| Clone Name | rbaal2p15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ285630.1| Oryza sativa (indica cultivar-group) putative nitrate-induced NOI protein (75-1-127BAC12.1), putative NBS-LRR disease resistance protein (Nbs1-Pi9), putative NBS-LRR disease resistance protein (Nbs3-Pi9), and NBS-LRR disease resistance protein (Pi9) genes, complete cds; putative NBS-LRR disease resistance protein (Nbs4-Pi9) pseudogene, complete sequence; putative NBS-LRR disease resistance protein (Nbs5-Pi9) gene, complete cds; putative NBS-LRR disease resistance protein (Nbs6-Pi9) gene, partial cds; and solo-long terminal repeat retrotransposon, complete sequence Length = 76272 Score = 220 bits (111), Expect = 4e-54 Identities = 165/183 (90%) Strand = Plus / Minus Query: 239 ttggtggcataagattccaccctctcagtcctggcgtctttgcaaggggattcagtatct 298 |||| |||||| |||||||||||||||||||| | |||||||| || || ||||||||| Sbjct: 12561 ttgggggcatatgattccaccctctcagtcctagtctctttgcagggtgaatcagtatct 12502 Query: 299 tgtccattcccagcctttttctcatccctggctttgttgaatataactgtgaatccatca 358 || ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 12501 tgcccattcccaccctttttctcatctctggctttgttgaatatcactgtgaatccatca 12442 Query: 359 gcagaagctgggtcgttgacgtcccattcgccaaacttgggcaaagggcgaccagattcc 418 |||||||||||||||||||| |||||||| |||||||||||||| || ||||| | |||| Sbjct: 12441 gcagaagctgggtcgttgacatcccattcaccaaacttgggcaagggtcgacctgcttcc 12382 Query: 419 tcc 421 ||| Sbjct: 12381 tcc 12379 Score = 79.8 bits (40), Expect = 8e-12 Identities = 40/40 (100%) Strand = Plus / Minus Query: 94 tacaaggtcttatggatagtatgtatatagcaaaattaaa 133 |||||||||||||||||||||||||||||||||||||||| Sbjct: 12827 tacaaggtcttatggatagtatgtatatagcaaaattaaa 12788 Score = 50.1 bits (25), Expect = 0.007 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 14 aaccctcacaccatacatacaaacacttcagagttttacgagataccca 62 ||||||||||| ||||||||| |||| ||||||||||| ||||| |||| Sbjct: 12906 aaccctcacac-atacatacacacacctcagagttttaagagatgccca 12859 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 184 tcaagattgtgtaggacttggcgtcacgcagcaaaaccacttctt 228 |||||||||||||||||| | ||||| ||||||||||| ||||| Sbjct: 12751 tcaagattgtgtaggactggatgtcacacagcaaaaccatttctt 12707
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 208 bits (105), Expect = 1e-50 Identities = 168/189 (88%) Strand = Plus / Minus Query: 233 tttgccttggtggcataagattccaccctctcagtcctggcgtctttgcaaggggattca 292 |||| ||||| |||||| |||||||||||||||||||| | |||||||| || || ||| Sbjct: 10218097 tttgtcttgggggcatatgattccaccctctcagtcctagtttctttgcagggtgaatca 10218038 Query: 293 gtatcttgtccattcccagcctttttctcatccctggctttgttgaatataactgtgaat 352 |||||||| ||||||||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 10218037 gtatcttgcccattcccaccctttttctcatctctggctttgttgaatatcactgtgaat 10217978 Query: 353 ccatcagcagaagctgggtcgttgacgtcccattcgccaaacttgggcaaagggcgacca 412 |||||||| || |||||||||||||| |||||||| |||||||||||||| || ||||| Sbjct: 10217977 ccatcagcggacgctgggtcgttgacatcccattcaccaaacttgggcaagggacgacct 10217918 Query: 413 gattcctcc 421 | ||||||| Sbjct: 10217917 gcttcctcc 10217909 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 97 aaggtcttatggatagtatgtatatagcaaaattaaa 133 ||||||||||||||||||||||||||||||||||||| Sbjct: 10218354 aaggtcttatggatagtatgtatatagcaaaattaaa 10218318 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 184 tcaagattgtgtaggacttggcgtcacgcagcaaaaccacttctt 228 |||||||||||||||||| | ||||||||||||||||| ||||| Sbjct: 10218281 tcaagattgtgtaggactggatgtcacgcagcaaaaccatttctt 10218237
>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0649C11 Length = 138870 Score = 208 bits (105), Expect = 1e-50 Identities = 168/189 (88%) Strand = Plus / Minus Query: 233 tttgccttggtggcataagattccaccctctcagtcctggcgtctttgcaaggggattca 292 |||| ||||| |||||| |||||||||||||||||||| | |||||||| || || ||| Sbjct: 22324 tttgtcttgggggcatatgattccaccctctcagtcctagtttctttgcagggtgaatca 22265 Query: 293 gtatcttgtccattcccagcctttttctcatccctggctttgttgaatataactgtgaat 352 |||||||| ||||||||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 22264 gtatcttgcccattcccaccctttttctcatctctggctttgttgaatatcactgtgaat 22205 Query: 353 ccatcagcagaagctgggtcgttgacgtcccattcgccaaacttgggcaaagggcgacca 412 |||||||| || |||||||||||||| |||||||| |||||||||||||| || ||||| Sbjct: 22204 ccatcagcggacgctgggtcgttgacatcccattcaccaaacttgggcaagggacgacct 22145 Query: 413 gattcctcc 421 | ||||||| Sbjct: 22144 gcttcctcc 22136 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 97 aaggtcttatggatagtatgtatatagcaaaattaaa 133 ||||||||||||||||||||||||||||||||||||| Sbjct: 22581 aaggtcttatggatagtatgtatatagcaaaattaaa 22545 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 184 tcaagattgtgtaggacttggcgtcacgcagcaaaaccacttctt 228 |||||||||||||||||| | ||||||||||||||||| ||||| Sbjct: 22508 tcaagattgtgtaggactggatgtcacgcagcaaaaccatttctt 22464
