ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal2p06 |
|---|---|
| Clone Library Name | barley_pub |
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 40.0 bits (92), Expect = 0.007 Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 13/144 (9%) Frame = -3 Query: 566 IKEAVSKLDSAAKEKQELLALVDALQSQIQRQEAST----KLICEERSELCSSSKHMDMD 399 +K + +KL A + + ++A D S+ + +T + +E+ +S D Sbjct: 148 LKSSENKLKKATEYYENIIAQYDRQDSESVSRVFNTADDDSNVKKEKQSSTGASSVNDES 207 Query: 398 NDNVDKACLSDTDLIPVAENIVELDDEGVDIRTIGD-----TEWENPHSSEVSDVREV-- 240 NDN DK+ + + A + +E++D I + TEW+N + E+S++R+ Sbjct: 208 NDNSDKSQSNKESAVSQAHHEIEINDLNTQISVLEATVKELTEWKNQNERELSELRQTVA 267 Query: 239 --STEAEENSLDIPVDSQPVAEDT 174 + N L QP A T Sbjct: 268 SNKSALSNNQLQSNSQHQPDASVT 291
>NALP5_HUMAN (P59047) NACHT-, LRR- and PYD-containing protein 5 (Mater protein| homolog) Length = 1200 Score = 35.0 bits (79), Expect = 0.23 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +3 Query: 162 LALESILSNWLAINRNIQTVFFSFC-AHLPYIRYFR 266 LAL S WL IN+N+ + SFC H PY+R R Sbjct: 702 LALNSFQEVWLPINQNLDLIASSFCLQHCPYLRKIR 737
>ZFY2_MOUSE (P20662) Zinc finger Y-chromosomal protein 2| Length = 783 Score = 33.5 bits (75), Expect = 0.68 Identities = 29/99 (29%), Positives = 46/99 (46%) Frame = -3 Query: 470 EASTKLICEERSELCSSSKHMDMDNDNVDKACLSDTDLIPVAENIVELDDEGVDIRTIGD 291 E S+++ SE SS +D + V K C+ D E+DD G I+ + + Sbjct: 214 EGSSEVTMNAESETDSSK--LDEASPEVIKVCILKADS--------EVDDVGETIQAV-E 262 Query: 290 TEWENPHSSEVSDVREVSTEAEENSLDIPVDSQPVAEDT 174 +E +N + +EV+D R + N + DSQ EDT Sbjct: 263 SETDNGNEAEVTDQRTSIHVPKVNIYMLASDSQKEEEDT 301
>BUD27_YEAST (P43573) Bud site selection protein 27| Length = 796 Score = 33.5 bits (75), Expect = 0.68 Identities = 21/72 (29%), Positives = 31/72 (43%) Frame = -3 Query: 530 KEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSKHMDMDNDNVDKACLSDTDLIP 351 K K+E + VD ++ L EE + + HM+ N + +D D +P Sbjct: 79 KTKEEAITFVDDKLKLMEDAIEQFNLKIEEAKKTLDNLNHMEDGNGIEEDEANNDEDFLP 138 Query: 350 VAENIVELDDEG 315 E ELDDEG Sbjct: 139 SMEIREELDDEG 150
>LEPA_THEMA (Q9X1V8) GTP-binding protein lepA| Length = 621 Score = 33.5 bits (75), Expect = 0.68 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = -3 Query: 512 LALVDALQSQIQRQEASTKLICEERSELCSSSKHMDMDNDNVDKACLSDTDLIPVAENIV 333 + LVDA Q + A T L E E+ +D+ N N+++ L DL+ V+EN + Sbjct: 118 ILLVDATQGVEAQTVAHTYLAIEHDLEIIPVINKIDLPNANIEETALEIKDLLGVSENEI 177 Query: 332 EL 327 L Sbjct: 178 LL 179
>PROA_CHRVO (Q7NQ51) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 419 Score = 32.7 bits (73), Expect = 1.2 Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 6/88 (6%) Frame = -3 Query: 572 MRIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSKHMD---- 405 M +KE + +L AA++ LLA D Q + ++ E+ + L ++ + +D Sbjct: 1 MNVKEYMQQLGQAARKASRLLARADTNQKNAALHAIADAIVREQEALLAANRQDLDAARQ 60 Query: 404 --MDNDNVDKACLSDTDLIPVAENIVEL 327 +D+ +D+ LS ++ +A+ + ++ Sbjct: 61 AGLDDAMLDRLTLSAKGVLAMADGLRQI 88
