ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 496 e-137
2ref|XM_463442.1| Oryza sativa (japonica cultivar-group), predic... 490 e-135
3gb|AY110244.1| Zea mays CL30761_1 mRNA sequence 454 e-124
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 182 9e-43
5dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 182 9e-43
6dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 182 9e-43
7dbj|AK109619.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
8gb|BT013894.1| Lycopersicon esculentum clone 132881F, mRNA sequence 92 2e-15
9emb|CR751235.5| Zebrafish DNA sequence from clone CH211-240J22 i... 56 1e-04
10emb|CR848717.7| Zebrafish DNA sequence from clone DKEY-148B12 in... 48 0.033
11ref|NM_112487.3| Arabidopsis thaliana AMP binding / catalytic AT... 46 0.13
12ref|XM_741686.1| Aspergillus fumigatus Af293 hypothetical protei... 46 0.13
13gb|BT000771.1| Arabidopsis thaliana clone RAFL08-14-H03 (R11349)... 46 0.13
14gb|AY250842.1| Arabidopsis thaliana acyl-activating enzyme 13 (A... 46 0.13
15gb|AY050378.1| Arabidopsis thaliana AT3g16170/MSL1_21 mRNA, comp... 46 0.13
16emb|BX823446.1|CNS0A5CA Arabidopsis thaliana Full-length cDNA Co... 46 0.13
17gb|AY084636.1| Arabidopsis thaliana clone 113798 mRNA, complete ... 46 0.13
18dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 46 0.13
19emb|AL136456.13| Human DNA sequence from clone RP11-97K3 on chro... 42 2.0
20emb|AL022323.7|HS243E7 Human DNA sequence from clone CTA-243E7 o... 42 2.0
21gb|AC146694.12| Pan troglodytes clone rp43-178l17, complete sequ... 42 2.0
22gb|AC024776.1| Caenorhabditis elegans cosmid Y41D4B, complete se... 40 8.0
23gb|AC151060.4| Bos taurus BAC CH240-293H4 (Children's Hospital ... 40 8.0
24ref|XM_459009.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.0
25gb|AC147140.4| Pan troglodytes BAC clone CH251-329N7 from Y, com... 40 8.0
26gb|AC147154.4| Pan troglodytes BAC clone CH251-175E24 from Y, co... 40 8.0
27gb|AC147120.2| Pan troglodytes BAC clone CH251-531L7 from Y, com... 40 8.0
28gb|AC147119.2| Pan troglodytes BAC clone CH251-518N19 from Y, co... 40 8.0
29gb|AY566624.1| Arceuthobium campylopodum RNA polymerase II secon... 40 8.0
30gb|AY566616.1| Eschscholzia californica RNA polymerase II second... 40 8.0
31gb|AC147668.2| Pan troglodytes BAC clone CH251-120D9 from Y, com... 40 8.0
32emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chro... 40 8.0
33gb|AC147164.2| Pan troglodytes BAC clone CH251-1H10 from Y, comp... 40 8.0
34gb|AC147139.2| Pan troglodytes BAC clone CH251-327B12 from Y, co... 40 8.0
35gb|AC144376.3| Pan troglodytes BAC clone RP43-53D10 from Y, comp... 40 8.0
36emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 8.0
37emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4,... 40 8.0
38emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4,... 40 8.0
39gb|AC147115.4| Pan troglodytes BAC clone CH251-550P11 from chrom... 40 8.0
40gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.0
41gb|AC091589.8| Homo sapiens chromosome 18, clone RP11-635B11, co... 40 8.0
42gb|AC105391.1| Homo sapiens BAC clone RP11-311D14 from 4, comple... 40 8.0
43gb|AC174482.4| Pan troglodytes BAC clone CH251-527O19 from chrom... 40 8.0
44gb|AC160938.2| Pan troglodytes BAC clone CH251-901A9 from chromo... 40 8.0
45dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
46gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold 40 8.0
47gb|AC146461.4| Pan troglodytes BAC clone CH251-49H18 from chromo... 40 8.0
48gb|AC147683.3| Pan troglodytes BAC clone CH251-430O9 from chromo... 40 8.0
49gb|AC157526.2| Pan troglodytes BAC clone CH251-513A15 from chrom... 40 8.0
50gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome... 40 8.0
51gb|AC156014.2| Mus musculus BAC clone RP24-439D9 from chromosome... 40 8.0
52gb|AC068726.5|AC068726 Homo sapiens chromosome 15 clone RP11-844... 40 8.0
53gb|AC090826.15| Homo sapiens chromosome 15, clone CTD-2311M21, c... 40 8.0
54gb|AC023300.19| Homo sapiens chromosome 15, clone RP11-60L3, com... 40 8.0
55gb|AC146246.4| Pan troglodytes BAC clone clone CH251-154C4 from ... 40 8.0
56emb|BX088532.7| Zebrafish DNA sequence from clone CH211-127E17 i... 40 8.0
57gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, co... 40 8.0
58gb|AC129885.3| Didelphis virginiana clone LB3-35M17, complete se... 40 8.0
59gb|AC161006.2| Pan troglodytes BAC clone CH251-842O13 from chrom... 40 8.0
60emb|CT025539.18| Mouse DNA sequence from clone RP23-221K23 on ch... 40 8.0
61gb|AC007794.1|AC007794 Homo sapiens chromosome 19, cosmid F17540... 40 8.0
62gb|AC163729.5| Pan troglodytes BAC clone CH251-1018P19 from chro... 40 8.0
63dbj|AP001591.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.0
64gb|BC082665.1| Xenopus laevis hypothetical LOC494679, mRNA (cDNA... 40 8.0
65emb|BX000993.6| Zebrafish DNA sequence from clone DKEY-88I22 in ... 40 8.0
66gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 40 8.0
67gb|M28600.1|MUSTCRB1X Mouse T cell receptor beta chain, exons 2-5 40 8.0
68dbj|AP000753.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.0 
>dbj|AK071943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087E02, full
            insert sequence
          Length = 1223