>gb|AY104853.1| Zea mays PCO142365 mRNA sequence Length = 1031 Score = 167 bits (84), Expect = 5e-38 Identities = 159/184 (86%) Strand = Plus / Minus Query: 245 gcataagattccaccctctcagtcctggcgtctttgcaaggggattcagtatcttgtcca 304 |||||||||||||||||||||||||||| ||| ||| |||| || ||||| |||||||| Sbjct: 538 gcataagattccaccctctcagtcctggtgtccttggaaggtgactcagtgtcttgtccg 479 Query: 305 ttcccagcctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaa 364 |||||| |||| ||||| || ||||||||||||||||| || |||||||| || |||||| Sbjct: 478 ttcccacccttcttctcgtctctggctttgttgaatatgacagtgaatccgtctgcagaa 419 Query: 365 gctgggtcgttgacgtcccattcgccaaacttgggcaaagggcgaccagattcctccgac 424 ||||| || || || ||||| ||||||||||| ||||| ||||| || |||||||||| | Sbjct: 418 gctggatcattaacatcccaatcgccaaactttggcaaggggcggcctgattcctccgcc 359 Query: 425 atgg 428 |||| Sbjct: 358 atgg 355 Score = 44.1 bits (22), Expect = 0.45 Identities = 73/90 (81%) Strand = Plus / Plus Query: 175 ttgtcctcctcaagattgtgtaggacttggcgtcacgcagcaaaaccacttctttgaatt 234 ||||| |||||| ||||| ||||| || | ||||| || |||||||| ||||||| | Sbjct: 203 ttgtcttcctcaggattgcgtagggctggctgtcacacaacaaaaccatttctttgtgct 262 Query: 235 tgccttggtggcataagattccaccctctc 264 || ||| | |||||||||||||||||||| Sbjct: 263 tggctttgcagcataagattccaccctctc 292 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 18 ctcacaccatacatacaaacacttcagagttttacgagata 58 ||||||||||||||||| ||| |||||||||||||||| Sbjct: 748 ctcacaccatacatacacgcacgcaagagttttacgagata 708 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gtcttatggatagtatgtata 120 ||||||||||||||||||||| Sbjct: 666 gtcttatggatagtatgtata 646 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gtcttatggatagtatgtata 120 ||||||||||||||||||||| Sbjct: 145 gtcttatggatagtatgtata 165 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 18 ctcacaccatacatacaaacacttcagagttttacgagata 58 ||||||||||||||||| ||| |||||||||||||||| Sbjct: 75 ctcacaccatacatacacgcacgcaagagttttacgagata 115
>gb|AF045033.1|AF045033 Zea mays nitrate-induced NOI protein mRNA, complete cds Length = 612 Score = 147 bits (74), Expect = 4e-32 Identities = 158/186 (84%) Strand = Plus / Minus Query: 245 gcataagattccaccctctcagtcctggcgtctttgcaaggggattcagtatcttgtcca 304 |||||||| ||||||||||||||||||| ||| ||| |||| || || || ||||| ||| Sbjct: 335 gcataagactccaccctctcagtcctggggtccttggaaggtgagtctgtgtcttgacca 276 Query: 305 ttcccagcctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaa 364 |||||| |||| |||||||| ||||||||||||||||| || || ||||| || || ||| Sbjct: 275 ttcccacccttcttctcatctctggctttgttgaatatgacagtaaatccgtctgcggaa 216 Query: 365 gctgggtcgttgacgtcccattcgccaaacttgggcaaagggcgaccagattcctccgac 424 || || |||||||| |||||||| |||||||| ||||| || || || |||||||||| | Sbjct: 215 gccggatcgttgacatcccattcaccaaactttggcaagggacggcctgattcctccgcc 156 Query: 425 atggat 430 |||||| Sbjct: 155 atggat 150 Score = 44.1 bits (22), Expect = 0.45 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 83 tgggtacctcttacaaggtcttatggatagtatgtata 120 ||||||||||| ||| ||||||||||||||||||||| Sbjct: 477 tgggtacctct-acagtgtcttatggatagtatgtata 441
>gb|AF030385.1|AF030385 Zea mays nitrate-induced NOI protein gene, complete cds Length = 5278 Score = 137 bits (69), Expect = 4e-29 Identities = 150/177 (84%) Strand = Plus / Minus Query: 245 gcataagattccaccctctcagtcctggcgtctttgcaaggggattcagtatcttgtcca 304 |||||||| ||||||||||||||||||| ||| ||| |||| || || || ||||| ||| Sbjct: 4352 gcataagactccaccctctcagtcctggggtccttggaaggtgagtctgtgtcttgacca 4293 Query: 305 ttcccagcctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaa 364 |||||| |||| |||||||| ||||||||||||||||| || || ||||| || || ||| Sbjct: 4292 ttcccacccttcttctcatctctggctttgttgaatatgacagtaaatccgtctgcggaa 4233 Query: 365 gctgggtcgttgacgtcccattcgccaaacttgggcaaagggcgaccagattcctcc 421 || || |||||||| |||||||| |||||||| ||||| || || || ||||||||| Sbjct: 4232 gccggatcgttgacatcccattcaccaaactttggcaagggacggcctgattcctcc 4176 Score = 44.1 bits (22), Expect = 0.45 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 83 tgggtacctcttacaaggtcttatggatagtatgtata 120 ||||||||||| ||| ||||||||||||||||||||| Sbjct: 4719 tgggtacctct-acagtgtcttatggatagtatgtata 4683
>emb|CR962136.2| Medicago truncatula chromosome 5 clone mth2-52n22, COMPLETE SEQUENCE Length = 87738 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 313 ctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtc 372 ||||||||||||||| |||||||| || || |||||| | || ||||| |||||||| || Sbjct: 58114 ctttttctcatccctagctttgttaaaaatcactgtgtaaccttcagctgaagctggatc 58173 Query: 373 gttgacgtcccattcgccaaactt 396 |||||| ||||||||||||||||| Sbjct: 58174 gttgacatcccattcgccaaactt 58197
>emb|CR931742.1| Medicago truncatula chromosome 5 clone mth2-28i20, COMPLETE SEQUENCE Length = 115743 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 313 ctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtc 372 ||||||||||||||| |||||||| || || |||||| | || ||||| |||||||| || Sbjct: 22643 ctttttctcatccctagctttgttaaaaatcactgtgtaaccttcagctgaagctggatc 22702 Query: 373 gttgacgtcccattcgccaaactt 396 |||||| ||||||||||||||||| Sbjct: 22703 gttgacatcccattcgccaaactt 22726
>gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete sequence Length = 94766 Score = 79.8 bits (40), Expect = 8e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 314 tttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtcg 373 ||||||||||| ||||| |||||||||||||| |||||||| ||||| || || || || Sbjct: 82223 tttttctcatctctggccttgttgaatataacagtgaatccttcagctgatgcaggatca 82164 Query: 374 ttgacgtcccattcgccaaacttgggcaaagg 405 || || |||||||| ||||||||||| ||||| Sbjct: 82163 ttcacatcccattccccaaacttgggtaaagg 82132
>dbj|AK059360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-D12, full insert sequence Length = 303 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 97 aaggtcttatggatagtatgtatatagcaaaattaaa 133 ||||||||||||||||||||||||||||||||||||| Sbjct: 107 aaggtcttatggatagtatgtatatagcaaaattaaa 71 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 184 tcaagattgtgtaggacttggcgtcacgcagcaa 217 |||||||||||||||||| | |||||||||||| Sbjct: 34 tcaagattgtgtaggactggatgtcacgcagcaa 1
