Clone Name	rbaal2p06
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_476582.1| Oryza sativa (japonica cultivar-group), mRNA	418	e-113
2	ref|XM_476583.1| Oryza sativa (japonica cultivar-group), mRNA	418	e-113
3	dbj|AK059496.1| Oryza sativa (japonica cultivar-group) cDNA clon...	418	e-113
4	dbj|AK067870.1| Oryza sativa (japonica cultivar-group) cDNA clon...	410	e-111
5	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	256	9e-65
6	dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic D...	256	9e-65
7	dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic D...	256	9e-65
8	gb|AY109634.1| Zea mays CL27068_1 mRNA sequence	192	1e-45
9	gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retro...	64	7e-07
10	ref|XM_469179.1| Oryza sativa (japonica cultivar-group), mRNA	48	0.041
11	gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome...	48	0.041
12	gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome...	48	0.041
13	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	48	0.041
14	gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genom...	48	0.041
15	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	48	0.041
16	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	48	0.041
17	dbj|AK102364.1| Oryza sativa (japonica cultivar-group) cDNA clon...	48	0.041
18	gb|AY104210.1| Zea mays PCO085619 mRNA sequence	46	0.16
19	ref|XM_720292.1| Plasmodium yoelii yoelii str. 17XNL hypothetica...	44	0.64
20	gb|AC008039.1|AC008039 Homo sapiens clone SCb-391H5 from 7q31, c...	44	0.64
21	gb|AC107738.16| Mus musculus chromosome 1, clone RP23-348C6, com...	42	2.5
22	gb|AC130546.4| Mus musculus BAC clone RP24-303D11 from chromosom...	42	2.5
23	emb|AL356005.9| Human DNA sequence from clone RP11-54B9 on chrom...	42	2.5
24	emb|AL035443.4|HS137H15 Human DNA sequence from clone RP1-137H15...	42	2.5
25	emb|AL663087.14| Mouse DNA sequence from clone RP23-431M5 on chr...	42	2.5
26	emb|BX511144.13| Zebrafish DNA sequence from clone CH211-39L20 i...	42	2.5
27	gb|AC147282.3| Pan troglodytes BAC clone RP43-86L11 from chromos...	42	2.5
28	gb|AC145873.3| Pan troglodytes BAC clone RP43-20K16 from chromos...	42	2.5
29	gb|AC008506.7|AC008506 Homo sapiens chromosome 5 clone CTC-447O6...	42	2.5
30	emb|BX005400.8| Zebrafish DNA sequence from clone CH211-203C7, c...	42	2.5
31	dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	42	2.5
32	gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, co...	40	9.9
33	ref|NM_201840.1| Arabidopsis thaliana unknown protein AT2G30880 ...	40	9.9
34	ref|NM_179824.2| Arabidopsis thaliana unknown protein AT2G30880 ...	40	9.9
35	gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, com...	40	9.9
36	gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl...	40	9.9
37	gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, co...	40	9.9
38	emb|CR854911.13| Zebrafish DNA sequence from clone DKEY-46O18 in...	40	9.9
39	gb|AC129304.6| Mus musculus BAC clone RP24-462H23 from chromosom...	40	9.9
40	gb|AY454302.1| Fundulus heteroclitus aryl hydrocarbon receptor 1...	40	9.9
41	gb|AY454301.1| Fundulus heteroclitus aryl hydrocarbon receptor 1...	40	9.9
42	gb|AY454300.1| Fundulus heteroclitus aryl hydrocarbon receptor 1...	40	9.9
43	gb|AY454299.1| Fundulus heteroclitus aryl hydrocarbon receptor 1...	40	9.9
44	gb|AY454298.1| Fundulus heteroclitus aryl hydrocarbon receptor 1...	40	9.9
45	gb|AY454297.1| Fundulus heteroclitus aryl hydrocarbon receptor 1...	40	9.9
46	gb|AC122018.4| Mus musculus BAC clone RP24-361O20 from chromosom...	40	9.9
47	gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, com...	40	9.9
48	emb|AL513492.10| Human DNA sequence from clone RP11-365P20 on ch...	40	9.9
49	gb|AY143965.1| Arabidopsis thaliana At2g30880/F7F1.9 mRNA, compl...	40	9.9
50	emb|AL353744.18| Human DNA sequence from clone RP13-100A9 on chr...	40	9.9
51	emb|AL136981.22| Human DNA sequence from clone RP11-526D8 on chr...	40	9.9
52	emb|BX548053.7| Zebrafish DNA sequence from clone DKEY-189G17 in...	40	9.9
53	gb|DQ088137.1| Takifugu rubripes aryl hydrocarbon receptor 1A mR...	40	9.9
54	ref|NM_174155.2| Bos taurus prolactin receptor (PRLR), transcrip...	40	9.9
55	ref|NM_001039726.1| Bos taurus prolactin receptor (PRLR), transc...	40	9.9
56	gb|AC018522.7| Homo sapiens chromosome 18, clone RP11-7N19, comp...	40	9.9
57	gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map ...	40	9.9
58	gb|AC109315.3| Homo sapiens chromosome 18, clone RP11-267C16, co...	40	9.9
59	gb|AC008829.7| Homo sapiens chromosome 5 clone CTD-2140K22, comp...	40	9.9
60	gb|AC096766.3| Homo sapiens BAC clone RP11-678H22 from 4, comple...	40	9.9
61	gb|AF024591.3| Fundulus heteroclitus aryl hydrocarbon receptor 1...	40	9.9
62	gb|AY070724.1| Arabidopsis thaliana At2g30880/F7F1.9 mRNA, compl...	40	9.9
63	gb|AY952697.1| Colinus virginianus cytochrome b gene, complete c...	40	9.9
64	gb|AC104131.4| Homo sapiens BAC clone RP11-324H23 from 2, comple...	40	9.9
65	gb|AC008062.3| Homo sapiens BAC clone RP11-68L6 from 2, complete...	40	9.9
66	gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, comp...	40	9.9
67	gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, com...	40	9.9
68	emb|BX571798.5| Zebrafish DNA sequence from clone DKEY-199I24 in...	40	9.9
69	emb|AL359398.2|CNS05TE1 Human chromosome 14 DNA sequence BAC R-3...	40	9.9
70	emb|AL139354.6|CNS01DXK Human chromosome 14 DNA sequence BAC R-9...	40	9.9
71	ref|NM_001037962.1| Takifugu rubripes aryl hydrocarbon receptor ...	40	9.9
72	emb|CT010450.15| Mouse DNA sequence from clone RP23-443B9 on chr...	40	9.9
73	emb|AJ966356.4| Bos taurus partial prlr gene for prolactin recep...	40	9.9
74	gb|AF027403.1|AF027403 Bos taurus prolactin receptor short form ...	40	9.9
75	emb|AL772168.5| Mouse DNA sequence from clone RP23-419B9 on chro...	40	9.9
76	emb|AL591404.4| Mouse DNA sequence from clone RP23-394O9 on chro...	40	9.9
77	gb|L02549.1|BOVPRLR Bos taurus (clone bPRLR 107 and 203) prolact...	40	9.9