 Score =  496 bits (250), Expect = e-137
 Identities = 416/470 (88%), Gaps = 1/470 (0%)
 Strand = Plus / Minus

                                                                        
Query: 123  ctaataacttcttaagctccttcttgttaacctttcccatggcattccgaggaagagaat 182
            ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1014 ctaataatttcttcagctccttcttgttgacctttcccatggcattccgaggaagcgaat 955

                                                                        
Query: 183  cccataa-gtgcagtcttgttggaatcttgtatggagcaagtttatcttttgaccaactt 241
            ||||||| || ||  || || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 954  cccataatgtacaacctcgtaggaatcttgtatggagcaagcttatcttttgaccaactt 895

                                                                        
Query: 242  gtcaatgcttctaaggtcagtgctggcttcgaagcctgttcggccctttcccttgcgtcc 301
            |||| |||||| |||||||||||||| |||||  || |||| || |||| | ||| ||||
Sbjct: 894  gtcagtgcttccaaggtcagtgctggtttcgagtccagttcagctcttttctttgagtcc 835

                                                                        
Query: 302  tccttaggcacaattattgcacatataacctccccataagcttcatcaggcaagccaaga 361
            ||||||||||||||||||||||| |||| ||| ||||||||||| ||||| ||||| |||
Sbjct: 834  tccttaggcacaattattgcacagataatctctccataagcttcgtcaggtaagccgaga 775

                                                                        
Query: 362  acagcacactccagtacagtgtcgtgctccaacagaaccgcctcaatttctaatgctgat 421
            |||||||| ||||| ||| | || ||||  ||||| || | ||||||||||||||| || 
Sbjct: 774  acagcacattccaggacaatttcatgctgtaacagcactgactcaatttctaatgcagac 715

                                                                        
Query: 422  aacttgtaaccaccaactttcatgatgtcagcatttgtgcgccctaaaattataaaatat 481
            | ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 714  agcttataaccaccaactttcatgatgtcagcatttgtgcgccctaaaattatgaaatat 655

                                                                        
Query: 482  ccatcctcgtctacagttacagtatcaccagtcttgaagaacccaccatcgataaatgat 541
            || |  |||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 654  cctttatcgtctacagttactgtatcaccagtcttgaagaacccaccatcaataaatgat 595

                                                              
Query: 542  tctgcagtaacctctggtcttttccagtactctttgaaaagggatggact 591
            |||||||||||||||||| || |||| || || || ||||||||||||||
Sbjct: 594  tctgcagtaacctctggttttctccaatattccttaaaaagggatggact 545
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>ref|XM_463442.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1809

 Score =  490 bits (247), Expect = e-135
 Identities = 385/431 (89%)
 Strand = Plus / Minus

                                                                        
Query: 123  ctaataacttcttaagctccttcttgttaacctttcccatggcattccgaggaagagaat 182
            ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1801 ctaataatttcttcagctccttcttgttgacctttcccatggcattccgaggaagcgaat 1742

                                                                        
Query: 183  cccataagtgcagtcttgttggaatcttgtatggagcaagtttatcttttgaccaacttg 242
            ||||||||| ||  || || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 1741 cccataagtacaacctcgtaggaatcttgtatggagcaagcttatcttttgaccaacttg 1682

                                                                        
Query: 243  tcaatgcttctaaggtcagtgctggcttcgaagcctgttcggccctttcccttgcgtcct 302
            ||| |||||| |||||||||||||| |||||  || |||| || |||| | ||| |||||
Sbjct: 1681 tcagtgcttccaaggtcagtgctggtttcgagtccagttcagctcttttctttgagtcct 1622

                                                                        
Query: 303  ccttaggcacaattattgcacatataacctccccataagcttcatcaggcaagccaagaa 362
            |||||||||||||||||||||| |||| ||| ||||||||||| ||||| ||||| ||||
Sbjct: 1621 ccttaggcacaattattgcacagataatctctccataagcttcgtcaggtaagccgagaa 1562

                                                                        
Query: 363  cagcacactccagtacagtgtcgtgctccaacagaaccgcctcaatttctaatgctgata 422
            ||||||| ||||| ||| | || ||||  ||||| || | ||||||||||||||| || |
Sbjct: 1561 cagcacattccaggacaatttcatgctgtaacagcactgactcaatttctaatgcagaca 1502

                                                                        
Query: 423  acttgtaaccaccaactttcatgatgtcagcatttgtgcgccctaaaattataaaatatc 482
             ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1501 gcttataaccaccaactttcatgatgtcagcatttgtgcgccctaaaattatgaaatatc 1442

