
85gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
86emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial se... 40 7.7
87emb|CT030639.8| Mouse DNA sequence from clone RP24-318P17 on chr... 40 7.7
88gb|AC135635.5| Mus musculus BAC clone RP23-245M20 from 3, comple... 40 7.7
89emb|AL627123.13| Mouse DNA sequence from clone RP23-351I23 on ch... 40 7.7
90emb|AL606928.9| Mouse DNA sequence from clone RP23-154F2 on chro... 40 7.7
91dbj|AB025906.1| Cucumis melo CMe-ACS1 gene for 1-aminocyclopropa... 40 7.7
92dbj|AB032935.1| Cucumis melo CMe-ACS1 gene for 1-aminocyclopropa... 40 7.7 
>ref|NM_193394.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1512

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                        
Query: 258  agataacacgagctttataaaggcagatataagccatgtgccagtcgcctccaccagata 317
            |||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct: 1510 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcctccaccagata 1451

                                                                        
Query: 318  atttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatcaaactcaatccatt 377
            | || ||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 1450 actttaaaatctcttcctccttgcgtatgctagggttgtcatcatcaaattcaatccatt 1391

             
Query: 378  t 378
            |
Sbjct: 1390 t 1390



 Score =  101 bits (51), Expect = 2e-18
 Identities = 87/99 (87%)
 Strand = Plus / Minus

                                                                        
Query: 461  tcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtc 520
            ||||||||||||||||||||||| || || || || ||||||||||| || ||||| |||
Sbjct: 1385 tcatcttgcttaacccagccaacataatggcctgagtctgcacttctccctttgtgcgtc 1326

                                                   
Query: 521  aagacagcaattaaatcatagatcccagttaattgtttc 559
            || |||||||||||||||||||| ||||| || ||||||
Sbjct: 1325 aaaacagcaattaaatcatagatgccagtcaaatgtttc 1287
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>dbj|AK066233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056M18, full
            insert sequence
          Length = 1835

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                        
Query: 258  agataacacgagctttataaaggcagatataagccatgtgccagtcgcctccaccagata 317
            |||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct: 1553 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcctccaccagata 1494

                                                                        
Query: 318  atttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatcaaactcaatccatt 377
            | || ||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 1493 actttaaaatctcttcctccttgcgtatgctagggttgtcatcatcaaattcaatccatt 1434

             
Query: 378  t 378
            |
Sbjct: 1433 t 1433



 Score =  123 bits (62), Expect = 7e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                        
Query: 461  tcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtc 520
            ||||||||||||||||||||||| || || || || ||||||||||| || ||||| |||
Sbjct: 1428 tcatcttgcttaacccagccaacataatggcctgagtctgcacttctccctttgtgcgtc 1369

                                                              
Query: 521  aagacagcaattaaatcatagatcccagttaattgtttctttggcacaga 570
            || |||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 1368 aaaacagcaattaaatcatagatgccagtcaaatgtttctttggcacaga 1319



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 125  cagtttgaaccaaactggaaaa 146
            ||||||||||||||||||||||
Sbjct: 1678 cagtttgaaccaaactggaaaa 1657
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>dbj|AK062019.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F09, full
            insert sequence
          Length = 1629

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                        
Query: 258  agataacacgagctttataaaggcagatataagccatgtgccagtcgcctccaccagata 317
            |||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct: 1480 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcctccaccagata 1421

                                                                        
Query: 318  atttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatcaaactcaatccatt 377
            | || ||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 1420 actttaaaatctcttcctccttgcgtatgctagggttgtcatcatcaaattcaatccatt 1361

             
Query: 378  t 378
            |
Sbjct: 1360 t 1360



 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                        
Query: 461  tcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtc 520
            ||||| ||||||||||||||||| || || || || ||||||||||| || ||||| |||
Sbjct: 1355 tcatcatgcttaacccagccaacataatggcctgagtctgcacttctccctttgtgcgtc 1296

                                                              
Query: 521  aagacagcaattaaatcatagatcccagttaattgtttctttggcacaga 570
            || |||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 1295 aaaacagcaattaaatcatagatgccagtcaaatgtttctttggcacaga 1246



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 125  cagtttgaaccaaactggaaaa 146
            ||||||||||||||||||||||
Sbjct: 1605 cagtttgaaccaaactggaaaa 1584
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>gb|AY106213.1| Zea mays PCO107956 mRNA sequence
          Length = 1770