>SWR1_GIBZE (Q4IAK7) Helicase SWR1 (EC 3.6.1.-)| Length = 1691 Score = 32.7 bits (73), Expect = 1.2 Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 7/143 (4%) Frame = -3 Query: 581 DADMRIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSKHMDM 402 D++M EAVS + A + + L+ + D + E STK EE+ ++ ++ + + Sbjct: 643 DSEMPDVEAVSDGEGAEENEMSLIQMPDPEPHESGALEKSTKEAVEEKEQIPAAMQDVAA 702 Query: 401 DNDNVDKACLSDTDLIPVAENIVELDDEGVDIRTIGD-------TEWENPHSSEVSDVRE 243 D LS+TD N+ E + D+ G+ +E PHS Sbjct: 703 GQDG-----LSNTD-----NNVQEPASQDNDVAMTGNDPEEPSALTFEKPHSPATEPATN 752 Query: 242 VSTEAEENSLDIPVDSQPVAEDT 174 + S +++P DT Sbjct: 753 PPSRVHSTSPPATSETKPSELDT 775
>ZN645_MACFA (Q4R361) Zinc finger protein 645| Length = 422 Score = 32.7 bits (73), Expect = 1.2 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 4/84 (4%) Frame = +2 Query: 119 FTSSHG---VQERQKAQPSLGKYPQQLAGYQQEYPNCFLQLLCSPPLHQILQRNEDFPTP 289 FT HG V Q S K P YP Q + S P H + Q+ P P Sbjct: 228 FTRKHGNLIVDHIQNNSDSGAKKPSP----PDYYPEYQSQPVVSSPCHIMPQKQHYAPPP 283 Query: 290 CPRS-YEYPLPRHPTQLCSPQRVS 358 P S YP+P P + +P VS Sbjct: 284 SPSSPVNYPMPYPPQDVGTPNLVS 307
>CENPE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)| Length = 2663 Score = 32.7 bits (73), Expect = 1.2 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Frame = -3 Query: 569 RIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSKHMDMDND- 393 R++E+ ++ S AKEK +L L + LQS+ + + + K I +KH++ + + Sbjct: 1429 RLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIV---------AKHLETEEEL 1479 Query: 392 NVDKACLSDTDLIPVAENIVELDDEGVDIRTI 297 V CL + + + E V L ++ +I TI Sbjct: 1480 KVAHCCLKEQE-ETINELRVNLSEKETEISTI 1510
>MY18A_HUMAN (Q92614) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain)| (Molecule associated with JAK3 N-terminus) (MAJN) Length = 2054 Score = 32.0 bits (71), Expect = 2.0 Identities = 31/149 (20%), Positives = 64/149 (42%), Gaps = 15/149 (10%) Frame = -3 Query: 569 RIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEAS---TKLICEERSELCSSSKHMDMD 399 +I + ++L+ A KEKQEL + ALQSQ++ E S L+ + +++ ++ + Sbjct: 1775 QINDLQAQLEEANKEKQELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFE 1834 Query: 398 NDNVDKACLSDTDLIPVAENIVELDDEGVDI------------RTIGDTEWENPHSSEVS 255 V + + L E + E D+ + R + DT+ E + Sbjct: 1835 RTQVKRLESLASRLKENMEKLTEERDQRIAAENREKEQNKRLQRQLRDTKEEMGELAR-- 1892 Query: 254 DVREVSTEAEENSLDIPVDSQPVAEDTFQ 168 +E +++ L++ ++S A + Q Sbjct: 1893 --KEAEASRKKHELEMDLESLEAANQSLQ 1919 Score = 29.6 bits (65), Expect = 9.8 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = -3 Query: 575 DMRIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSKHMDMD 399 D I++ SKL+ A KE+ EL D L+S+I T + +ER+ S+S+ +D + Sbjct: 1260 DEEIQQLRSKLEKAEKERNELRLNSDRLESRISE---LTSELTDERNTGESASQLLDAE 1315
>SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)| Length = 1772 Score = 32.0 bits (71), Expect = 2.0 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 5/123 (4%) Frame = -3 Query: 527 EKQELLALVDALQSQIQRQEASTKLICEERS--ELCSS---SKHMDMDNDNVDKACLSDT 363 EK+E+ A+ D S + ++ ++ + R EL +K+ +DN V++A D Sbjct: 673 EKEEVEAVSDDAMSDVDMEDDREQVEVDTRDDDELTVEELRAKYAALDNIKVERAEEED- 731 Query: 362 DLIPVAENIVELDDEGVDIRTIGDTEWENPHSSEVSDVREVSTEAEENSLDIPVDSQPVA 183 E D+E D + E E +E+ + E +T A E +D P + + Sbjct: 732 ----------EEDEENGD----DEDEDEEEDDAEIEEETETTTPALETPIDTPAEEDEFS 777 Query: 182 EDT 174 DT Sbjct: 778 SDT 780
>MAD_MOUSE (P50538) MAD protein (MAX dimerizer) (MAX dimerization protein 1)| Length = 227 Score = 32.0 bits (71), Expect = 2.0 Identities = 30/107 (28%), Positives = 51/107 (47%) Frame = -3 Query: 563 KEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSKHMDMDNDNVD 384 ++AV ++D +E++ L ++ L ++ R ++ ++ ERS+ S + +D+D D VD Sbjct: 112 RKAVHQIDQLQREQRHLKRRLEKLGAERTRMDSVGSVVSSERSD--SDREELDVDVD-VD 168 Query: 383 KACLSDTDLIPVAENIVELDDEGVDIRTIGDTEWENPHSSEVSDVRE 243 V++D EG D GD W SS VSD E Sbjct: 169 ----------------VDVDVEGTDYLN-GDLGW----SSSVSDSDE 194
>Y787_METJA (Q58197) Hypothetical protein MJ0787| Length = 504 Score = 31.6 bits (70), Expect = 2.6 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 7/130 (5%) Frame = -3 Query: 566 IKEAVSKLDSAAKEKQELLALVDALQSQ----IQRQEASTKLICEERSELCSSSKHMDMD 399 IKEAV+ LDSA + ++ ++ ++ + + I+ +A L EE +L S+ + M Sbjct: 5 IKEAVNSLDSALELRKLIIKKLNEKKLKESDIIEIVDAVDDLSLEEIQKLGSNLRTFPMG 64 Query: 398 NDNVDKA---CLSDTDLIPVAENIVELDDEGVDIRTIGDTEWENPHSSEVSDVREVSTEA 228 D V+ A C S LI EN + D G I + + + + Sbjct: 65 CDLVEIAVGPCSSSLTLIQFIENCILTDYMGFPIHICSYAVADIAEKEGLKPIEVLKMVL 124 Query: 227 EENSLDIPVD 198 E ++D+P+D Sbjct: 125 E--NVDVPID 132
>ZWINT_RAT (Q8VIL3) ZW10 interactor (ZW10-interacting protein 1) (Zwint-1)| (SNAP25-interacting protein 30) Length = 266 Score = 31.2 bits (69), Expect = 3.4 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = -3 Query: 569 RIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSEL-CSSSKHMDMD 399 R K A+ KLD + +E + L Q ++QR ++ +L+C +++L S SK D D Sbjct: 198 RRKRALEKLDGSHQELETLKQQAGQEQEKLQRNQSYLQLLCSLQNKLVISESKADDKD 255
