ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL160401.12| Human DNA sequence from clone RP11-442J1 on chr... 48 0.029
2gb|AC153865.3| Mus musculus BAC RP23-373P9 (Roswell Park Cancer... 44 0.46
3emb|CT025598.9| Mouse DNA sequence from clone RP23-218L3 on chro... 44 0.46
4gb|AC132256.3| Mus musculus BAC clone RP24-358I7 from chromosome... 44 0.46
5gb|AC016113.9| Homo sapiens, clone RP11-26P22, complete sequence 44 0.46
6gb|AC175538.1| Mus musculus BAC clone RP24-476A4 from chromosome... 44 0.46
7gb|M16110.1|HUMAFP Homo sapiens alpha-fetoprotein gene, complete... 44 0.46
8ref|XM_422127.1| PREDICTED: Gallus gallus similar to solute carr... 42 1.8
9gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete s... 42 1.8
10emb|AL499617.16| Human DNA sequence from clone RP11-312I14 on ch... 42 1.8
11emb|BX936333.10| Zebrafish DNA sequence from clone CH211-90O16 i... 42 1.8
12gb|AC112193.2| Homo sapiens chromosome 5 clone RP11-373F8, compl... 42 1.8
13emb|CR352514.1| Gallus gallus finished cDNA, clone ChEST824n12 42 1.8
14emb|BX932462.1| Gallus gallus finished cDNA, clone ChEST621n23 42 1.8
15emb|BX929674.1| Gallus gallus finished cDNA, clone ChEST792g18 42 1.8
16gb|AC093412.3| Homo sapiens chromosome 3 clone RP11-11L6, comple... 42 1.8
17gb|AC161465.3| Gallus gallus BAC clone CH261-97D4 from chromosom... 42 1.8
18dbj|AP006081.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 1.8
19gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6... 40 7.1
20gb|AC163669.2| Mus musculus BAC clone RP23-29H1 from chromosome ... 40 7.1
21gb|AC164538.4| Mus musculus chromosome 5, clone RP24-324L19, com... 40 7.1
22gb|AC146249.2| Pan troglodytes BAC clone CH251-140O11 from Y, co... 40 7.1
23gb|AC132134.2| Mus musculus BAC clone RP23-267P6 from chromosome... 40 7.1
24gb|AC162307.5| Mus musculus BAC clone RP23-271I2 from chromosome... 40 7.1
25emb|AL442647.18| Human DNA sequence from clone RP11-72I18 on chr... 40 7.1
26emb|AL117341.26|HSBA512N4 Human DNA sequence from clone RP11-512... 40 7.1
27emb|BX255918.16| Zebrafish DNA sequence from clone CH211-239I2 i... 40 7.1
28gb|AC016883.14| Homo sapiens chromosome 8, clone RP11-327N12, co... 40 7.1
29gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome... 40 7.1
30dbj|BS000619.1| Pan troglodytes chromosome Y clone:PTB-493L21, c... 40 7.1
31dbj|BS000603.1| Pan troglodytes chromosome Y clone:PTB-616H14, c... 40 7.1
32gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.1
33gb|AC018714.4| Homo sapiens BAC clone RP11-382A18 from 8, comple... 40 7.1
34gb|AC022523.7| Homo sapiens chromosome 15, clone RP11-183E24, co... 40 7.1
35gb|AY624368.1| Branchiostoma belcheri tsingtaunese lysozyme C (A... 40 7.1
36gb|AC092078.2|AC092078 Homo sapiens chromosome 15 clone CTD-2007... 40 7.1
37gb|AC148711.1| Macaca mulatta Major Histocompatibility Complex B... 40 7.1
38gb|AC148674.1| Macaca mulatta Major Histocompatibility Complex B... 40 7.1
39gb|AC025167.6|AC025167 Homo sapiens chromosome 15 clone CTD-2556... 40 7.1
40gb|AC073465.5| Homo sapiens BAC clone RP11-158L8 from 2, complet... 40 7.1
41emb|BX005263.10| Mouse DNA sequence from clone RP23-395K13 on ch... 40 7.1
42emb|CR847530.19| Zebrafish DNA sequence from clone DKEY-14I17 in... 40 7.1
43gb|AC107773.9| Mus musculus chromosome 18, clone RP23-102H15, co... 40 7.1
44dbj|AP005662.3| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 7.1
45emb|AL935052.8| Zebrafish DNA sequence from clone CH211-168J10 i... 40 7.1
46gb|AC123661.22| Mus musculus chromosome 5, clone RP23-211E12, co... 40 7.1
47gb|AC090159.12| Homo sapiens chromosome 11, clone RP11-406D1, co... 40 7.1 
>emb|AL160401.12| Human DNA sequence from clone RP11-442J1 on chromosome 6 Contains the
             3' end of the BAI3 gene for brain-specific angiogenesis
             inhibitor 3, complete sequence
          Length = 121606

