ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3e22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
2dbj|AK111631.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
4dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
5dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
6dbj|AK059197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
7dbj|AK063460.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 6e-16
8gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome 46 0.13
9emb|AL627411.21| Mouse DNA sequence from clone RP23-346H6 on chr... 44 0.51
10gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 42 2.0
11dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 42 2.0
12gb|AC079414.6| Homo sapiens chromosome 16 clone RP11-358L22, com... 42 2.0
13gb|AC092156.2| Homo sapiens BAC clone RP11-326J14 from 2, comple... 42 2.0
14dbj|AP003094.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.0
15emb|Z72621.1|SCYGL099W S.cerevisiae chromosome VII reading frame... 42 2.0
16gb|AC087309.10| Homo sapiens 12 BAC RP11-545J16 (Roswell Park Ca... 42 2.0
17gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 40 8.0
18gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 compl... 40 8.0
19gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete se... 40 8.0
20ref|XM_386338.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 8.0
21emb|Z69728.1|SPAC56F8 S.pombe chromosome I cosmid c56F8 40 8.0
22gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, gen... 40 8.0
23emb|BX511164.11| Zebrafish DNA sequence from clone DKEY-63J1 in ... 40 8.0
24ref|NM_001018613.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.0
25dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
27dbj|AK110987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
28dbj|AK100952.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
29dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.0
30emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4,... 40 8.0
31gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0 
>dbj|AK120152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029P14, full
            insert sequence
          Length = 1982

 Score =  198 bits (100), Expect = 1e-47
 Identities = 187/216 (86%)
 Strand = Plus / Minus

                                                                        
Query: 374  catcagttcgagcgattcccgatctcccttcaagaaacggaccaccgatttcatgctagg 433
            ||||| |||||| ||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 1710 catcatttcgagtgattccctatcccccttcaagaaacggaccaccgatttcatgctagg 1651

                                                                        
Query: 434  ccgcaagtttgcgctatggtggatgcacatggacgctactgccagggtgagtgccatctc 493
            |||| || ||| ||| ||||| ||||||||||| || ||||| ||| || | ||||| ||
Sbjct: 1650 ccgcgagcttgagctgtggtgaatgcacatggatgccactgctaggatgtgagccatttc 1591

                                                                        
Query: 494  ttccaggtcatatccagcatcaagagaagggtccaccagccccttcatgttgttcgactc 553
            |||  | ||||||||| ||||||||||||| ||||| ||  |||||||||||||||| ||
Sbjct: 1590 ttctggatcatatccaacatcaagagaaggatccactagttccttcatgttgttcgagtc 1531

                                                
Query: 554  gagcagcggttttgcccatatcaccaggctttgtct 589
            |||||  |||||||||||||| || |||||||||||
Sbjct: 1530 gagcaatggttttgcccatattactaggctttgtct 1495



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 270  gcaagctgcttgtgcttgtccagatcattgaggtaactcgtgcgagtgtaatcctctgaa 329
            ||||||| |||||||  ||| ||||| ||||||||||| | |||||| ||||||||||||
Sbjct: 1820 gcaagcttcttgtgccggtcgagatcgttgaggtaacttgagcgagtataatcctctgaa 1761

                             
Query: 330  tcacaggagtcaaacat 346
            || | |||||| |||||
Sbjct: 1760 tcgccggagtcgaacat 1744
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>dbj|AK111631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119L23, full
            insert sequence
          Length = 2439

 Score =  198 bits (100), Expect = 1e-47
 Identities = 187/216 (86%)
 Strand = Plus / Minus

                                                                        
Query: 374  catcagttcgagcgattcccgatctcccttcaagaaacggaccaccgatttcatgctagg 433
            ||||| |||||| ||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 2009 catcatttcgagtgattccctatcccccttcaagaaacggaccaccgatttcatgctagg 1950

                                                                        
Query: 434  ccgcaagtttgcgctatggtggatgcacatggacgctactgccagggtgagtgccatctc 493
            |||| || ||| ||| ||||| ||||||||||| || ||||| ||| || | ||||| ||
Sbjct: 1949 ccgcgagcttgagctgtggtgaatgcacatggatgccactgctaggatgtgagccatttc 1890