>OSBL8_HUMAN (Q9BZF1) Oxysterol-binding protein-related protein 8 (OSBP-related| protein 8) (ORP-8) Length = 889 Score = 31.2 bits (69), Expect = 3.4 Identities = 20/90 (22%), Positives = 42/90 (46%) Frame = -3 Query: 488 SQIQRQEASTKLICEERSELCSSSKHMDMDNDNVDKACLSDTDLIPVAENIVELDDEGVD 309 S+I+RQ + + ++S+ + +H + DN+ + K+ SDTD ++ + Sbjct: 314 SEIERQHFKDQDMYSDKSDKENDQEHDESDNEVMGKSEESDTDTSERQDDSYIEPEPVEP 373 Query: 308 IRTIGDTEWENPHSSEVSDVREVSTEAEEN 219 ++ TE + E + + T +EEN Sbjct: 374 LKETTYTEQSHEELGEAGEASQTETVSEEN 403
>TAXB1_RAT (Q66HA4) Tax1-binding protein 1 homolog (Liver regeneration-related| protein LRRG004) Length = 813 Score = 31.2 bits (69), Expect = 3.4 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 22/99 (22%) Frame = -3 Query: 548 KLDSAAKEKQELLALVDALQSQ----------IQRQEASTKLICE----ERSELCSSSKH 411 K++ KEK+ELL LV L+ + ++R+ + K CE E+ L S+ Sbjct: 153 KIEKTLKEKEELLKLVSVLEKETAQLREQVGRMERELSHEKSRCEQLQAEQKGLLEVSQS 212 Query: 410 MDMDN--------DNVDKACLSDTDLIPVAENIVELDDE 318 + ++N D KA + D++ V VE + E Sbjct: 213 LRVENEEFMKRYSDATSKAHQLEEDIVSVTHKAVEKETE 251
>CPSF2_HUMAN (Q9P2I0) Cleavage and polyadenylation specificity factor, 100 kDa| subunit (CPSF 100 kDa subunit) Length = 782 Score = 31.2 bits (69), Expect = 3.4 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -3 Query: 527 EKQELLALVDALQSQIQR-QEASTKLICEERSELCSSSKHMDMDNDNVDKACLSDTDLIP 351 E E++ D L ++Q +E +KL S L + + MD D +V C+S T+ I Sbjct: 475 EYGEIIKPEDFLVPELQATEEEKSKL----ESGLTNGDEPMDQDLSDVPTKCISTTESIE 530 Query: 350 VAENIVELDDEGVDIRTIGDT 288 + + +D EG R+ GD+ Sbjct: 531 IKARVTYIDYEG---RSDGDS 548
>CPSF2_BOVIN (Q10568) Cleavage and polyadenylation specificity factor, 100 kDa| subunit (CPSF 100 kDa subunit) Length = 782 Score = 31.2 bits (69), Expect = 3.4 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -3 Query: 527 EKQELLALVDALQSQIQR-QEASTKLICEERSELCSSSKHMDMDNDNVDKACLSDTDLIP 351 E E++ D L ++Q +E +KL S L + + MD D +V C+S T+ I Sbjct: 475 EYGEIIKPEDFLVPELQATEEEKSKL----ESGLTNGDEPMDQDLSDVPTKCISTTESIE 530 Query: 350 VAENIVELDDEGVDIRTIGDT 288 + + +D EG R+ GD+ Sbjct: 531 IKARVTYIDYEG---RSDGDS 548
>EI2BE_YEAST (P32501) Translation initiation factor eIF-2B epsilon subunit| (eIF-2B GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCD6) (GCD complex subunit GCD6) Length = 712 Score = 31.2 bits (69), Expect = 3.4 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Frame = -3 Query: 332 ELDDEGVDIRTIGDTEWENPHSSEVSDVREVSTEA--EENSLDIPVDSQPVAEDT 174 +LDD+ + + +GD + SEVSD + STEA E N+L +D +++D+ Sbjct: 456 DLDDQTLAVSIVGDKGVGYIYESEVSDDEDSSTEACKEINTLSNQLDELYLSDDS 510
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 30.8 bits (68), Expect = 4.4 Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 1/137 (0%) Frame = +1 Query: 154 GPA*PWKVSSATGWLSTGISKLFSSASVLTSLTSDTSEE*GFSHSVSPIVRIXXXXXXXX 333 GP+ VSS+ S+ +S + SS S +S SD S S S S + Sbjct: 84 GPSSSSVVSSSVSQSSSSVSDVSSSVSQSSSSASDVSS--SVSQSASSTSDVSSSVSQSS 141 Query: 334 XXXXXXGIRSVSLKQALSTLS-LSMSMCFELEHSSDLSSQISFVLASCLCICDCRASTRA 510 S S+ Q+ S+ S +S S+ +SD+SS +S +S + + + + Sbjct: 142 SSASDV---SSSVSQSSSSASDVSSSVSQSASSASDVSSSVSQSASSTSDVSSSVSQSSS 198 Query: 511 KSSCFSFAAESSLLTAS 561 +S S + S +AS Sbjct: 199 SASDVSSSVSQSSSSAS 215
