ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3e22 |
|---|---|
| Clone Library Name | barley_pub |
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 48.5 bits (114), Expect = 1e-05 Identities = 25/62 (40%), Positives = 33/62 (53%) Frame = -3 Query: 580 LVIWAKPLLESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRFLK 401 L+ W K LL+ ++ LVD L Y EE+ + VA +C S RP M VVR L+ Sbjct: 505 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 564 Query: 400 GD 395 GD Sbjct: 565 GD 566
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 47.0 bits (110), Expect = 4e-05 Identities = 22/61 (36%), Positives = 34/61 (55%) Frame = -3 Query: 583 SLVIWAKPLLESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRFL 404 SLV WAKP + ++ + +VDP + GY E + + VA C+ + RP M +VR L Sbjct: 808 SLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVREL 867 Query: 403 K 401 + Sbjct: 868 E 868
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does| not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 47.0 bits (110), Expect = 4e-05 Identities = 22/61 (36%), Positives = 34/61 (55%) Frame = -3 Query: 583 SLVIWAKPLLESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRFL 404 SLV WAKP + ++ + +VDP + GY E + + VA C+ + RP M +VR L Sbjct: 809 SLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVREL 868 Query: 403 K 401 + Sbjct: 869 E 869
>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC| 2.7.11.1) Length = 423 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = -3 Query: 586 QSLVIWAKPLLESN-NMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVV 413 Q+LV WA+PL + N +VDP L Y + + LA+++MC+ +RP + VV Sbjct: 316 QNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVV 374
>PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1)| (AvrPphB susceptible protein 1) Length = 456 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -3 Query: 586 QSLVIWAKPLL-ESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVR 410 Q+LV WA+PL + L DP L + + LAVASMCI A RP + VV Sbjct: 299 QNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVT 358 Query: 409 FL 404 L Sbjct: 359 AL 360
>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC| 2.7.11.1) Length = 901 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/78 (32%), Positives = 39/78 (50%) Frame = -3 Query: 583 SLVIWAKPLLESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRFL 404 ++V WA PL+++ ++ ++DP L DLE + +VA C+ RPSM V L Sbjct: 719 NIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTAL 778 Query: 403 KGDRESLELMGKPKPTKP 350 + LMG P +P Sbjct: 779 --EHALALLMGSPCIEQP 794
>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)| Length = 412 Score = 39.7 bits (91), Expect = 0.007 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = -3 Query: 586 QSLVIWAKPLLESNN-MKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVR 410 Q LV WA+PLL + + ++D L Y +EE +A C+ LRP+M VV Sbjct: 290 QKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVS 349 Query: 409 FLK 401 L+ Sbjct: 350 HLE 352
>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)| Length = 410 Score = 36.6 bits (83), Expect = 0.056 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = -3 Query: 586 QSLVIWAKP-LLESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVR 410 ++LV WAKP L+ + ++D L Y +EE ++ C+ LRP+M VV Sbjct: 289 RNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVS 348 Query: 409 FLK 401 L+ Sbjct: 349 HLE 351
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 35.0 bits (79), Expect = 0.16 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = -3 Query: 532 LVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRFLKGDRESL 383 +VDP L GY L + +A MC+ A RP+M+ VV L +S+ Sbjct: 926 IVDPRL-TGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHMLTNPPKSV 974
>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)| Length = 389 Score = 35.0 bits (79), Expect = 0.16 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = -3 Query: 583 SLVIWAKPLLESNN-MKGLVDPSLDAGYDLEEMALTLAVASM-CIHHSANLRPSMKSVVR 410 +LV WA+P L + + ++DP L Y L AL +AV ++ CI A RP+M +V+ Sbjct: 290 NLVDWARPYLTNKRRLLRVMDPRLQGQYSLTR-ALKIAVLALDCISIDAKSRPTMNEIVK 348 Query: 409 FLK 401 ++ Sbjct: 349 TME 351
>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein| kinase precursor (FLG22-induced receptor-like kinase 1) Length = 876 Score = 34.3 bits (77), Expect = 0.28 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = -3 Query: 565 KPLLESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRFLK 401 + +L + +++G+VD L YD+ +A C H++ RP+M VV LK Sbjct: 789 RSILANGDIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELK 843