                                                                        
Query: 494  ttccaggtcatatccagcatcaagagaagggtccaccagccccttcatgttgttcgactc 553
            |||  | ||||||||| ||||||||||||| ||||| ||  |||||||||||||||| ||
Sbjct: 1889 ttctggatcatatccaacatcaagagaaggatccactagttccttcatgttgttcgagtc 1830

                                                
Query: 554  gagcagcggttttgcccatatcaccaggctttgtct 589
            |||||  |||||||||||||| || |||||||||||
Sbjct: 1829 gagcaatggttttgcccatattactaggctttgtct 1794



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                        
Query: 257  tcactgctccaacgcaagctgcttgtgcttgtccagatcattgaggtaactcgtgcgagt 316
            |||||||||||| ||||||| |||||||  ||| ||||| ||||||||||| | ||||||
Sbjct: 2132 tcactgctccaaggcaagcttcttgtgccggtcgagatcgttgaggtaacttgagcgagt 2073

                                          
Query: 317  gtaatcctctgaatcacaggagtcaaacat 346
             |||||||||||||| | |||||| |||||
Sbjct: 2072 ataatcctctgaatcgccggagtcgaacat 2043
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  123 bits (62), Expect = 7e-25
 Identities = 131/154 (85%)
 Strand = Plus / Minus

                                                                            
Query: 416      caccgatttcatgctaggccgcaagtttgcgctatggtggatgcacatggacgctactgc 475
                |||||||||||||||||||||| || ||| ||| ||||| ||||||||||| || |||||
Sbjct: 27033380 caccgatttcatgctaggccgcgagcttgagctgtggtgaatgcacatggatgccactgc 27033321

                                                                            
Query: 476      cagggtgagtgccatctcttccaggtcatatccagcatcaagagaagggtccaccagccc 535
                 ||| || | ||||| |||||  | ||||||||| ||||||||||||| ||||| ||  |
Sbjct: 27033320 taggatgtgagccatttcttctggatcatatccaacatcaagagaaggatccactagttc 27033261

                                                  
Query: 536      cttcatgttgttcgactcgagcagcggttttgcc 569
                ||||||||||||||| |||||||  |||||||||
Sbjct: 27033260 cttcatgttgttcgagtcgagcaatggttttgcc 27033227



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                            
Query: 257      tcactgctccaacgcaagctgcttgtgcttgtccagatcattgaggtaactcgtgcgagt 316
                |||||||||||| ||||||| |||||||  ||| ||||| ||||||||||| | ||||||
Sbjct: 27033641 tcactgctccaaggcaagcttcttgtgccggtcgagatcgttgaggtaacttgagcgagt 27033582

                                              
Query: 317      gtaatcctctgaatcacaggagtcaaacat 346
                 |||||||||||||| | |||||| |||||
Sbjct: 27033581 ataatcctctgaatcgccggagtcgaacat 27033552



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 374      catcagttcgagcgattcccgatctcccttcaagaaacggaccacc 419
                ||||| |||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 27033518 catcatttcgagtgattccctatcccccttcaagaaacggaccacc 27033473
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>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBb0065C04
          Length = 165270

 Score =  123 bits (62), Expect = 7e-25
 Identities = 131/154 (85%)
 Strand = Plus / Minus

                                                                          
Query: 416    caccgatttcatgctaggccgcaagtttgcgctatggtggatgcacatggacgctactgc 475
              |||||||||||||||||||||| || ||| ||| ||||| ||||||||||| || |||||
Sbjct: 157141 caccgatttcatgctaggccgcgagcttgagctgtggtgaatgcacatggatgccactgc 157082

                                                                          
Query: 476    cagggtgagtgccatctcttccaggtcatatccagcatcaagagaagggtccaccagccc 535
               ||| || | ||||| |||||  | ||||||||| ||||||||||||| ||||| ||  |
Sbjct: 157081 taggatgtgagccatttcttctggatcatatccaacatcaagagaaggatccactagttc 157022