>RAD50_ARCFU (O29230) DNA double-strand break repair rad50 ATPase| Length = 886 Score = 30.8 bits (68), Expect = 4.4 Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 5/124 (4%) Frame = -3 Query: 569 RIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSKHMDMDNDN 390 R+KE +S+ + ++K+E A ++ + +I+ E+ + + EE L S K ++ Sbjct: 174 RLKEFLSQEEQIKRQKEEKKAEIERISEEIKSIESLREKLSEEVRNLESRLKELEEHKSR 233 Query: 389 VDKACLSDTDLIP----VAENIVELDDEGVD-IRTIGDTEWENPHSSEVSDVREVSTEAE 225 ++ ++ ++ + E + EL+ + + + I D E + +V+E+ +AE Sbjct: 234 LESLRKQESSVLQEVRGLEEKLRELEKQLKEVVERIEDLE------KKAKEVKELKPKAE 287 Query: 224 ENSL 213 S+ Sbjct: 288 RYSI 291
>ZN645_HUMAN (Q8N7E2) Zinc finger protein 645| Length = 425 Score = 30.8 bits (68), Expect = 4.4 Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 4/83 (4%) Frame = +2 Query: 119 FTSSHG---VQERQKAQPSLGKYPQQLAGYQQEYPNCFLQLLCSPPLHQILQRNEDFPTP 289 FT HG V Q S K P YP C Q S P H I Q+ P P Sbjct: 231 FTRKHGNLTVDHIQNNSDSGAKKPTP----PDYYPECQSQPAVSSPHHIIPQKQHYAPPP 286 Query: 290 CPRS-YEYPLPRHPTQLCSPQRV 355 P S + +P P + +P V Sbjct: 287 SPSSPVNHQMPYPPQDVVTPNSV 309
>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa| Golgi complex-associated protein) (GCP372) Length = 3259 Score = 30.8 bits (68), Expect = 4.4 Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 35/154 (22%) Frame = -3 Query: 575 DMRIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEAS-------TKLICEERSELCSSS 417 D++I+ ++LD + E L+ +LQSQ+Q +E+ + I + EL + Sbjct: 809 DVKIEVLQNELDDVQLQFSEQSTLIRSLQSQLQNKESEVLEGAERVRHISSKVEELSQAL 868 Query: 416 KHMDMDNDNVDKACLS---DTDLI----------------PVAENIVELDDE----GVDI 306 +++ +D+ L D + + + E +V+L++E GV+I Sbjct: 869 SQKELEITKMDQLLLEKKRDVETLQQTIEEKDQQVTEISFSMTEKMVQLNEEKFSLGVEI 928 Query: 305 RTIGD-----TEWENPHSSEVSDVREVSTEAEEN 219 +T+ + + E +V + EVS+ ++N Sbjct: 929 KTLKEQLNLLSRAEEAKKEQVEEDNEVSSGLKQN 962
>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein| Eps15) (AF-1p protein) Length = 897 Score = 30.8 bits (68), Expect = 4.4 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = -3 Query: 554 VSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSK 414 + KL + ++ QELL +D ++Q++ Q + C E ++L SS K Sbjct: 384 LQKLQAQKQQVQELLGELDEQKAQLEEQLQEVRKKCAEEAQLISSLK 430
>EP15_HUMAN (P42566) Epidermal growth factor receptor substrate 15 (Protein| Eps15) (AF-1p protein) Length = 896 Score = 30.4 bits (67), Expect = 5.8 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -3 Query: 581 DADMRIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSK 414 D R + KL + ++ QELL +D ++Q++ Q + C E ++L SS K Sbjct: 375 DEVQRENTNLQKLQAQKQQVQELLDELDEQKAQLEEQLKEVRKKCAEEAQLISSLK 430
