ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3e21 |
|---|---|
| Clone Library Name | barley_pub |
>2ABB_ARATH (Q39247) Serine/threonine protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, beta isoform) (AtB beta) Length = 501 Score = 50.4 bits (119), Expect = 4e-06 Identities = 21/22 (95%), Positives = 21/22 (95%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMYYA 588 AWHPTENSIACAA NSLYMYYA Sbjct: 480 AWHPTENSIACAAANSLYMYYA 501
>2ABA_ARATH (Q38821) Serine/threonine protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, alpha isoform) (AtB alpha) Length = 513 Score = 48.5 bits (114), Expect = 2e-05 Identities = 20/22 (90%), Positives = 20/22 (90%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMYYA 588 AWHP ENSIACAA NSLYMYYA Sbjct: 492 AWHPNENSIACAAANSLYMYYA 513
>VPX_SIVM1 (P05917) VPX protein (X ORF protein)| Length = 112 Score = 35.8 bits (81), Expect = 0.11 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = -2 Query: 551 LCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414 LC ++ AL M +K CR L G G GGW PG PP P +A Sbjct: 72 LCLIQ-KALFMHCKKGCRCLGE----GHGAGGWRPGPPPPPPPGLA 112
>2ABB_RAT (P36877) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) (PP2A, subuni Length = 443 Score = 33.5 bits (75), Expect = 0.57 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP+EN IA AA N+LY++ Sbjct: 419 AWHPSENIIAVAATNNLYIF 438
>2ABB_PONPY (Q5R4A2) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) Length = 443 Score = 33.5 bits (75), Expect = 0.57 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP+EN IA AA N+LY++ Sbjct: 419 AWHPSENIIAVAATNNLYIF 438
>2ABB_PIG (P54614) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) Length = 443 Score = 33.5 bits (75), Expect = 0.57 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP+EN IA AA N+LY++ Sbjct: 419 AWHPSENIIAVAATNNLYIF 438
>2ABB_MOUSE (Q6ZWR4) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) Length = 443 Score = 33.5 bits (75), Expect = 0.57 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP+EN IA AA N+LY++ Sbjct: 419 AWHPSENIIAVAATNNLYIF 438
>2ABB_MACFA (Q4R8L3) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) Length = 443 Score = 33.5 bits (75), Expect = 0.57 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP+EN IA AA N+LY++ Sbjct: 419 AWHPSENIIAVAATNNLYIF 438
>2ABB_HUMAN (Q00005) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) Length = 443 Score = 33.5 bits (75), Expect = 0.57 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP+EN IA AA N+LY++ Sbjct: 419 AWHPSENIIAVAATNNLYIF 438
>2ABB_RABIT (Q00006) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) (Fragment) Length = 413 Score = 33.5 bits (75), Expect = 0.57 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP+EN IA AA N+LY++ Sbjct: 389 AWHPSENIIAVAATNNLYIF 408
>BIOD_CHLPN (Q9Z6L7) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin| synthase) (DTB synthetase) (DTBS) Length = 219 Score = 33.5 bits (75), Expect = 0.57 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 487 DDNVLHHFSGCMCKAEAFTLHKP 555 D N++H SG C EA+ LHKP Sbjct: 43 DSNIVHELSGAYCHPEAYRLHKP 65
>2ABA_CANTR (P53031) Protein phosphatase PP2A regulatory subunit B (PR55) (Cell| division control protein 55) Length = 508 Score = 33.5 bits (75), Expect = 0.57 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 +WHP ENS+A AA N+LY++ Sbjct: 486 SWHPRENSVAIAATNNLYIF 505
>2ABG_RAT (P97888) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B gamma isoform (PP2A, subunit B, B-gamma isoform) (PP2A, subunit B, B55-gamma isoform) (PP2A, subunit B, PR55-gamma isoform) (PP2A, subunit B, R2-gamma isoform) (PP2A, s Length = 447 Score = 33.1 bits (74), Expect = 0.74 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA AA N+LY++ Sbjct: 419 AWHPAENIIAIAATNNLYIF 438
>2ABG_RABIT (P50410) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B gamma isoform (PP2A, subunit B, B-gamma isoform) (PP2A, subunit B, B55-gamma isoform) (PP2A, subunit B, PR55-gamma isoform) (PP2A, subunit B, R2-gamma isoform) Length = 447 Score = 33.1 bits (74), Expect = 0.74 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA AA N+LY++ Sbjct: 419 AWHPAENIIAIAATNNLYIF 438
>2ABG_MOUSE (Q8BG02) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B gamma isoform (PP2A, subunit B, B-gamma isoform) (PP2A, subunit B, B55-gamma isoform) (PP2A, subunit B, PR55-gamma isoform) (PP2A, subunit B, R2-gamma isoform) Length = 447 Score = 33.1 bits (74), Expect = 0.74 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA AA N+LY++ Sbjct: 419 AWHPAENIIAIAATNNLYIF 438
>2ABG_MACFA (Q95LP0) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B gamma isoform (PP2A, subunit B, B-gamma isoform) (PP2A, subunit B, B55-gamma isoform) (PP2A, subunit B, PR55-gamma isoform) (PP2A, subunit B, R2-gamma isoform) Length = 447 Score = 33.1 bits (74), Expect = 0.74 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA AA N+LY++ Sbjct: 419 AWHPAENIIAIAATNNLYIF 438
>2ABG_HUMAN (Q9Y2T4) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B gamma isoform (PP2A, subunit B, B-gamma isoform) (PP2A, subunit B, B55-gamma isoform) (PP2A, subunit B, PR55-gamma isoform) (PP2A, subunit B, R2-gamma isoform) (IMYPN Length = 447 Score = 33.1 bits (74), Expect = 0.74 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA AA N+LY++ Sbjct: 419 AWHPAENIIAIAATNNLYIF 438