                                                
Query: 536    cttcatgttgttcgactcgagcagcggttttgcc 569
              ||||||||||||||| |||||||  |||||||||
Sbjct: 157021 cttcatgttgttcgagtcgagcaatggttttgcc 156988



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                          
Query: 257    tcactgctccaacgcaagctgcttgtgcttgtccagatcattgaggtaactcgtgcgagt 316
              |||||||||||| ||||||| |||||||  ||| ||||| ||||||||||| | ||||||
Sbjct: 157402 tcactgctccaaggcaagcttcttgtgccggtcgagatcgttgaggtaacttgagcgagt 157343

                                            
Query: 317    gtaatcctctgaatcacaggagtcaaacat 346
               |||||||||||||| | |||||| |||||
Sbjct: 157342 ataatcctctgaatcgccggagtcgaacat 157313



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 374    catcagttcgagcgattcccgatctcccttcaagaaacggaccacc 419
              ||||| |||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 157279 catcatttcgagtgattccctatcccccttcaagaaacggaccacc 157234
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>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0473H04
          Length = 155204

 Score =  123 bits (62), Expect = 7e-25
 Identities = 131/154 (85%)
 Strand = Plus / Minus

                                                                        
Query: 416  caccgatttcatgctaggccgcaagtttgcgctatggtggatgcacatggacgctactgc 475
            |||||||||||||||||||||| || ||| ||| ||||| ||||||||||| || |||||
Sbjct: 2190 caccgatttcatgctaggccgcgagcttgagctgtggtgaatgcacatggatgccactgc 2131

                                                                        
Query: 476  cagggtgagtgccatctcttccaggtcatatccagcatcaagagaagggtccaccagccc 535
             ||| || | ||||| |||||  | ||||||||| ||||||||||||| ||||| ||  |
Sbjct: 2130 taggatgtgagccatttcttctggatcatatccaacatcaagagaaggatccactagttc 2071

                                              
Query: 536  cttcatgttgttcgactcgagcagcggttttgcc 569
            ||||||||||||||| |||||||  |||||||||
Sbjct: 2070 cttcatgttgttcgagtcgagcaatggttttgcc 2037



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                        
Query: 257  tcactgctccaacgcaagctgcttgtgcttgtccagatcattgaggtaactcgtgcgagt 316
            |||||||||||| ||||||| |||||||  ||| ||||| ||||||||||| | ||||||
Sbjct: 2451 tcactgctccaaggcaagcttcttgtgccggtcgagatcgttgaggtaacttgagcgagt 2392

                                          
Query: 317  gtaatcctctgaatcacaggagtcaaacat 346
             |||||||||||||| | |||||| |||||
Sbjct: 2391 ataatcctctgaatcgccggagtcgaacat 2362



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 374  catcagttcgagcgattcccgatctcccttcaagaaacggaccacc 419
            ||||| |||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 2328 catcatttcgagtgattccctatcccccttcaagaaacggaccacc 2283
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>dbj|AK059197.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A05, full
           insert sequence
          Length = 775

 Score =  123 bits (62), Expect = 7e-25
 Identities = 131/154 (85%)
 Strand = Plus / Minus

                                                                       
Query: 416 caccgatttcatgctaggccgcaagtttgcgctatggtggatgcacatggacgctactgc 475
           |||||||||||||||||||||| || ||| ||| ||||| ||||||||||| || |||||
Sbjct: 316 caccgatttcatgctaggccgcgagcttgagctgtggtgaatgcacatggatgccactgc 257

                                                                       
Query: 476 cagggtgagtgccatctcttccaggtcatatccagcatcaagagaagggtccaccagccc 535
            ||| || | ||||| |||||  | ||||||||| ||||||||||||| ||||| ||  |
Sbjct: 256 taggatgtgagccatttcttctggatcatatccaacatcaagagaaggatccactagttc 197

                                             
Query: 536 cttcatgttgttcgactcgagcagcggttttgcc 569
           ||||||||||||||| |||||||  |||||||||
Sbjct: 196 cttcatgttgttcgagtcgagcaatggttttgcc 163



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 77/90 (85%), Gaps = 1/90 (1%)
 Strand = Plus / Minus