>OLR1_MOUSE (Q9EQ09) Oxidized low-density lipoprotein receptor 1 (Ox-LDL| receptor 1) (Lectin-type oxidized LDL receptor 1) (Lectin-like oxidized LDL receptor 1) (Lectin-like oxLDL receptor 1) (LOX-1) [Contains: Oxidized low-density lipoprotein receptor 1, Length = 363 Score = 30.4 bits (67), Expect = 5.8 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = -3 Query: 569 RIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTK 456 +I KLD +KE++ELL ++ LQ +QR S++ Sbjct: 150 KIDTITRKLDEKSKEQEELLQMIQNLQEALQRAANSSE 187
>TPM_PERFU (Q8T6L5) Tropomyosin| Length = 284 Score = 30.4 bits (67), Expect = 5.8 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = -3 Query: 569 RIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEE 441 R+KEA ++ + A + Q+L VD L+ ++ ++ K IC++ Sbjct: 231 RLKEAEARAEFAERSVQKLQKEVDRLEDELVHEKEKYKFICDD 273
>TPM_PERAM (Q9UB83) Tropomyosin (Major allergen Per a 7)| Length = 284 Score = 30.4 bits (67), Expect = 5.8 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = -3 Query: 569 RIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEE 441 R+KEA ++ + A + Q+L VD L+ ++ ++ K IC++ Sbjct: 231 RLKEAEARAEFAERSVQKLQKEVDRLEDELVHEKEKYKFICDD 273
>NANE_LISMF (Q71VW2) Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC| 5.1.3.9) (ManNAc-6-P epimerase) Length = 231 Score = 30.4 bits (67), Expect = 5.8 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = -3 Query: 371 SDTDLIPVAENIVELDDEGVDIRTIGDTEWENPHSSEVSDVREVSTEAEENSL 213 SD + P E + E+ + GV+I + T + PH+ ++ D+ + N+L Sbjct: 76 SDVFITPTLEEVREICETGVEIVAMDATTRKRPHNEDLKDILNAIRKEFPNTL 128
>CPSF2_MOUSE (O35218) Cleavage and polyadenylation specificity factor, 100 kDa| subunit (CPSF 100 kDa subunit) Length = 782 Score = 30.4 bits (67), Expect = 5.8 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -3 Query: 527 EKQELLALVDALQSQIQR-QEASTKLICEERSELCSSSKHMDMDNDNVDKACLSDTDLIP 351 E E++ D L ++Q +E +KL S L + + MD D +V C+S T+ I Sbjct: 475 EYGEIIKPEDFLVPELQATEEEKSKL----ESGLTNGEEPMDQDLSDVPTKCVSATESIE 530 Query: 350 VAENIVELDDEGVDIRTIGDT 288 + + +D EG R+ GD+ Sbjct: 531 IKARVTYIDYEG---RSDGDS 548
>TPM3_CAEEL (Q27249) Tropomyosin isoform 3| Length = 256 Score = 30.0 bits (66), Expect = 7.5 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%) Frame = -3 Query: 569 RIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSKHMDMDNDN 390 R+K A SKL+ A K E +++++ Q+ E + + E ++ D + Sbjct: 77 RLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQVDEAKVIAEDADRKYEE 136 Query: 389 V-DKACLSDTDLIPVAE-------NIVELDDEGVDIRTIGDTEWENPHSSEVSDVREVST 234 V K + + DL E IVEL++E +R +G+ N S EVS+ + + Sbjct: 137 VARKLAMVEADLERAEERAEAGENKIVELEEE---LRVVGN----NLKSLEVSEEKALQR 189 Query: 233 E 231 E Sbjct: 190 E 190
