>RIN4_ARATH (Q8GYN5) RPM1-interacting protein 4|
          Length = 211

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 22/39 (56%), Positives = 30/39 (76%)
 Frame = -2

Query: 423 SEESGRPLPKFGEWDVNDPASADGFTVIFNKARDEKKAG 307
           S E    +PKFG+WD N+P+SADG+T IFNK R+E+ +G
Sbjct: 141 SPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSG 179

>TRP_DROME (P19334) Transient receptor potential protein|
          Length = 1275

 Score = 32.7 bits (73), Expect = 0.62
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -2

Query: 381  DVNDPASADGFTVIFNKARDEKKAGNGQDTESPCKDAR 268
            +V++ + ADG      K  D+KKAG+ +D + P KD++
Sbjct: 985  NVDEKSGADGKPGTMGKPTDDKKAGDDKDKQQPPKDSK 1022

>CARA_SULSO (Q59968) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase glutamine chain)
          Length = 367

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 256 HPLSPGVFARGFSILSIPSLFLIPGFVEYNCESI 357
           H +  G++ RGFSI+ +P  F     +EYN + I
Sbjct: 192 HGILYGLYKRGFSIVRVPCSFSASKIIEYNPKGI 225

>WWOX_PONPY (Q5R9W5) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 414

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = +1

Query: 283 RGFSILSIPSLFLIPGFVEYNCESISRSWVVDVPFAKLGQRATRFLRHGLSAAAVRSAEG 462
           R  S   + S  + PG + Y+  +I RSW V      L +  T+ ++ G +     +A  
Sbjct: 309 RRLSPRGVTSNAVHPGNMMYS--NIHRSWWVYTLLFTLARPFTKSMQQGAATTVYCAAAP 366

Query: 463 EGEGLGGKF 489
           E EGLGG +
Sbjct: 367 ELEGLGGMY 375

>WWOX_HUMAN (Q9NZC7) WW domain-containing oxidoreductase (EC 1.1.1.-) (Fragile|
           site FRA16D oxidoreductase)
          Length = 414

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = +1

Query: 283 RGFSILSIPSLFLIPGFVEYNCESISRSWVVDVPFAKLGQRATRFLRHGLSAAAVRSAEG 462
           R  S   + S  + PG + Y+  +I RSW V      L +  T+ ++ G +     +A  
Sbjct: 309 RRLSPRGVTSNAVHPGNMMYS--NIHRSWWVYTLLFTLARPFTKSMQQGAATTVYCAAVP 366

Query: 463 EGEGLGGKF 489
           E EGLGG +
Sbjct: 367 ELEGLGGMY 375


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,070,076
Number of Sequences: 219361
Number of extensions: 1908980
Number of successful extensions: 5215
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5215
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)