| Clone Name | rbaal3e19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast ... | 31 | 0.002 | 2 | ALFC_PEA (Q01516) Fructose-bisphosphate aldolase 1, chloroplast ... | 30 | 1.5 | 3 | ALFC_SPIOL (P16096) Fructose-bisphosphate aldolase, chloroplast ... | 26 | 2.7 | 4 | METX_COREF (Q8FRT0) Homoserine O-acetyltransferase (EC 2.3.1.31)... | 28 | 7.3 |
|---|
>ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC| 4.1.2.13) (ALDP) Length = 388 Score = 31.2 bits (69), Expect(2) = 0.002 Identities = 14/18 (77%), Positives = 14/18 (77%) Frame = -1 Query: 310 DGEAAAAKENMFVKXYSY 257 DGEAA AKE MFVK Y Y Sbjct: 371 DGEAAEAKEGMFVKNYVY 388 Score = 27.3 bits (59), Expect(2) = 0.002 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -3 Query: 350 KANSLAQLGKYT 315 KANSLAQLGKYT Sbjct: 358 KANSLAQLGKYT 369
>ALFC_PEA (Q01516) Fructose-bisphosphate aldolase 1, chloroplast precursor| (EC 4.1.2.13) (Fragment) Length = 356 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -1 Query: 313 GDGEAAAAKENMFVKXYSY 257 GDGE+ AK+ +FVK YSY Sbjct: 338 GDGESEEAKKELFVKGYSY 356
>ALFC_SPIOL (P16096) Fructose-bisphosphate aldolase, chloroplast precursor (EC| 4.1.2.13) Length = 394 Score = 26.2 bits (56), Expect(2) = 2.7 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = -3 Query: 350 KANSLAQLGKYT 315 K+NSLAQLGKYT Sbjct: 363 KSNSLAQLGKYT 374 Score = 21.6 bits (44), Expect(2) = 2.7 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = -1 Query: 313 GDGEAAAAKENMFVK 269 G+GE+ K++MFVK Sbjct: 375 GEGESEERKKDMFVK 389
>METX_COREF (Q8FRT0) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine| O-trans-acetylase) (Homoserine transacetylase) (HTA) Length = 377 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +2 Query: 245 ADGSVAVXLDEHVLFGSCGLAVXWC 319 ADGS V L EH L G A WC Sbjct: 43 ADGSTNVVLIEHALTGDSNAADWWC 67 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,607,575 Number of Sequences: 219361 Number of extensions: 657258 Number of successful extensions: 1217 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1207 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1217 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)