ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3e19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate al... 147 3e-32
2gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 96 9e-17
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 96 9e-17
4dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 9e-17
5dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 9e-17
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 96 9e-17
7dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolas... 96 9e-17
8gb|AY103557.1| Zea mays PCO070710 mRNA sequence 92 1e-15
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 82 1e-12
11emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 82 1e-12
12dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 5e-12
13gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds 80 5e-12
14ref|NM_126176.2| Arabidopsis thaliana fructose-bisphosphate aldo... 42 1.2
15gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map... 42 1.2
16gb|AF325014.2|AF325014 Arabidopsis thaliana At2g01140 (At2g01140... 42 1.2
17emb|BX820093.1|CNS0A9H9 Arabidopsis thaliana Full-length cDNA Co... 42 1.2
18emb|BX821886.1|CNS0A9AM Arabidopsis thaliana Full-length cDNA Co... 42 1.2
19emb|BX820040.1|CNS0A9FV Arabidopsis thaliana Full-length cDNA Co... 42 1.2
20emb|BX819026.1|CNS0A82R Arabidopsis thaliana Full-length cDNA Co... 42 1.2
21gb|AY086203.1| Arabidopsis thaliana clone 22418 mRNA, complete s... 42 1.2
22gb|AF537127.1| Camellia sinensis beta-1,3-glucosidase-like mRNA,... 42 1.2
23gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H... 40 4.7
24gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 4.7
25gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete... 40 4.7
26emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in ... 40 4.7
27ref|NM_173273.1| Danio rerio digestive-organ expansion factor (d... 40 4.7
28gb|AF506211.1| Danio rerio DJ434O14.5-like protein mRNA, complet... 40 4.7
29gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like ... 40 4.7
30gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, re... 40 4.7
31gb|BC058062.1| Danio rerio digestive-organ expansion factor, mRN... 40 4.7
32gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 ... 40 4.7 
>gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1577

 Score =  147 bits (74), Expect = 3e-32
 Identities = 96/101 (95%), Gaps = 2/101 (1%)
 Strand = Plus / Minus

                                                                        
Query: 111  gtccatctcttccatcagagctggtctcgacctgtaa-caacgacgacacactggctggc 169
            |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 1400 gtccatctct-ccatcagagctggtctcgacctgtaaacaacgaggacacactgcctggc 1342

                                                     
Query: 170  taaggngccctcaagctgctcaaggcgctactagcactctc 210
            ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1341 taaggtgccctcaagctgctcaaggcgctactagcactctc 1301



 Score =  131 bits (66), Expect = 2e-27
 Identities = 92/100 (92%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                        
Query: 252  gatcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgtcn 311
            ||||||||||||||| ||||||||||||||  ||| ||||| || |||||||||||||| 
Sbjct: 1267 gatcagtagctgtagttcttgacgaacatgccctccttggcggccgcggcctcgccgtcg 1208

                                                    
Query: 312  cctggtgtacttgccgagctgcgccagggagttggccttg 351
            | ||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 c-tggtgtacttgccgagctgcgccagggagttggccttg 1169



 Score = 46.1 bits (23), Expect = 0.076
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 42   gcgaatacagcagtaaaaccattccaa 68
            |||| ||||||||||||||||||||||
Sbjct: 1468 gcgagtacagcagtaaaaccattccaa 1442
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 89/102 (87%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                         
Query: 250   cggatcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgt 309
             ||||| |||||  |||| ||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 63349 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 63408

                                                       
Query: 310   cncctggtgtacttgccgagctgcgccagggagttggccttg 351
             | | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 63409 cgc-tggtgtacttgccgagctgcgccagcgagttggccttg 63449
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 89/102 (87%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                           
Query: 250     cggatcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgt 309
               ||||| |||||  |||| ||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 3469394 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 3469453

                                                         
Query: 310     cncctggtgtacttgccgagctgcgccagggagttggccttg 351
               | | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 3469454 cgc-tggtgtacttgccgagctgcgccagcgagttggccttg 3469494
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>dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C04, full
            insert sequence
          Length = 1492

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 89/102 (87%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                        
Query: 250  cggatcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgt 309
            ||||| |||||  |||| ||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 1265 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 1206

                                                      
Query: 310  cncctggtgtacttgccgagctgcgccagggagttggccttg 351
            | | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 1205 cgc-tggtgtacttgccgagctgcgccagcgagttggccttg 1165
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>dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O18, full
            insert sequence
          Length = 1622

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 89/102 (87%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                        
Query: 250  cggatcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgt 309
            ||||| |||||  |||| ||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 1261 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 1202