                                                                       
Query: 257 tcactgctccaacgcaagctgcttgtgcttgtccagatcattgaggtaactcgtgcgagt 316
           |||||||||||| ||||||| |||||||  ||| ||||| ||||||||||| | ||||||
Sbjct: 576 tcactgctccaaggcaagcttcttgtgccggtcgagatcgttgaggtaacttgagcgagt 517

                                         
Query: 317 gtaatcctctgaatcacaggagtcaaacat 346
            | |||||||||||| | |||||| |||||
Sbjct: 516 at-atcctctgaatcgccggagtcgaacat 488



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 374 catcagttcgagcgattcccgatctcccttcaagaaacggaccacc 419
           ||||| |||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 454 catcatttcgagtgattccctatcccccttcaagaaacggaccacc 409
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>dbj|AK063460.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G11, full
            insert sequence
          Length = 1785

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 116/139 (83%)
 Strand = Plus / Plus

                                                                        
Query: 431  aggccgcaagtttgcgctatggtggatgcacatggacgctactgccagggtgagtgccat 490
            ||||||| || ||| ||| ||||| ||||||||||| || ||||| ||| || | |||||
Sbjct: 984  aggccgcgagcttgagctgtggtgaatgcacatggatgccactgctaggatgtgagccat 1043

                                                                        
Query: 491  ctcttccaggtcatatccagcatcaagagaagggtccaccagccccttcatgttgttcga 550
             |||||  | ||||||||| ||||||||||||| ||||| ||  ||||||||||||||||
Sbjct: 1044 ttcttctggatcatatccaacatcaagagaaggatccactagttccttcatgttgttcga 1103

                               
Query: 551  ctcgagcagcggttttgcc 569
             |||||||  |||||||||
Sbjct: 1104 gtcgagcaatggttttgcc 1122



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                       
Query: 257 tcactgctccaacgcaagctgcttgtgcttgtccagatcattgaggtaactcgtgcgagt 316
           |||||||||||| ||||||| |||||||  ||| ||||| ||||||||||| | ||||||
Sbjct: 797 tcactgctccaaggcaagcttcttgtgccggtcgagatcgttgaggtaacttgagcgagt 856

                                         
Query: 317 gtaatcctctgaatcacaggagtcaaacat 346
            |||||||||||||| | |||||| |||||
Sbjct: 857 ataatcctctgaatcgccggagtcgaacat 886



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 374 catcagttcgagcgattcccgatctcccttcaagaaacggaccacc 419
           ||||| |||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 920 catcatttcgagtgattccctatcccccttcaagaaacggaccacc 965
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>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 322   cctctgaatcacaggagtcaaac 344
             |||||||||||||||||||||||
Sbjct: 11556 cctctgaatcacaggagtcaaac 11578
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>emb|AL627411.21| Mouse DNA sequence from clone RP23-346H6 on chromosome X, complete
              sequence
          Length = 185184

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 310    tgcgagtgtaatcctctgaatc 331
              ||||||||||||||||||||||
Sbjct: 179607 tgcgagtgtaatcctctgaatc 179628
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 227     gccaaatctgtccaaactcgg 247
               |||||||||||||||||||||
Sbjct: 1715011 gccaaatctgtccaaactcgg 1715031
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 227     gccaaatctgtccaaactcgg 247
               |||||||||||||||||||||
Sbjct: 2715549 gccaaatctgtccaaactcgg 2715529
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>gb|AC079414.6| Homo sapiens chromosome 16 clone RP11-358L22, complete sequence
          Length = 167015

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 525    tccaccagccccttcatgttg 545
              |||||||||||||||||||||
Sbjct: 113523 tccaccagccccttcatgttg 113503
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>gb|AC092156.2| Homo sapiens BAC clone RP11-326J14 from 2, complete sequence
          Length = 168610

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 159   acaatcctataaacatctctg 179
             |||||||||||||||||||||
Sbjct: 26138 acaatcctataaacatctctg 26118
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>dbj|AP003094.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-659O1, complete
              sequences
          Length = 179724

