| Clone Name | rbaal3d19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009426.1| Triticum aestivum clone wlmk1.pk0023.a8:fis, full insert mRNA sequence Length = 2298 Score = 759 bits (383), Expect = 0.0 Identities = 494/531 (93%), Gaps = 9/531 (1%) Strand = Plus / Minus Query: 162 tctgtctgtcatcatgtacaaaagagagctagaaattctgcaacgaggggctgtccggag 221 |||||| |||||||||||||||||||||||| |||||||| ||||||| |||| | |||| Sbjct: 2116 tctgtcggtcatcatgtacaaaagagagctaaaaattctgaaacgaggcgctgcctggag 2057 Query: 222 cct------caggagacggttttgttttcttcannnnnnncctgttacctcgggccggac 275 | | ||||||||| ||||||||| ||| |||||||||||||||||||| Sbjct: 2056 cttgtcgatcaggagacgattttgttttgttc--ttttttcctgttacctcgggccggac 1999 Query: 276 agctccaccgcccggaggttgaaagtggagtcgacgatccagtcgttgtgtcgcggagcc 335 ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||| Sbjct: 1998 agctccaccgcccggaggttgtaggtggagtcgacgatccagtcgttgtttcgcggggcc 1939 Query: 336 agctccgcctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagc 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1938 agctccgcctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagc 1879 Query: 396 ccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccc 455 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1878 ccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggcgacccc 1819 Query: 456 tgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgctccacgtacacgctc 515 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1818 tgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgctccacgtacacgatg 1759 Query: 516 tgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacccag 575 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1758 tgcaggtccgggtcctccagcatctccacattcttctctttcagcagccctttcacccag 1699 Query: 576 tcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctctgtcca 635 ||||||||||||||||||||||| || ||||||||||| |||||||| |||||||||||| Sbjct: 1698 tcaagcagcatgacatcgtcgtcgtttgcaagacgtgcaaggtcaaatgccctctgtcca 1639 Query: 636 gtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctc 686 |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1638 gtgataagctccagaagcatgatg-ccgtaaccgaaaacatccgtcttctc 1589
>emb|AJ277702.1|ZMA277702 Zea mays mRNA for SERK1 protein Length = 2068 Score = 472 bits (238), Expect = e-130 Identities = 380/426 (89%), Gaps = 1/426 (0%) Strand = Plus / Minus Query: 261 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 320 ||||||||||||||||| || || |||| ||||||| | ||||||||||||||||||||| Sbjct: 1877 tacctcgggccggacagttcgacggccctgaggttgtaggtggagtcgacgatccagtcg 1818 Query: 321 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 380 ||||| ||||| || ||||||||||||||||| | |||||||||||||||||||| |||| Sbjct: 1817 ttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactgctcc 1758 Query: 381 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 440 || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1757 caccgctccgccagcccgtcgccctccagcatccgcgccacctccgacatcttgggccgc 1698 Query: 441 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgc 500 |||||||| || |||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 1697 tccatcggggagccctgcgtgcacagcagcgccacctggatcagcgactccacctcctgg 1638 Query: 501 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 560 ||||||||| || |||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct: 1637 tccacgtaccggccctgcaggtccgggtccaccagctgctccagcttcttctccttcagc 1578 Query: 561 agccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtca 620 ||| | |||||||||||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct: 1577 agcgccttcacccagtcaaggagcatgacgtcgtcatcgttcgcgagacgagcgaggtcg 1518 Query: 621 aacgccctctgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgt 680 ||||||||||| || ||||| || ||||| |||||||| |||||| ||||| || ||||| Sbjct: 1517 aacgccctctgcccggtgatgagttccaggagcatgat-cccgtagccgaagacgtccgt 1459 Query: 681 cttctc 686 |||||| Sbjct: 1458 cttctc 1453
>ref|XM_472733.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1887 Score = 452 bits (228), Expect = e-124 Identities = 379/428 (88%), Gaps = 1/428 (0%) Strand = Plus / Minus Query: 260 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 319 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 1887 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 1828 Query: 320 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 379 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1827 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 1768 Query: 380 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 439 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1767 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1708 Query: 440 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 499 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 1707 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 1648 Query: 500 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 559 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1647 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 1588 Query: 560 cagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtc 619 |||||||||||||| || |||| ||| ||||| || || || |||||||| || || || Sbjct: 1587 gagccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatc 1528 Query: 620 aaacgccctctgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccg 679 ||| ||||| ||||| || || ||||| ||||||||||| || || || |||||||| | Sbjct: 1527 aaatgccctttgtcctgtaatgagctcaagaagcatgat-tccatagccaaaaacatcag 1469 Query: 680 tcttctca 687 |||||||| Sbjct: 1468 tcttctca 1461
>dbj|AK099777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095F19, full insert sequence Length = 2296 Score = 452 bits (228), Expect = e-124 Identities = 379/428 (88%), Gaps = 1/428 (0%) Strand = Plus / Minus Query: 260 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 319 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 2089 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 2030 Query: 320 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 379 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2029 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 1970 Query: 380 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 439 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1969 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1910 Query: 440 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 499 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 1909 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 1850 Query: 500 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 559 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1849 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 1790 Query: 560 cagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtc 619 |||||||||||||| || |||| ||| ||||| || || || |||||||| || || || Sbjct: 1789 gagccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatc 1730 Query: 620 aaacgccctctgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccg 679 ||| ||||| ||||| || || ||||| ||||||||||| || || || |||||||| | Sbjct: 1729 aaatgccctttgtcctgtaatgagctcaagaagcatgat-tccatagccaaaaacatcag 1671 Query: 680 tcttctca 687 |||||||| Sbjct: 1670 tcttctca 1663
