ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal2p16 |
|---|---|
| Clone Library Name | barley_pub |
>CY561_SHEEP (Q95204) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 102 bits (255), Expect = 8e-22 Identities = 50/121 (41%), Positives = 72/121 (59%) Frame = -3 Query: 671 TTKLIHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFL 492 TTK++H +LH A V+ VG+ F++H + G A+LYSLHSW GI +L+ QW+ GF Sbjct: 83 TTKVLHGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALFFAQWLVGFS 142 Query: 491 TFFFPKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLV 312 F FP A+ ++R P HV G +++L++ATA LG E L F + + PE L Sbjct: 143 FFLFPGASFSLRSRYRPQHVFFGAAIFLLSVATALLGLKEALLFELGTKYSTFEPEGVLA 202 Query: 311 N 309 N Sbjct: 203 N 203
>CY561_BOVIN (P10897) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 102 bits (255), Expect = 8e-22 Identities = 50/121 (41%), Positives = 72/121 (59%) Frame = -3 Query: 671 TTKLIHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFL 492 TTK++H +LH A V+ VG+ F++H + G A+LYSLHSW GI +L+ QW+ GF Sbjct: 83 TTKVLHGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALFFAQWLVGFS 142 Query: 491 TFFFPKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLV 312 F FP A+ ++R P HV G +++L++ATA LG E L F + + PE L Sbjct: 143 FFLFPGASFSLRSRYRPQHVFFGAAIFLLSVATALLGLKEALLFELGTKYSMFEPEGVLA 202 Query: 311 N 309 N Sbjct: 203 N 203
>CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 101 bits (252), Expect = 2e-21 Identities = 50/121 (41%), Positives = 69/121 (57%) Frame = -3 Query: 671 TTKLIHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFL 492 TTK++H +LH ALV+ VG+ F H + G A+LYSLHSW GI LY +QW+ GF Sbjct: 82 TTKVLHGLLHIFALVIALVGLVAVFDYHRKEGYADLYSLHSWCGILVFVLYFVQWLVGFS 141 Query: 491 TFFFPKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLV 312 F FP A+ ++R P H+ G +++L++ TA LG E L F + PE L Sbjct: 142 FFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLFKLRDKYSAFEPEGVLA 201 Query: 311 N 309 N Sbjct: 202 N 202
>CY561_HUMAN (P49447) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 101 bits (252), Expect = 2e-21 Identities = 50/121 (41%), Positives = 69/121 (57%) Frame = -3 Query: 671 TTKLIHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFL 492 TTK++H +LH ALV+ VG+ F H + G A+LYSLHSW GI LY +QW+ GF Sbjct: 82 TTKVLHGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVGFS 141 Query: 491 TFFFPKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLV 312 F FP A+ ++R P H+ G +++L++ TA LG E L F + PE L Sbjct: 142 FFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLFNLGGKYSAFEPEGVLA 201 Query: 311 N 309 N Sbjct: 202 N 202
>CY561_MOUSE (Q60720) Cytochrome b561 (Cytochrome b-561)| Length = 250 Score = 100 bits (250), Expect = 3e-21 Identities = 48/121 (39%), Positives = 68/121 (56%) Frame = -3 Query: 671 TTKLIHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFL 492 TTK++H +LH A ++ VG+ F H + G A+LYSLHSW GI LY +QW+ GF Sbjct: 81 TTKILHGLLHVFAFIIALVGLVAVFDYHKKKGYADLYSLHSWCGILVFVLYFVQWLVGFS 140 Query: 491 TFFFPKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLV 312 F FP A+ ++R P H+ G +++ ++ TA LG E L F S + PE L Sbjct: 141 FFLFPGASFSLRSRYRPQHIFFGATIFLFSVGTALLGLKEALLFKLGSKYSTFEPEGVLA 200 Query: 311 N 309 N Sbjct: 201 N 201
>CY561_PIG (Q95245) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 95.1 bits (235), Expect = 2e-19 Identities = 48/121 (39%), Positives = 68/121 (56%) Frame = -3 Query: 671 TTKLIHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFL 492 TTK++H +LH +A V+ VG+ F H + GIA+LYSLHSW GI L+ QW+ G Sbjct: 83 TTKILHGLLHVLAFVIALVGLVAVFDYHRKKGIADLYSLHSWCGILVFVLFLAQWLVGLG 142 Query: 491 TFFFPKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLV 312 F FP A+ ++R P HV G +++L++ TA LG E L F + + E L Sbjct: 143 FFLFPGASFSLRSRYRPQHVFFGAAIFLLSVGTALLGLKEALLFQLGTKYSAFESEGVLA 202 Query: 311 N 309 N Sbjct: 203 N 203