                                                                        
Query: 483  catcctcgtctacagttacagtatcaccagtcttgaagaacccaccatcgataaatgatt 542
            | || |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1441 cttcatcgtctacagttactgtatcaccagtcttgaagaacccaccatcaataaatgatt 1382

                       
Query: 543  ctgcagtaacc 553
            |||||||||||
Sbjct: 1381 ctgcagtaacc 1371
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>gb|AY110244.1| Zea mays CL30761_1 mRNA sequence
          Length = 781

 Score =  454 bits (229), Expect = e-124
 Identities = 395/452 (87%)
 Strand = Plus / Plus

                                                                       
Query: 131 ttcttaagctccttcttgttaacctttcccatggcattccgaggaagagaatcccataag 190
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ttcttcagctccttcttgttaacctttcccatggcattccgaggaagagaatcccacaag 260

                                                                       
Query: 191 tgcagtcttgttggaatcttgtatggagcaagtttatcttttgaccaacttgtcaatgct 250
           |  ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 261 tatagtcttgttggaatcttgtatggagcaagcttatctttcgaccaacttgttaatgct 320

                                                                       
Query: 251 tctaaggtcagtgctggcttcgaagcctgttcggccctttcccttgcgtcctccttaggc 310
           || ||||| || |||||||| ||  ||||| | |||     | |||| ||||||||||||
Sbjct: 321 tccaaggttagcgctggctttgagtcctgtccagccnnnnnctttgcatcctccttaggc 380

                                                                       
Query: 311 acaattattgcacatataacctccccataagcttcatcaggcaagccaagaacagcacac 370
           ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| 
Sbjct: 381 acaattattgcacatataacctccccataggcttcatcaggcaagccaaggacagcacat 440

                                                                       
Query: 371 tccagtacagtgtcgtgctccaacagaaccgcctcaatttctaatgctgataacttgtaa 430
           ||||||||||  || ||||| ||||| || |||||||||||||||||||| | |||||||
Sbjct: 441 tccagtacagcatcatgctctaacagtactgcctcaatttctaatgctgacagcttgtaa 500

                                                                       
Query: 431 ccaccaactttcatgatgtcagcatttgtgcgccctaaaattataaaatatccatcctcg 490
           || |||| |||||| ||||| ||||||||||| || |||||||| || ||||| ||||| 
Sbjct: 501 ccgccaaatttcataatgtcggcatttgtgcgtcccaaaattatgaagtatccttcctca 560

                                                                       
Query: 491 tctacagttacagtatcaccagtcttgaagaacccaccatcgataaatgattctgcagta 550
           ||||||||||| |||||||| ||||||||||| || ||||| || || |||||||  || 
Sbjct: 561 tctacagttactgtatcacctgtcttgaagaatcctccatcaatgaaagattctggtgtc 620

                                           
Query: 551 acctctggtcttttccagtactctttgaaaag 582
            | |||||||||||||| ||||| ||||||||
Sbjct: 621 tcgtctggtcttttccaatactccttgaaaag 652
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  182 bits (92), Expect = 9e-43
 Identities = 149/168 (88%)
 Strand = Plus / Minus

                                                                            
Query: 208      cttgtatggagcaagtttatcttttgaccaacttgtcaatgcttctaaggtcagtgctgg 267
                ||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 32025187 cttgtatggagcaagcttatcttttgaccaacttgtcagtgcttccaaggtcagtgctgg 32025128

                                                                            
Query: 268      cttcgaagcctgttcggccctttcccttgcgtcctccttaggcacaattattgcacatat 327
                 |||||  || |||| || |||| | ||| ||||||||||||||||||||||||||| ||
Sbjct: 32025127 tttcgagtccagttcagctcttttctttgagtcctccttaggcacaattattgcacagat 32025068

                                                                
Query: 328      aacctccccataagcttcatcaggcaagccaagaacagcacactccag 375
                || ||| ||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 32025067 aatctctccataagcttcgtcaggtaagccgagaacagcacattccag 32025020



 Score =  147 bits (74), Expect = 5e-32
 Identities = 89/94 (94%)
 Strand = Plus / Minus

                                                                            
Query: 461      cgccctaaaattataaaatatccatcctcgtctacagttacagtatcaccagtcttgaag 520
                |||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 32024579 cgccctaaaattatgaaatatccttcatcgtctacagttactgtatcaccagtcttgaag 32024520

                                                  
Query: 521      aacccaccatcgataaatgattctgcagtaacct 554
                ||||||||||| ||||||||||||||||||||||
Sbjct: 32024519 aacccaccatcaataaatgattctgcagtaacct 32024486



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 403      ctcaatttctaatgctgataacttgtaaccaccaactttcatgatgtcagcatttgtgc 461
                ||||||||||||||| || | ||| ||||||||||||||||||||||||||||||||||
Sbjct: 32024751 ctcaatttctaatgcagacagcttataaccaccaactttcatgatgtcagcatttgtgc 32024693



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                        
Query: 152      acctttcccatggcattccgaggaagagaatcccataagt 191
                |||||||||||||||||||||||||| |||||||||||||
Sbjct: 32025575 acctttcccatggcattccgaggaagcgaatcccataagt 32025536