>dbj|AK105892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E09, full insert sequence Length = 1161 Score = 452 bits (228), Expect = e-124 Identities = 379/428 (88%), Gaps = 1/428 (0%) Strand = Plus / Minus Query: 260 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 319 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 832 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 773 Query: 320 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 379 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 713 Query: 380 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 439 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 653 Query: 440 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 499 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 652 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 593 Query: 500 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 559 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 533 Query: 560 cagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtc 619 |||||||||||||| || |||| ||| ||||| || || || |||||||| || || || Sbjct: 532 gagccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatc 473 Query: 620 aaacgccctctgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccg 679 ||| ||||| ||||| || || ||||| ||||||||||| || || || |||||||| | Sbjct: 472 aaatgccctttgtcctgtaatgagctcaagaagcatgat-tccatagccaaaaacatcag 414 Query: 680 tcttctca 687 |||||||| Sbjct: 413 tcttctca 406
>dbj|AK061767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B11, full insert sequence Length = 1161 Score = 452 bits (228), Expect = e-124 Identities = 379/428 (88%), Gaps = 1/428 (0%) Strand = Plus / Minus Query: 260 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 319 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 832 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 773 Query: 320 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 379 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 713 Query: 380 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 439 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 653 Query: 440 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 499 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 652 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 593 Query: 500 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 559 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 533 Query: 560 cagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtc 619 |||||||||||||| || |||| ||| ||||| || || || |||||||| || || || Sbjct: 532 gagccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatc 473 Query: 620 aaacgccctctgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccg 679 ||| ||||| ||||| || || ||||| ||||||||||| || || || |||||||| | Sbjct: 472 aaatgccctttgtcctgtaatgagctcaagaagcatgat-tccatagccaaaaacatcag 414 Query: 680 tcttctca 687 |||||||| Sbjct: 413 tcttctca 406
>gb|AY652735.1| Oryza sativa (japonica cultivar-group) somatic embryogenesis protein kinase 1 mRNA, complete cds Length = 2380 Score = 444 bits (224), Expect = e-121 Identities = 378/428 (88%), Gaps = 1/428 (0%) Strand = Plus / Minus Query: 260 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 319 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 2007 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 1948 Query: 320 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 379 |||||| || || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1947 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttttgccactcctc 1888 Query: 380 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 439 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1887 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1828 Query: 440 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 499 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 1827 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 1768 Query: 500 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 559 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1767 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 1708 Query: 560 cagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtc 619 |||||||||||||| || |||| ||| ||||| || || || |||||||| || || || Sbjct: 1707 gagccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatc 1648 Query: 620 aaacgccctctgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccg 679 ||| ||||| ||||| || || ||||| ||||||||||| || || || |||||||| | Sbjct: 1647 aaatgccctttgtcctgtaatgagctcaagaagcatgat-tccatagccaaaaacatcag 1589 Query: 680 tcttctca 687 |||||||| Sbjct: 1588 tcttctca 1581
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 414 bits (209), Expect = e-112 Identities = 287/313 (91%) Strand = Plus / Plus Query: 260 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 319 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 51112 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 51171 Query: 320 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 379 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51172 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 51231 Query: 380 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 439 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51232 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 51291 Query: 440 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 499 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 51292 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 51351 Query: 500 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 559 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51352 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 51411 Query: 560 cagccctttcacc 572 |||||||||||| Sbjct: 51412 gagccctttcacc 51424 Score = 44.1 bits (22), Expect = 0.60 Identities = 95/118 (80%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 ||||| || |||| ||| ||||| || || || |||||||| || || ||||| ||||| Sbjct: 51781 acccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatcaaatgccctt 51840 Query: 630 tgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctca 687 ||||| || || ||||| ||||||||||| || || || |||||||| ||||||||| Sbjct: 51841 tgtcctgtaatgagctcaagaagcatgat-tccatagccaaaaacatcagtcttctca 51897