 Score =  145 bits (73), Expect = 2e-31
 Identities = 103/113 (91%)
 Strand = Plus / Minus

                                                                        
Query: 269  gctttataaaggcagatataagccatgtgccagtcgcctccaccagataatttcaaaatc 328
            ||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||| 
Sbjct: 1472 gctttgtataggcagatataagccatgtgccagtcacctccaccagatagtttcaaaatg 1413

                                                                 
Query: 329  tcttcctcctttcgtatgcttgggttgtcgtcatcaaactcaatccattttcc 381
            ||||||||||| || ||| |||||||||| ||||||||||| |||||||||||
Sbjct: 1412 tcttcctccttgcggatgtttgggttgtcatcatcaaactcgatccattttcc 1360



 Score =  143 bits (72), Expect = 7e-31
 Identities = 96/104 (92%)
 Strand = Plus / Minus

                                                                        
Query: 461  tcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtc 520
            ||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 1358 tcatcttgctttacccagccaacatagtggccagagtctgcacttcttcccttgtgtgtc 1299

                                                        
Query: 521  aagacagcaattaaatcatagatcccagttaattgtttctttgg 564
            ||||||||||  ||||||||||  ||||||||||||||||||||
Sbjct: 1298 aagacagcaaccaaatcatagacgccagttaattgtttctttgg 1255
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>gb|BT017041.1| Zea mays clone EL01N0202G12.c mRNA sequence
          Length = 592

 Score =  137 bits (69), Expect = 4e-29
 Identities = 102/113 (90%)
 Strand = Plus / Minus

                                                                       
Query: 269 gctttataaaggcagatataagccatgtgccagtcgcctccaccagataatttcaaaatc 328
           ||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||| 
Sbjct: 133 gctttgtataggcagatataagccatgtgccagtcacctccaccagatagtttcaaaatg 74

                                                                
Query: 329 tcttcctcctttcgtatgcttgggttgtcgtcatcaaactcaatccattttcc 381
           ||||||||||| || ||| |||| ||||| ||||||||||| |||||||||||
Sbjct: 73  tcttcctccttgcggatgtttggattgtcatcatcaaactcgatccattttcc 21
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  123 bits (62), Expect = 7e-25
 Identities = 98/110 (89%)
 Strand = Plus / Plus

                                                                            
Query: 461      tcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtc 520
                ||||||||||||||||||||||| || || || || ||||||||||| || ||||| |||
Sbjct: 20578319 tcatcttgcttaacccagccaacataatggcctgagtctgcacttctccctttgtgcgtc 20578378

                                                                  
Query: 521      aagacagcaattaaatcatagatcccagttaattgtttctttggcacaga 570
                || |||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 20578379 aaaacagcaattaaatcatagatgccagtcaaatgtttctttggcacaga 20578428



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                            
Query: 305      cctccaccagataatttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatca 364
                |||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 20578161 cctccaccagataactttaaaatctcttcctccttgcgtatgctagggttgtcatcatca 20578220

                              
Query: 365      aactcaatccattt 378
                || |||||||||||
Sbjct: 20578221 aattcaatccattt 20578234



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 258      agataacacgagctttataaaggcagatataagccatgtgccagtcgcct 307
                |||||||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 20578033 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcct 20578082



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 125      cagtttgaaccaaactggaaaa 146
                ||||||||||||||||||||||
Sbjct: 20577908 cagtttgaaccaaactggaaaa 20577929
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>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0024F24
          Length = 172642

 Score =  123 bits (62), Expect = 7e-25
 Identities = 98/110 (89%)
 Strand = Plus / Plus

                                                                         
Query: 461   tcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtc 520
             ||||||||||||||||||||||| || || || || ||||||||||| || ||||| |||
Sbjct: 40295 tcatcttgcttaacccagccaacataatggcctgagtctgcacttctccctttgtgcgtc 40354

                                                               
Query: 521   aagacagcaattaaatcatagatcccagttaattgtttctttggcacaga 570
             || |||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 40355 aaaacagcaattaaatcatagatgccagtcaaatgtttctttggcacaga 40404



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                         
Query: 305   cctccaccagataatttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatca 364
             |||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 40137 cctccaccagataactttaaaatctcttcctccttgcgtatgctagggttgtcatcatca 40196