                                                      
Query: 310  cncctggtgtacttgccgagctgcgccagggagttggccttg 351
            | | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 1201 cgc-tggtgtacttgccgagctgcgccagcgagttggccttg 1161
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 89/102 (87%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                           
Query: 250     cggatcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgt 309
               ||||| |||||  |||| ||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 3478098 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 3478157

                                                         
Query: 310     cncctggtgtacttgccgagctgcgccagggagttggccttg 351
               | | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 3478158 cgc-tggtgtacttgccgagctgcgccagcgagttggccttg 3478198
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>dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolase, complete cds, clone:Aldp
          Length = 2915

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 89/102 (87%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                        
Query: 250  cggatcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgt 309
            ||||| |||||  |||| ||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 2793 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 2734

                                                      
Query: 310  cncctggtgtacttgccgagctgcgccagggagttggccttg 351
            | | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 2733 cgc-tggtgtacttgccgagctgcgccagcgagttggccttg 2693
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>gb|AY103557.1| Zea mays PCO070710 mRNA sequence
          Length = 1761

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 84/96 (87%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                        
Query: 256  agtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgtcncctg 315
            ||||||||||| |||||||||||||   ||| |||||  | ||||||||||||||    |
Sbjct: 1404 agtagctgtagttcttgacgaacattccctccttggcctcggcggcctcgccgtcgga-g 1346

                                                
Query: 316  gtgtacttgccgagctgcgccagggagttggccttg 351
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1345 gtgtacttgccgagctgcgccagggagttggccttg 1310
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 79/91 (86%), Gaps = 1/91 (1%)
 Strand = Plus / Minus

                                                                           
Query: 254     tcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgtcncc 313
               ||||||| ||||| ||||||||||||||  |||  ||||  | |||||||||||||| | 
Sbjct: 3543513 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgc- 3543455

                                              
Query: 314     tggtgtacttgccgagctgcgccagggagtt 344
               ||||||||||||||||||||||||| |||||
Sbjct: 3543454 tggtgtacttgccgagctgcgccagcgagtt 3543424
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 79/91 (86%), Gaps = 1/91 (1%)
 Strand = Plus / Minus

                                                                           
Query: 254     tcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgtcncc 313
               ||||||| ||||| ||||||||||||||  |||  ||||  | |||||||||||||| | 
Sbjct: 3543458 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgc- 3543400

                                              
Query: 314     tggtgtacttgccgagctgcgccagggagtt 344
               ||||||||||||||||||||||||| |||||
Sbjct: 3543399 tggtgtacttgccgagctgcgccagcgagtt 3543369
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>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 79/91 (86%), Gaps = 1/91 (1%)
 Strand = Plus / Minus

                                                                         
Query: 254   tcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgtcncc 313
             ||||||| ||||| ||||||||||||||  |||  ||||  | |||||||||||||| | 
Sbjct: 58441 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgc- 58383

                                            
Query: 314   tggtgtacttgccgagctgcgccagggagtt 344
             ||||||||||||||||||||||||| |||||
Sbjct: 58382 tggtgtacttgccgagctgcgccagcgagtt 58352
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>dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A10, full
            insert sequence
          Length = 2135

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                   
Query: 297  gcggcctcgccgtcncctggtgtacttgccgagctgcgccagggagttggccttg 351
            |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 1209 gcggcctcgccgtcgc-tggtgtacttgccgagctgcgccagcgagttggccttg 1156
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>gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds
          Length = 1302

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 87/102 (85%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                        
Query: 250  cggatcagtagctgtagntcttgacgaacatgttctctttggcagctgcggcctcgccgt 309
            ||||| |||||  |||| ||||||||||||||   || |||||  | ||||| |||||||
Sbjct: 1157 cggattagtagacgtagttcttgacgaacatgccttccttggcctcggcggcttcgccgt 1098

                                                      
Query: 310  cncctggtgtacttgccgagctgcgccagggagttggccttg 351
            | | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 1097 cgc-tggtgtacttgccgagctgcgccagcgagttggccttg 1057
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>ref|NM_126176.2| Arabidopsis thaliana fructose-bisphosphate aldolase AT2G01140 mRNA,
            complete cds
          Length = 1515

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 322  ttgccgagctgcgccagggagttggcctt 350
            ||||||||||| ||||| |||||||||||
Sbjct: 1253 ttgccgagctgggccagtgagttggcctt 1225
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>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete
            sequence
          Length = 94029

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 322  ttgccgagctgcgccagggagttggcctt 350
            ||||||||||| ||||| |||||||||||
Sbjct: 4669 ttgccgagctgggccagtgagttggcctt 4697
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>gb|AF325014.2|AF325014 Arabidopsis thaliana At2g01140 (At2g01140/F10A8.2) mRNA, complete cds
          Length = 1470