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 414 bits (209), Expect = e-112 Identities = 287/313 (91%) Strand = Plus / Plus Query: 260 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 319 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 22842337 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 22842396 Query: 320 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 379 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22842397 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 22842456 Query: 380 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 439 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 22842457 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 22842516 Query: 440 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 499 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 22842517 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 22842576 Query: 500 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 559 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 22842577 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 22842636 Query: 560 cagccctttcacc 572 |||||||||||| Sbjct: 22842637 gagccctttcacc 22842649 Score = 44.1 bits (22), Expect = 0.60 Identities = 95/118 (80%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 ||||| || |||| ||| ||||| || || || |||||||| || || ||||| ||||| Sbjct: 22843006 acccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatcaaatgccctt 22843065 Query: 630 tgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctca 687 ||||| || || ||||| ||||||||||| || || || |||||||| ||||||||| Sbjct: 22843066 tgtcctgtaatgagctcaagaagcatgat-tccatagccaaaaacatcagtcttctca 22843122
>emb|AJ400868.1|ZMA400868 Zea mays serk1 gene for somatic embryogenesis receptor-like kinase 1, exons 1-11 Length = 5715 Score = 381 bits (192), Expect = e-102 Identities = 282/312 (90%) Strand = Plus / Minus Query: 261 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 320 ||||||||||||||||| || || |||| ||||||| | ||||||||||||||||||||| Sbjct: 4993 tacctcgggccggacagttcgacggccctgaggttgtaggtggagtcgacgatccagtcg 4934 Query: 321 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 380 ||||| ||||| || ||||||||||||||||| | |||||||||||||||||||| |||| Sbjct: 4933 ttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactgctcc 4874 Query: 381 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 440 || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 4873 caccgctccgccagcccgtcgccctccagcatccgcgccacctccgacatcttgggccgc 4814 Query: 441 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgc 500 |||||||| || |||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 4813 tccatcggggagccctgcgtgcacagcagcgccacctggatcagcgactccacctcctgg 4754 Query: 501 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 560 ||||||||| || |||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct: 4753 tccacgtaccggccctgcaggtccgggtccaccagctgctccagcttcttctccttcagc 4694 Query: 561 agccctttcacc 572 ||| | |||||| Sbjct: 4693 agcgccttcacc 4682 Score = 97.6 bits (49), Expect = 5e-17 Identities = 101/117 (86%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 ||||||||||| |||||||| ||||| || ||||| ||||| |||||||| ||||||||| Sbjct: 4538 acccagtcaaggagcatgacgtcgtcatcgttcgcgagacgagcgaggtcgaacgccctc 4479 Query: 630 tgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctc 686 || || ||||| || ||||| |||||||| |||||| ||||| || ||||||||||| Sbjct: 4478 tgcccggtgatgagttccaggagcatgat-cccgtagccgaagacgtccgtcttctc 4423
>emb|AJ277703.1|ZMA277703 Zea mays mRNA for SERK2 protein Length = 2077 Score = 307 bits (155), Expect = 3e-80 Identities = 360/427 (84%), Gaps = 1/427 (0%) Strand = Plus / Minus Query: 261 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 320 ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| Sbjct: 1886 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 1827 Query: 321 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 380 ||| | |||| ||| ||| |||||||||| |||||||| || |||||||| || ||| Sbjct: 1826 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 1767 Query: 381 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 440 || ||||| ||||||||||| || || |||||||||||||||||||||||||| || ||| Sbjct: 1766 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 1707 Query: 441 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgc 500 |||| || || ||||||||||| || || |||||||| || || |||||||||| | Sbjct: 1706 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 1647 Query: 501 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 560 ||| |||| | ||||||| || ||||||||||||||||||||||||||||| |||| | Sbjct: 1646 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 1587 Query: 561 agccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtca 620 || ||||||||||||||||| ||||| |||||||| ||||| |||||||| || || ||| Sbjct: 1586 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 1527 Query: 621 aacgccctctgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgt 680 || |||||||| ||||| |||||||||||||||||||| ||| || || |||||||| || Sbjct: 1526 aatgccctctggccagtaataagctccagaagcatgat-cccatagccaaaaacatcagt 1468 Query: 681 cttctca 687 ||||||| Sbjct: 1467 cttctca 1461
>gb|BT009223.1| Triticum aestivum clone wle1n.pk0076.d4:fis, full insert mRNA sequence Length = 1651 Score = 280 bits (141), Expect = 6e-72 Identities = 352/421 (83%), Gaps = 1/421 (0%) Strand = Plus / Minus Query: 267 gggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcgttgtgt 326 ||||| ||||| ||||| || |||||||| | |||||||| || |||||||||||| | Sbjct: 1368 gggccagacagttccacggcgcggaggttatatgtggagtcaacaatccagtcgttgcga 1309 Query: 327 cgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcccagcgc 386 | ||||||| ||| |||||||||| ||||||||||||||||||||| |||||||| | | Sbjct: 1308 agaggagccaactctgcctcctgcctgaccacctccaccttctgccattcctcccatctc 1249 Query: 387 tccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccatc 446 || |||| ||||| || |||||||||||||| ||||||||||||||||| || |||| Sbjct: 1248 tctgccaagccgtcaccttccagcatcctcacgacctccgacatcttggggcgctccact 1189 Query: 447 ggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgctccacg 506 || || |||||||||||||||||||| ||||||||||| | ||||||||| ||| | Sbjct: 1188 ggcgagccctgcgtgcacagcagcgctacctggatcagagattccacctcggtctcttca 1129 Query: 507 tacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccct 566 || |||||||| ||| ||||||||||||||||| || || ||||| |||| || ||| Sbjct: 1128 tagttgctctgcaagtctgggtccaccagcatctcaacttttttctccttcaacaatcct 1069 Query: 567 ttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgcc 626 |||||||||||||| ||||| |||||||| ||||| ||||| || || || ||||| ||| Sbjct: 1068 ttcacccagtcaagaagcataacatcgtcatcatttgcaaggcgagcaagatcaaatgcc 1009 Query: 627 ctctgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctc 686 ||||| ||||| |||||||||||||| |||| ||||| ||||||||||| |||||||| Sbjct: 1008 ctctgcccagtaataagctccagaagtgtgat-tccgtagccgaaaacatcagtcttctc 950 Query: 687 a 687 | Sbjct: 949 a 949