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 123      ctaataacttcttaagctccttcttgttaacct 155
                ||||||| ||||| |||||||||||||| ||||
Sbjct: 32025673 ctaataatttcttcagctccttcttgttgacct 32025641
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>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0512C01
          Length = 176261

 Score =  182 bits (92), Expect = 9e-43
 Identities = 149/168 (88%)
 Strand = Plus / Minus

                                                                         
Query: 208   cttgtatggagcaagtttatcttttgaccaacttgtcaatgcttctaaggtcagtgctgg 267
             ||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 67001 cttgtatggagcaagcttatcttttgaccaacttgtcagtgcttccaaggtcagtgctgg 66942

                                                                         
Query: 268   cttcgaagcctgttcggccctttcccttgcgtcctccttaggcacaattattgcacatat 327
              |||||  || |||| || |||| | ||| ||||||||||||||||||||||||||| ||
Sbjct: 66941 tttcgagtccagttcagctcttttctttgagtcctccttaggcacaattattgcacagat 66882

                                                             
Query: 328   aacctccccataagcttcatcaggcaagccaagaacagcacactccag 375
             || ||| ||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 66881 aatctctccataagcttcgtcaggtaagccgagaacagcacattccag 66834



 Score =  147 bits (74), Expect = 5e-32
 Identities = 89/94 (94%)
 Strand = Plus / Minus

                                                                         
Query: 461   cgccctaaaattataaaatatccatcctcgtctacagttacagtatcaccagtcttgaag 520
             |||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 66393 cgccctaaaattatgaaatatccttcatcgtctacagttactgtatcaccagtcttgaag 66334

                                               
Query: 521   aacccaccatcgataaatgattctgcagtaacct 554
             ||||||||||| ||||||||||||||||||||||
Sbjct: 66333 aacccaccatcaataaatgattctgcagtaacct 66300



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                        
Query: 403   ctcaatttctaatgctgataacttgtaaccaccaactttcatgatgtcagcatttgtgc 461
             ||||||||||||||| || | ||| ||||||||||||||||||||||||||||||||||
Sbjct: 66565 ctcaatttctaatgcagacagcttataaccaccaactttcatgatgtcagcatttgtgc 66507



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                     
Query: 152   acctttcccatggcattccgaggaagagaatcccataagt 191
             |||||||||||||||||||||||||| |||||||||||||
Sbjct: 67389 acctttcccatggcattccgaggaagcgaatcccataagt 67350



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 123   ctaataacttcttaagctccttcttgttaacct 155
             ||||||| ||||| |||||||||||||| ||||
Sbjct: 67487 ctaataatttcttcagctccttcttgttgacct 67455
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>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0460E08
          Length = 170021

 Score =  182 bits (92), Expect = 9e-43
 Identities = 149/168 (88%)
 Strand = Plus / Minus

                                                                          
Query: 208    cttgtatggagcaagtttatcttttgaccaacttgtcaatgcttctaaggtcagtgctgg 267
              ||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 121914 cttgtatggagcaagcttatcttttgaccaacttgtcagtgcttccaaggtcagtgctgg 121855

                                                                          
Query: 268    cttcgaagcctgttcggccctttcccttgcgtcctccttaggcacaattattgcacatat 327
               |||||  || |||| || |||| | ||| ||||||||||||||||||||||||||| ||
Sbjct: 121854 tttcgagtccagttcagctcttttctttgagtcctccttaggcacaattattgcacagat 121795

                                                              
Query: 328    aacctccccataagcttcatcaggcaagccaagaacagcacactccag 375
              || ||| ||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 121794 aatctctccataagcttcgtcaggtaagccgagaacagcacattccag 121747



 Score =  147 bits (74), Expect = 5e-32
 Identities = 89/94 (94%)
 Strand = Plus / Minus

                                                                          
Query: 461    cgccctaaaattataaaatatccatcctcgtctacagttacagtatcaccagtcttgaag 520
              |||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 121306 cgccctaaaattatgaaatatccttcatcgtctacagttactgtatcaccagtcttgaag 121247

                                                
Query: 521    aacccaccatcgataaatgattctgcagtaacct 554
              ||||||||||| ||||||||||||||||||||||
Sbjct: 121246 aacccaccatcaataaatgattctgcagtaacct 121213



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                         
Query: 403    ctcaatttctaatgctgataacttgtaaccaccaactttcatgatgtcagcatttgtgc 461
              ||||||||||||||| || | ||| ||||||||||||||||||||||||||||||||||
Sbjct: 121478 ctcaatttctaatgcagacagcttataaccaccaactttcatgatgtcagcatttgtgc 121420



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                      
Query: 152    acctttcccatggcattccgaggaagagaatcccataagt 191
              |||||||||||||||||||||||||| |||||||||||||
Sbjct: 122302 acctttcccatggcattccgaggaagcgaatcccataagt 122263



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 123    ctaataacttcttaagctccttcttgttaacct 155
              ||||||| ||||| |||||||||||||| ||||
Sbjct: 122400 ctaataatttcttcagctccttcttgttgacct 122368
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>dbj|AK109619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-A03, full
           insert sequence
          Length = 2768

 Score =  105 bits (53), Expect = 2e-19
 Identities = 65/69 (94%)
 Strand = Plus / Minus