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 322  ttgccgagctgcgccagggagttggcctt 350
            ||||||||||| ||||| |||||||||||
Sbjct: 1207 ttgccgagctgggccagtgagttggcctt 1179
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>emb|BX820093.1|CNS0A9H9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS72ZH02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1377

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 322  ttgccgagctgcgccagggagttggcctt 350
            ||||||||||| ||||| |||||||||||
Sbjct: 1195 ttgccgagctgggccagtgagttggcctt 1167
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>emb|BX821886.1|CNS0A9AM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL81ZH02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 329

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 322 ttgccgagctgcgccagggagttggcctt 350
           ||||||||||| ||||| |||||||||||
Sbjct: 88  ttgccgagctgggccagtgagttggcctt 60
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>emb|BX820040.1|CNS0A9FV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS67ZB05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1391

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 322  ttgccgagctgcgccagggagttggcctt 350
            ||||||||||| ||||| |||||||||||
Sbjct: 1187 ttgccgagctgggccagtgagttggcctt 1159
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>emb|BX819026.1|CNS0A82R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB38ZH11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 262

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 322 ttgccgagctgcgccagggagttggcctt 350
           ||||||||||| ||||| |||||||||||
Sbjct: 37  ttgccgagctgggccagtgagttggcctt 9
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>gb|AY086203.1| Arabidopsis thaliana clone 22418 mRNA, complete sequence
          Length = 1469

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 322  ttgccgagctgcgccagggagttggcctt 350
            ||||||||||| ||||| |||||||||||
Sbjct: 1207 ttgccgagctgggccagtgagttggcctt 1179
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>gb|AF537127.1| Camellia sinensis beta-1,3-glucosidase-like mRNA, partial sequence
          Length = 584

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 315 ggtgtacttgccgagctgcgccagggagttggc 347
           ||||||||||||||| || ||||| ||||||||
Sbjct: 305 ggtgtacttgccgagttgagccagagagttggc 273
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>gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H14, complete sequence
          Length = 118437

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   acatgttctctttggcagct 296
             ||||||||||||||||||||
Sbjct: 27603 acatgttctctttggcagct 27584
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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    acatgttctctttggcagct 296
              ||||||||||||||||||||
Sbjct: 323939 acatgttctctttggcagct 323958
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>gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete sequence
          Length = 168850

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aacaaaggcaacaacaacgc 20
              ||||||||||||||||||||
Sbjct: 155801 aacaaaggcaacaacaacgc 155820
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>emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in linkage group 13,
             complete sequence
          Length = 89710

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    gcagtaaaaccattccaaag 70
             ||||||||||||||||||||
Sbjct: 12372 gcagtaaaaccattccaaag 12353
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>ref|NM_173273.1| Danio rerio digestive-organ expansion factor (def), mRNA
          Length = 2445

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   gcagtaaaaccattccaaag 70
            ||||||||||||||||||||
Sbjct: 1694 gcagtaaaaccattccaaag 1713
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>gb|AF506211.1| Danio rerio DJ434O14.5-like protein mRNA, complete cds
          Length = 2445

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   gcagtaaaaccattccaaag 70
            ||||||||||||||||||||
Sbjct: 1694 gcagtaaaaccattccaaag 1713
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>gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like protein mRNA,
            complete cds
          Length = 1552

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 316  gtgtacttgccgagctgcgccagggagttggccttg 351
            ||||||||||| ||||| || || ||||||||||||
Sbjct: 1260 gtgtacttgccaagctgagcaagtgagttggccttg 1225
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>gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, region 13C-13E, BAC clone
              BACR36D15, complete sequence
          Length = 159513

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aacaaaggcaacaacaacgc 20
              ||||||||||||||||||||
Sbjct: 129529 aacaaaggcaacaacaacgc 129510
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>gb|BC058062.1| Danio rerio digestive-organ expansion factor, mRNA (cDNA clone
            MGC:63753 IMAGE:2640310), complete cds
          Length = 2466

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   gcagtaaaaccattccaaag 70
            ||||||||||||||||||||
Sbjct: 1673 gcagtaaaaccattccaaag 1692
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>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete
             sequence
          Length = 300896

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aacaaaggcaacaacaacgc 20
             ||||||||||||||||||||
Sbjct: 87427 aacaaaggcaacaacaacgc 87408


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,467,543
Number of Sequences: 3902068
Number of extensions: 2467543
Number of successful extensions: 52553
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52431
Number of HSP's gapped (non-prelim): 104
length of query: 352
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 330
effective length of database: 17,147,199,772
effective search space: 5658575924760
effective search space used: 5658575924760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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