>emb|AJ400869.1|ZMA400869 Zea mays serk2 gene for somatic embryogenesis receptor-like kinase 2, exons 1-11 Length = 5484 Score = 206 bits (104), Expect = 7e-50 Identities = 260/312 (83%) Strand = Plus / Minus Query: 261 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 320 ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| Sbjct: 5019 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 4960 Query: 321 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 380 ||| | |||| ||| ||| |||||||||| |||||||| || |||||||| || ||| Sbjct: 4959 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 4900 Query: 381 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 440 || ||||| ||||||||||| || || |||||||||||||||||||||||||| || ||| Sbjct: 4899 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 4840 Query: 441 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgc 500 |||| || || ||||||||||| || || |||||||| || || |||||||||| | Sbjct: 4839 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 4780 Query: 501 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 560 ||| |||| | ||||||| || ||||||||||||||||||||||||||||| |||| | Sbjct: 4779 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 4720 Query: 561 agccctttcacc 572 || ||||||||| Sbjct: 4719 agtcctttcacc 4708 Score = 107 bits (54), Expect = 5e-20 Identities = 103/118 (87%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 ||||||||||| ||||| |||||||| ||||| |||||||| || || ||||| |||||| Sbjct: 4317 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 4258 Query: 630 tgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctca 687 || ||||| |||||||||||||||||||| ||| || || |||||||| ||||||||| Sbjct: 4257 tggccagtaataagctccagaagcatgat-cccatagccaaaaacatcagtcttctca 4201
>emb|AJ400870.1|ZMA400870 Zea mays partial mRNA for somatic embryogenesis receptor-like kinase 3, (serk3 gene) Length = 1622 Score = 165 bits (83), Expect = 2e-37 Identities = 195/231 (84%), Gaps = 1/231 (0%) Strand = Plus / Minus Query: 453 ccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgctccacgtacacg 512 ||||||||||| || || ||||||||||| || |||||||||| |||| |||| | Sbjct: 1616 ccctgcgtgcagaggagtgccacctggataaggttctccacctcgatctcctcgtaggca 1557 Query: 513 ctctgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacc 572 |||| || || |||||||||| |||||||||||| ||||| |||||||| ||||||||| Sbjct: 1556 ttctgtagatctgggtccaccaacatctccacctttttctccttcagcagtcctttcacc 1497 Query: 573 cagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctctgt 632 |||||||| ||||| ||||| || ||||| |||||||| || || ||||| ||||||||| Sbjct: 1496 cagtcaagaagcataacatcatcatcatttgcaagacgagctagatcaaatgccctctgt 1437 Query: 633 ccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtctt 683 ||||| |||||||||||||||||||| ||| || || |||||||| ||||| Sbjct: 1436 ccagtaataagctccagaagcatgat-cccatatccaaaaacatcggtctt 1387
>gb|AY110115.1| Zea mays CL444_1 mRNA sequence Length = 2474 Score = 163 bits (82), Expect = 9e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 261 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 320 ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| Sbjct: 2114 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 2055 Query: 321 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 380 ||| | |||| ||| ||| |||||||||| |||||||| || |||||||| || ||| Sbjct: 2054 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 1995 Query: 381 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 440 || ||||| ||||||||||| || || |||||||||||||||||||||||||| || ||| Sbjct: 1994 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 1935 Query: 441 tccatcggtgacccctgcgtgcacagcagcgccacctg 478 |||| ||| || ||||||||||| || || |||||||| Sbjct: 1934 tccaacggggagccctgcgtgcagaggagtgccacctg 1897 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 564 cctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaac 623 ||||||||||||||||| ||||| |||||||| ||||| |||||||| || || ||||| Sbjct: 1811 cctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaat 1752 Query: 624 gccctctgtccagtgataagctccagaagcatgat 658 |||||||| ||||| |||||||||||||||||||| Sbjct: 1751 gccctctggccagtaataagctccagaagcatgat 1717
>dbj|AB115767.1| Citrus unshiu SERK mRNA for somatic embryogenesis receptor kinase 1, complete cds Length = 1866 Score = 119 bits (60), Expect = 1e-23 Identities = 237/296 (80%) Strand = Plus / Minus Query: 360 tccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcacc 419 |||||||| |||||||| ||||| ||||| |||| || || || || ||||| || || Sbjct: 1763 tccaccttttgccactcatcccaccgctctgccaagccatcaccttcaagcattctaaca 1704 Query: 420 acctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgccacctgg 479 || ||||||||||||||||||||||| || || || || ||||| |||| ||| |||||| Sbjct: 1703 acttccgacatcttgggccggtccataggggagccttgagtgcagagcaacgcaacctgg 1644 Query: 480 atcagcgcctccacctcgtgctccacgtacacgctctgcaggtccgggtccaccagcatc 539 || || ||||||||| ||||| || | |||| || || ||||| || ||||| Sbjct: 1643 ataagttgctccacctcagcttccacataattgttctggagatcagggtcaactagcatt 1584 Query: 540 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 599 || | |||||| || ||||| || ||||||||||| ||||||||||||||||| || ||| Sbjct: 1583 tctaacttcttttccttcagaagtcctttcacccaatcaagcagcatgacatcatcatca 1524 Query: 600 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcat 655 || || ||||| || || ||||| || |||||||||||||| ||||| |||||||| Sbjct: 1523 tttgccagacgagcaagatcaaaggctctctgtccagtgattagctctagaagcat 1468
>gb|AY791293.2| Cocos nucifera somatic embryogenesis receptor kinase mRNA, complete cds Length = 1890 Score = 111 bits (56), Expect = 3e-21 Identities = 236/296 (79%) Strand = Plus / Minus Query: 363 accttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcaccacc 422 ||||||||||| |||||||| | ||| || || || || || || ||||||||||||||| Sbjct: 1781 accttctgccattcctcccatctctcagcaaggccatcaccttcgagcatcctcaccacc 1722 Query: 423 tccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgccacctggatc 482 || |||||||||||||| ||||| || || ||||| || || |||| | || ||||| Sbjct: 1721 tctgacatcttgggccgctccattggggagccctgggtacatagcaaagttacttggata 1662 Query: 483 agcgcctccacctcgtgctccacgtacacgctctgcaggtccgggtccaccagcatctcc 542 |||| ||||||||| |||||| || | ||| || |||||||| |||| ||| ||| Sbjct: 1661 agcgactccacctcagcctccacatagtcatcctggagatccgggtcgaccaacatgtcc 1602 Query: 543 accttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtcattc 602 | ||| |||||||||||||| ||||| ||||| || |||| ||||||||| || ||||| Sbjct: 1601 agctttttctctttcagcagtccttttacccaatccagcaacatgacatcatcatcattt 1542 Query: 603 gcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgat 658 ||||| | || ||||| || |||||||| || || ||||| |||| ||||||||| Sbjct: 1541 gcaagcctggcaaggtcgaatgccctctggcctgtaataagttccaaaagcatgat 1486