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 329   aaaacaagagaatatagcagcatt 352
             ||||||||||||||||||||||||
Sbjct: 33643 aaaacaagagaatatagcagcatt 33666
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>gb|AC153865.3| Mus musculus  BAC RP23-373P9 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 180703

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 316   aggagaaagagtaaaaacaagagaatatag 345
             ||||||||||||||| |||| |||||||||
Sbjct: 90484 aggagaaagagtaaatacaacagaatatag 90513
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>emb|CT025598.9| Mouse DNA sequence from clone RP23-218L3 on chromosome 13, complete
              sequence
          Length = 228266

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 230    tttctttgcttcaaatgctatt 251
              ||||||||||||||||||||||
Sbjct: 190966 tttctttgcttcaaatgctatt 190987
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>gb|AC132256.3| Mus musculus BAC clone RP24-358I7 from chromosome 8, complete sequence
          Length = 163897

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 390   atgatctttacaagacaaaagg 411
             ||||||||||||||||||||||
Sbjct: 59494 atgatctttacaagacaaaagg 59473
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>gb|AC016113.9| Homo sapiens, clone RP11-26P22, complete sequence
          Length = 185419

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 266    tgagtctcgtttcttcttctat 287
              ||||||||||||||||||||||
Sbjct: 145533 tgagtctcgtttcttcttctat 145554
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>gb|AC175538.1| Mus musculus BAC clone RP24-476A4 from chromosome 13, complete sequence
          Length = 191199

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 230   tttctttgcttcaaatgctatt 251
             ||||||||||||||||||||||
Sbjct: 70970 tttctttgcttcaaatgctatt 70991
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>gb|M16110.1|HUMAFP Homo sapiens alpha-fetoprotein gene, complete cds
          Length = 27553

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 444  agaaaaacatgtaactttacaagagg 469
            |||||||| |||||||||||||||||
Sbjct: 3417 agaaaaacttgtaactttacaagagg 3442
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>ref|XM_422127.1| PREDICTED: Gallus gallus similar to solute carrier family 35,
           member F5 (LOC424281), mRNA
          Length = 2630

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 31  cagtaataataatgatacaga 51
           |||||||||||||||||||||
Sbjct: 465 cagtaataataatgatacaga 485
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>gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete sequence
          Length = 119297

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 239   ttcaaatgctattctttcata 259
             |||||||||||||||||||||
Sbjct: 24190 ttcaaatgctattctttcata 24170
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>emb|AL499617.16| Human DNA sequence from clone RP11-312I14 on chromosome 1 Contains part
             of the RASAL2 gene for RAS protein activator like 2,
             complete sequence
          Length = 43285

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 234   tttgcttcaaatgctattctttcat 258
             |||||||||||||||||| ||||||
Sbjct: 19829 tttgcttcaaatgctattatttcat 19805
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>emb|BX936333.10| Zebrafish DNA sequence from clone CH211-90O16 in linkage group 3,
              complete sequence
          Length = 167766

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 325    agtaaaaacaagagaatatag 345
              |||||||||||||||||||||
Sbjct: 113968 agtaaaaacaagagaatatag 113988
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>gb|AC112193.2| Homo sapiens chromosome 5 clone RP11-373F8, complete sequence
          Length = 173092

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 435    gcttctatgagaaaaacatgt 455
              |||||||||||||||||||||
Sbjct: 141559 gcttctatgagaaaaacatgt 141579
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>emb|CR352514.1| Gallus gallus finished cDNA, clone ChEST824n12
          Length = 753

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 31  cagtaataataatgatacaga 51
           |||||||||||||||||||||
Sbjct: 719 cagtaataataatgatacaga 739
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>emb|BX932462.1| Gallus gallus finished cDNA, clone ChEST621n23
          Length = 1011

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 31  cagtaataataatgatacaga 51
           |||||||||||||||||||||
Sbjct: 710 cagtaataataatgatacaga 730
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>emb|BX929674.1| Gallus gallus finished cDNA, clone ChEST792g18
          Length = 856

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 31  cagtaataataatgatacaga 51
           |||||||||||||||||||||
Sbjct: 826 cagtaataataatgatacaga 846
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>gb|AC093412.3| Homo sapiens chromosome 3 clone RP11-11L6, complete sequence
          Length = 178447