>ref|XM_467563.1| Oryza sativa (japonica cultivar-group), mRNA Length = 213 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 312 cctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggt 371 |||| |||||||||||||||||| |||| || || ||||| || || ||||| || |||| Sbjct: 115 ccttcttctcatccctggctttgctgaagatcaccgtgaaaccgtcggcagaggccgggt 56 Query: 372 cgttgacgtcccattcgccaaactt 396 ||||||||||||| |||| ||||| Sbjct: 55 tgttgacgtcccatgcgccgaactt 31 Score = 40.1 bits (20), Expect = 7.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 181 tcctcaagattgtgtaggacttggcgtcacgcagcaaaaccacttctt 228 |||||||| ||| || || || |||| ||| ||||||||||||||||| Sbjct: 191 tcctcaaggttgggtggggctgggcgacacacagcaaaaccacttctt 144
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 312 cctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggt 371 |||| |||||||||||||||||| |||| || || ||||| || || ||||| || |||| Sbjct: 30174034 ccttcttctcatccctggctttgctgaagatcaccgtgaaaccgtcggcagaggccgggt 30174093 Query: 372 cgttgacgtcccattcgccaaactt 396 ||||||||||||| |||| ||||| Sbjct: 30174094 tgttgacgtcccatgcgccgaactt 30174118 Score = 40.1 bits (20), Expect = 7.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 181 tcctcaagattgtgtaggacttggcgtcacgcagcaaaaccacttctt 228 |||||||| ||| || || || |||| ||| ||||||||||||||||| Sbjct: 30173730 tcctcaaggttgggtggggctgggcgacacacagcaaaaccacttctt 30173777
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 312 cctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggt 371 |||| |||||||||||||||||| |||| || || ||||| || || ||||| || |||| Sbjct: 46738 ccttcttctcatccctggctttgctgaagatcaccgtgaaaccgtcggcagaggccgggt 46797 Query: 372 cgttgacgtcccattcgccaaactt 396 ||||||||||||| |||| ||||| Sbjct: 46798 tgttgacgtcccatgcgccgaactt 46822 Score = 40.1 bits (20), Expect = 7.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 181 tcctcaagattgtgtaggacttggcgtcacgcagcaaaaccacttctt 228 |||||||| ||| || || || |||| ||| ||||||||||||||||| Sbjct: 46434 tcctcaaggttgggtggggctgggcgacacacagcaaaaccacttctt 46481
>ref|NM_124967.2| Arabidopsis thaliana NOI AT5G55850 (NOI) mRNA, complete cds Length = 866 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 313 ctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtc 372 ||||||||||||||| |||||||||||||| ||||| || || || || || ||||| || Sbjct: 351 ctttttctcatccctagctttgttgaatatcactgtaaaaccttctgctgatgctggatc 292 Query: 373 gttgacgtcccattcgccaaacttgggcaaagggcgacc 411 || || |||||||| ||||| || ||||| || ||||| Sbjct: 291 attcacatcccattcaccaaattttggcaagggacgacc 253
>gb|AY096671.1| Arabidopsis thaliana putative nitrate-induced NOI protein (At5g55850) mRNA, complete cds Length = 271 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 313 ctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtc 372 ||||||||||||||| |||||||||||||| ||||| || || || || || ||||| || Sbjct: 111 ctttttctcatccctagctttgttgaatatcactgtaaaaccttctgctgatgctggatc 52 Query: 373 gttgacgtcccattcgccaaacttgggcaaagggcgacc 411 || || |||||||| ||||| || ||||| || ||||| Sbjct: 51 attcacatcccattcaccaaattttggcaagggacgacc 13
>gb|AY065260.1| Arabidopsis thaliana putative NOI protein, nitrate-induced (At5g55850) mRNA, complete cds Length = 797 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 313 ctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtc 372 ||||||||||||||| |||||||||||||| ||||| || || || || || ||||| || Sbjct: 357 ctttttctcatccctagctttgttgaatatcactgtaaaaccttctgctgatgctggatc 298 Query: 373 gttgacgtcccattcgccaaacttgggcaaagggcgacc 411 || || |||||||| ||||| || ||||| || ||||| Sbjct: 297 attcacatcccattcaccaaattttggcaagggacgacc 259
>emb|BX833781.1|CNS09Z02 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 624 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 313 ctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtc 372 ||||||||||||||| |||||||||||||| ||||| || || || || || ||||| || Sbjct: 302 ctttttctcatccctagctttgttgaatatcactgtaaaaccttctgctgatgctggatc 243 Query: 373 gttgacgtcccattcgccaaacttgggcaaagggcgacc 411 || || |||||||| ||||| || ||||| || ||||| Sbjct: 242 attcacatcccattcaccaaattttggcaagggacgacc 204
>dbj|AB018120.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWJ3 Length = 42356 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 313 ctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtc 372 ||||||||||||||| |||||||||||||| ||||| || || || || || ||||| || Sbjct: 9530 ctttttctcatccctagctttgttgaatatcactgtaaaaccttctgctgatgctggatc 9471 Query: 373 gttgacgtcccattcgccaaacttgggcaaagggcgacc 411 || || |||||||| ||||| || ||||| || ||||| Sbjct: 9470 attcacatcccattcaccaaattttggcaagggacgacc 9432
>gb|AY105745.1| Zea mays PCO136119 mRNA sequence Length = 677 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 317 ttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtcgttg 376 |||||||||||||| ||| |||| || || ||||| || || ||||| || |||| ||| Sbjct: 250 ttctcatccctggccttgctgaagatcaccgtgaacccgtcggcagaggccgggttgttc 191 Query: 377 acgtcccattcgccaaacttggg 399 |||||||||||||| |||||||| Sbjct: 190 acgtcccattcgccgaacttggg 168
>gb|AF030386.1|AF030386 Arabidopsis thaliana NOI protein mRNA, complete cds Length = 632 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 313 ctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtc 372 ||||||||||||||| |||||||||||||| ||||| || || || || || ||||| || Sbjct: 311 ctttttctcatccctagctttgttgaatatcactgtaaaaccttctgctgatgctggatc 252 Query: 373 gttgacgtcccattcgccaaacttgggcaaagggcgacc 411 || || |||||||| ||||| || ||||| || ||||| Sbjct: 251 attcacatcccattcaccaaattttggcaagggacgacc 213