>gb|AY162176.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1) mRNA, complete cds Length = 2392 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Minus Query: 549 ttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaaga 608 ||||||||||| || ||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 1822 ttctctttcagaagtccttttacccaatcaagcagcataacatcatcatcattcgcaagt 1763 Query: 609 cgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgat 658 || || |||||||| || || |||||||| |||||||| ||||||||||| Sbjct: 1762 cgagcaaggtcaaaagctctttgtccagttataagctcaagaagcatgat 1713 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 399 tcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccctgc 458 ||||| || ||||| ||||| || || |||||||| ||||||||||| || || || ||| Sbjct: 1972 tcgccttcaagcattctcactacatctgacatctttggccggtccataggcgaaccttgc 1913 Query: 459 gtgcacagcagcgccacctggat 481 ||||| |||||||| |||||||| Sbjct: 1912 gtgcatagcagcgcaacctggat 1890
>ref|XM_469440.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2503 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 2227 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 2168 Query: 416 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 472 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 2167 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 2111
>ref|XM_469439.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2387 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 2037 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 1978 Query: 416 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 472 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 1977 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 1921
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 95570 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 95629 Query: 416 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 472 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 95630 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 95686
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 27959842 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 27959901 Query: 416 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 472 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 27959902 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 27959958
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 65184 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 65125 Query: 416 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 472 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 65124 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 65068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 28051166 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 28051225 Query: 416 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 472 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 28051226 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 28051282
>dbj|AK111846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O14, full insert sequence Length = 2507 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 2231 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 2172 Query: 416 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 472 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 2171 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 2115
>ref|NM_119497.3| Arabidopsis thaliana BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase AT4G33430 (BAK1) mRNA, complete cds Length = 2579 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 546 ttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtcattcgca 605 ||||||||||| | || ||||||||||||||| || | ||||||||| || |||||||| Sbjct: 2033 ttcttctcttttaacaaccctttcacccagtctagtaacatgacatcatcatcattcgcg 1974 Query: 606 agacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatga 657 || || || || ||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 1973 aggcgagcaagatcaaaagccctttgtccagtgataagctcaagaagcatga 1922
>gb|AF384970.1| Arabidopsis thaliana somatic embryogenesis receptor-like kinase 3 (SERK3) mRNA, complete cds Length = 2507 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 546 ttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtcattcgca 605 ||||||||||| | || ||||||||||||||| || | ||||||||| || |||||||| Sbjct: 2032 ttcttctcttttaacaaccctttcacccagtctagtaacatgacatcatcatcattcgcg 1973 Query: 606 agacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatga 657 || || || || ||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 1972 aggcgagcaagatcaaaagccctttgtccagtgataagctcaagaagcatga 1921
>ref|NM_103144.3| Arabidopsis thaliana SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2); kinase AT1G34210 (SERK2) mRNA, complete cds Length = 3461 Score = 85.7 bits (43), Expect = 2e-13 Identities = 140/171 (81%), Gaps = 1/171 (0%) Strand = Plus / Minus Query: 516 tgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacccag 575 |||||||| || ||||| |||||||||| ||||||||| |||| |||||||||||||| Sbjct: 2036 tgcaggtcaggatccacaagcatctccagcttcttctccttcaaaagccctttcacccaa 1977 Query: 576 tcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctctgtcca 635 || || ||||| || || ||||||||||| || | ||| || ||||| || ||||| || Sbjct: 1976 tctaggagcataacgtcatcgtcattcgccagtcttgcaagatcaaaagctctctgacct 1917 Query: 636 gtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctc 686 || || || |||| ||||||||| |||||| || |||||||| || ||||| Sbjct: 1916 gtaatcagttccaaaagcatgat-cccgtagccaaaaacatcagttttctc 1867
>ref|XM_464966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2415 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 1961 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 1902 Query: 416 caccacctccgacat 430 |||||||| ||||| Sbjct: 1901 aaccacctctgacat 1887
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 10639696 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 10639637 Query: 416 caccacctccgacat 430 |||||||| ||||| Sbjct: 10639636 aaccacctctgacat 10639622 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 378 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 437 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 30335181 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 30335240 Query: 438 c 438 | Sbjct: 30335241 c 30335241 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 473 cacctggatcagcgcctccacctcgtgct 501 |||| |||||||||||||||||||||||| Sbjct: 220561 cacccggatcagcgcctccacctcgtgct 220589 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 ccgcctcctgccggaccacct 360 ||||||||||||||||||||| Sbjct: 24942555 ccgcctcctgccggaccacct 24942575