                           
Query: 365   aactcaatccattt 378
             || |||||||||||
Sbjct: 40197 aattcaatccattt 40210



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 258   agataacacgagctttataaaggcagatataagccatgtgccagtcgcct 307
             |||||||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 40009 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcct 40058



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 125   cagtttgaaccaaactggaaaa 146
             ||||||||||||||||||||||
Sbjct: 39884 cagtttgaaccaaactggaaaa 39905
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>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1156H12
          Length = 159509

 Score =  123 bits (62), Expect = 7e-25
 Identities = 98/110 (89%)
 Strand = Plus / Plus

                                                                          
Query: 461    tcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtc 520
              ||||||||||||||||||||||| || || || || ||||||||||| || ||||| |||
Sbjct: 102141 tcatcttgcttaacccagccaacataatggcctgagtctgcacttctccctttgtgcgtc 102200

                                                                
Query: 521    aagacagcaattaaatcatagatcccagttaattgtttctttggcacaga 570
              || |||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 102201 aaaacagcaattaaatcatagatgccagtcaaatgtttctttggcacaga 102250



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                          
Query: 305    cctccaccagataatttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatca 364
              |||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 101983 cctccaccagataactttaaaatctcttcctccttgcgtatgctagggttgtcatcatca 102042

                            
Query: 365    aactcaatccattt 378
              || |||||||||||
Sbjct: 102043 aattcaatccattt 102056



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                
Query: 258    agataacacgagctttataaaggcagatataagccatgtgccagtcgcct 307
              |||||||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 101855 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcct 101904



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 125    cagtttgaaccaaactggaaaa 146
              ||||||||||||||||||||||
Sbjct: 101730 cagtttgaaccaaactggaaaa 101751
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>ref|XM_453127.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D01309g predicted mRNA
          Length = 2235

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 121 ctcacagtttgaaccaaactggaaa 145
           |||||||||||||||||||||||||
Sbjct: 53  ctcacagtttgaaccaaactggaaa 29
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>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1715506

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 121    ctcacagtttgaaccaaactggaaa 145
              |||||||||||||||||||||||||
Sbjct: 114765 ctcacagtttgaaccaaactggaaa 114741
to top
>ref|NM_102836.2| Arabidopsis thaliana transcription factor AT1G30970 mRNA, complete
           cds
          Length = 1594

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 32  aaatctttctcctatttgttga 53
           ||||||||||||||||||||||
Sbjct: 154 aaatctttctcctatttgttga 133
to top
>gb|AF360277.1| Arabidopsis thaliana putative zinc finger protein (At1g30970) mRNA,
           complete cds
          Length = 1612

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 32  aaatctttctcctatttgttga 53
           ||||||||||||||||||||||
Sbjct: 152 aaatctttctcctatttgttga 131
to top
>emb|BX323041.9| Zebrafish DNA sequence from clone RP71-82P7 in linkage group 7, complete
              sequence
          Length = 146935

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 5      taaatgatgtttaaataaaaaa 26
              ||||||||||||||||||||||
Sbjct: 124203 taaatgatgtttaaataaaaaa 124182
to top
>gb|AY039540.1| Arabidopsis thaliana At1g30970/F17F8_14 mRNA, complete cds
          Length = 1549

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 32  aaatctttctcctatttgttga 53
           ||||||||||||||||||||||
Sbjct: 132 aaatctttctcctatttgttga 111
to top
>emb|BX816406.1|CNS0ADCC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH46ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1503

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 32  aaatctttctcctatttgttga 53
           ||||||||||||||||||||||
Sbjct: 135 aaatctttctcctatttgttga 114
to top
>gb|AY085612.1| Arabidopsis thaliana clone 16162 mRNA, complete sequence
          Length = 1558

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 32  aaatctttctcctatttgttga 53
           ||||||||||||||||||||||
Sbjct: 141 aaatctttctcctatttgttga 120
to top
>gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana BAC F17F8 from chromosome I,
             complete sequence
          Length = 102393

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 32    aaatctttctcctatttgttga 53
             ||||||||||||||||||||||
Sbjct: 45459 aaatctttctcctatttgttga 45438
to top
>emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in linkage group 16,
            complete sequence
          Length = 199070

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 16   taaataaaaaatnaacaaatctttc 40
            |||||||||||| ||||||||||||
Sbjct: 4856 taaataaaaaattaacaaatctttc 4832
to top
>gb|AC121136.11| Mus musculus chromosome 8, clone RP23-339I14, complete sequence
          Length = 202411