---

>ref|XM_476582.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1677

 Score =  418 bits (211), Expect = e-113
 Identities = 471/557 (84%), Gaps = 3/557 (0%)
 Strand = Plus / Minus

                                                                        
Query: 169  tggaaagtatcctcagcaactggctggctatcaacaggaatatccaaactgttttcttca 228
            ||||||| || |||||  ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 1499 tggaaagcattctcagatactggttggctatcaacaggaatatccaagctgttatcttca 1440

                                                                        
Query: 229  gcttctgtgctcacctcccttacatcagatacttcagaggaatgaggattttcccactcc 288
            | ||| ||| | || || |||||||||||||||||||| ||||||||||| | |||||||
Sbjct: 1439 ggttcagtggttacttctcttacatcagatacttcagaagaatgaggattattccactcc 1380

                                                                        
Query: 289  gtgtccccgatcgtacgaatatccactccctcgtcatccaactcaactatgttctccgca 348
            ||| |||| || ||| | ||||| ||||| || |||||||| |||||||||||||| | |
Sbjct: 1379 gtgaccccaattgtagggatatcgactccatcatcatccaaatcaactatgttctcagta 1320

                                                                        
Query: 349  acgggtatcaggtctgtatcgcttaaacaagccttatccacgttatcgttgtccatgtcc 408
            | ||||||  | |||||||| ||||| ||||| |||||||| ||||| |  |||||||| 
Sbjct: 1319 atgggtattggatctgtatcacttaagcaagctttatccacattatcatcttccatgtct 1260

                                                                        
Query: 409  atgtgctttgaac---tagagcatagctctgacctttcttcacagattagttttgtgcta 465
            |  |||||||||    | ||||| ||||| ||||| || || |||| | |||||||||||
Sbjct: 1259 acatgctttgaagacgtggagcacagctccgacctctcctcgcagacttgttttgtgcta 1200

                                                                        
Query: 466  gcctcttgcctttgtatttgcgattgtagagcatccaccagagctaagagttcttgcttt 525
            |  ||||| ||| |||||||| | ||||| || ||||| ||||||| |||||||| ||||
Sbjct: 1199 gtgtcttggcttcgtatttgcaactgtagcgcgtccacaagagctacgagttcttccttt 1140

                                                                        
Query: 526  tctttcgcagcagagtcgagcttactcacagcttcctttattcgcatgtcagcatcggct 585
            ||||| |  ||||| |||||  ||||| |||| || ||||||||||| |||||||| |||
Sbjct: 1139 tcttttgtcgcagaatcgagtctactcgcagcatcatttattcgcatatcagcatctgct 1080

                                                                        
Query: 586  gctgaaaccctagctttctcttcagctctcacgacagctgcttctaaaatgacagcattt 645
            |||||||| || ||||||||||| || ||||| || |||||||||||||| |||||||||
Sbjct: 1079 gctgaaactcttgctttctcttccgccctcacaacggctgcttctaaaattacagcattt 1020

                                                                        
Query: 646  cctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctctt 705
            |||||||||||||| |||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 1019 cctctagcttttcctagttcagaacgccacatttgagcttcttgaagagcagaatctctt 960

                             
Query: 706  tccttgagtaaatgctc 722
            |||||||||||||||||
Sbjct: 959  tccttgagtaaatgctc 943

---

>ref|XM_476583.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1781

 Score =  418 bits (211), Expect = e-113
 Identities = 471/557 (84%), Gaps = 3/557 (0%)
 Strand = Plus / Minus

                                                                        
Query: 169  tggaaagtatcctcagcaactggctggctatcaacaggaatatccaaactgttttcttca 228
            ||||||| || |||||  ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 1603 tggaaagcattctcagatactggttggctatcaacaggaatatccaagctgttatcttca 1544

                                                                        
Query: 229  gcttctgtgctcacctcccttacatcagatacttcagaggaatgaggattttcccactcc 288
            | ||| ||| | || || |||||||||||||||||||| ||||||||||| | |||||||
Sbjct: 1543 ggttcagtggttacttctcttacatcagatacttcagaagaatgaggattattccactcc 1484

                                                                        
Query: 289  gtgtccccgatcgtacgaatatccactccctcgtcatccaactcaactatgttctccgca 348
            ||| |||| || ||| | ||||| ||||| || |||||||| |||||||||||||| | |
Sbjct: 1483 gtgaccccaattgtagggatatcgactccatcatcatccaaatcaactatgttctcagta 1424

                                                                        
Query: 349  acgggtatcaggtctgtatcgcttaaacaagccttatccacgttatcgttgtccatgtcc 408
            | ||||||  | |||||||| ||||| ||||| |||||||| ||||| |  |||||||| 
Sbjct: 1423 atgggtattggatctgtatcacttaagcaagctttatccacattatcatcttccatgtct 1364

                                                                        
Query: 409  atgtgctttgaac---tagagcatagctctgacctttcttcacagattagttttgtgcta 465
            |  |||||||||    | ||||| ||||| ||||| || || |||| | |||||||||||
Sbjct: 1363 acatgctttgaagacgtggagcacagctccgacctctcctcgcagacttgttttgtgcta 1304

                                                                        
Query: 466  gcctcttgcctttgtatttgcgattgtagagcatccaccagagctaagagttcttgcttt 525
            |  ||||| ||| |||||||| | ||||| || ||||| ||||||| |||||||| ||||
Sbjct: 1303 gtgtcttggcttcgtatttgcaactgtagcgcgtccacaagagctacgagttcttccttt 1244

                                                                        
Query: 526  tctttcgcagcagagtcgagcttactcacagcttcctttattcgcatgtcagcatcggct 585
            ||||| |  ||||| |||||  ||||| |||| || ||||||||||| |||||||| |||
Sbjct: 1243 tcttttgtcgcagaatcgagtctactcgcagcatcatttattcgcatatcagcatctgct 1184

                                                                        
Query: 586  gctgaaaccctagctttctcttcagctctcacgacagctgcttctaaaatgacagcattt 645
            |||||||| || ||||||||||| || ||||| || |||||||||||||| |||||||||
Sbjct: 1183 gctgaaactcttgctttctcttccgccctcacaacggctgcttctaaaattacagcattt 1124

                                                                        
Query: 646  cctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctctt 705
            |||||||||||||| |||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 1123 cctctagcttttcctagttcagaacgccacatttgagcttcttgaagagcagaatctctt 1064

                             
Query: 706  tccttgagtaaatgctc 722
            |||||||||||||||||
Sbjct: 1063 tccttgagtaaatgctc 1047

---

>dbj|AK059496.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H09, full
            insert sequence
          Length = 1677