>gb|DQ160112.1| Taraxacum officinale TO72-1rc (To72-1rc) mRNA, partial cds Length = 350 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 313 ctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggtc 372 ||||||||||| ||| || |||||||||||||| ||||| || ||||| || || ||||| Sbjct: 153 ctttttctcattcctcgccttgttgaatataaccgtgaacccctcagctgatgcagggtc 94 Query: 373 gttgacgtcccattcgccaaacttgggcaa 402 || || ||||| || |||||||| ||||| Sbjct: 93 attcacatcccagtcaccaaactttggcaa 64
>gb|AY140529.1| Arabidopsis lyrata clone P3WB2-A11-KAR99-11 unknown protein gene, exons 1 and 2 and partial cds Length = 1105 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 312 cctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggt 371 |||||||||| | || ||||||||||| ||||| || ||||| ||||| || | |||| Sbjct: 1004 cctttttctcgtttctagctttgttgaagataacagtaaatccctcagctgatgaagggt 945 Query: 372 cgttgacgtcccattcgccaaacttgggcaaagggcg 408 | || || ||||||||||||||||| ||||| ||||| Sbjct: 944 cattcacatcccattcgccaaactttggcaacgggcg 908
>gb|AY140528.1| Arabidopsis lyrata clone P3WB2-A11-KAR99-4 unknown protein gene, exons 1 and 2 and partial cds Length = 1105 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 312 cctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggt 371 |||||||||| | || ||||||||||| ||||| || ||||| ||||| || | |||| Sbjct: 1004 cctttttctcgtttctagctttgttgaagataacagtaaatccctcagctgatgaagggt 945 Query: 372 cgttgacgtcccattcgccaaacttgggcaaagggcg 408 | || || ||||||||||||||||| ||||| ||||| Sbjct: 944 cattcacatcccattcgccaaactttggcaacgggcg 908
>gb|AY140527.1| Arabidopsis lyrata clone P3WB2-A11-KAR99-3 unknown protein gene, exons 1 and 2 and partial cds Length = 1105 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 312 cctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggt 371 |||||||||| | || ||||||||||| ||||| || ||||| ||||| || | |||| Sbjct: 1004 cctttttctcgtttctagctttgttgaagataacagtaaatccctcagctgatgaagggt 945 Query: 372 cgttgacgtcccattcgccaaacttgggcaaagggcg 408 | || || ||||||||||||||||| ||||| ||||| Sbjct: 944 cattcacatcccattcgccaaactttggcaacgggcg 908
>emb|BX833526.1|CNS09ZA1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZB12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 673 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 313 ctttttctcatccctggctttgttgaatataactgt 348 ||||||||||||||| |||||||||||||| ||||| Sbjct: 231 ctttttctcatccctagctttgttgaatattactgt 196
>gb|AY140526.1| Arabidopsis thaliana clone P3WB2-A11-6094 unknown protein gene, exons 1 and 2 and partial cds Length = 1011 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 882 gctttgttgaagataacagtaaatccctcagctgatgaagggtcatttacatcccattcg 823 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 822 ccaaacttcggcaacgggcg 803
>gb|AY140525.1| Arabidopsis thaliana clone P3WB2-A11-6092 unknown protein gene, exons 1 and 2 and partial cds Length = 1011 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 882 gctttgttgaagataacagtaaatccctcagctgatgaagggtcatttacatcccattcg 823 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 822 ccaaacttcggcaacgggcg 803
>gb|AY140524.1| Arabidopsis thaliana clone P3WB2-A11-6054 unknown protein gene, exons 1 and 2 and partial cds Length = 1014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 882 gctttgttgaagataacagtaaatccctcagctgatgaagggtcattaacatcccattcg 823 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 822 ccaaacttcggcaacgggcg 803
>gb|AY140522.1| Arabidopsis thaliana clone P3WB2-A11-1220 unknown protein gene, exons 1 and 2 and partial cds Length = 1012 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 883 gctttgttgaagataacagtaaatccctcagctgatgaagggtcattaacatcccattcg 824 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 823 ccaaacttcggcaacgggcg 804
>gb|AY140521.1| Arabidopsis thaliana clone P3WB2-A11-1202 unknown protein gene, exons 1 and 2 and partial cds Length = 1012 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 883 gctttgttgaagataacagtaaatccctcagctgatgaagggtcattaacatcccattcg 824 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 823 ccaaacttcggcaacgggcg 804
>gb|AY140520.1| Arabidopsis thaliana clone P3WB2-A11-1084 unknown protein gene, exons 1 and 2 and partial cds Length = 1011 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 882 gctttgttgaagataacagtaaatccctcagctgatgaagggtcattaacatcccattcg 823 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 822 ccaaacttcggcaacgggcg 803
>gb|AY140519.1| Arabidopsis thaliana clone P3WB2-A11-1074 unknown protein gene, exons 1 and 2 and partial cds Length = 1014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 882 gctttgttgaagataacagtaaatccctcagctgatgaagggtcattaacatcccattcg 823 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 822 ccaaacttcggcaacgggcg 803
>gb|AY140518.1| Arabidopsis thaliana clone P3WB2-A11-1006 unknown protein gene, exons 1 and 2 and partial cds Length = 1014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 882 gctttgttgaagataacagtaaatccctcagctgatgaagggtcattaacatcccattcg 823 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 822 ccaaacttcggcaacgggcg 803
>gb|AY140517.1| Arabidopsis thaliana clone P3WB2-A11-996 unknown protein gene, exons 1 and 2 and partial cds Length = 1014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 882 gctttgttgaagataacagtaaatccctcagctgatgaagggtcattaacatcccattcg 823 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 822 ccaaacttcggcaacgggcg 803