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 367    ctcaatccattttcctgaatg 387
              |||||||||||||||||||||
Sbjct: 173641 ctcaatccattttcctgaatg 173621
to top
>gb|AC161435.7| Mus musculus chromosome 8, clone RP23-78L21, complete sequence
          Length = 219937

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    taaataaaaaatnaacaaatcttt 39
             |||||||||||| |||||||||||
Sbjct: 11110 taaataaaaaataaacaaatcttt 11133
to top
>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence
          Length = 210003

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 16     taaataaaaaatnaacaaatcttt 39
              |||||||||||| |||||||||||
Sbjct: 109439 taaataaaaaataaacaaatcttt 109462
to top
>gb|AC120147.8| Mus musculus chromosome 19, clone RP24-223N20, complete sequence
          Length = 172853

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 121    ctcacagtttgaaccaaactggaaa 145
              |||||| ||||||||||||||||||
Sbjct: 143096 ctcacattttgaaccaaactggaaa 143072
to top
>emb|AL512286.6| Human DNA sequence from clone RP11-45J1 on chromosome X Contains a
             prefoldin 4 (PFDN4) pseudogene, the 5' end of a novel gene
             and a CpG island, complete sequence
          Length = 91875

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 517   tgtcaagacagcaattaaatc 537
             |||||||||||||||||||||
Sbjct: 86903 tgtcaagacagcaattaaatc 86883
to top
>gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, complete sequence
          Length = 177958

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 549    ttaattgtttctttggcacag 569
              |||||||||||||||||||||
Sbjct: 107367 ttaattgtttctttggcacag 107387
to top
>gb|AC162456.3| Mus musculus chromosome 19, clone RP23-406F15, complete sequence
          Length = 173042

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 121    ctcacagtttgaaccaaactggaaa 145
              |||||| ||||||||||||||||||
Sbjct: 170413 ctcacattttgaaccaaactggaaa 170389
to top
>gb|AY136819.1| Bos taurus clone pBLS1 Bov-B LINE/BovB repeat sequence
          Length = 691

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 accaaactggaaaattcttaa 153
           |||||||||||||||||||||
Sbjct: 435 accaaactggaaaattcttaa 455
to top
>gb|AC092916.6| Homo sapiens 3 BAC RP11-615J4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 132182

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 38     ttctcctatttgttgagtgct 58
              |||||||||||||||||||||
Sbjct: 113521 ttctcctatttgttgagtgct 113541
to top
>dbj|AK095052.1| Homo sapiens cDNA FLJ37733 fis, clone BRHIP2020827
          Length = 2906

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 360  catcaaactcaatccattttc 380
            |||||||||||||||||||||
Sbjct: 1053 catcaaactcaatccattttc 1073
to top
>dbj|AK094349.1| Homo sapiens cDNA FLJ37030 fis, clone BRACE2011183
          Length = 2304

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 360 catcaaactcaatccattttc 380
           |||||||||||||||||||||
Sbjct: 452 catcaaactcaatccattttc 472
to top
>gb|AC020642.7| Homo sapiens chromosome 10 clone RP11-275D14, complete sequence
          Length = 145697

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     aatgatgtttaaataaaaaat 27
             |||||||||||||||||||||
Sbjct: 25537 aatgatgtttaaataaaaaat 25517
to top
>gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178328

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 360    catcaaactcaatccattttc 380
              |||||||||||||||||||||
Sbjct: 177512 catcaaactcaatccattttc 177532
to top
>gb|AC156614.7| Mus musculus chromosome 8, clone RP23-257H17, complete sequence
          Length = 168079

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 367    ctcaatccattttcctgaatg 387
              |||||||||||||||||||||
Sbjct: 124142 ctcaatccattttcctgaatg 124162
to top
>gb|AC157914.4| Mus musculus chromosome 19, clone RP24-284E14, complete sequence
          Length = 166967

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 121    ctcacagtttgaaccaaactggaaa 145
              |||||| ||||||||||||||||||
Sbjct: 109756 ctcacattttgaaccaaactggaaa 109780
to top
>gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.678_P_16, complete sequence
          Length = 156420