>2ABA_YEAST (Q00362) Protein phosphatase PP2A regulatory subunit B (PR55) (Cell| division control protein 55) Length = 526 Score = 33.1 bits (74), Expect = 0.74 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMYYA 588 +WHP ENSIA AA N+L+++ A Sbjct: 504 SWHPRENSIAVAATNNLFIFSA 525
>2ABD_CHICK (Q5ZIY5) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform) Length = 451 Score = 32.7 bits (73), Expect = 0.97 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA AA N+LY++ Sbjct: 427 AWHPMENIIAVAATNNLYIF 446
>2ABD_HUMAN (Q66LE6) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform) Length = 453 Score = 32.0 bits (71), Expect = 1.7 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP +N IA AA N+LY++ Sbjct: 429 AWHPVDNVIAVAATNNLYIF 448
>VPX_SIVSP (P19508) VPX protein (X ORF protein)| Length = 112 Score = 32.0 bits (71), Expect = 1.7 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = -2 Query: 551 LCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414 LC ++ A+ M +K CR L G GGW PG PP P +A Sbjct: 72 LCLIQ-KAMFMHCKKGCRCLGG----EHGAGGWRPGPPPPPPPGLA 112
>VPX_SIVML (P11266) VPX protein (X ORF protein)| Length = 112 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = -2 Query: 530 ALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414 AL M +K CR L G GGW PG PP P +A Sbjct: 78 ALFMHCKKGCRCLGE----GHRAGGWRPGPPPPPPPGLA 112
>VPX_SIVMK (P05916) VPX protein (X ORF protein)| Length = 112 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = -2 Query: 530 ALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414 AL M +K CR L G GGW PG PP P +A Sbjct: 78 ALFMHCKKGCRCLGE----GHRAGGWRPGPPPPPPPGLA 112
>2ABA_RAT (P36876) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) (PP2A, s Length = 447 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA A N+LY++ Sbjct: 423 AWHPKENIIAVATTNNLYIF 442
>2ABA_RABIT (P63150) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) Length = 447 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA A N+LY++ Sbjct: 423 AWHPKENIIAVATTNNLYIF 442
>2ABA_MOUSE (Q6P1F6) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) Length = 447 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA A N+LY++ Sbjct: 423 AWHPKENIIAVATTNNLYIF 442
>2ABA_MACFA (Q4R7Z4) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) Length = 447 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA A N+LY++ Sbjct: 423 AWHPKENIIAVATTNNLYIF 442
>2ABA_HUMAN (P63151) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) Length = 447 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA A N+LY++ Sbjct: 423 AWHPKENIIAVATTNNLYIF 442
>VPX_HV2RO (P06939) VPX protein (X ORF protein) (Viral accessory protein)| Length = 112 Score = 31.2 bits (69), Expect = 2.8 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -2 Query: 551 LCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSI 417 LC ++ A++M K C L G G GGW PG PP P + Sbjct: 72 LCIIQ-KAVYMHVRKGCTCLGR----GHGPGGWRPGPPPPPPPGL 111
>2ABA_PIG (Q29090) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) (Fragmen Length = 426 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP EN IA A N+LY++ Sbjct: 402 AWHPKENIIAVATTNNLYIF 421
>2ABD_RAT (P56932) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform) Length = 453 Score = 30.8 bits (68), Expect = 3.7 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP E+ IA AA N+LY++ Sbjct: 429 AWHPMESIIAVAATNNLYIF 448
>2ABD_MOUSE (Q925E7) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform) Length = 453 Score = 30.8 bits (68), Expect = 3.7 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -2 Query: 653 AWHPTENSIACAAGNSLYMY 594 AWHP E+ IA AA N+LY++ Sbjct: 429 AWHPMESIIAVAATNNLYIF 448
>VPX_HV2D1 (P17760) VPX protein (X ORF protein) (Viral accessory protein)| Length = 112 Score = 29.6 bits (65), Expect = 8.2 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = -2 Query: 566 FTVFGLCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSI 417 +T + + A+++ +K C L G G GGW PG PP P + Sbjct: 66 YTKYRYLCIMQKAVYIHFKKGCTCLGR----GHGPGGWRPGPPPPPPPGL 111
>GRK4_RAT (P70507) G protein-coupled receptor kinase 4 (EC 2.7.11.16) (G| protein-coupled receptor kinase GRK4) Length = 575 Score = 29.6 bits (65), Expect = 8.2 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = +2 Query: 188 WLNLARRHYITLDEEKRKFLTSTVSRYFLGPSEIRI 295 +L+ A + +T++EE+R+F S SR+F SE+ + Sbjct: 82 FLDAAAEYEVTIEEEQREFGLSIYSRFFKENSEVSL 117
>ROL6_CAEEL (P20784) Cuticle collagen rol-6 (Protein roller-6)| Length = 348 Score = 29.6 bits (65), Expect = 8.2 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +1 Query: 430 GGYPSPGCQPPLPTPN 477 GGY + G QPP PTPN Sbjct: 75 GGYGATGVQPPAPTPN 90 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,954,594 Number of Sequences: 219361 Number of extensions: 2307301 Number of successful extensions: 5710 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5410 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5709 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