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 57     atcacagtatcacaacatacagtga 81
              |||||||||||||||||||| ||||
Sbjct: 157489 atcacagtatcacaacatactgtga 157465
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>emb|Z72621.1|SCYGL099W S.cerevisiae chromosome VII reading frame ORF YGL099w
          Length = 3058

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 217  acaaaaagaagccaaatctgt 237
            |||||||||||||||||||||
Sbjct: 2051 acaaaaagaagccaaatctgt 2071
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>gb|AC087309.10| Homo sapiens 12 BAC RP11-545J16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 146677

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 134    agattgatccctcacatctatccat 158
              ||||||||||||||||||| |||||
Sbjct: 143245 agattgatccctcacatctctccat 143269
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    tcccgatctcccttcaagaa 409
              ||||||||||||||||||||
Sbjct: 288140 tcccgatctcccttcaagaa 288121



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    tcccgatctcccttcaagaa 409
              ||||||||||||||||||||
Sbjct: 274589 tcccgatctcccttcaagaa 274570
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>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence
          Length = 168746

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    tcccgatctcccttcaagaa 409
              ||||||||||||||||||||
Sbjct: 138382 tcccgatctcccttcaagaa 138363
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>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence
          Length = 285444

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    tcccgatctcccttcaagaa 409
              ||||||||||||||||||||
Sbjct: 136153 tcccgatctcccttcaagaa 136172
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>ref|XM_386338.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06162.1)
            partial mRNA
          Length = 1803

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 25   tacagccaacatcattggcc 44
            ||||||||||||||||||||
Sbjct: 1257 tacagccaacatcattggcc 1276
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>emb|Z69728.1|SPAC56F8 S.pombe chromosome I cosmid c56F8
          Length = 37093

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   atgacaccttggatcagcaa 117
            ||||||||||||||||||||
Sbjct: 2928 atgacaccttggatcagcaa 2947
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>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  tcccgatctcccttcaagaa 409
            ||||||||||||||||||||
Sbjct: 9715 tcccgatctcccttcaagaa 9696
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>emb|BX511164.11| Zebrafish DNA sequence from clone DKEY-63J1 in linkage group 19,
             complete sequence
          Length = 214001

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   gatcacaacgaagatagtca 210
             ||||||||||||||||||||
Sbjct: 97330 gatcacaacgaagatagtca 97311
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>ref|NM_001018613.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC56F8.02),
           partial mRNA
          Length = 4554

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  atgacaccttggatcagcaa 117
           ||||||||||||||||||||
Sbjct: 362 atgacaccttggatcagcaa 381
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 226      agccaaatctgtccaaactc 245
                ||||||||||||||||||||
Sbjct: 24686213 agccaaatctgtccaaactc 24686232
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 437      caagtttgcgctatggtgga 456
                ||||||||||||||||||||
Sbjct: 23549796 caagtttgcgctatggtgga 23549777
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>dbj|AK110987.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-D06, full
            insert sequence
          Length = 1736

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 437  caagtttgcgctatggtgga 456
            ||||||||||||||||||||
Sbjct: 1705 caagtttgcgctatggtgga 1686
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>dbj|AK100952.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139M01, full
            insert sequence
          Length = 2957

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 437  caagtttgcgctatggtgga 456
            ||||||||||||||||||||
Sbjct: 1694 caagtttgcgctatggtgga 1675
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>dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-732G1, complete
             sequences
          Length = 195800

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 58    tcacagtatcacaacatacagtga 81
             ||||||||||||||||||| ||||
Sbjct: 25778 tcacagtatcacaacatactgtga 25755
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>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
             complete sequence
          Length = 133856

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   agccaaatctgtccaaactc 245
             ||||||||||||||||||||
Sbjct: 75736 agccaaatctgtccaaactc 75755
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>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0095J22, complete sequence
          Length = 151730

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   caagtttgcgctatggtgga 456
             ||||||||||||||||||||
Sbjct: 86968 caagtttgcgctatggtgga 86949


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,606,077
Number of Sequences: 3902068
Number of extensions: 4606077
Number of successful extensions: 79601
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79435
Number of HSP's gapped (non-prelim): 165
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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