 Score =  418 bits (211), Expect = e-113
 Identities = 471/557 (84%), Gaps = 3/557 (0%)
 Strand = Plus / Minus

                                                                        
Query: 169  tggaaagtatcctcagcaactggctggctatcaacaggaatatccaaactgttttcttca 228
            ||||||| || |||||  ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 1499 tggaaagcattctcagatactggttggctatcaacaggaatatccaagctgttatcttca 1440

                                                                        
Query: 229  gcttctgtgctcacctcccttacatcagatacttcagaggaatgaggattttcccactcc 288
            | ||| ||| | || || |||||||||||||||||||| ||||||||||| | |||||||
Sbjct: 1439 ggttcagtggttacttctcttacatcagatacttcagaagaatgaggattattccactcc 1380

                                                                        
Query: 289  gtgtccccgatcgtacgaatatccactccctcgtcatccaactcaactatgttctccgca 348
            ||| |||| || ||| | ||||| ||||| || |||||||| |||||||||||||| | |
Sbjct: 1379 gtgaccccaattgtagggatatcgactccatcatcatccaaatcaactatgttctcagta 1320

                                                                        
Query: 349  acgggtatcaggtctgtatcgcttaaacaagccttatccacgttatcgttgtccatgtcc 408
            | ||||||  | |||||||| ||||| ||||| |||||||| ||||| |  |||||||| 
Sbjct: 1319 atgggtattggatctgtatcacttaagcaagctttatccacattatcatcttccatgtct 1260

                                                                        
Query: 409  atgtgctttgaac---tagagcatagctctgacctttcttcacagattagttttgtgcta 465
            |  |||||||||    | ||||| ||||| ||||| || || |||| | |||||||||||
Sbjct: 1259 acatgctttgaagacgtggagcacagctccgacctctcctcgcagacttgttttgtgcta 1200

                                                                        
Query: 466  gcctcttgcctttgtatttgcgattgtagagcatccaccagagctaagagttcttgcttt 525
            |  ||||| ||| |||||||| | ||||| || ||||| ||||||| |||||||| ||||
Sbjct: 1199 gtgtcttggcttcgtatttgcaactgtagcgcgtccacaagagctacgagttcttccttt 1140

                                                                        
Query: 526  tctttcgcagcagagtcgagcttactcacagcttcctttattcgcatgtcagcatcggct 585
            ||||| |  ||||| |||||  ||||| |||| || ||||||||||| |||||||| |||
Sbjct: 1139 tcttttgtcgcagaatcgagtctactcgcagcatcatttattcgcatatcagcatctgct 1080

                                                                        
Query: 586  gctgaaaccctagctttctcttcagctctcacgacagctgcttctaaaatgacagcattt 645
            |||||||| || ||||||||||| || ||||| || |||||||||||||| |||||||||
Sbjct: 1079 gctgaaactcttgctttctcttccgccctcacaacggctgcttctaaaattacagcattt 1020

                                                                        
Query: 646  cctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctctt 705
            |||||||||||||| |||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 1019 cctctagcttttcctagttcagaacgccacatttgagcttcttgaagagcagaatctctt 960

                             
Query: 706  tccttgagtaaatgctc 722
            |||||||||||||||||
Sbjct: 959  tccttgagtaaatgctc 943

---

>dbj|AK067870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126D19, full
            insert sequence
          Length = 1780

 Score =  410 bits (207), Expect = e-111
 Identities = 470/557 (84%), Gaps = 3/557 (0%)
 Strand = Plus / Minus

                                                                        
Query: 169  tggaaagtatcctcagcaactggctggctatcaacaggaatatccaaactgttttcttca 228
            ||||||| || |||||  ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 1602 tggaaagcattctcagatactggttggctatcaacaggaatatccaagctgttatcttca 1543

                                                                        
Query: 229  gcttctgtgctcacctcccttacatcagatacttcagaggaatgaggattttcccactcc 288
            | ||| ||| | || || |||||||||||||||||||| ||||||||||| | |||||||
Sbjct: 1542 ggttcagtggttacttctcttacatcagatacttcagaagaatgaggattattccactcc 1483

                                                                        
Query: 289  gtgtccccgatcgtacgaatatccactccctcgtcatccaactcaactatgttctccgca 348
            ||| |||| || ||| | ||||| ||||| || |||||||| |||||||||||||| | |
Sbjct: 1482 gtgaccccaattgtagggatatcgactccatcatcatccaaatcaactatgttctcagta 1423

                                                                        
Query: 349  acgggtatcaggtctgtatcgcttaaacaagccttatccacgttatcgttgtccatgtcc 408
            | ||||||  | |||||||| ||||| ||||| |||||||| ||||| |  |||||||| 
Sbjct: 1422 atgggtattggatctgtatcacttaagcaagctttatccacattatcatcttccatgtct 1363

                                                                        
Query: 409  atgtgctttgaac---tagagcatagctctgacctttcttcacagattagttttgtgcta 465
            |  |||||||||    | ||||| ||||| ||||| || || |||| | |||||||||||
Sbjct: 1362 acatgctttgaagacgtggagcacagctccgacctctcctcgcagacttgttttgtgcta 1303

                                                                        
Query: 466  gcctcttgcctttgtatttgcgattgtagagcatccaccagagctaagagttcttgcttt 525
            |  ||||| ||| |||||||| | ||||| || ||||| ||||||| |||||||| ||||
Sbjct: 1302 gtgtcttggcttcgtatttgcaactgtagcgcgtccacaagagctacgagttcttccttt 1243

                                                                        
Query: 526  tctttcgcagcagagtcgagcttactcacagcttcctttattcgcatgtcagcatcggct 585
            ||||| |  ||||| |||||  ||||| |||| || ||||||||||| |||||||| |||
Sbjct: 1242 tcttttgtcgcagaatcgagtctactcgcagcatcatttattcgcatatcagcatctgct 1183

                                                                        
Query: 586  gctgaaaccctagctttctcttcagctctcacgacagctgcttctaaaatgacagcattt 645
            |||||||| || ||||||||||| || ||||| ||  ||||||||||||| |||||||||
Sbjct: 1182 gctgaaactcttgctttctcttccgccctcacaacgactgcttctaaaattacagcattt 1123

                                                                        
Query: 646  cctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctctt 705
            |||||||||||||| |||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 1122 cctctagcttttcctagttcagaacgccacatttgagcttcttgaagagcagaatctctt 1063

                             
Query: 706  tccttgagtaaatgctc 722
            |||||||||||||||||
Sbjct: 1062 tccttgagtaaatgctc 1046

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  256 bits (129), Expect = 9e-65
 Identities = 219/249 (87%)
 Strand = Plus / Minus

                                                                           
Query: 474     cctttgtatttgcgattgtagagcatccaccagagctaagagttcttgcttttctttcgc 533
               |||| |||||||| | ||||| || ||||| ||||||| |||||||| ||||||||| | 
Sbjct: 2044470 ccttcgtatttgcaactgtagcgcgtccacaagagctacgagttcttccttttcttttgt 2044411