>SLK_RAT (O08815) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)| (STE20-like kinase) (STE20-related serine/threonine-protein kinase) (STE20-related kinase) Length = 1206 Score = 30.0 bits (66), Expect = 7.5 Identities = 31/135 (22%), Positives = 60/135 (44%) Frame = -3 Query: 485 QIQRQEASTKLICEERSELCSSSKHMDMDNDNVDKACLSDTDLIPVAENIVELDDEGVDI 306 Q+++Q A +CE ++ S+S+ + + + D + + +I EL+ GV Sbjct: 608 QLEQQSA----VCEGEGQVTSTSESTRATTEEPET---DEVDQVSESNSIEELERLGVTG 660 Query: 305 RTIGDTEWENPHSSEVSDVREVSTEAEENSLDIPVDSQPVAEDTFQG*AGPFAVLVHHDY 126 E S+ E+ E EEN+ ++PV ++P A Q + P VL+ Sbjct: 661 AE------EQALGSKGEAATELDLEREENAQELPVKAEPQAPAASQA-SEPPPVLIPS-- 711 Query: 125 L*KFFLSVHVEHSYN 81 +++H E++ N Sbjct: 712 -----INIHSENTEN 721
>ZWINT_MOUSE (Q9CQU5) ZW10 interactor (ZW10-interacting protein 1) (Zwint-1)| Length = 252 Score = 30.0 bits (66), Expect = 7.5 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -3 Query: 569 RIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSEL-CSSSKHMDMD 399 R K A+ KLD + +E + L Q ++QR ++ +L+C +++L S K D D Sbjct: 182 RRKRALEKLDGSHQELETLKQQAGQEQEKLQRNQSYLQLLCSLQNKLVISEGKAEDKD 239
>CPSF2_XENLA (Q9W799) Cleavage and polyadenylation specificity factor, 100 kDa| subunit (CPSF 100 kDa subunit) Length = 783 Score = 30.0 bits (66), Expect = 7.5 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -3 Query: 527 EKQELLALVDALQSQIQ-RQEASTKLICEERSELCSSSKHMDMDNDNVDKACLSDTDLIP 351 E E++ D L ++Q ++ TKL S L + + MD D +V C+S T+ + Sbjct: 475 EYGEIIKPEDFLVPELQVTEDEKTKL----ESGLTNGDEPMDQDLSDVPTKCVSTTESME 530 Query: 350 VAENIVELDDEGVDIRTIGDT 288 + + +D EG R+ GD+ Sbjct: 531 IKARVTYIDYEG---RSDGDS 548
>MIPO1_HUMAN (Q8TD10) Mirror-image polydactyly gene 1 protein| Length = 442 Score = 30.0 bits (66), Expect = 7.5 Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 5/98 (5%) Frame = -3 Query: 572 MRIKEAVSKLDSAAKEKQELLALVDALQ-SQIQRQEA---STKLICEERSELCSSSKHMD 405 ++ K + + ++ AK ++ ALV+ + +Q +R EA +L EER E + +KHM+ Sbjct: 144 LKFKLELQEKETEAKIAEKTAALVEEVYFAQKERDEAVMSRLQLAIEERDEAIARAKHME 203 Query: 404 MDNDNVDKACLSDTDL-IPVAENIVELDDEGVDIRTIG 294 M ++ + D+ + N + D G+ I+ G Sbjct: 204 MSLKVLENINPEENDMTLQELLNRINNADTGIAIQKNG 241
>TPM_BLAGE (Q9NG56) Tropomyosin| Length = 284 Score = 30.0 bits (66), Expect = 7.5 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = -3 Query: 569 RIKEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEE 441 R+KEA ++ + A + Q+L VD L+ ++ ++ K IC++ Sbjct: 231 RLKEAEARAEFAERSVQKLQKEVDRLEDELVHEKEKYKYICDD 273