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 57386 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 57327 Query: 416 caccacctccgacat 430 |||||||| ||||| Sbjct: 57326 aaccacctctgacat 57312
>dbj|AK102120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084N08, full insert sequence Length = 2415 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 1961 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 1902 Query: 416 caccacctccgacat 430 |||||||| ||||| Sbjct: 1901 aaccacctctgacat 1887
>gb|AY104736.1| Zea mays PCO086463 mRNA sequence Length = 1810 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||| ||||| ||||| || |||||||||||||||||||| | ||| || || || |||| Sbjct: 1316 cctcttgccgtaccacttctaccttctgccactcctcccacctctcggcgagaccatcgc 1257 Query: 403 cctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccctgcgtgc 462 | || ||||||||||| |||||||||||||| || || ||||| || | ||| |||| Sbjct: 1256 cttcaagcatcctcacaacctccgacatcttaggacgttccatggggttgctctgagtgc 1197 Query: 463 acagcagcgccacctggatcagcgcctccacctcg 497 | || ||||||||||||||||| | ||||||||| Sbjct: 1196 agaggagcgccacctggatcagagattccacctcg 1162 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 546 ttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtcattcgca 605 |||||||| || |||| ||| || ||||||||||| ||||||||||| || ||||| ||| Sbjct: 1113 ttcttctccttgagcaaccccttgacccagtcaagaagcatgacatcatcatcattagca 1054 Query: 606 agacg 610 ||||| Sbjct: 1053 agacg 1049
>gb|AY162177.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1) gene, complete cds Length = 4206 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 ||||| ||||||||||| ||||| || ||||||||||| || || |||||||| || || Sbjct: 3717 acccaatcaagcagcataacatcatcatcattcgcaagtcgagcaaggtcaaaagctctt 3658 Query: 630 tgtccagtgataagctccagaagcatgat 658 |||||||| |||||||| ||||||||||| Sbjct: 3657 tgtccagttataagctcaagaagcatgat 3629 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 399 tcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccctgc 458 ||||| || ||||| ||||| || || |||||||| ||||||||||| || || || ||| Sbjct: 4002 tcgccttcaagcattctcactacatctgacatctttggccggtccataggcgaaccttgc 3943 Query: 459 gtgcacagcagcgccacctggat 481 ||||| |||||||| |||||||| Sbjct: 3942 gtgcatagcagcgcaacctggat 3920
>dbj|AK066118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055F13, full insert sequence Length = 2968 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcc 414 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 2476 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatcc 2418
>gb|AY106186.1| Zea mays PCO110698 mRNA sequence Length = 611 Score = 73.8 bits (37), Expect = 7e-10 Identities = 115/141 (81%) Strand = Plus / Minus Query: 356 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 415 ||||||||||| ||||||||||||||| | ||| || || || |||||||||||||||| Sbjct: 355 cacctccacctgctgccactcctcccacctctcggcgaggccctcgccctccagcatccg 296 Query: 416 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgccac 475 |||||||| ||||| || |||||| || ||| |||||||||| |||||||| | Sbjct: 295 gaccacctcggacatggacgggcggtcctcgggcgacgcctgcgtgcagagcagcgcgat 236 Query: 476 ctggatcagcgcctccacctc 496 |||||||| | ||||||||| Sbjct: 235 ctggatcatcatctccacctc 215
>ref|NM_126955.3| Arabidopsis thaliana ATSERK4; protein binding / protein kinase/ transmembrane receptor protein serine/threonine kinase AT2G13790 (ATSERK4) mRNA, complete cds Length = 2219 Score = 71.9 bits (36), Expect = 3e-09 Identities = 121/148 (81%), Gaps = 1/148 (0%) Strand = Plus / Minus Query: 540 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 599 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1715 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1656 Query: 600 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 659 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1655 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatga-c 1597 Query: 660 cccgtaaccgaaaacatccgtcttctca 687 |||||| || |||||||| ||||||||| Sbjct: 1596 cccgtacccaaaaacatcagtcttctca 1569
>ref|NM_126956.3| Arabidopsis thaliana ATSERK5; ATP binding / protein kinase/ transmembrane receptor protein serine/threonine kinase AT2G13800 (ATSERK5) mRNA, complete cds Length = 1985 Score = 71.9 bits (36), Expect = 3e-09 Identities = 121/148 (81%), Gaps = 1/148 (0%) Strand = Plus / Minus Query: 540 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 599 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1519 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1460 Query: 600 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 659 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1459 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatga-c 1401 Query: 660 cccgtaaccgaaaacatccgtcttctca 687 |||||| || |||||||| ||||||||| Sbjct: 1400 cccgtacccaaaaacatcagtcttctca 1373
>gb|AY056243.1| Arabidopsis thaliana unknown protein (At2g13780) mRNA, complete cds Length = 2070 Score = 71.9 bits (36), Expect = 3e-09 Identities = 121/148 (81%), Gaps = 1/148 (0%) Strand = Plus / Minus Query: 540 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 599 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1598 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1539 Query: 600 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 659 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1538 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatga-c 1480 Query: 660 cccgtaaccgaaaacatccgtcttctca 687 |||||| || |||||||| ||||||||| Sbjct: 1479 cccgtacccaaaaacatcagtcttctca 1452
>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79 Length = 199536 Score = 71.9 bits (36), Expect = 3e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 |||||||| || | ||||||||| || |||||||| || || || || ||||| ||||| Sbjct: 115146 acccagtctagtaacatgacatcatcatcattcgcgaggcgagcaagatcaaaagccctt 115205 Query: 630 tgtccagtgataagctccagaagcatga 657 ||||||||||||||||| |||||||||| Sbjct: 115206 tgtccagtgataagctcaagaagcatga 115233
>emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17M5 (ESSA project) Length = 96475 Score = 71.9 bits (36), Expect = 3e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 |||||||| || | ||||||||| || |||||||| || || || || ||||| ||||| Sbjct: 50367 acccagtctagtaacatgacatcatcatcattcgcgaggcgagcaagatcaaaagccctt 50426 Query: 630 tgtccagtgataagctccagaagcatga 657 ||||||||||||||||| |||||||||| Sbjct: 50427 tgtccagtgataagctcaagaagcatga 50454