                                                                       
Query: 123 ctaataacttcttaagctccttcttgttaacctttcccatggcattccgaggaagagaat 182
           ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 174 ctaataatttcttcagctccttcttgttgacctttcccatggcattccgaggaagcgaat 115

                    
Query: 183 cccataagt 191
           |||||||||
Sbjct: 114 cccataagt 106
to top
>gb|BT013894.1| Lycopersicon esculentum clone 132881F, mRNA sequence
          Length = 2153

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 112/134 (83%)
 Strand = Plus / Minus

                                                                        
Query: 386  tgctccaacagaaccgcctcaatttctaatgctgataacttgtaaccaccaactttcatg 445
            |||||||||||||| || |||||||| || |||||||| ||||| |||||||  ||||| 
Sbjct: 1553 tgctccaacagaactgcttcaatttccaacgctgataatttgtatccaccaaacttcata 1494

                                                                        
Query: 446  atgtcagcatttgtgcgccctaaaattataaaatatccatcctcgtctacagttacagta 505
            || ||||||||||| || |||| ||| ||  |||| || || ||||| ||||| ||||||
Sbjct: 1493 atatcagcatttgtacgtcctagaatgatgtaatacccctcttcgtcaacagtaacagta 1434

                          
Query: 506  tcaccagtcttgaa 519
            || |||||||||||
Sbjct: 1433 tctccagtcttgaa 1420



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 137  agctccttcttgttaacctttcccatggcattccgagg 174
            ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 1802 agctctttcttgtttacctttcccatcgcatttcgagg 1765
to top
>emb|CR751235.5| Zebrafish DNA sequence from clone CH211-240J22 in linkage group 4,
             complete sequence
          Length = 104632

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 415   tgctgataacttgtaaccaccaactttcatga 446
             |||||| |||||||||||||||||||||||||
Sbjct: 12430 tgctgaaaacttgtaaccaccaactttcatga 12461
to top
>emb|CR848717.7| Zebrafish DNA sequence from clone DKEY-148B12 in linkage group 5,
              complete sequence
          Length = 207800

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 413    aatgctgataacttgtaaccaccaactttcat 444
              |||||||| ||| |||||||||||||||||||
Sbjct: 134107 aatgctgaaaacctgtaaccaccaactttcat 134076
to top
>ref|NM_112487.3| Arabidopsis thaliana AMP binding / catalytic AT3G16170 mRNA, complete
            cds
          Length = 1980

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 407  atttctaatgctgataacttgtaaccaccaactttcatgatgtcagc 453
            |||||||| || ||||||||||| || ||||| ||||| ||||||||
Sbjct: 1508 atttctaaggcagataacttgtatcctccaaccttcataatgtcagc 1462



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 131  ttcttaagctccttcttgttaacctttcccatggcattccgagg 174
            ||||| ||||| || ||||| |||||||||||||| || |||||
Sbjct: 1784 ttctttagctcttttttgttcacctttcccatggcgttgcgagg 1741
to top
>ref|XM_741686.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g01530) partial
            mRNA
          Length = 1845

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 142  cttcttgttaacctttcccatggcatt 168
            ||||||||| |||||||||||||||||
Sbjct: 1815 cttcttgtttacctttcccatggcatt 1789
to top
>gb|BT000771.1| Arabidopsis thaliana clone RAFL08-14-H03 (R11349) putative long-chain
            acyl-CoA synthetase (At3g16170) mRNA, complete cds
          Length = 1943

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 407  atttctaatgctgataacttgtaaccaccaactttcatgatgtcagc 453
            |||||||| || ||||||||||| || ||||| ||||| ||||||||
Sbjct: 1454 atttctaaggcagataacttgtatcctccaaccttcataatgtcagc 1408



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 131  ttcttaagctccttcttgttaacctttcccatggcattccgagg 174
            ||||| ||||| || ||||| |||||||||||||| || |||||
Sbjct: 1730 ttctttagctcttttttgttcacctttcccatggcgttgcgagg 1687
to top
>gb|AY250842.1| Arabidopsis thaliana acyl-activating enzyme 13 (At3g16170) mRNA,
            complete cds
          Length = 1635

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 407  atttctaatgctgataacttgtaaccaccaactttcatgatgtcagc 453
            |||||||| || ||||||||||| || ||||| ||||| ||||||||
Sbjct: 1337 atttctaaggcagataacttgtatcctccaaccttcataatgtcagc 1291



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 131  ttcttaagctccttcttgttaacctttcccatggcattccgagg 174
            ||||| ||||| || ||||| |||||||||||||| || |||||
Sbjct: 1613 ttctttagctcttttttgttcacctttcccatggcgttgcgagg 1570
to top
>gb|AY050378.1| Arabidopsis thaliana AT3g16170/MSL1_21 mRNA, complete cds
          Length = 1568

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 407  atttctaatgctgataacttgtaaccaccaactttcatgatgtcagc 453
            |||||||| || ||||||||||| || ||||| ||||| ||||||||
Sbjct: 1457 atttctaaggcagataacttgtatcctccaaccttcataatgtcagc 1411
to top
>emb|BX823446.1|CNS0A5CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS3ZD04 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1920