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   catcaaactcaatccattttc 380
             |||||||||||||||||||||
Sbjct: 19786 catcaaactcaatccattttc 19766
to top
>gb|AF040974.1|AF040974 Plasmodium vivax small subunit ribosomal RNA gene, plastid gene for
           plastid RNA, partial sequence
          Length = 949

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 143 aaaattcttaatactttaata 163
           |||||||||||||||||||||
Sbjct: 164 aaaattcttaatactttaata 144
to top
>dbj|AP006258.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-24F19, complete
             sequence
          Length = 174444

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 2     aaataaatgatgtttaaataaaaaa 26
             ||||||||||| |||||||||||||
Sbjct: 68165 aaataaatgatttttaaataaaaaa 68141
to top
>dbj|AP005639.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-131J4, complete
             sequence
          Length = 168302

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 2     aaataaatgatgtttaaataaaaaa 26
             ||||||||||| |||||||||||||
Sbjct: 53953 aaataaatgatttttaaataaaaaa 53929
to top
>dbj|AP005134.3| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-65J13, complete
             sequence
          Length = 121801

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 2     aaataaatgatgtttaaataaaaaa 26
             ||||||||||| |||||||||||||
Sbjct: 35751 aaataaatgatttttaaataaaaaa 35727
to top
>emb|AL607087.10| Mouse DNA sequence from clone RP23-18M1 on chromosome 4, complete
             sequence
          Length = 183786

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    taaataaaaaatnaacaaatcttt 39
             |||||||||||| |||||||||||
Sbjct: 79604 taaataaaaaataaacaaatcttt 79581
to top
>gb|AC167172.3| Mus musculus BAC clone RP23-166M7 from chromosome 3, complete sequence
          Length = 204419

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      aatgatgtttaaataaaaaa 26
              ||||||||||||||||||||
Sbjct: 201089 aatgatgtttaaataaaaaa 201070
to top
>gb|U88174.1| Caenorhabditis elegans cosmid M01A10, complete sequence
          Length = 25230

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  gatcacttcactcacagttt 130
            ||||||||||||||||||||
Sbjct: 8724 gatcacttcactcacagttt 8743
to top
>ref|NM_025813.1| Mus musculus major facilitator superfamily domain containing 1
            (Mfsd1), mRNA
          Length = 2980

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tggtggataaaacaggcaag 195
            ||||||||||||||||||||
Sbjct: 1016 tggtggataaaacaggcaag 1035
to top
>gb|AC139885.3| Mus musculus BAC clone RP23-349N15 from chromosome 9, complete sequence
          Length = 207340

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 12     tgtttaaataaaaaatnaacaaa 34
              |||||||||||||||| ||||||
Sbjct: 111471 tgtttaaataaaaaattaacaaa 111449
to top
>gb|BT013530.1| Lycopersicon esculentum clone 132248F, mRNA sequence
          Length = 2140

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  acttcactcacagtttgaac 134
            ||||||||||||||||||||
Sbjct: 1282 acttcactcacagtttgaac 1263
to top
>gb|AC124724.4| Mus musculus BAC clone RP23-446L16 from chromosome 19, complete
             sequence
          Length = 179952

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 17    aaataaaaaatnaacaaatcttt 39
             ||||||||||| |||||||||||
Sbjct: 46729 aaataaaaaataaacaaatcttt 46707
to top
>emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in linkage group 9, complete
              sequence
          Length = 235135

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    tactttaatacatccactca 173
              ||||||||||||||||||||
Sbjct: 216379 tactttaatacatccactca 216360



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    tactttaatacatccactca 173
              ||||||||||||||||||||
Sbjct: 215991 tactttaatacatccactca 215972
to top
>emb|AL359995.13| Human DNA sequence from clone RP13-209A14 on chromosome 10, complete
            sequence
          Length = 23336

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 312  cagataatttcaaaatctcttcct 335
            |||||||||||||||| |||||||
Sbjct: 3044 cagataatttcaaaatatcttcct 3067



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  caccagataatttcaaaatc 328
            ||||||||||||||||||||
Sbjct: 3021 caccagataatttcaaaatc 3040
to top
>gb|AC120049.5| Homo sapiens chromosome 18, clone RP11-456K23, complete sequence
          Length = 125488

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaaataaatgatgtttaaat 20
             ||||||||||||||||||||
Sbjct: 60516 aaaataaatgatgtttaaat 60497
to top
>gb|AC090133.6| Homo sapiens chromosome 8, clone RP11-813L8, complete sequence
          Length = 201279