                                                                           
Query: 534     agcagagtcgagcttactcacagcttcctttattcgcatgtcagcatcggctgctgaaac 593
                ||||| |||||  ||||| |||| || ||||||||||| |||||||| |||||||||||
Sbjct: 2044410 cgcagaatcgagtctactcgcagcatcatttattcgcatatcagcatctgctgctgaaac 2044351

                                                                           
Query: 594     cctagctttctcttcagctctcacgacagctgcttctaaaatgacagcatttcctctagc 653
                || ||||||||||| || ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 2044350 tcttgctttctcttccgccctcacaacggctgcttctaaaattacagcatttcctctagc 2044291

                                                                           
Query: 654     ttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctctttccttgag 713
               |||||| |||||| | |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2044290 ttttcctagttcagaacgccacatttgagcttcttgaagagcagaatctctttccttgag 2044231

                        
Query: 714     taaatgctc 722
               |||||||||
Sbjct: 2044230 taaatgctc 2044222



 Score =  174 bits (88), Expect = 3e-40
 Identities = 211/252 (83%)
 Strand = Plus / Minus

                                                                           
Query: 169     tggaaagtatcctcagcaactggctggctatcaacaggaatatccaaactgttttcttca 228
               ||||||| || |||||  ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 2044902 tggaaagcattctcagatactggttggctatcaacaggaatatccaagctgttatcttca 2044843

                                                                           
Query: 229     gcttctgtgctcacctcccttacatcagatacttcagaggaatgaggattttcccactcc 288
               | ||| ||| | || || |||||||||||||||||||| ||||||||||| | |||||||
Sbjct: 2044842 ggttcagtggttacttctcttacatcagatacttcagaagaatgaggattattccactcc 2044783

                                                                           
Query: 289     gtgtccccgatcgtacgaatatccactccctcgtcatccaactcaactatgttctccgca 348
               ||| |||| || ||| | ||||| ||||| || |||||||| |||||||||||||| | |
Sbjct: 2044782 gtgaccccaattgtagggatatcgactccatcatcatccaaatcaactatgttctcagta 2044723

                                                                           
Query: 349     acgggtatcaggtctgtatcgcttaaacaagccttatccacgttatcgttgtccatgtcc 408
               | ||||||  | |||||||| ||||| ||||| |||||||| ||||| |  |||||||| 
Sbjct: 2044722 atgggtattggatctgtatcacttaagcaagctttatccacattatcatcttccatgtct 2044663

                           
Query: 409     atgtgctttgaa 420
               |  |||||||||
Sbjct: 2044662 acatgctttgaa 2044651

---

>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0495H05
          Length = 205595

 Score =  256 bits (129), Expect = 9e-65
 Identities = 219/249 (87%)
 Strand = Plus / Minus

                                                                          
Query: 474    cctttgtatttgcgattgtagagcatccaccagagctaagagttcttgcttttctttcgc 533
              |||| |||||||| | ||||| || ||||| ||||||| |||||||| ||||||||| | 
Sbjct: 128767 ccttcgtatttgcaactgtagcgcgtccacaagagctacgagttcttccttttcttttgt 128708

                                                                          
Query: 534    agcagagtcgagcttactcacagcttcctttattcgcatgtcagcatcggctgctgaaac 593
               ||||| |||||  ||||| |||| || ||||||||||| |||||||| |||||||||||
Sbjct: 128707 cgcagaatcgagtctactcgcagcatcatttattcgcatatcagcatctgctgctgaaac 128648

                                                                          
Query: 594    cctagctttctcttcagctctcacgacagctgcttctaaaatgacagcatttcctctagc 653
               || ||||||||||| || ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 128647 tcttgctttctcttccgccctcacaacggctgcttctaaaattacagcatttcctctagc 128588

                                                                          
Query: 654    ttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctctttccttgag 713
              |||||| |||||| | |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 128587 ttttcctagttcagaacgccacatttgagcttcttgaagagcagaatctctttccttgag 128528

                       
Query: 714    taaatgctc 722
              |||||||||
Sbjct: 128527 taaatgctc 128519



 Score =  174 bits (88), Expect = 3e-40
 Identities = 211/252 (83%)
 Strand = Plus / Minus

                                                                          
Query: 169    tggaaagtatcctcagcaactggctggctatcaacaggaatatccaaactgttttcttca 228
              ||||||| || |||||  ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 129199 tggaaagcattctcagatactggttggctatcaacaggaatatccaagctgttatcttca 129140

                                                                          
Query: 229    gcttctgtgctcacctcccttacatcagatacttcagaggaatgaggattttcccactcc 288
              | ||| ||| | || || |||||||||||||||||||| ||||||||||| | |||||||
Sbjct: 129139 ggttcagtggttacttctcttacatcagatacttcagaagaatgaggattattccactcc 129080

                                                                          
Query: 289    gtgtccccgatcgtacgaatatccactccctcgtcatccaactcaactatgttctccgca 348
              ||| |||| || ||| | ||||| ||||| || |||||||| |||||||||||||| | |
Sbjct: 129079 gtgaccccaattgtagggatatcgactccatcatcatccaaatcaactatgttctcagta 129020

                                                                          
Query: 349    acgggtatcaggtctgtatcgcttaaacaagccttatccacgttatcgttgtccatgtcc 408
              | ||||||  | |||||||| ||||| ||||| |||||||| ||||| |  |||||||| 
Sbjct: 129019 atgggtattggatctgtatcacttaagcaagctttatccacattatcatcttccatgtct 128960

                          
Query: 409    atgtgctttgaa 420
              |  |||||||||
Sbjct: 128959 acatgctttgaa 128948

---

>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           BAC clone:OJ1417_E01
          Length = 118058

 Score =  256 bits (129), Expect = 9e-65
 Identities = 219/249 (87%)
 Strand = Plus / Minus

                                                                       
Query: 474 cctttgtatttgcgattgtagagcatccaccagagctaagagttcttgcttttctttcgc 533
           |||| |||||||| | ||||| || ||||| ||||||| |||||||| ||||||||| | 
Sbjct: 263 ccttcgtatttgcaactgtagcgcgtccacaagagctacgagttcttccttttcttttgt 204

                                                                       
Query: 534 agcagagtcgagcttactcacagcttcctttattcgcatgtcagcatcggctgctgaaac 593
            ||||| |||||  ||||| |||| || ||||||||||| |||||||| |||||||||||
Sbjct: 203 cgcagaatcgagtctactcgcagcatcatttattcgcatatcagcatctgctgctgaaac 144

                                                                       
Query: 594 cctagctttctcttcagctctcacgacagctgcttctaaaatgacagcatttcctctagc 653
            || ||||||||||| || ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 143 tcttgctttctcttccgccctcacaacggctgcttctaaaattacagcatttcctctagc 84