>gb|AY140516.1| Arabidopsis thaliana clone P3WB2-A11-970 unknown protein gene, exons 1 and 2 and partial cds Length = 1014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 882 gctttgttgaagataacagtaaatccctcagctgatgaagggtcattaacatcccattcg 823 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 822 ccaaacttcggcaacgggcg 803
>gb|AY140515.1| Arabidopsis thaliana clone P3WB2-A11-903 unknown protein gene, exons 1 and 2 and partial cds Length = 1017 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || ||||| ||||| || | ||||| || || ||||||||| Sbjct: 882 gctttgttgaagataacagtaaatccctcagctgatgaagggtcattaacatcccattcg 823 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 822 ccaaacttcggcaacgggcg 803
>gb|AY140531.1| Arabidopsis lyrata clone P3WB2-A11-KAR99-15 unknown protein gene, exons 1 and 2 and partial cds Length = 1136 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Minus Query: 312 cctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggt 371 |||||||||| | || ||||| ||||| ||||| || ||||| ||||| || | |||| Sbjct: 1035 cctttttctcgtttctagctttattgaagataacagtaaatccctcagctgatgaagggt 976 Query: 372 cgttgacgtcccattcgccaaacttgggcaaagggcg 408 | || || ||||||||||||||||| ||||| ||||| Sbjct: 975 cattcacatcccattcgccaaacttcggcaacgggcg 939
>gb|AY140530.1| Arabidopsis lyrata clone P3WB2-A11-KAR99-14 unknown protein gene, exons 1 and 2 and partial cds Length = 1137 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Minus Query: 312 cctttttctcatccctggctttgttgaatataactgtgaatccatcagcagaagctgggt 371 |||||||||| | || ||||| ||||| ||||| || ||||| ||||| || | |||| Sbjct: 1036 cctttttctcgtttctagctttattgaagataacagtaaatccctcagctgatgaagggt 977 Query: 372 cgttgacgtcccattcgccaaacttgggcaaagggcg 408 | || || ||||||||||||||||| ||||| ||||| Sbjct: 976 cattcacatcccattcgccaaacttcggcaacgggcg 940
>ref|NM_126474.1| Arabidopsis thaliana unknown protein AT2G04410 mRNA, complete cds Length = 521 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || || || ||||| || | ||||| || || ||||||||| Sbjct: 223 gctttgttgaagataacagtaaacccctcagctgatgaagggtcattaacatcccattcg 164 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 163 ccaaacttcggcaacgggcg 144
>gb|AC006951.6| Arabidopsis thaliana chromosome 2 clone T1O3 map RNS1, complete sequence Length = 99804 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || || || ||||| || | ||||| || || ||||||||| Sbjct: 68016 gctttgttgaagataacagtaaacccctcagctgatgaagggtcattaacatcccattcg 67957 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 67956 ccaaacttcggcaacgggcg 67937
>gb|AY058877.1| Arabidopsis thaliana At2g04410/T1O3.18 mRNA, complete cds Length = 563 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || || || ||||| || | ||||| || || ||||||||| Sbjct: 172 gctttgttgaagataacagtaaacccctcagctgatgaagggtcattaacatcccattcg 113 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 112 ccaaacttcggcaacgggcg 93
>gb|AY140523.1| Arabidopsis thaliana clone P3WB2-A11-1248 unknown protein gene, exons 1 and 2 and partial cds Length = 1012 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Minus Query: 329 gctttgttgaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcg 388 ||||||||||| ||||| || || || ||||| || | ||||| || || ||||||||| Sbjct: 883 gctttgttgaagataacagtaaacccctcagctgatgaagggtcattaacatcccattcg 824 Query: 389 ccaaacttgggcaaagggcg 408 |||||||| ||||| ||||| Sbjct: 823 ccaaacttcggcaacgggcg 804
>ref|NM_123429.2| Arabidopsis thaliana unknown protein AT5G40645 mRNA, complete cds Length = 438 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 337 gaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcgccaaa 393 ||||||||| || ||||| || || || ||||| ||||| ||||||||||| ||||| Sbjct: 197 gaatataaccgtaaatccttcggctgatgctggatcgttcacgtcccattctccaaa 141
>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence Length = 200560 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 457 gagggggagggagaggggctt 477 ||||||||||||||||||||| Sbjct: 161958 gagggggagggagaggggctt 161938
>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073C10, complete sequence Length = 165350 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 ggtgggaggaggaaggggaaa 521 ||||||||||||||||||||| Sbjct: 104799 ggtgggaggaggaaggggaaa 104779
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 ggtgggaggaggaaggggaaa 521 ||||||||||||||||||||| Sbjct: 2475909 ggtgggaggaggaaggggaaa 2475889
>gb|DQ447022.1| Arabidopsis thaliana clone pENTR221-At5g40645 nitrate-responsive NOI protein (At5g40645) mRNA, complete cds Length = 222 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 337 gaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcgccaaa 393 ||||||||| || ||||| || || || ||||| ||||| ||||||||||| ||||| Sbjct: 108 gaatataaccgtaaatccttcggctgatgctggatcgttcacgtcccattctccaaa 52
>emb|AL138899.23| Human DNA sequence from clone RP11-404O13 on chromosome 1 Contains two novel genes, a elongation factor RNA polymerase II 2 (ELL2) pseudogene, the CD1D gene for CD1D antigen, d polypeptide and a ribosomal protein S10 (RPS10) pseudogene, complete sequence Length = 134137 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 ttcccaaccattcttcttctg 164 ||||||||||||||||||||| Sbjct: 22089 ttcccaaccattcttcttctg 22069
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3 Length = 88010 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 tatgtatatagcaaaattaaa 133 ||||||||||||||||||||| Sbjct: 34515 tatgtatatagcaaaattaaa 34495