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 407  atttctaatgctgataacttgtaaccaccaactttcatgatgtcagc 453
            |||||||| || ||||||||||| || ||||| ||||| ||||||||
Sbjct: 1499 atttctaaggcagataacttgtatcctccaaccttcataatgtcagc 1453



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 131  ttcttaagctccttcttgttaacctttcccatggcattccgagg 174
            ||||| ||||| || ||||| |||||||||||||| || |||||
Sbjct: 1775 ttctttagctcttttttgttcacctttcccatggcgttgcgagg 1732
to top
>gb|AY084636.1| Arabidopsis thaliana clone 113798 mRNA, complete sequence
          Length = 1896

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 407  atttctaatgctgataacttgtaaccaccaactttcatgatgtcagc 453
            |||||||| || ||||||||||| || ||||| ||||| ||||||||
Sbjct: 1459 atttctaaggcagataacttgtatcctccaaccttcataatgtcagc 1413



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 131  ttcttaagctccttcttgttaacctttcccatggcattccgagg 174
            ||||| ||||| || ||||| |||||||||||||| || |||||
Sbjct: 1735 ttctttagctcttttttgttcacctttcccatggcgttgcgagg 1692
to top
>dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSL1
          Length = 79355

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 407   atttctaatgctgataacttgtaaccaccaactttcatgatgtcagc 453
             |||||||| || ||||||||||| || ||||| ||||| ||||||||
Sbjct: 71697 atttctaaggcagataacttgtatcctccaaccttcataatgtcagc 71651
to top
>emb|AL136456.13| Human DNA sequence from clone RP11-97K3 on chromosome 1q31.1-31.3,
             complete sequence
          Length = 158745

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 466   taaaattataaaatatccatc 486
             |||||||||||||||||||||
Sbjct: 20670 taaaattataaaatatccatc 20690
to top
>emb|AL022323.7|HS243E7 Human DNA sequence from clone CTA-243E7 on chromosome 22q12.1, complete
              sequence
          Length = 183113

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    aagccaagaacagcacactcc 373
              |||||||||||||||||||||
Sbjct: 169065 aagccaagaacagcacactcc 169045
to top
>gb|AC146694.12| Pan troglodytes clone rp43-178l17, complete sequence
          Length = 229508

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 353   aagccaagaacagcacactcc 373
             |||||||||||||||||||||
Sbjct: 67076 aagccaagaacagcacactcc 67056
to top
>gb|AC024776.1| Caenorhabditis elegans cosmid Y41D4B, complete sequence
          Length = 138020

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   tttgaccaacttgtcaatgc 249
             ||||||||||||||||||||
Sbjct: 34802 tttgaccaacttgtcaatgc 34821
to top
>gb|AC151060.4| Bos taurus  BAC CH240-293H4 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 160650

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   ggaagagaatcccataagtg 192
             ||||||||||||||||||||
Sbjct: 55123 ggaagagaatcccataagtg 55142
to top
>ref|XM_459009.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D13618g)
           partial mRNA
          Length = 1440

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 acgtggctacacctctaata 128
           ||||||||||||||||||||
Sbjct: 418 acgtggctacacctctaata 399
to top
>gb|AC147140.4| Pan troglodytes BAC clone CH251-329N7 from Y, complete sequence
          Length = 149061

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    aaaattataaaatatccatc 486
              ||||||||||||||||||||
Sbjct: 108560 aaaattataaaatatccatc 108541
to top
>gb|AC147154.4| Pan troglodytes BAC clone CH251-175E24 from Y, complete sequence
          Length = 157260

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 467   aaaattataaaatatccatc 486
             ||||||||||||||||||||
Sbjct: 20031 aaaattataaaatatccatc 20012
to top
>gb|AC147120.2| Pan troglodytes BAC clone CH251-531L7 from Y, complete sequence
          Length = 175034

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 467   aaaattataaaatatccatc 486
             ||||||||||||||||||||
Sbjct: 43958 aaaattataaaatatccatc 43939
to top
>gb|AC147119.2| Pan troglodytes BAC clone CH251-518N19 from Y, complete sequence
          Length = 241976

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    aaaattataaaatatccatc 486
              ||||||||||||||||||||
Sbjct: 102998 aaaattataaaatatccatc 102979
to top
>gb|AY566624.1| Arceuthobium campylopodum RNA polymerase II second largest subunit
            (RPB2) gene, partial cds
          Length = 4272

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  cacctctaataacttcttaa 137
            ||||||||||||||||||||
Sbjct: 3994 cacctctaataacttcttaa 4013
to top
>gb|AY566616.1| Eschscholzia californica RNA polymerase II second largest subunit
            (RPB2) gene, partial cds
          Length = 3466

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  cacctctaataacttcttaa 137
            ||||||||||||||||||||
Sbjct: 3186 cacctctaataacttcttaa 3205
to top
>gb|AC147668.2| Pan troglodytes BAC clone CH251-120D9 from Y, complete sequence
          Length = 181148

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    aaaattataaaatatccatc 486
              ||||||||||||||||||||
Sbjct: 177066 aaaattataaaatatccatc 177047
to top
>emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chromosome 16, complete
              sequence
          Length = 212227

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    taaaattataaaatatccat 485
              ||||||||||||||||||||
Sbjct: 142147 taaaattataaaatatccat 142166
to top
>gb|AC147164.2| Pan troglodytes BAC clone CH251-1H10 from Y, complete sequence
          Length = 188603