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   ataatttcaaaatctcttcc 334
             ||||||||||||||||||||
Sbjct: 27279 ataatttcaaaatctcttcc 27260
to top
>emb|AL645967.20| Mouse DNA sequence from clone RP23-82J18 on chromosome 11 Contains a
              novel pseudogene, complete sequence
          Length = 166549

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 17     aaataaaaaatnaacaaatcttt 39
              ||||||||||| |||||||||||
Sbjct: 143273 aaataaaaaataaacaaatcttt 143251
to top
>emb|BX640406.9| Zebrafish DNA sequence from clone DKEY-187A3 in linkage group 13,
             complete sequence
          Length = 149208

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     ataaatgatgtttaaataaa 23
             ||||||||||||||||||||
Sbjct: 25188 ataaatgatgtttaaataaa 25169
to top
>gb|AC011146.10| Homo sapiens chromosome 8, clone RP11-2F15, complete sequence
          Length = 156951

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  acacaacttcagaaatataa 221
            ||||||||||||||||||||
Sbjct: 4933 acacaacttcagaaatataa 4914
to top
>gb|AC025089.9| Homo sapiens chromosome 8, clone RP11-275B19, complete sequence
          Length = 165870

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  acacaacttcagaaatataa 221
            ||||||||||||||||||||
Sbjct: 7084 acacaacttcagaaatataa 7103
to top
>gb|AC107988.4| Homo sapiens chromosome 18, clone CTC-346I21, complete sequence
          Length = 116247

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaataaatgatgtttaaat 20
             ||||||||||||||||||||
Sbjct: 29066 aaaataaatgatgtttaaat 29085
to top
>dbj|AK136108.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420457N10 product:SMAP-4 homolog
            [Homo sapiens], full insert sequence
          Length = 1848

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tggtggataaaacaggcaag 195
            ||||||||||||||||||||
Sbjct: 1007 tggtggataaaacaggcaag 1026
to top
>gb|AC105245.4| Homo sapiens chromosome 18, clone CTD-2515C13, complete sequence
          Length = 200721

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 1      aaaataaat-gatgtttaaataaaaaat 27
              ||||||||| ||||||||||||||||||
Sbjct: 199357 aaaataaatagatgtttaaataaaaaat 199384
to top
>dbj|AK135235.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
            region cDNA, RIKEN full-length enriched library,
            clone:6720442C10 product:SMAP-4 homolog [Homo sapiens],
            full insert sequence
          Length = 2984

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tggtggataaaacaggcaag 195
            ||||||||||||||||||||
Sbjct: 1016 tggtggataaaacaggcaag 1035
to top
>gb|AC074237.4| Homo sapiens chromosome 18, clone RP11-333K18, complete sequence
          Length = 181390

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 1      aaaataaat-gatgtttaaataaaaaat 27
              ||||||||| ||||||||||||||||||
Sbjct: 149571 aaaataaatagatgtttaaataaaaaat 149544
to top
>dbj|AK152444.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830072G24 product:SMAP-4 homolog [Homo
            sapiens], full insert sequence
          Length = 1861

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tggtggataaaacaggcaag 195
            ||||||||||||||||||||
Sbjct: 1037 tggtggataaaacaggcaag 1056
to top
>dbj|AK166645.1| Mus musculus morula whole body morula cDNA, RIKEN full-length
           enriched library, clone:I0C0045G09 product:hypothetical
           protein, full insert sequence
          Length = 1228

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 tggtggataaaacaggcaag 195
           ||||||||||||||||||||
Sbjct: 407 tggtggataaaacaggcaag 426
to top
>gb|AF165818.4|AF165818 Guillardia theta nucleomorph chromosome 1, complete sequence
          Length = 196216

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    tggaaaattcttaatacttt 159
              ||||||||||||||||||||
Sbjct: 110661 tggaaaattcttaatacttt 110642
to top
>dbj|AK159554.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420023M03 product:SMAP-4 homolog [Homo
            sapiens], full insert sequence
          Length = 1582

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tggtggataaaacaggcaag 195
            ||||||||||||||||||||
Sbjct: 1043 tggtggataaaacaggcaag 1062
to top
>emb|BX296542.12| Zebrafish DNA sequence from clone CH211-278C10 in linkage group 9,
              complete sequence
          Length = 174884