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 454    gtaactttacaagaggaagag 474
              |||||||||||||||||||||
Sbjct: 158765 gtaactttacaagaggaagag 158745
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>gb|AC161465.3| Gallus gallus BAC clone CH261-97D4 from chromosome ul, complete
             sequence
          Length = 213337

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 274   gtttcttcttctattgctgaa 294
             |||||||||||||||||||||
Sbjct: 54229 gtttcttcttctattgctgaa 54249
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>dbj|AP006081.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT32P24, TM0120,
              complete sequence
          Length = 137804

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 366    ttgttctgtgaagtgatcccattga 390
              |||||||||||| ||||||||||||
Sbjct: 132465 ttgttctgtgaattgatcccattga 132441
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>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete
             sequence
          Length = 252420

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   ctattctttcatatctactt 266
             ||||||||||||||||||||
Sbjct: 44250 ctattctttcatatctactt 44231
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>gb|AC163669.2| Mus musculus BAC clone RP23-29H1 from chromosome 12, complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 354   cagtgacagaatttgttctgtgaa 377
             ||||||||| ||||||||||||||
Sbjct: 41211 cagtgacaggatttgttctgtgaa 41188
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>gb|AC164538.4| Mus musculus chromosome 5, clone RP24-324L19, complete sequence
          Length = 71724

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   attctttcatatctacttga 268
             ||||||||||||||||||||
Sbjct: 65458 attctttcatatctacttga 65477
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>gb|AC146249.2| Pan troglodytes BAC clone CH251-140O11 from Y, complete sequence
          Length = 173078

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 34    taataataatgatacagaccacta 57
             |||||||||||||| |||||||||
Sbjct: 88333 taataataatgatagagaccacta 88356
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>gb|AC132134.2| Mus musculus BAC clone RP23-267P6 from chromosome 5, complete sequence
          Length = 227078

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 382   tcccattgatgatctttacaagac 405
             ||||||||||||||||| ||||||
Sbjct: 90886 tcccattgatgatctttgcaagac 90863
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>gb|AC162307.5| Mus musculus BAC clone RP23-271I2 from chromosome 18, complete sequence
          Length = 196879

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   cagaatttgttctgtgaagt 379
             ||||||||||||||||||||
Sbjct: 39038 cagaatttgttctgtgaagt 39019
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>emb|AL442647.18| Human DNA sequence from clone RP11-72I18 on chromosome X Contains the
             5' end of a RuvB-like 2 (E. coli) (RUVBL2) pseudogene and
             part of a novel gene, complete sequence
          Length = 60994

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 235   ttgcttcaaatgctattctttcat 258
             ||||| ||||||||||||||||||
Sbjct: 33495 ttgctgcaaatgctattctttcat 33472
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>emb|AL117341.26|HSBA512N4 Human DNA sequence from clone RP11-512N4 on chromosome 10 Contains part
             of the gene for MOB protein, two novel genes and a CpG
             island, complete sequence
          Length = 181300

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 402   agacaaaagggcttgttgtgtgaa 425
             ||||||| ||||||||||||||||
Sbjct: 96139 agacaaaggggcttgttgtgtgaa 96116
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>emb|BX255918.16| Zebrafish DNA sequence from clone CH211-239I2 in linkage group 11,
              complete sequence
          Length = 189958

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 144    ttactaagtgaatgataaaaatag 167
              ||||||| ||||||||||||||||
Sbjct: 114248 ttactaattgaatgataaaaatag 114271
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>gb|AC016883.14| Homo sapiens chromosome 8, clone RP11-327N12, complete sequence
          Length = 180682

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   atgccatgctaagtggtaag 140
             ||||||||||||||||||||
Sbjct: 40535 atgccatgctaagtggtaag 40554
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>gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome 14, complete sequence
          Length = 210912

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    tttttaccccaatatatcaa 194
              ||||||||||||||||||||
Sbjct: 111040 tttttaccccaatatatcaa 111021
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>dbj|BS000619.1| Pan troglodytes chromosome Y clone:PTB-493L21, complete sequences
          Length = 161970

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 34     taataataatgatacagaccacta 57
              |||||||||||||| |||||||||
Sbjct: 134776 taataataatgatagagaccacta 134799
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>dbj|BS000603.1| Pan troglodytes chromosome Y clone:PTB-616H14, complete sequences
          Length = 133913

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 34     taataataatgatacagaccacta 57
              |||||||||||||| |||||||||
Sbjct: 109163 taataataatgatagagaccacta 109186
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 34       taataataatgatacagaccacta 57
                |||||||||||||| |||||||||
Sbjct: 22445206 taataataatgatagagaccacta 22445183
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>gb|AC018714.4| Homo sapiens BAC clone RP11-382A18 from 8, complete sequence
          Length = 176760