                                                                       
Query: 654 ttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctctttccttgag 713
           |||||| |||||| | |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 83  ttttcctagttcagaacgccacatttgagcttcttgaagagcagaatctctttccttgag 24

                    
Query: 714 taaatgctc 722
           |||||||||
Sbjct: 23  taaatgctc 15



 Score =  174 bits (88), Expect = 3e-40
 Identities = 211/252 (83%)
 Strand = Plus / Minus

                                                                       
Query: 169 tggaaagtatcctcagcaactggctggctatcaacaggaatatccaaactgttttcttca 228
           ||||||| || |||||  ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 695 tggaaagcattctcagatactggttggctatcaacaggaatatccaagctgttatcttca 636

                                                                       
Query: 229 gcttctgtgctcacctcccttacatcagatacttcagaggaatgaggattttcccactcc 288
           | ||| ||| | || || |||||||||||||||||||| ||||||||||| | |||||||
Sbjct: 635 ggttcagtggttacttctcttacatcagatacttcagaagaatgaggattattccactcc 576

                                                                       
Query: 289 gtgtccccgatcgtacgaatatccactccctcgtcatccaactcaactatgttctccgca 348
           ||| |||| || ||| | ||||| ||||| || |||||||| |||||||||||||| | |
Sbjct: 575 gtgaccccaattgtagggatatcgactccatcatcatccaaatcaactatgttctcagta 516

                                                                       
Query: 349 acgggtatcaggtctgtatcgcttaaacaagccttatccacgttatcgttgtccatgtcc 408
           | ||||||  | |||||||| ||||| ||||| |||||||| ||||| |  |||||||| 
Sbjct: 515 atgggtattggatctgtatcacttaagcaagctttatccacattatcatcttccatgtct 456

                       
Query: 409 atgtgctttgaa 420
           |  |||||||||
Sbjct: 455 acatgctttgaa 444

---

>gb|AY109634.1| Zea mays CL27068_1 mRNA sequence
          Length = 1089

 Score =  192 bits (97), Expect = 1e-45
 Identities = 208/245 (84%)
 Strand = Plus / Plus

                                                                       
Query: 460 gtgctagcctcttgcctttgtatttgcgattgtagagcatccaccagagctaagagttct 519
           ||||||| |||||||||||||||||| ||||||||||||||||| || |||| ||| || 
Sbjct: 566 gtgctagtctcttgcctttgtatttgggattgtagagcatccacaagggctaggagatcc 625

                                                                       
Query: 520 tgcttttctttcgcagcagagtcgagcttactcacagcttcctttattcgcatgtcagca 579
           | ||||||||| |  ||||| || ||     |||  ||||| ||||| || |||||||||
Sbjct: 626 tccttttctttggtggcagactcaagtcggttcatggcttcttttatgcggatgtcagca 685

                                                                       
Query: 580 tcggctgctgaaaccctagctttctcttcagctctcacgacagctgcttctaaaatgaca 639
           || |||||||| ||||||||||||||||| ||||| || ||||| ||||||| ||| |||
Sbjct: 686 tctgctgctgagaccctagctttctcttcggctctgacaacagccgcttctagaattaca 745

                                                                       
Query: 640 gcatttcctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaa 699
           || ||||||||||||||||| || ||  |||||||||||||||||||||||||||| |||
Sbjct: 746 gcgtttcctctagcttttcctagctccgagcgccacatctgagcttcttgaagagcggaa 805

                
Query: 700 tctct 704
           |||||
Sbjct: 806 tctct 810



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 131/160 (81%), Gaps = 2/160 (1%)
 Strand = Plus / Plus

                                                                       
Query: 197 tatcaacaggaatatccaaactgttttcttcagcttctgtgctcacctcccttacatcag 256
           |||| |||||||||||||| ||||||||||| | ||||| | | || |||||||||||||
Sbjct: 306 tatcgacaggaatatccaagctgttttcttcgggttctggggttacttcccttacatcag 365

                                                                       
Query: 257 atacttcagaggaatgaggattttcccactccgtgtccccgatcgtacgaatatccact- 315
           | ||||| || ||| | ||||  ||||| || |||||||||| |||| | || || ||| 
Sbjct: 366 acacttcggaagaacggggatcgtcccattcggtgtccccgaccgtagggatgtcgactn 425

                                                   
Query: 316 ccctcgtcatccaactcaactatgttctccgcaacgggta 355
           |||||||| ||||| ||||| | |||||||| ||| ||||
Sbjct: 426 ccctcgtcgtccaa-tcaacaacgttctccgtaaccggta 464

---

>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1,
              xilon1 retrotransposon, helitron B73_14578, gypsy
              retrotransposon huck1 and ruda retrotransposon, complete
              sequence
          Length = 152384

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                          
Query: 244    tcccttacatcagatacttcagaggaatgaggattttcccactccgtgtccccgatcgta 303
              |||||||||||||| |||||||| || || ||||| ||||||||  ||||||||| | ||
Sbjct: 138756 tcccttacatcagacacttcagaagagtggggattatcccactcaatgtccccgaccata 138697

                                          
Query: 304    cgaatatccactccctcgtcatccaact 331
                 ||||  |||||||||||||||||||
Sbjct: 138696 gagatatggactccctcgtcatccaact 138669

---

>ref|XM_469179.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1904

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 647  ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
            |||||||||| || || |||  ||||||||| ||||| || ||||| |||| ||||||||
Sbjct: 1084 ctctagctttccctagctcagtgcgccacatatgagcctcctgaagtgcagcatctcttt 1025

                
Query: 707  cctt 710
            ||||
Sbjct: 1024 cctt 1021

---

>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0059G01, complete sequence
          Length = 141661

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 647   ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
             |||||||||| || || |||  ||||||||| ||||| || ||||| |||| ||||||||
Sbjct: 23487 ctctagctttccctagctcagtgcgccacatatgagcctcctgaagtgcagcatctcttt 23546

                 
Query: 707   cctt 710
             ||||
Sbjct: 23547 cctt 23550

---

>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16,
              complete sequence
          Length = 159525

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                          
Query: 647    ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
              |||||||||| || || |||  ||||||||| ||||| || ||||| |||| ||||||||
Sbjct: 130259 ctctagctttccctagctcagtgcgccacatatgagcctcctgaagtgcagcatctcttt 130318

                  
Query: 707    cctt 710
              ||||
Sbjct: 130319 cctt 130322

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                            
Query: 647      ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
                |||||||||| || || |||  ||||||||| ||||| || ||||| |||| ||||||||
Sbjct: 25922307 ctctagctttccctagctcagtgcgccacatatgagcctcctgaagtgcagcatctcttt 25922366

                    
Query: 707      cctt 710
                ||||
Sbjct: 25922367 cctt 25922370

---

>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete
             sequence
          Length = 140720