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 30.8 bits (68), Expect = 3.1 Identities = 15/62 (24%), Positives = 28/62 (45%) Frame = -3 Query: 586 QSLVIWAKPLLESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRF 407 + L+ W + + DP + EEM L L +A C+ + RP+ + +V + Sbjct: 954 RDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSW 1013 Query: 406 LK 401 L+ Sbjct: 1014 LE 1015
>ABCC9_RABIT (P82451) ATP-binding cassette transporter sub-family C member 9| (Sulfonylurea receptor 2) Length = 1549 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = -3 Query: 556 LESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRFLK 401 +ES N +G +DPS + +E + + +C+ + NL+P +K V ++K Sbjct: 1288 MESENYEGTMDPSQVPEHWPQEGEIK--IHDLCVRYENNLKPVLKHVKAYIK 1337
>ABCC9_HUMAN (O60706) ATP-binding cassette transporter sub-family C member 9| (Sulfonylurea receptor 2) Length = 1549 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = -3 Query: 556 LESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRFLK 401 +ES N +G +DPS + +E + + +C+ + NL+P +K V ++K Sbjct: 1288 MESENYEGTMDPSQVPEHWPQEGEIK--IHDLCVRYENNLKPVLKHVKAYIK 1337
>ABCC9_MOUSE (P70170) ATP-binding cassette transporter sub-family C member 9| (Sulfonylurea receptor 2) Length = 1546 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = -3 Query: 556 LESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRFLK 401 +ES N +G +DPS + +E + + +C+ + NL+P +K V ++K Sbjct: 1285 MESENYEGTMDPSQVPEHWPQEGEIK--IHDLCVRYENNLKPVLKHVKAYIK 1334
>ABCC9_RAT (Q63563) ATP-binding cassette transporter sub-family C member 9| (Sulfonylurea receptor 2) Length = 1545 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = -3 Query: 556 LESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRFLK 401 +ES N +G +DPS + +E + + +C+ + NL+P +K V ++K Sbjct: 1284 MESENYEGTMDPSQVPEHWPQEGEIK--IHDLCVRYENNLKPVLKHVKAYIK 1333
>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3) Length = 1164 Score = 30.0 bits (66), Expect = 5.2 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = -3 Query: 583 SLVIWAKPLLESNNMKGLVDPSL--DAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVR 410 +LV WAK L ++DP L D D+E + L +AS C+ RP+M V+ Sbjct: 1072 NLVGWAKQLYREKRGAEILDPELVTDKSGDVELLHY-LKIASQCLDDRPFKRPTMIQVMT 1130 Query: 409 FLK 401 K Sbjct: 1131 MFK 1133
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 29.3 bits (64), Expect = 8.9 Identities = 13/61 (21%), Positives = 30/61 (49%) Frame = -3 Query: 586 QSLVIWAKPLLESNNMKGLVDPSLDAGYDLEEMALTLAVASMCIHHSANLRPSMKSVVRF 407 + L+ W + + + DP + + + +EM L +A +C+ + RP+ + +V + Sbjct: 945 RDLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTTQQLVSW 1004 Query: 406 L 404 L Sbjct: 1005 L 1005
>TBB2_PORPU (P50260) Tubulin beta-2 chain (Beta-2 tubulin) (Fragment)| Length = 423 Score = 29.3 bits (64), Expect = 8.9 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Frame = +2 Query: 344 HWGLCGF-----RFSHQFERFPISLQETDHRFHARPQVCAMVDAHGRYCQGECHLFQVIS 508 H+ + GF R S Q+ + + T +F A+ +CA HGRY C +F+ Sbjct: 239 HFFMIGFAPLTSRGSQQYRALTVP-ELTQQQFDAKNMMCAADPRHGRYLTASC-MFRGRM 296 Query: 509 SIKRRVHQPLHV 544 S K Q L+V Sbjct: 297 STKEVDEQMLNV 308
>ARGJ_GLUOX (Q5FQD0) Arginine biosynthesis bifunctional protein argJ [Includes:| Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (Ornithine transacetylase) (OATase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate syn Length = 424 Score = 29.3 bits (64), Expect = 8.9 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +1 Query: 367 VFPSVRAIPDLPSRNGPPISC*AASLRYGGCTWTLLPG*VP-SLPGHIQHQEKGPPAPSC 543 V P R +PDL + G +S AA +RY G T +L VP ++ + + P AP Sbjct: 20 VSPLARPLPDLATIAGVRLSAVAAGIRYQGRTDLMLAEFVPGTVAAGVYTKNACPGAPVL 79 Query: 544 CSTRAAVLP 570 A P Sbjct: 80 WCREALTTP 88
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 29.3 bits (64), Expect = 8.9 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%) Frame = -3 Query: 583 SLVIWAKPLLESNNMKGLVDPSL--DAGYDLEEMALTLAVASMCIHHSANLRPSM---KS 419 +LV WAK L ++DP L D D+ E+ L +AS C+ RP+M + Sbjct: 1074 NLVGWAKQLYREKRGAEILDPELVTDKSGDV-ELFHYLKIASQCLDDRPFKRPTMIQLMA 1132 Query: 418 VVRFLKGDRESLELMGKPKPTKPPMFD 338 + + +K D E E + + + P+ + Sbjct: 1133 MFKEMKADTEEDESLDEFSLKETPLVE 1159
>TBB_EIMTE (Q27380) Tubulin beta chain (Beta tubulin)| Length = 449 Score = 29.3 bits (64), Expect = 8.9 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Frame = +2 Query: 344 HWGLCGF-----RFSHQFERFPISLQETDHRFHARPQVCAMVDAHGRYCQGECHLFQVIS 508 H+ L GF R S Q+ + + T F A+ +CA HGRY C LF+ Sbjct: 264 HFFLIGFAPLTSRGSQQYRALTVP-ELTQQMFDAKNMMCASDPRHGRYLTA-CALFRGRM 321 Query: 509 SIKRRVHQPLHV 544 S K Q L+V Sbjct: 322 STKEVDEQMLNV 333 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,289,379 Number of Sequences: 219361 Number of extensions: 2036511 Number of successful extensions: 5593 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 5374 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5588 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