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 ggtgggaggaggaaggggaaa 521 ||||||||||||||||||||| Sbjct: 3906912 ggtgggaggaggaaggggaaa 3906892
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 ggtgggaggaggaaggggaaa 521 ||||||||||||||||||||| Sbjct: 2476019 ggtgggaggaggaaggggaaa 2475999
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 ggtgggaggaggaaggggaaa 521 ||||||||||||||||||||| Sbjct: 48405 ggtgggaggaggaaggggaaa 48385
>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13 Length = 85992 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 337 gaatataactgtgaatccatcagcagaagctgggtcgttgacgtcccattcgccaaa 393 ||||||||| || ||||| || || || ||||| ||||| ||||||||||| ||||| Sbjct: 55414 gaatataaccgtaaatccttcggctgatgctggatcgttcacgtcccattctccaaa 55470
>emb|AL135818.3|CNS01DVH Human chromosome 14 DNA sequence BAC C-2547L24 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203777 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 460 ggggagggagaggggcttgggggaa 484 |||||||||||||||| |||||||| Sbjct: 181202 ggggagggagaggggcctgggggaa 181226
>emb|AL133153.3|CNS01DU3 Human chromosome 14 DNA sequence BAC R-895M11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 231490 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 460 ggggagggagaggggcttgggggaa 484 |||||||||||||||| |||||||| Sbjct: 92744 ggggagggagaggggcctgggggaa 92768
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 cgagggggagggagaggggc 475 |||||||||||||||||||| Sbjct: 109590 cgagggggagggagaggggc 109571 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 cgagggggagggagaggggc 475 |||||||||||||||||||| Sbjct: 89936 cgagggggagggagaggggc 89917
>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence Length = 203574 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 gagggggagggagaggggct 476 |||||||||||||||||||| Sbjct: 196542 gagggggagggagaggggct 196523
>gb|AC113720.6| Rattus norvegicus 1 BAC CH230-117B1 (Children's Hospital Oakland Research Institute) complete sequence Length = 249629 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 ggggagggagaggggcttggggga 483 ||||||||||||||||| |||||| Sbjct: 134262 ggggagggagaggggctaggggga 134239
>gb|AC006028.3| Homo sapiens BAC clone GS1-165O14 from 7, complete sequence Length = 210608 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 gctgctggtgggaggaggaagggg 518 ||||||||||| |||||||||||| Sbjct: 195148 gctgctggtggcaggaggaagggg 195171
>gb|AC112150.4| Mus musculus BAC clone RP24-84I17 from chromosome 16, complete sequence Length = 211640 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 tgctggtgggaggaggaagg 516 |||||||||||||||||||| Sbjct: 136288 tgctggtgggaggaggaagg 136307
>gb|AC122214.4| Mus musculus BAC clone RP23-104J10 from chromosome 7, complete sequence Length = 176054 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aagattgtgtaggacttggc 205 |||||||||||||||||||| Sbjct: 7126 aagattgtgtaggacttggc 7145
>gb|BC014806.1| Mus musculus cDNA sequence BC023486, mRNA (cDNA clone IMAGE:4237171), containing frame-shift errors Length = 1595 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 gtgggaggaggaaggggaaa 521 |||||||||||||||||||| Sbjct: 293 gtgggaggaggaaggggaaa 274
>gb|AC099668.2| Homo sapiens chromosome 3 clone RP11-901L6, complete sequence Length = 242222 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 gggaggaggaaggggaaagc 523 |||||||||||||||||||| Sbjct: 64964 gggaggaggaaggggaaagc 64983
>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence Length = 221903 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cacaccatacatacaaacac 39 |||||||||||||||||||| Sbjct: 33377 cacaccatacatacaaacac 33358
>gb|AC099930.11| Mus musculus chromosome 7, clone RP23-17C12, complete sequence Length = 224617 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aagattgtgtaggacttggc 205 |||||||||||||||||||| Sbjct: 180995 aagattgtgtaggacttggc 181014
>gb|BC039766.1| Mus musculus cDNA sequence BC023486, mRNA (cDNA clone IMAGE:4159060), partial cds Length = 1598 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 gtgggaggaggaaggggaaa 521 |||||||||||||||||||| Sbjct: 297 gtgggaggaggaaggggaaa 278
>emb|BX511035.7| Human DNA sequence from clone RP11-435J19 on chromosome 22, complete sequence Length = 70823 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 ggagggagaggggcttgggg 481 |||||||||||||||||||| Sbjct: 8506 ggagggagaggggcttgggg 8487
>gb|AC012391.10| Homo sapiens chromosome 10 clone RP11-162A23, complete sequence Length = 181948 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cctcacaccatacatacaaa 36 |||||||||||||||||||| Sbjct: 2278 cctcacaccatacatacaaa 2297
>emb|AL355310.20| Human DNA sequence from clone RP5-1160K1 on chromosome 1 Contains the GPR61 gene for G protein-coupled receptor 61, the GNAI3 gene for guanine nucleotide binding protein (G protein) alpha inhibiting activity polypeptide 3, two novel genes, the GNAT2 gene for guanine nucleotide binding protein (G protein) alpha transducing activity polypeptide 2, the AMPD2 gene for adenosine monophosphate deaminase 2 (isoform L) and the 5' end of a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 112911 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tggtgggaggaggaagggga 519 |||||||||||||||||||| Sbjct: 7543 tggtgggaggaggaagggga 7562
>ref|NM_003458.2| Homo sapiens bassoon (presynaptic cytomatrix protein) (BSN), mRNA Length = 15966 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 gggaggaggaaggggaaagc 523 |||||||||||||||||||| Sbjct: 15719 gggaggaggaaggggaaagc 15700