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 647   ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
             |||||||||| || || |||  ||||||||| ||||| || ||||| |||| ||||||||
Sbjct: 85613 ctctagctttccctagctcagtgcgccacatatgagcctcctgaagtgcagcatctcttt 85554

                 
Query: 707   cctt 710
             ||||
Sbjct: 85553 cctt 85550

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                           
Query: 647     ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
               |||||||||| || || |||  ||||||||| ||||| || ||||| |||| ||||||||
Sbjct: 3036243 ctctagctttccctagctcagtgcgccacatatgagcctcctgaagtgcagcatctcttt 3036302

                   
Query: 707     cctt 710
               ||||
Sbjct: 3036303 cctt 3036306

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                            
Query: 647      ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
                |||||||||| || || |||  ||||||||| ||||| || ||||| |||| ||||||||
Sbjct: 26013616 ctctagctttccctagctcagtgcgccacatatgagcctcctgaagtgcagcatctcttt 26013675

                    
Query: 707      cctt 710
                ||||
Sbjct: 26013676 cctt 26013679

---

>dbj|AK102364.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091J20, full
            insert sequence
          Length = 1905

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 647  ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
            |||||||||| || || |||  ||||||||| ||||| || ||||| |||| ||||||||
Sbjct: 1085 ctctagctttccctagctcagtgcgccacatatgagcctcctgaagtgcagcatctcttt 1026

                
Query: 707  cctt 710
            ||||
Sbjct: 1025 cctt 1022

---

>gb|AY104210.1| Zea mays PCO085619 mRNA sequence
          Length = 1982

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 652  gcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctctttcctt 710
            |||||| | ||||||| ||||||||| ||||| || ||||  |||| ||||||||||||
Sbjct: 1136 gcttttactagttcaatgcgccacatatgagcctcctgaaatgcagcatctctttcctt 1078

---

>ref|XM_720292.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein
          (PY04993) partial mRNA
          Length = 1137

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 66 caaaaacagaataagattataa 87
          ||||||||||||||||||||||
Sbjct: 61 caaaaacagaataagattataa 82

---

>gb|AC008039.1|AC008039 Homo sapiens clone SCb-391H5 from 7q31, complete sequence
          Length = 197346

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 646   cctctagcttttccaagttcaa 667
             ||||||||||||||||||||||
Sbjct: 47648 cctctagcttttccaagttcaa 47669

---

>gb|AC107738.16| Mus musculus chromosome 1, clone RP23-348C6, complete sequence
          Length = 228427

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   tacttcagaggaatgaggatt 278
             |||||||||||||||||||||
Sbjct: 92273 tacttcagaggaatgaggatt 92253

---

>gb|AC130546.4| Mus musculus BAC clone RP24-303D11 from chromosome 3, complete sequence
          Length = 171125

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 67    aaaaacagaataagattataagaatgttc 95
             ||||| |||||||||||||| ||||||||
Sbjct: 54215 aaaaaaagaataagattatacgaatgttc 54243

---

>emb|AL356005.9| Human DNA sequence from clone RP11-54B9 on chromosome 1 Contains a
              pseudogene similar to flavin-containing monooxygenase
              proteins, a ribosomal protein L4 (RPL4) pseudogene and the
              5' end of a pseudogene similar to flavin-containing
              monooxygenase proteins, complete sequence
          Length = 118425

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 641    catttcctctagcttttccaa 661
              |||||||||||||||||||||
Sbjct: 102098 catttcctctagcttttccaa 102078

---

>emb|AL035443.4|HS137H15 Human DNA sequence from clone RP1-137H15 on chromosome Xq26.2-27.2
              Contains a novel gene, the ZIC3 gene for Zic family member
              3 heterotaxy (odd-paired homolog, Drosophila) and four CpG
              islands, complete sequence
          Length = 109339

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 641    catttcctctagcttttccaa 661
              |||||||||||||||||||||
Sbjct: 106273 catttcctctagcttttccaa 106253

---

>emb|AL663087.14| Mouse DNA sequence from clone RP23-431M5 on chromosome 11 Contains the 5'
              end of the Grb10 gene for growth factor receptor bound
              protein 10, a nucleosome assembly protein 1-like 1 (Nap1l1)
              pseudogene and three CpG islands, complete sequence
          Length = 174389

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 695    cagaatctctttccttgagta 715
              |||||||||||||||||||||
Sbjct: 127870 cagaatctctttccttgagta 127890

---

>emb|BX511144.13| Zebrafish DNA sequence from clone CH211-39L20 in linkage group 12,
              complete sequence
          Length = 185993

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 204    aggaatatccaaactgttttcttca 228
              |||||||||||||| ||||||||||
Sbjct: 169784 aggaatatccaaacagttttcttca 169808

---

>gb|AC147282.3| Pan troglodytes BAC clone RP43-86L11 from chromosome 7, complete
             sequence
          Length = 223086

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 204   aggaatatccaaactgttttc 224
             |||||||||||||||||||||
Sbjct: 98641 aggaatatccaaactgttttc 98621

---

>gb|AC145873.3| Pan troglodytes BAC clone RP43-20K16 from chromosome 7, complete sequence
          Length = 149916

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 204    aggaatatccaaactgttttc 224
              |||||||||||||||||||||
Sbjct: 137310 aggaatatccaaactgttttc 137330

---

>gb|AC008506.7|AC008506 Homo sapiens chromosome 5 clone CTC-447O6, complete sequence
          Length = 191557

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 204    aggaatatccaaactgttttc 224
              |||||||||||||||||||||
Sbjct: 147400 aggaatatccaaactgttttc 147380

---

>emb|BX005400.8| Zebrafish DNA sequence from clone CH211-203C7, complete sequence
          Length = 152580

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 204    aggaatatccaaactgttttcttca 228
              |||||||||||||| ||||||||||
Sbjct: 120985 aggaatatccaaacagttttcttca 121009

---

>dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6N7
          Length = 74282

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 217   ctgttttcttcagcttctgtg 237
             |||||||||||||||||||||
Sbjct: 36144 ctgttttcttcagcttctgtg 36124

---

>gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, complete sequence
          Length = 221632

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 594   cctagctttctcttcagctc 613
             ||||||||||||||||||||
Sbjct: 31391 cctagctttctcttcagctc 31372

---

>ref|NM_201840.1| Arabidopsis thaliana unknown protein AT2G30880 transcript variant
            AT2G30880.2 mRNA, complete cds
          Length = 2710

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 647  ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
            |||| ||||| ||||| ||| | |||||||| || || ||||| |||||||  |||||||
Sbjct: 1096 ctctggctttcccaagctcagaccgccacatatgtgcctcttggagagcagcgtctcttt 1037

                
Query: 707  cctt 710
            ||||
Sbjct: 1036 cctt 1033

---

>ref|NM_179824.2| Arabidopsis thaliana unknown protein AT2G30880 transcript variant
            AT2G30880.1 mRNA, complete cds
          Length = 2694