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    tactttaatacatccactca 173
              ||||||||||||||||||||
Sbjct: 113384 tactttaatacatccactca 113365
to top
>gb|AC021766.6| Homo sapiens, clone RP11-9H20, complete sequence
          Length = 151558

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    aaaataaatgatgtttaaat 20
            ||||||||||||||||||||
Sbjct: 9424 aaaataaatgatgtttaaat 9405
to top
>gb|AC090657.40| Mus musculus strain C57BL/6J clone rp23-410i12 map 18, complete sequence
          Length = 186929

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 17     aaataaaaaatnaacaaatcttt 39
              ||||||||||| |||||||||||
Sbjct: 168085 aaataaaaaataaacaaatcttt 168063
to top
>dbj|AK032688.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:6530433P22 product:CDNA FLJ14153
            FIS, CLONE NT2RM1000092, WEAKLY SIMILAR TO MULTIDRUG
            RESISTANCE PROTEIN 2 homolog [Homo sapiens], full insert
            sequence
          Length = 2961

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tggtggataaaacaggcaag 195
            ||||||||||||||||||||
Sbjct: 983  tggtggataaaacaggcaag 1002
to top
>dbj|AK075859.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2310002C18 product:CDNA FLJ14153 FIS,
            CLONE NT2RM1000092, WEAKLY SIMILAR TO MULTIDRUG
            RESISTANCE PROTEIN 2 homolog [Homo sapiens], full insert
            sequence
          Length = 1866

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tggtggataaaacaggcaag 195
            ||||||||||||||||||||
Sbjct: 1045 tggtggataaaacaggcaag 1064
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>dbj|AK004586.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
            library, clone:1200003O06 product:CDNA FLJ14153 FIS,
            CLONE NT2RM1000092, WEAKLY SIMILAR TO MULTIDRUG
            RESISTANCE PROTEIN 2 homolog [Homo sapiens], full insert
            sequence
          Length = 2980

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tggtggataaaacaggcaag 195
            ||||||||||||||||||||
Sbjct: 1016 tggtggataaaacaggcaag 1035
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>gb|AC069130.6|AC069130 Homo sapiens BAC clone RP11-468D10 from Y, complete sequence
          Length = 66874

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   aacaagaaattatcaatata 409
             ||||||||||||||||||||
Sbjct: 12501 aacaagaaattatcaatata 12520
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 381      ctgaatggcaacaagaaatt 400
                ||||||||||||||||||||
Sbjct: 25919325 ctgaatggcaacaagaaatt 25919344
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 1        aaaataaatgatgtttaaat 20
                ||||||||||||||||||||
Sbjct: 33049903 aaaataaatgatgtttaaat 33049922
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>gb|AC140847.4| Homo sapiens 12 BAC RP11-313F23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 134878

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    aacaagaaattatcaatata 409
              ||||||||||||||||||||
Sbjct: 114739 aacaagaaattatcaatata 114758
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>gb|U49831.1| Caenorhabditis elegans cosmid F10C1, complete sequence
          Length = 40014

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    aaaataaatgatgtttaaataaaa 24
            ||||||| ||||||||||||||||
Sbjct: 6856 aaaataactgatgtttaaataaaa 6879
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>gb|AF188029.5| Homo sapiens chromosome 8 clone GS1-56L10 map p22-p21, complete
             sequence
          Length = 106784

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   ataatttcaaaatctcttcc 334
             ||||||||||||||||||||
Sbjct: 22803 ataatttcaaaatctcttcc 22822
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>gb|AC012355.10| Homo sapiens BAC clone RP11-239I4 from 2, complete sequence
          Length = 120112

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 22    aaaaatnaacaaatctttctcct 44
             |||||| ||||||||||||||||
Sbjct: 15159 aaaaataaacaaatctttctcct 15181
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>gb|AC015978.4|AC015978 Homo sapiens BAC clone RP11-529I21 from Y, complete sequence
          Length = 178780

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   aacaagaaattatcaatata 409
             ||||||||||||||||||||
Sbjct: 60843 aacaagaaattatcaatata 60824
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>dbj|AK208838.1| Mus musculus cDNA, clone:Y2G0112O17, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000029344, based on BLAT search
          Length = 175

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 tggtggataaaacaggcaag 195
           ||||||||||||||||||||
Sbjct: 132 tggtggataaaacaggcaag 151
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_A01
          Length = 139121