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   aaaattataaaatatccatc 486
             ||||||||||||||||||||
Sbjct: 20879 aaaattataaaatatccatc 20898
to top
>gb|AC147139.2| Pan troglodytes BAC clone CH251-327B12 from Y, complete sequence
          Length = 165128

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    aaaattataaaatatccatc 486
              ||||||||||||||||||||
Sbjct: 139454 aaaattataaaatatccatc 139435
to top
>gb|AC144376.3| Pan troglodytes BAC clone RP43-53D10 from Y, complete sequence
          Length = 212954

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    aaaattataaaatatccatc 486
              ||||||||||||||||||||
Sbjct: 209416 aaaattataaaatatccatc 209397
to top
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
               hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 109     acgtggctacacctctaata 128
               ||||||||||||||||||||
Sbjct: 1033357 acgtggctacacctctaata 1033376
to top
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
              complete sequence
          Length = 129037

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    gcacaattattgcacatata 328
              ||||||||||||||||||||
Sbjct: 114081 gcacaattattgcacatata 114062
to top
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09,
             complete sequence
          Length = 152732

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gcacaattattgcacatata 328
             ||||||||||||||||||||
Sbjct: 42104 gcacaattattgcacatata 42085
to top
>gb|AC147115.4| Pan troglodytes BAC clone CH251-550P11 from chromosome y, complete
            sequence
          Length = 200911

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 467  aaaattataaaatatccatc 486
            ||||||||||||||||||||
Sbjct: 3539 aaaattataaaatatccatc 3558
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 467      aaaattataaaatatccatc 486
                ||||||||||||||||||||
Sbjct: 12563035 aaaattataaaatatccatc 12563016



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 467      aaaattataaaatatccatc 486
                ||||||||||||||||||||
Sbjct: 11851755 aaaattataaaatatccatc 11851774



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 467      aaaattataaaatatccatc 486
                ||||||||||||||||||||
Sbjct: 10482133 aaaattataaaatatccatc 10482152



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 467      aaaattataaaatatccatc 486
                ||||||||||||||||||||
Sbjct: 10330943 aaaattataaaatatccatc 10330924



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 467     aaaattataaaatatccatc 486
               ||||||||||||||||||||
Sbjct: 5341740 aaaattataaaatatccatc 5341759



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 467     aaaattataaaatatccatc 486
               ||||||||||||||||||||
Sbjct: 3928501 aaaattataaaatatccatc 3928520



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 467     aaaattataaaatatccatc 486
               ||||||||||||||||||||
Sbjct: 3867978 aaaattataaaatatccatc 3867997



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 467     aaaattataaaatatccatc 486
               ||||||||||||||||||||
Sbjct: 2369439 aaaattataaaatatccatc 2369420



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 467     aaaattataaaatatccatc 486
               ||||||||||||||||||||
Sbjct: 1679853 aaaattataaaatatccatc 1679872
to top
>gb|AC091589.8| Homo sapiens chromosome 18, clone RP11-635B11, complete sequence
          Length = 177680

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   caactttcatgatgtcagca 454
             ||||||||||||||||||||
Sbjct: 50033 caactttcatgatgtcagca 50014
to top
>gb|AC105391.1| Homo sapiens BAC clone RP11-311D14 from 4, complete sequence
          Length = 143498

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 466   taaaattataaaatatccat 485
             ||||||||||||||||||||
Sbjct: 20891 taaaattataaaatatccat 20910
to top
>gb|AC174482.4| Pan troglodytes BAC clone CH251-527O19 from chromosome y, complete
             sequence
          Length = 189332

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 467   aaaattataaaatatccatc 486
             ||||||||||||||||||||
Sbjct: 50315 aaaattataaaatatccatc 50296
to top
>gb|AC160938.2| Pan troglodytes BAC clone CH251-901A9 from chromosome y, complete
             sequence
          Length = 212330

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 467   aaaattataaaatatccatc 486
             ||||||||||||||||||||
Sbjct: 84458 aaaattataaaatatccatc 84439
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 309      gcacaattattgcacatata 328
                ||||||||||||||||||||
Sbjct: 30638373 gcacaattattgcacatata 30638354
to top
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 28      atagaacaaaattattagctgaca 51
               |||||| |||||||||||||||||
Sbjct: 1394952 atagaataaaattattagctgaca 1394929
to top
>gb|AC146461.4| Pan troglodytes BAC clone CH251-49H18 from chromosome y, complete
            sequence
          Length = 170814

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 467  aaaattataaaatatccatc 486
            ||||||||||||||||||||
Sbjct: 3471 aaaattataaaatatccatc 3490
to top
>gb|AC147683.3| Pan troglodytes BAC clone CH251-430O9 from chromosome y, complete
              sequence
          Length = 176384

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    aaaattataaaatatccatc 486
              ||||||||||||||||||||
Sbjct: 150669 aaaattataaaatatccatc 150650
to top
>gb|AC157526.2| Pan troglodytes BAC clone CH251-513A15 from chromosome unknown,
             complete sequence
          Length = 188881

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   aatttctaatgctgataact 425
             ||||||||||||||||||||
Sbjct: 44481 aatttctaatgctgataact 44500
to top
>gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome 12, complete sequence
          Length = 167631