>emb|AL021919.4|HS1045J21 Human DNA sequence from clone RP5-1045J21 on chromosome 1q23.3-24.3 Contains part of the TNR gene for tenascin R (restrictin, janusin), a novel gene and one CpG island, complete sequence Length = 138636 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ttcccagcctttttctcatc 324 |||||||||||||||||||| Sbjct: 101046 ttcccagcctttttctcatc 101027
>gb|AC118290.7| Rattus norvegicus 2 BAC CH230-366D18 (Children's Hospital Oakland Research Institute) complete sequence Length = 210896 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 ggggagggagaggggcttggggga 483 ||||||||||||||||| |||||| Sbjct: 91035 ggggagggagaggggctaggggga 91012
>gb|AC162287.4| Mus musculus chromosome 7, clone RP24-243J4, complete sequence Length = 152934 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 gtgggaggaggaaggggaaa 521 |||||||||||||||||||| Sbjct: 84665 gtgggaggaggaaggggaaa 84646
>emb|AL031883.1|DMC11F6 Drosophila melanogaster cosmid clone 11F6 Length = 36000 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 gagggggagggagaggggcttggg 480 ||||||||||| |||||||||||| Sbjct: 7344 gagggggagggggaggggcttggg 7367
>emb|AL954258.2| Pan troglodytes chromosome 22 clone PTB-146D01 map 22q22.3, complete sequence Length = 185080 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 atatagcaaaattaaacgaccatacttt 145 |||||||||||||||||| |||| |||| Sbjct: 14595 atatagcaaaattaaacgcccattcttt 14568
>emb|AL844182.10| Mouse DNA sequence from clone RP23-399H17 on chromosome 4, complete sequence Length = 201590 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 142 ctttcccaaccattcttcttctgg 165 |||||||||||||||||| ||||| Sbjct: 111528 ctttcccaaccattcttcctctgg 111505
>emb|AL589744.18| Mouse DNA sequence from clone RP23-80C18 on chromosome 13 Contains a nove gene, a ribosomal protein large p1 (Rplp1) pseudogene and the Cmah gene for CMP-N-Acetylneuraminic acid hydroxylase, complete sequence Length = 216800 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cacaccatacatacaaacac 39 |||||||||||||||||||| Sbjct: 158268 cacaccatacatacaaacac 158287
>gb|AC105774.8| Drosophila melanogaster X BAC RP98-8O5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170186 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 gagggggagggagaggggcttggg 480 ||||||||||| |||||||||||| Sbjct: 168413 gagggggagggggaggggcttggg 168436
>gb|AC092859.26| Pan troglodytes clone rp43-111m15, complete sequence Length = 175281 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tggtgggaggaggaagggga 519 |||||||||||||||||||| Sbjct: 138778 tggtgggaggaggaagggga 138759
>gb|AC006201.4| Arabidopsis thaliana chromosome 2 clone T27K22 map c245, complete sequence Length = 88149 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 attcctccgacatggattga 433 |||||||||||||||||||| Sbjct: 15324 attcctccgacatggattga 15343
>gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161668 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 gagggggagggagaggggcttggg 480 ||||||||||| |||||||||||| Sbjct: 54849 gagggggagggggaggggcttggg 54872
>emb|BX465229.7| Zebrafish DNA sequence from clone CH211-174D2 in linkage group 2, complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gtatgtatatagcaaaatta 131 |||||||||||||||||||| Sbjct: 123320 gtatgtatatagcaaaatta 123301
>gb|AC105061.16| Mus musculus chromosome 19, clone RP23-117I10, complete sequence Length = 210038 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cacaccatacatacaaacac 39 |||||||||||||||||||| Sbjct: 127480 cacaccatacatacaaacac 127461
>gb|AC121099.8| Mus musculus chromosome 3, clone RP24-501F21, complete sequence Length = 157318 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgggaggaggaaggggaaag 522 |||||||||||||||||||| Sbjct: 84920 tgggaggaggaaggggaaag 84901
>gb|AC022267.8|AC022267 Homo sapiens BAC clone RP11-407H18 from 4, complete sequence Length = 199472 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 tcccagcctttttctcatcc 325 |||||||||||||||||||| Sbjct: 168944 tcccagcctttttctcatcc 168963
>emb|BX324002.8| Zebrafish DNA sequence from clone CH211-129H21 in linkage group 24, complete sequence Length = 178173 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ctttgttgaatataactgtg 349 |||||||||||||||||||| Sbjct: 120365 ctttgttgaatataactgtg 120384
>gb|AC141000.7| Homo sapiens 3 BAC RP11-480C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175946 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 gggaggaggaaggggaaagc 523 |||||||||||||||||||| Sbjct: 88091 gggaggaggaaggggaaagc 88072
>gb|AC007614.7| Homo sapiens chromosome 16 clone RP11-491F9, complete sequence Length = 192347 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 ctggtgggaggaggaagggg 518 |||||||||||||||||||| Sbjct: 74644 ctggtgggaggaggaagggg 74663
>gb|AC138374.2| Homo sapiens chromosome 11, clone CTD-2647G13, complete sequence Length = 196424 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ggggagggagaggggcttgg 479 |||||||||||||||||||| Sbjct: 137856 ggggagggagaggggcttgg 137875
>gb|AY230143.1| Leishmania major clone B2015 phosphoglycan beta 1,2 arabinosyltransferase 1 (SCA1) gene, complete cds Length = 3185 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 cgagggggagggagaggggc 475 |||||||||||||||||||| Sbjct: 2834 cgagggggagggagaggggc 2853
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ttcttcttctggggtggcagcttg 177 |||||||||||||||||| ||||| Sbjct: 2937175 ttcttcttctggggtggctgcttg 2937198