>TGA3_ARATH (Q39234) Transcription factor TGA3 (AtbZIP22)| Length = 384 Score = 30.0 bits (66), Expect = 7.5 Identities = 10/36 (27%), Positives = 22/36 (61%) Frame = -3 Query: 284 WENPHSSEVSDVREVSTEAEENSLDIPVDSQPVAED 177 WE+P S+++++ + +S + VD++P A+D Sbjct: 31 WESPFKSDINNITSNQNNNQSSSTTLEVDARPEADD 66
>MOES_MOUSE (P26041) Moesin (Membrane-organizing extension spike protein)| Length = 576 Score = 29.6 bits (65), Expect = 9.8 Identities = 24/122 (19%), Positives = 51/122 (41%), Gaps = 5/122 (4%) Frame = -3 Query: 563 KEAVSKLDSAAKEKQELLALVDALQSQIQRQEASTKLICEERSELCSSSKHMDMDNDNVD 384 K A S+ + AKE+QE +AL + Q+ + + + E +EL + ++M + Sbjct: 379 KRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLASEMAELTARISQLEMARKKKE 438 Query: 383 KACLSDTDLIPVAENIVELDDEGVDIRTIGDTEW-----ENPHSSEVSDVREVSTEAEEN 219 + + + +L+ +++T T EN H + + E S E + Sbjct: 439 SEAVEWQQKAQMVQE--DLEKTRAELKTAMSTPHVAEPAENEHDEQDENGAEASAELRAD 496 Query: 218 SL 213 ++ Sbjct: 497 AM 498
>YNG2_DEBHA (Q6BNL6) Chromatin modification-related protein YNG2 (ING1 homolog| 2) Length = 285 Score = 29.6 bits (65), Expect = 9.8 Identities = 18/68 (26%), Positives = 32/68 (47%) Frame = -3 Query: 419 SKHMDMDNDNVDKACLSDTDLIPVAENIVELDDEGVDIRTIGDTEWENPHSSEVSDVREV 240 SKH+ N D A L +L+P +N++ELD D+ ++ + +N + Sbjct: 98 SKHLS--NFETDIAKLEKDELLPPVDNVMELDTPSSDMNSVINGLSDNLSGTTTPRGHSA 155 Query: 239 STEAEENS 216 ST +N+ Sbjct: 156 STPVADNA 163
>VIM4_XENLA (P24790) Vimentin 4| Length = 463 Score = 29.6 bits (65), Expect = 9.8 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 2/125 (1%) Frame = -3 Query: 566 IKEAVSKLDSAAKEKQELLALVDALQSQIQ--RQEASTKLICEERSELCSSSKHMDMDND 393 ++E +LD A EK + D L +Q R++ ++I E +E S D+DN Sbjct: 148 MREIRRQLDQAINEKARVEVDRDNLGDDLQRLREKLQDEMIQREEAEGNLQSFRQDVDNA 207 Query: 392 NVDKACLSDTDLIPVAENIVELDDEGVDIRTIGDTEWENPHSSEVSDVREVSTEAEENSL 213 ++ + I + + L +E V ++ + D E +RE+ + +E+ + Sbjct: 208 SLAR--------IDLERKVESLQEEIVFLKKLHDEE-----------IRELQLQIQESHI 248 Query: 212 DIPVD 198 + +D Sbjct: 249 QVDMD 253
>DPOD3_SCHPO (P30261) DNA polymerase delta subunit 3 (Cell division control| protein 27) Length = 372 Score = 29.6 bits (65), Expect = 9.8 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -3 Query: 344 ENIVELDDEGVDIRTIGDTEWENPHSSEVSDVREVSTEAEENSLDIP 204 +NI++L+DE V ++ D+E +N S+ E+ TEA+ + D P Sbjct: 239 KNIMQLEDESVSTTSVHDSEDDNLDSNNFQ--LEIGTEAKSAAPDEP 283 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,345,703 Number of Sequences: 219361 Number of extensions: 1599560 Number of successful extensions: 5956 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 5659 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5942 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7422931207 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