>CY561_XENLA (Q91577) Cytochrome b561 (Cytochrome b-561)| Length = 247 Score = 94.0 bits (232), Expect = 4e-19 Identities = 50/121 (41%), Positives = 69/121 (57%) Frame = -3 Query: 671 TTKLIHLVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFL 492 +TK++H VLH +ALV+ VG+ F+ H G ++YSLHSW GI T +LY +QWI GF Sbjct: 82 STKILHGVLHIMALVISLVGVIAVFQYHQANGYPDMYSLHSWCGIVTFTLYILQWIIGFS 141 Query: 491 TFFFPKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEKLTFLQSSGIDKYGPESFLV 312 FF P A R P H G +++ ++AT+ LG EK+ SS + E LV Sbjct: 142 LFFIPGVAFTYRSQFKPLHEFFGRALFLSSIATSLLGLTEKMFSEYSS----HPAEGILV 197 Query: 311 N 309 N Sbjct: 198 N 198
>CY561_CAEEL (P34465) Putative cytochrome b561 (Cytochrome b-561)| Length = 266 Score = 78.2 bits (191), Expect = 2e-14 Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 8/108 (7%) Frame = -3 Query: 668 TKLIHLVLHAIALVLGAVGIYCAFKNHN--------ETGIANLYSLHSWLGIGTISLYGI 513 +K +H++LH+ LV + + F HN I NL SLHSW+G+ + LY Sbjct: 93 SKTLHVILHSCVLVFMLMALKAVFDYHNLHKDPSGNPAPIVNLVSLHSWIGLSVVILYFA 152 Query: 512 QWIFGFLTFFFPKAAPNVRKGALPWHVLLGIFVYILALATAELGFLEK 369 Q+I GF+T+FFP +R+ +P+H + G+ ++I T +G E+ Sbjct: 153 QYIVGFITYFFPGMPIPIRQLVMPFHQMFGVLIFIFVSITVAMGISER 200
>YRN9_CAEEL (Q09609) Hypothetical protein R07B1.9| Length = 770 Score = 33.5 bits (75), Expect = 0.60 Identities = 19/66 (28%), Positives = 31/66 (46%) Frame = -3 Query: 650 VLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGFLTFFFPKA 471 +L+ I +V G +G Y ++NH +LY + +G T Y GF T+ KA Sbjct: 48 LLNFIHVVTGCIGFYSLWRNHGSIVTKSLYLVSFVIGFATAVFY------GFTTYRVVKA 101 Query: 470 APNVRK 453 N+ + Sbjct: 102 GENLNQ 107
>PTTBC_ECOLI (P36672) PTS system trehalose-specific EIIBC component (EIIBC-Tre)| (EII-Tre) [Includes: Trehalose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system trehalose-specific EIIB component); Trehalose permease IIC component Length = 473 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = -3 Query: 653 LVLHAIALVLGAVGIYCAFKNHNETGIANLYSLHSWLGIGTISLYGIQWIFGF 495 + L IA +GI + + HNE I+ ++ +WLG+ ++YGI + F Sbjct: 345 IALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRF 397
>EX7L_ZYMMO (Q9FDL4) Probable exodeoxyribonuclease VII large subunit (EC| 3.1.11.6) (Exonuclease VII large subunit) Length = 544 Score = 30.8 bits (68), Expect = 3.9 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Frame = -2 Query: 570 ELVQSAFLAWNRNNFSIWYSVDIWILDLLLPQGCAKCEEGCSSL------ARTSWNLRLH 409 ELV + W +N +W + D +L +G A+ E+ S + A+T L L Sbjct: 453 ELVTARLNIWQKNIDQLWRVAEQAHPDKILAKGYARVEDSHSHVVSNAHDAKTHKRLNLI 512 Query: 408 FSPGNGRTWVSGEAHLPPKLR 346 F +G WV+ E PPK R Sbjct: 513 FH--DGSVWVAPET--PPKSR 529
>MATK_LATCL (Q9TIR8) Maturase K (Intron maturase)| Length = 511 Score = 30.0 bits (66), Expect = 6.7 Identities = 9/24 (37%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Frame = +3 Query: 171 FLFMQ-YTSHILVFWDWSVTLWFF 239 FLF++ + ++++FW W +LWF+ Sbjct: 294 FLFVKKWKCYLIIFWQWHFSLWFY 317
>CP4CU_BLAGE (Q964T1) Cytochrome P450 4c21 (EC 1.14.14.1) (CYPIVC21)| Length = 501 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 16/56 (28%) Frame = -3 Query: 572 ANLYSL-HSWLGIGTISLYGIQW---------------IFGFLTFFFPKAAPNVRK 453 A LY L HSWLG G ++ G +W + GF+T F K+ VRK Sbjct: 103 AFLYDLFHSWLGTGLLTSSGAKWHQHRKIITPTFHFSILEGFITIFAEKSEILVRK 158
>ASPM_BOVIN (P62285) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 3371 Score = 29.6 bits (65), Expect = 8.7 Identities = 17/71 (23%), Positives = 33/71 (46%) Frame = +2 Query: 335 ICRCLSFGGR*ASPETQVLPLPGLKCKRRFQEVRAKEEHPSSHLAQPWGRRRSRIQISTE 514 IC +F G A + + +RRF+ + + S W +R+ R ++ T Sbjct: 2160 ICIQAAFRGMRARRRLKAMHSAAAVIQRRFRTLGMRRRFLSLRKTAVWVQRKYRAKVCTR 2219 Query: 515 YHIEKLFLFQA 547 +H+++L L +A Sbjct: 2220 HHVQQLRLQKA 2230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,927,788 Number of Sequences: 219361 Number of extensions: 2067106 Number of successful extensions: 5465 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 5272 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5462 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