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaataaatgatgtttaaat 20
             ||||||||||||||||||||
Sbjct: 95843 aaaataaatgatgtttaaat 95862
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>gb|AY603631.1| Culicoides sonorensis clone Cssg00671A unknown salivary protein
           mRNA, partial cds
          Length = 543

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 196 gtgtgcacacaacttcagaaatat 219
           ||||||| ||||||||||||||||
Sbjct: 163 gtgtgcaaacaacttcagaaatat 186
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>dbj|AK101128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025O17, full
            insert sequence
          Length = 2006

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 381  ctgaatggcaacaagaaatt 400
            ||||||||||||||||||||
Sbjct: 1858 ctgaatggcaacaagaaatt 1877
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>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y
          Length = 1351786

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    aacaagaaattatcaatata 409
              ||||||||||||||||||||
Sbjct: 898791 aacaagaaattatcaatata 898810
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>gb|BC024891.1| Mus musculus major facilitator superfamily domain containing 1, mRNA
            (cDNA clone MGC:28238 IMAGE:3992247), complete cds
          Length = 3009

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tggtggataaaacaggcaag 195
            ||||||||||||||||||||
Sbjct: 997  tggtggataaaacaggcaag 1016
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    aattatcaatatattgcaag 416
              ||||||||||||||||||||
Sbjct: 195183 aattatcaatatattgcaag 195202
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>gb|AC110174.10| Mus musculus chromosome 3, clone RP23-293K21, complete sequence
          Length = 253469

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 132    aaccaaactggaaaattcttaata 155
              |||||||||||||||| |||||||
Sbjct: 118017 aaccaaactggaaaatccttaata 118040
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 381      ctgaatggcaacaagaaatt 400
                ||||||||||||||||||||
Sbjct: 25847501 ctgaatggcaacaagaaatt 25847520
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>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of
             library Monsanto from chromosome 12 of cultivar Nipponbare
             of ssp. japonica of Oryza sativa (rice), complete sequence
          Length = 61296

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   ctgaatggcaacaagaaatt 400
             ||||||||||||||||||||
Sbjct: 55964 ctgaatggcaacaagaaatt 55945
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>emb|CT030639.8| Mouse DNA sequence from clone RP24-318P17 on chromosome 9, complete
             sequence
          Length = 198178

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 12    tgtttaaataaaaaatnaacaaa 34
             |||||||||||||||| ||||||
Sbjct: 11432 tgtttaaataaaaaattaacaaa 11410
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>gb|AC135635.5| Mus musculus BAC clone RP23-245M20 from 3, complete sequence
          Length = 192485

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    tggtggataaaacaggcaag 195
              ||||||||||||||||||||
Sbjct: 106794 tggtggataaaacaggcaag 106813
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>emb|AL627123.13| Mouse DNA sequence from clone RP23-351I23 on chromosome 4, complete
              sequence
          Length = 185022

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    aaggtgtgcacacaacttca 212
              ||||||||||||||||||||
Sbjct: 110809 aaggtgtgcacacaacttca 110790
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>emb|AL606928.9| Mouse DNA sequence from clone RP23-154F2 on chromosome 3, complete
              sequence
          Length = 186605

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aatgatgtttaaataaaaaa 26
              ||||||||||||||||||||
Sbjct: 170482 aatgatgtttaaataaaaaa 170501
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>dbj|AB025906.1| Cucumis melo CMe-ACS1 gene for 1-aminocyclopropane-1-carboxylate
            synthase, complete cds
          Length = 5264

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  tctcttcctcctttcgtatg 346
            ||||||||||||||||||||
Sbjct: 1525 tctcttcctcctttcgtatg 1544
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>dbj|AB032935.1| Cucumis melo CMe-ACS1 gene for 1-aminocyclopropane-1-carboxylate
            synthase, complete cds
          Length = 6241

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  tctcttcctcctttcgtatg 346
            ||||||||||||||||||||
Sbjct: 2151 tctcttcctcctttcgtatg 2170


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,815,039
Number of Sequences: 3902068
Number of extensions: 6815039
Number of successful extensions: 131822
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 131483
Number of HSP's gapped (non-prelim): 341
length of query: 570
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 547
effective length of database: 17,143,297,704
effective search space: 9377383844088
effective search space used: 9377383844088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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