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 647  ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
            |||| ||||| ||||| ||| | |||||||| || || ||||| |||||||  |||||||
Sbjct: 1160 ctctggctttcccaagctcagaccgccacatatgtgcctcttggagagcagcgtctcttt 1101

                
Query: 707  cctt 710
            ||||
Sbjct: 1100 cctt 1097

---

>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence
          Length = 205646

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 634   atgacagcatttcctctagc 653
             ||||||||||||||||||||
Sbjct: 30763 atgacagcatttcctctagc 30744

---

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 183     agcaactggctggctatcaacagg 206
               |||||||||||||| |||||||||
Sbjct: 4765635 agcaactggctggccatcaacagg 4765612

---

>gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, complete sequence
          Length = 198984

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 594   cctagctttctcttcagctc 613
             ||||||||||||||||||||
Sbjct: 18384 cctagctttctcttcagctc 18403

---

>emb|CR854911.13| Zebrafish DNA sequence from clone DKEY-46O18 in linkage group 9,
            complete sequence
          Length = 233574

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  aaaaacttttacaagtagtc 131
            ||||||||||||||||||||
Sbjct: 4425 aaaaacttttacaagtagtc 4406

---

>gb|AC129304.6| Mus musculus BAC clone RP24-462H23 from chromosome 10, complete
             sequence
          Length = 153772

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   ttgtagagcatccaccagag 508
             ||||||||||||||||||||
Sbjct: 93606 ttgtagagcatccaccagag 93587

---

>gb|AY454302.1| Fundulus heteroclitus aryl hydrocarbon receptor 1 (AHR1) mRNA,
            AHR1*3C allele, complete cds
          Length = 2947

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tggtgtacaagaacggcaaa 152
            ||||||||||||||||||||
Sbjct: 1091 tggtgtacaagaacggcaaa 1110

---

>gb|AY454301.1| Fundulus heteroclitus aryl hydrocarbon receptor 1 (AHR1) mRNA,
            AHR1*3B allele, complete cds
          Length = 2947

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tggtgtacaagaacggcaaa 152
            ||||||||||||||||||||
Sbjct: 1091 tggtgtacaagaacggcaaa 1110

---

>gb|AY454300.1| Fundulus heteroclitus aryl hydrocarbon receptor 1 (AHR1) mRNA,
            AHR1*3A allele, complete cds
          Length = 2947

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tggtgtacaagaacggcaaa 152
            ||||||||||||||||||||
Sbjct: 1091 tggtgtacaagaacggcaaa 1110

---

>gb|AY454299.1| Fundulus heteroclitus aryl hydrocarbon receptor 1 (AHR1) mRNA, AHR1*2
            allele, complete cds
          Length = 2947

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tggtgtacaagaacggcaaa 152
            ||||||||||||||||||||
Sbjct: 1091 tggtgtacaagaacggcaaa 1110

---

>gb|AY454298.1| Fundulus heteroclitus aryl hydrocarbon receptor 1 (AHR1) mRNA,
            AHR1*1C allele, complete cds
          Length = 2947

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tggtgtacaagaacggcaaa 152
            ||||||||||||||||||||
Sbjct: 1091 tggtgtacaagaacggcaaa 1110

---

>gb|AY454297.1| Fundulus heteroclitus aryl hydrocarbon receptor 1 (AHR1) mRNA,
            AHR1*1B allele, complete cds
          Length = 2947

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tggtgtacaagaacggcaaa 152
            ||||||||||||||||||||
Sbjct: 1091 tggtgtacaagaacggcaaa 1110

---

>gb|AC122018.4| Mus musculus BAC clone RP24-361O20 from chromosome 10, complete
             sequence
          Length = 173543

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   ttgtagagcatccaccagag 508
             ||||||||||||||||||||
Sbjct: 27362 ttgtagagcatccaccagag 27343

---

>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence
          Length = 204292

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 634   atgacagcatttcctctagc 653
             ||||||||||||||||||||
Sbjct: 29528 atgacagcatttcctctagc 29547

---

>emb|AL513492.10| Human DNA sequence from clone RP11-365P20 on chromosome 6, complete
             sequence
          Length = 113677

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 582   ggctgctgaaaccctagctt 601
             ||||||||||||||||||||
Sbjct: 72367 ggctgctgaaaccctagctt 72348

---

>gb|AY143965.1| Arabidopsis thaliana At2g30880/F7F1.9 mRNA, complete cds
          Length = 1515

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 647 ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
           |||| ||||| ||||| ||| | |||||||| || || ||||| |||||||  |||||||
Sbjct: 970 ctctggctttcccaagctcagaccgccacatatgtgcctcttggagagcagcgtctcttt 911

               
Query: 707 cctt 710
           ||||
Sbjct: 910 cctt 907

---

>emb|AL353744.18| Human DNA sequence from clone RP13-100A9 on chromosome Xq11.2-13.1
              Contains a GrpE-like 2 mitochondrial (E. coli) pseudogene
              and a novel pseudogene, complete sequence
          Length = 131070

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 641    catttcctctagcttttcca 660
              ||||||||||||||||||||
Sbjct: 116523 catttcctctagcttttcca 116542

---

>emb|AL136981.22| Human DNA sequence from clone RP11-526D8 on chromosome 9 Contains the
             5' end of the gene for coiled-coil protein (BICD2)
             (KIAA0699), a novel gene, a eukaryotic translation
             elongation factor 1 delta (guanine nucleotide exchange
             protein) (EEF1D) pseudogene, the gene for a novel KRAB
             box-containing C2H2 type zinc finger protein, a novel
             gene, a pseudogene similar to part of sorting nexin
             associated golgi protein 1 (SNAG1), a novel pseudogene, a
             melanoma antigen pseudogene and three CpG islands,
             complete sequence
          Length = 182280

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 655   tttccaagttcaaagcgcca 674
             ||||||||||||||||||||
Sbjct: 37331 tttccaagttcaaagcgcca 37312

---

>emb|BX548053.7| Zebrafish DNA sequence from clone DKEY-189G17 in linkage group 9,
             complete sequence
          Length = 210830

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   aaaaacttttacaagtagtc 131
             ||||||||||||||||||||
Sbjct: 59743 aaaaacttttacaagtagtc 59762

---

>gb|DQ088137.1| Takifugu rubripes aryl hydrocarbon receptor 1A mRNA, complete cds
          Length = 2922

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tggtgtacaagaacggcaaa 152
            ||||||||||||||||||||
Sbjct: 1091 tggtgtacaagaacggcaaa 1110

---

>ref|NM_174155.2| Bos taurus prolactin receptor (PRLR), transcript variant 1, mRNA
          Length = 2428

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 cttggaaagtatcctcagca 186
           ||||||||||||||||||||
Sbjct: 28  cttggaaagtatcctcagca 9

---

>ref|NM_001039726.1| Bos taurus prolactin receptor (PRLR), transcript variant 2, mRNA
          Length = 2389