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    atgccatgctaagtggtaag 140
              ||||||||||||||||||||
Sbjct: 123650 atgccatgctaagtggtaag 123669
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>gb|AC022523.7| Homo sapiens chromosome 15, clone RP11-183E24, complete sequence
          Length = 154471

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   aaggagaaagagtaaaaaca 334
             ||||||||||||||||||||
Sbjct: 38630 aaggagaaagagtaaaaaca 38649
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>gb|AY624368.1| Branchiostoma belcheri tsingtaunese lysozyme C (AmphiLys1) gene,
           complete cds
          Length = 2350

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 aatgctattctttcatatct 262
           ||||||||||||||||||||
Sbjct: 884 aatgctattctttcatatct 903
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>gb|AC092078.2|AC092078 Homo sapiens chromosome 15 clone CTD-2007H18 map 15q21.1, complete
             sequence
          Length = 113915

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   ctcaaggagaaagagtaaaa 331
             ||||||||||||||||||||
Sbjct: 38027 ctcaaggagaaagagtaaaa 38046
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>gb|AC148711.1| Macaca mulatta Major Histocompatibility Complex BAC MMU404O15, complete
             sequence
          Length = 157177

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 235   ttgcttcaaatgctattctttcat 258
             ||||||||||||||||| ||||||
Sbjct: 53443 ttgcttcaaatgctattatttcat 53420
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>gb|AC148674.1| Macaca mulatta Major Histocompatibility Complex BAC MMU103F20, complete
             sequence
          Length = 174172

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 235   ttgcttcaaatgctattctttcat 258
             ||||||||||||||||| ||||||
Sbjct: 11926 ttgcttcaaatgctattatttcat 11903
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>gb|AC025167.6|AC025167 Homo sapiens chromosome 15 clone CTD-2556B7 map 15q21.1, complete
             sequence
          Length = 97990

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   ctcaaggagaaagagtaaaa 331
             ||||||||||||||||||||
Sbjct: 53666 ctcaaggagaaagagtaaaa 53685
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>gb|AC073465.5| Homo sapiens BAC clone RP11-158L8 from 2, complete sequence
          Length = 135752

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    taatgatacagaccactaga 59
             ||||||||||||||||||||
Sbjct: 94869 taatgatacagaccactaga 94888
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>emb|BX005263.10| Mouse DNA sequence from clone RP23-395K13 on chromosome X, complete
             sequence
          Length = 175998

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   attttactaagtgaatgata 160
             ||||||||||||||||||||
Sbjct: 87098 attttactaagtgaatgata 87079
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>emb|CR847530.19| Zebrafish DNA sequence from clone DKEY-14I17 in linkage group 20,
              complete sequence
          Length = 144640

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    ttatttctttgcttcaaatg 246
              ||||||||||||||||||||
Sbjct: 100057 ttatttctttgcttcaaatg 100076
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>gb|AC107773.9| Mus musculus chromosome 18, clone RP23-102H15, complete sequence
          Length = 250096

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    cagaatttgttctgtgaagt 379
              ||||||||||||||||||||
Sbjct: 191773 cagaatttgttctgtgaagt 191754
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>dbj|AP005662.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1205G3, complete
             sequence
          Length = 108147

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   atgccatgctaagtggtaag 140
             ||||||||||||||||||||
Sbjct: 38874 atgccatgctaagtggtaag 38893
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>emb|AL935052.8| Zebrafish DNA sequence from clone CH211-168J10 in linkage group 12,
              complete sequence
          Length = 133195

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 396    tttacaagacaaaagggcttgttg 419
              ||||||||||||||||| ||||||
Sbjct: 127487 tttacaagacaaaagggattgttg 127510
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>gb|AC123661.22| Mus musculus chromosome 5, clone RP23-211E12, complete sequence
          Length = 190017

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   attctttcatatctacttga 268
             ||||||||||||||||||||
Sbjct: 27229 attctttcatatctacttga 27248
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>gb|AC090159.12| Homo sapiens chromosome 11, clone RP11-406D1, complete sequence
          Length = 173557

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aacatttctgcagcaaagcc 25
             ||||||||||||||||||||
Sbjct: 63508 aacatttctgcagcaaagcc 63489


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,234,750
Number of Sequences: 3902068
Number of extensions: 6234750
Number of successful extensions: 136314
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136120
Number of HSP's gapped (non-prelim): 194
length of query: 527
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 504
effective length of database: 17,143,297,704
effective search space: 8640222042816
effective search space used: 8640222042816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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