ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2p10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NELL1_HUMAN (Q92832) Protein kinase C-binding protein NELL1 prec... 30 7.3
2CYAE_BORPE (P11092) Protein cyaE precursor 29 9.6

>NELL1_HUMAN (Q92832) Protein kinase C-binding protein NELL1 precursor (NEL-like|
           protein 1) (Nel-related protein 1)
          Length = 810

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 278 CMDSYPGARISGVVLSLIGSPDHVCQ 201
           C+DSY  +R+SG V ++ GSP   C+
Sbjct: 767 CLDSYGVSRLSGSVWTMAGSPCTTCK 792



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>CYAE_BORPE (P11092) Protein cyaE precursor|
          Length = 474

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +1

Query: 232 DSTTPLILAPG*LSMQWLQQPQLA*YMHESR 324
           D  TP++LAPG L+ Q ++  +LA ++ ++R
Sbjct: 252 DPATPIVLAPGPLAPQRIEDRELAQWLRDAR 282


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,324,931
Number of Sequences: 219361
Number of extensions: 1681300
Number of successful extensions: 3361
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3360
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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