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 cttggaaagtatcctcagca 186
           ||||||||||||||||||||
Sbjct: 28  cttggaaagtatcctcagca 9

---

>gb|AC018522.7| Homo sapiens chromosome 18, clone RP11-7N19, complete sequence
          Length = 169578

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 641   catttcctctagcttttccaagtt 664
             |||||||||||| |||||||||||
Sbjct: 99196 catttcctctagattttccaagtt 99219

---

>gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map m283, complete
             sequence
          Length = 89779

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 647   ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
             |||| ||||| ||||| ||| | |||||||| || || ||||| |||||||  |||||||
Sbjct: 18009 ctctggctttcccaagctcagaccgccacatatgtgcctcttggagagcagcgtctcttt 18068

                 
Query: 707   cctt 710
             ||||
Sbjct: 18069 cctt 18072

---

>gb|AC109315.3| Homo sapiens chromosome 18, clone RP11-267C16, complete sequence
          Length = 157966

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 641   catttcctctagcttttccaagtt 664
             |||||||||||| |||||||||||
Sbjct: 14722 catttcctctagattttccaagtt 14699

---

>gb|AC008829.7| Homo sapiens chromosome 5 clone CTD-2140K22, complete sequence
          Length = 159145

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 651   agcttttccaagttcaaagc 670
             ||||||||||||||||||||
Sbjct: 61915 agcttttccaagttcaaagc 61896

---

>gb|AC096766.3| Homo sapiens BAC clone RP11-678H22 from 4, complete sequence
          Length = 173836

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     cagaataagattataagaat 91
              ||||||||||||||||||||
Sbjct: 134189 cagaataagattataagaat 134170

---

>gb|AF024591.3| Fundulus heteroclitus aryl hydrocarbon receptor 1 (AHR1) mRNA, AHR1*1
            allele, complete cds
          Length = 3371

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tggtgtacaagaacggcaaa 152
            ||||||||||||||||||||
Sbjct: 1256 tggtgtacaagaacggcaaa 1275

---

>gb|AY070724.1| Arabidopsis thaliana At2g30880/F7F1.9 mRNA, complete cds
          Length = 1968

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 647  ctctagcttttccaagttcaaagcgccacatctgagcttcttgaagagcagaatctcttt 706
            |||| ||||| ||||| ||| | |||||||| || || ||||| |||||||  |||||||
Sbjct: 1161 ctctggctttcccaagctcagaccgccacatatgtgcctcttggagagcagcgtctcttt 1102

                
Query: 707  cctt 710
            ||||
Sbjct: 1101 cctt 1098

---

>gb|AY952697.1| Colinus virginianus cytochrome b gene, complete cds; mitochondrial
          Length = 1143

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 591 aaccctagctttctcttcag 610
           ||||||||||||||||||||
Sbjct: 180 aaccctagctttctcttcag 199

---

>gb|AC104131.4| Homo sapiens BAC clone RP11-324H23 from 2, complete sequence
          Length = 154891

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 641    catttcctctagcttttccaagtt 664
              |||||||||||| |||||||||||
Sbjct: 130972 catttcctctaggttttccaagtt 130949

---

>gb|AC008062.3| Homo sapiens BAC clone RP11-68L6 from 2, complete sequence
          Length = 131250

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 642   atttcctctagcttttccaa 661
             ||||||||||||||||||||
Sbjct: 28493 atttcctctagcttttccaa 28474

---

>gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, complete sequence
          Length = 184585

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 641   catttcctctagcttttccaagtt 664
             |||||||||||| |||||||||||
Sbjct: 45802 catttcctctaggttttccaagtt 45825

---

>gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, complete sequence
          Length = 194165

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 594    cctagctttctcttcagctc 613
              ||||||||||||||||||||
Sbjct: 168148 cctagctttctcttcagctc 168129

---

>emb|BX571798.5| Zebrafish DNA sequence from clone DKEY-199I24 in linkage group 18,
             complete sequence
          Length = 108129

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 446   cacagattagttttgtgcta 465
             ||||||||||||||||||||
Sbjct: 47703 cacagattagttttgtgcta 47722

---

>emb|AL359398.2|CNS05TE1 Human chromosome 14 DNA sequence BAC R-369C8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176399

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 642   atttcctctagcttttccaa 661
             ||||||||||||||||||||
Sbjct: 54039 atttcctctagcttttccaa 54058

---

>emb|AL139354.6|CNS01DXK Human chromosome 14 DNA sequence BAC R-945F5 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 201539

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 642    atttcctctagcttttccaa 661
              ||||||||||||||||||||
Sbjct: 183117 atttcctctagcttttccaa 183136

---

>ref|NM_001037962.1| Takifugu rubripes aryl hydrocarbon receptor 1A (ahr1a), mRNA
          Length = 2922

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tggtgtacaagaacggcaaa 152
            ||||||||||||||||||||
Sbjct: 1091 tggtgtacaagaacggcaaa 1110

---

>emb|CT010450.15| Mouse DNA sequence from clone RP23-443B9 on chromosome 12, complete
             sequence
          Length = 193155

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   tatccaaactgttttcttca 228
             ||||||||||||||||||||
Sbjct: 83971 tatccaaactgttttcttca 83952

---

>emb|AJ966356.4| Bos taurus partial prlr gene for prolactin receptor, exons 2-10
          Length = 10722

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 cttggaaagtatcctcagca 186
           ||||||||||||||||||||
Sbjct: 389 cttggaaagtatcctcagca 370

---

>gb|AF027403.1|AF027403 Bos taurus prolactin receptor short form mRNA, complete cds
          Length = 2428

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 cttggaaagtatcctcagca 186
           ||||||||||||||||||||
Sbjct: 28  cttggaaagtatcctcagca 9

---

>emb|AL772168.5| Mouse DNA sequence from clone RP23-419B9 on chromosome 4, complete
             sequence
          Length = 128814

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 621   agctgcttctaaaatgacag 640
             ||||||||||||||||||||
Sbjct: 13200 agctgcttctaaaatgacag 13219

---

>emb|AL591404.4| Mouse DNA sequence from clone RP23-394O9 on chromosome 11, complete
             sequence
          Length = 203613

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   taagagttcttgcttttctt 529
             ||||||||||||||||||||
Sbjct: 98438 taagagttcttgcttttctt 98457

---

>gb|L02549.1|BOVPRLR Bos taurus (clone bPRLR 107 and 203) prolactin receptor (PRLR)
           mRNA, complete cds
          Length = 2389

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 cttggaaagtatcctcagca 186
           ||||||||||||||||||||
Sbjct: 28  cttggaaagtatcctcagca 9


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,973,813
Number of Sequences: 3902068
Number of extensions: 6973813
Number of successful extensions: 141270
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141012
Number of HSP's gapped (non-prelim): 257
length of query: 724
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 701
effective length of database: 17,143,297,704
effective search space: 12017451690504
effective search space used: 12017451690504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---