>gb|AY094412.1| Arabidopsis thaliana At2g13800/F13J11.15 mRNA, complete cds Length = 1965 Score = 71.9 bits (36), Expect = 3e-09 Identities = 121/148 (81%), Gaps = 1/148 (0%) Strand = Plus / Minus Query: 540 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 599 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1503 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1444 Query: 600 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 659 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1443 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatga-c 1385 Query: 660 cccgtaaccgaaaacatccgtcttctca 687 |||||| || |||||||| ||||||||| Sbjct: 1384 cccgtacccaaaaacatcagtcttctca 1357
>emb|BX820947.1|CNS0A8M0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH84ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1916 Score = 71.9 bits (36), Expect = 3e-09 Identities = 121/148 (81%), Gaps = 1/148 (0%) Strand = Plus / Minus Query: 540 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 599 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1521 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1462 Query: 600 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 659 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1461 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatga-c 1403 Query: 660 cccgtaaccgaaaacatccgtcttctca 687 |||||| || |||||||| ||||||||| Sbjct: 1402 cccgtacccaaaaacatcagtcttctca 1375
>gb|BT001116.1| Arabidopsis thaliana At2g13800/F13J11.15 mRNA, complete cds Length = 1455 Score = 71.9 bits (36), Expect = 3e-09 Identities = 121/148 (81%), Gaps = 1/148 (0%) Strand = Plus / Minus Query: 540 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 599 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1163 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1104 Query: 600 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 659 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1103 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatga-c 1045 Query: 660 cccgtaaccgaaaacatccgtcttctca 687 |||||| || |||||||| ||||||||| Sbjct: 1044 cccgtacccaaaaacatcagtcttctca 1017
>gb|AY108393.1| Zea mays PCO126676 mRNA sequence Length = 564 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 360 tccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcacc 419 ||||| |||||| || ||||||| | ||| || |||||||| |||||||||||||| | | Sbjct: 277 tccacgttctgcgacgcctcccatctctcggcgagcccgtccccctccagcatcctgatc 218 Query: 420 acctccgacatcttgggccggt 441 ||||| |||||| ||||||||| Sbjct: 217 acctcggacatcctgggccggt 196
>gb|AF384969.1| Arabidopsis thaliana somatic embryogenesis receptor-like kinase 2 (SERK2) mRNA, complete cds Length = 1887 Score = 63.9 bits (32), Expect = 6e-07 Identities = 138/172 (80%), Gaps = 1/172 (0%) Strand = Plus / Minus Query: 515 ctgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcaccca 574 |||||| || || ||||| |||||||||| |||||||| |||| || ||||||||||| Sbjct: 1629 ctgcagatcaggatccacaagcatctccagtttcttctccttcaaaagtcctttcaccca 1570 Query: 575 gtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctctgtcc 634 || || ||||| || || ||||||||||| || | ||| || ||||| || || || || Sbjct: 1569 atctaggagcataacgtcatcgtcattcgccagtcttgcaagatcaaaagctctttgacc 1510 Query: 635 agtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctc 686 || || || |||| ||||||||| |||||| ||||||||||| || ||||| Sbjct: 1509 tgtaatcagttccaaaagcatgat-cccgtagccgaaaacatcggttttctc 1459
>ref|NM_105841.3| Arabidopsis thaliana SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase AT1G71830 (SERK1) mRNA, complete cds Length = 2565 Score = 61.9 bits (31), Expect = 3e-06 Identities = 100/123 (81%) Strand = Plus / Minus Query: 536 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 595 |||||| | ||||||||| |||| || ||||||||||||||||| | |||||| ||||| Sbjct: 2016 catctctagcttcttctccttcaacaatcctttcacccagtcaagtaacatgacgtcgtc 1957 Query: 596 gtcattcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcat 655 ||| || || || || ||||| || || || || ||||| ||||| || || |||||||| Sbjct: 1956 gtcgttagctagccgagcgagatcgaaagctctttgtcctgtgattagttctagaagcat 1897 Query: 656 gat 658 ||| Sbjct: 1896 gat 1894 Score = 44.1 bits (22), Expect = 0.60 Identities = 73/90 (81%) Strand = Plus / Minus Query: 386 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 445 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 2166 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 2107 Query: 446 cggtgacccctgcgtgcacagcagcgccac 475 ||||| || |||||||| |||| |||||| Sbjct: 2106 tggtgatccttgcgtgcatagcaacgccac 2077
>ref|XM_480326.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4009 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 3813 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 3754 Query: 403 cctccagcatcctcaccacctccgacatctt 433 | || ||||||||||||||||||| |||||| Sbjct: 3753 cttcaagcatcctcaccacctccgccatctt 3723
>gb|AY048200.1| Arabidopsis thaliana At1g71830/F14O23_24 mRNA, complete cds Length = 2462 Score = 61.9 bits (31), Expect = 3e-06 Identities = 100/123 (81%) Strand = Plus / Minus Query: 536 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 595 |||||| | ||||||||| |||| || ||||||||||||||||| | |||||| ||||| Sbjct: 2016 catctctagcttcttctccttcaacaatcctttcacccagtcaagtaacatgacgtcgtc 1957 Query: 596 gtcattcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcat 655 ||| || || || || ||||| || || || || ||||| ||||| || || |||||||| Sbjct: 1956 gtcgttagctagccgagcgagatcgaaagctctttgtcctgtgattagttctagaagcat 1897 Query: 656 gat 658 ||| Sbjct: 1896 gat 1894 Score = 44.1 bits (22), Expect = 0.60 Identities = 73/90 (81%) Strand = Plus / Minus Query: 386 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 445 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 2166 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 2107 Query: 446 cggtgacccctgcgtgcacagcagcgccac 475 ||||| || |||||||| |||| |||||| Sbjct: 2106 tggtgatccttgcgtgcatagcaacgccac 2077
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 4354825 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 4354766 Query: 403 cctccagcatcctcaccacctccgacatctt 433 | || ||||||||||||||||||| |||||| Sbjct: 4354765 cttcaagcatcctcaccacctccgccatctt 4354735 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 4343521 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 4343462 Query: 403 cctccagcatcctcaccacctccgacatcttggg 436 | || ||||||||||| ||||||| ||||||||| Sbjct: 4343461 cttcaagcatcctcacaacctccgccatcttggg 4343428 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 393 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 441 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 21571634 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 21571682 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 |||||||| || ||||||||||| || ||||| || ||||| || |||||||| || | Sbjct: 4343024 acccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgt 4342965 Query: 630 tgtccagtgataagctccagaagcat 655 ||||| || |||||||||| |||||| Sbjct: 4342964 tgtcctgttataagctccaaaagcat 4342939 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 agcatcctcaccacctccgacatcttggg 436 |||||||||||||||||| ||||||||| Sbjct: 4438935 agcatcctcaccacctccaccatcttggg 4438907