>gb|AC131934.13| Homo sapiens chromosome 11, clone RP11-754B17, complete sequence Length = 154813 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ggggagggagaggggcttgg 479 |||||||||||||||||||| Sbjct: 128931 ggggagggagaggggcttgg 128912
>gb|AF434264.1| Salmo trutta clone 64 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 cgccgagggggagggagagg 472 |||||||||||||||||||| Sbjct: 109 cgccgagggggagggagagg 90
>gb|AF434263.1| Salmo trutta clone 76 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 cgccgagggggagggagagg 472 |||||||||||||||||||| Sbjct: 109 cgccgagggggagggagagg 90
>gb|AF434262.1| Salmo trutta clone 75 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 cgccgagggggagggagagg 472 |||||||||||||||||||| Sbjct: 109 cgccgagggggagggagagg 90
>gb|AF434261.1| Salmo trutta clone 74 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 cgccgagggggagggagagg 472 |||||||||||||||||||| Sbjct: 109 cgccgagggggagggagagg 90
>gb|AF434260.1| Salmo trutta clone 53 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 cgccgagggggagggagagg 472 |||||||||||||||||||| Sbjct: 109 cgccgagggggagggagagg 90
>gb|AF434259.1| Salmo trutta clone 68 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 cgccgagggggagggagagg 472 |||||||||||||||||||| Sbjct: 109 cgccgagggggagggagagg 90
>gb|AF434258.1| Salmo trutta clone 52 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 cgccgagggggagggagagg 472 |||||||||||||||||||| Sbjct: 109 cgccgagggggagggagagg 90
>gb|AF434257.1| Salmo trutta clone 55 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 cgccgagggggagggagagg 472 |||||||||||||||||||| Sbjct: 109 cgccgagggggagggagagg 90
>gb|AF434256.1| Salmo trutta clone 51 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 cgccgagggggagggagagg 472 |||||||||||||||||||| Sbjct: 109 cgccgagggggagggagagg 90
>gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, complete sequence Length = 228068 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 gtgggaggaggaaggggaaa 521 |||||||||||||||||||| Sbjct: 18532 gtgggaggaggaaggggaaa 18551
>gb|BC087948.1| Mus musculus cDNA sequence BC023486, mRNA (cDNA clone IMAGE:30122298) Length = 1631 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 gtgggaggaggaaggggaaa 521 |||||||||||||||||||| Sbjct: 277 gtgggaggaggaaggggaaa 258
>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 Length = 340000 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 atatagcaaaattaaacgaccatacttt 145 |||||||||||||||||| |||| |||| Sbjct: 96496 atatagcaaaattaaacgcccattcttt 96469
>emb|CR937049.3| CH230-323M7, complete sequence Length = 198674 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 ggggagggagaggggcttggggga 483 ||||||||||||||||| |||||| Sbjct: 28810 ggggagggagaggggctaggggga 28787
>dbj|AP006284.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-496I9, complete sequence Length = 104658 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ggggagggagaggggcttgg 479 |||||||||||||||||||| Sbjct: 80383 ggggagggagaggggcttgg 80402
>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete sequence Length = 315092 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 gagggggagggagaggggcttggg 480 ||||||||||| |||||||||||| Sbjct: 38216 gagggggagggggaggggcttggg 38239
>gb|AF052224.1|AF052224 Homo sapiens neuronal double zinc finger protein (ZNF231) mRNA, complete cds Length = 15964 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 gggaggaggaaggggaaagc 523 |||||||||||||||||||| Sbjct: 15718 gggaggaggaaggggaaagc 15699
>emb|BX322562.1|HSQ21A11 Homo sapiens chromosome 21 from cosmid LL21NC02-21A1 map 21q22.3 region D21S171-LA161, complete sequence Length = 45600 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 atatagcaaaattaaacgaccatacttt 145 |||||||||||||||||| |||| |||| Sbjct: 14960 atatagcaaaattaaacgcccattcttt 14933
>emb|CT010517.11| Mouse DNA sequence from clone RP23-357P12 on chromosome 16, complete sequence Length = 188228 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 tgctggtgggaggaggaagg 516 |||||||||||||||||||| Sbjct: 21946 tgctggtgggaggaggaagg 21927
>emb|CR962122.2| Medicago truncatula chromosome 5 clone mte1-46l20, COMPLETE SEQUENCE Length = 150486 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 agcaaaattaaacgaccatacttt 145 ||||||||||||||| |||||||| Sbjct: 70547 agcaaaattaaacgatcatacttt 70524
>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete sequence Length = 231247 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 gagggggagggagaggggct 476 |||||||||||||||||||| Sbjct: 44823 gagggggagggagaggggct 44804
>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 ccaaccattcttcttctggggtgg 170 ||||||||||||||||||| |||| Sbjct: 64483 ccaaccattcttcttctggtgtgg 64460
>emb|AL929506.8| Mouse DNA sequence from clone RP23-223I8 on chromosome 4, complete sequence Length = 63478 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 ttaaacgaccatactttcccaacc 152 |||||| ||||||||||||||||| Sbjct: 60468 ttaaaccaccatactttcccaacc 60491 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,528,211 Number of Sequences: 3902068 Number of extensions: 5528211 Number of successful extensions: 145584 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145052 Number of HSP's gapped (non-prelim): 530 length of query: 523 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 500 effective length of database: 17,143,297,704 effective search space: 8571648852000 effective search space used: 8571648852000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)