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   aagccaagaacagcacactc 372
             ||||||||||||||||||||
Sbjct: 22816 aagccaagaacagcacactc 22835
to top
>gb|AC156014.2| Mus musculus BAC clone RP24-439D9 from chromosome 16, complete sequence
          Length = 194272

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    taaaattataaaatatccat 485
              ||||||||||||||||||||
Sbjct: 180931 taaaattataaaatatccat 180912
to top
>gb|AC068726.5|AC068726 Homo sapiens chromosome 15 clone RP11-844G16 map 15q21.3, complete
             sequence
          Length = 189308

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   aatttctaatgctgataact 425
             ||||||||||||||||||||
Sbjct: 64638 aatttctaatgctgataact 64619
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>gb|AC090826.15| Homo sapiens chromosome 15, clone CTD-2311M21, complete sequence
          Length = 169518

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    ttattagctgacactgctatatgt 62
             ||||||||||||||| ||||||||
Sbjct: 19396 ttattagctgacacttctatatgt 19419
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>gb|AC023300.19| Homo sapiens chromosome 15, clone RP11-60L3, complete sequence
          Length = 147392

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    ttattagctgacactgctatatgt 62
             ||||||||||||||| ||||||||
Sbjct: 41665 ttattagctgacacttctatatgt 41642
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>gb|AC146246.4| Pan troglodytes BAC clone clone CH251-154C4 from y, complete sequence
          Length = 149616

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    aaaattataaaatatccatc 486
              ||||||||||||||||||||
Sbjct: 129595 aaaattataaaatatccatc 129614
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>emb|BX088532.7| Zebrafish DNA sequence from clone CH211-127E17 in linkage group 8,
             complete sequence
          Length = 115792

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 465   ctaaaattataaaatatccatcct 488
             ||||||| ||||||||||||||||
Sbjct: 64164 ctaaaatcataaaatatccatcct 64141
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>gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, complete sequence
          Length = 136530

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 466   taaaattataaaatatccat 485
             ||||||||||||||||||||
Sbjct: 36632 taaaattataaaatatccat 36651
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>gb|AC129885.3| Didelphis virginiana clone LB3-35M17, complete sequence
          Length = 164861

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    aaaataggtacatcaatgta 107
             ||||||||||||||||||||
Sbjct: 87331 aaaataggtacatcaatgta 87312
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>gb|AC161006.2| Pan troglodytes BAC clone CH251-842O13 from chromosome y, complete
              sequence
          Length = 201209

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    aaaattataaaatatccatc 486
              ||||||||||||||||||||
Sbjct: 130403 aaaattataaaatatccatc 130422
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>emb|CT025539.18| Mouse DNA sequence from clone RP23-221K23 on chromosome 12, complete
             sequence
          Length = 167603

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   aagccaagaacagcacactc 372
             ||||||||||||||||||||
Sbjct: 14227 aagccaagaacagcacactc 14208
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>gb|AC007794.1|AC007794 Homo sapiens chromosome 19, cosmid F17540, complete sequence
          Length = 39387

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   ttcatgatgtcagcatttgt 459
             ||||||||||||||||||||
Sbjct: 16101 ttcatgatgtcagcatttgt 16082
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>gb|AC163729.5| Pan troglodytes BAC clone CH251-1018P19 from chromosome y, complete
             sequence
          Length = 196073

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 467   aaaattataaaatatccatc 486
             ||||||||||||||||||||
Sbjct: 20766 aaaattataaaatatccatc 20747
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>dbj|AP001591.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-838I13, complete
              sequence
          Length = 178982

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 463    ccctaaaattataaaatatccatc 486
              ||||||||||| ||||||||||||
Sbjct: 161354 ccctaaaattaaaaaatatccatc 161377
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>gb|BC082665.1| Xenopus laevis hypothetical LOC494679, mRNA (cDNA clone
            IMAGE:6862636), partial cds
          Length = 2265

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 191  tgcagtcttgttggaatctt 210
            ||||||||||||||||||||
Sbjct: 2054 tgcagtcttgttggaatctt 2035
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>emb|BX000993.6| Zebrafish DNA sequence from clone DKEY-88I22 in linkage group 1, complete
              sequence
          Length = 203257

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     ttattagctgacactgctat 58
              ||||||||||||||||||||
Sbjct: 189792 ttattagctgacactgctat 189811
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>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     aaaataggtacatcaatgta 107
              ||||||||||||||||||||
Sbjct: 714610 aaaataggtacatcaatgta 714591
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>gb|M28600.1|MUSTCRB1X Mouse T cell receptor beta chain, exons 2-5
          Length = 1865

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 329  acctccccataagcttcatc 348
            ||||||||||||||||||||
Sbjct: 1362 acctccccataagcttcatc 1343
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>dbj|AP000753.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-697H9, complete
             sequence
          Length = 184057

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 463   ccctaaaattataaaatatccatc 486
             ||||||||||| ||||||||||||
Sbjct: 64044 ccctaaaattaaaaaatatccatc 64067


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,422,371
Number of Sequences: 3902068
Number of extensions: 5422371
Number of successful extensions: 107715
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107374
Number of HSP's gapped (non-prelim): 339
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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