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 117619 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 117560 Query: 403 cctccagcatcctcaccacctccgacatctt 433 | || ||||||||||||||||||| |||||| Sbjct: 117559 cttcaagcatcctcaccacctccgccatctt 117529 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 106315 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 106256 Query: 403 cctccagcatcctcaccacctccgacatcttggg 436 | || ||||||||||| ||||||| ||||||||| Sbjct: 106255 cttcaagcatcctcacaacctccgccatcttggg 106222 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 |||||||| || ||||||||||| || ||||| || ||||| || |||||||| || | Sbjct: 105818 acccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgt 105759 Query: 630 tgtccagtgataagctccagaagcat 655 ||||| || |||||||||| |||||| Sbjct: 105758 tgtcctgttataagctccaaaagcat 105733
>dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_B10 Length = 115074 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2001 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1942 Query: 403 cctccagcatcctcaccacctccgacatctt 433 | || ||||||||||||||||||| |||||| Sbjct: 1941 cttcaagcatcctcaccacctccgccatctt 1911 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 agcatcctcaccacctccgacatcttggg 436 |||||||||||||||||| ||||||||| Sbjct: 86111 agcatcctcaccacctccaccatcttggg 86083
>gb|BT002217.1| Arabidopsis thaliana At1g71830/F14O23_24 mRNA, complete cds Length = 1878 Score = 61.9 bits (31), Expect = 3e-06 Identities = 100/123 (81%) Strand = Plus / Minus Query: 536 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 595 |||||| | ||||||||| |||| || ||||||||||||||||| | |||||| ||||| Sbjct: 1599 catctctagcttcttctccttcaacaatcctttcacccagtcaagtaacatgacgtcgtc 1540 Query: 596 gtcattcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcat 655 ||| || || || || ||||| || || || || ||||| ||||| || || |||||||| Sbjct: 1539 gtcgttagctagccgagcgagatcgaaagctctttgtcctgtgattagttctagaagcat 1480 Query: 656 gat 658 ||| Sbjct: 1479 gat 1477 Score = 44.1 bits (22), Expect = 0.60 Identities = 73/90 (81%) Strand = Plus / Minus Query: 386 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 445 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 1749 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 1690 Query: 446 cggtgacccctgcgtgcacagcagcgccac 475 ||||| || |||||||| |||| |||||| Sbjct: 1689 tggtgatccttgcgtgcatagcaacgccac 1660
>dbj|AK071471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095L06, full insert sequence Length = 4009 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 3813 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 3754 Query: 403 cctccagcatcctcaccacctccgacatctt 433 | || ||||||||||||||||||| |||||| Sbjct: 3753 cttcaagcatcctcaccacctccgccatctt 3723
>dbj|AK060589.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C11, full insert sequence Length = 1782 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 1559 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1500 Query: 403 cctccagcatcctcaccacctccgacatctt 433 | || ||||||||||||||||||| |||||| Sbjct: 1499 cttcaagcatcctcaccacctccgccatctt 1469
>ref|XM_480325.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2674 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2074 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 2015 Query: 403 cctccagcatcctcaccacctccgacatcttggg 436 | || ||||||||||| ||||||| ||||||||| Sbjct: 2014 cttcaagcatcctcacaacctccgccatcttggg 1981 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 564 cctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaac 623 ||||| |||||||| || ||||||||||| || ||||| || ||||| || |||||||| Sbjct: 1853 ccttttacccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaag 1794 Query: 624 gccctctgtccagtgataagctccagaagcat 655 || | ||||| || |||||||||| |||||| Sbjct: 1793 gcacgttgtcctgttataagctccaaaagcat 1762
>gb|AY463361.1| Oryza sativa (indica cultivar-group) benzothiadiazole-induced somatic embryogenesis receptor kinase 1 (BISERK1) mRNA, complete cds Length = 2351 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 1892 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1833 Query: 403 cctccagcatcctcaccacctccgacatcttggg 436 | || ||||||||||| ||||||| ||||||||| Sbjct: 1832 cttcaagcatcctcacaacctccgccatcttggg 1799 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 564 cctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaac 623 ||||| |||||||| || ||||||||||| || ||||| || ||||| || |||||||| Sbjct: 1671 ccttttacccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaag 1612 Query: 624 gccctctgtccagtgataagctccagaagcat 655 || | ||||| || |||||||||| |||||| Sbjct: 1611 gcacgttgtcctgttataagctccaaaagcat 1580
>dbj|AB188247.1| Oryza sativa (japonica cultivar-group) OsSERK1 mRNA for SERK-family receptor-like protein kinase, complete cds Length = 2674 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2019 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1960 Query: 403 cctccagcatcctcaccacctccgacatcttggg 436 | || ||||||||||| ||||||| ||||||||| Sbjct: 1959 cttcaagcatcctcacaacctccgccatcttggg 1926 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 564 cctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaac 623 ||||| |||||||| || ||||||||||| || ||||| || ||||| || |||||||| Sbjct: 1798 ccttttacccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaag 1739 Query: 624 gccctctgtccagtgataagctccagaagcat 655 || | ||||| || |||||||||| |||||| Sbjct: 1738 gcacgttgtcctgttataagctccaaaagcat 1707
>dbj|AK103038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E16, full insert sequence Length = 2674 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 343 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 402 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2074 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 2015 Query: 403 cctccagcatcctcaccacctccgacatcttggg 436 | || ||||||||||| ||||||| ||||||||| Sbjct: 2014 cttcaagcatcctcacaacctccgccatcttggg 1981 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 564 cctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaac 623 ||||| |||||||| || ||||||||||| || ||||| || ||||| || |||||||| Sbjct: 1853 ccttttacccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaag 1794 Query: 624 gccctctgtccagtgataagctccagaagcat 655 || | ||||| || |||||||||| |||||| Sbjct: 1793 gcacgttgtcctgttataagctccaaaagcat 1762
>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314, complete sequence Length = 126349 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 ||||| || |||| ||| ||||| |||||||| ||||||||||| || || || |||||| Sbjct: 37927 acccaatcgagcaacatcacatcatcgtcattggcaagacgtgctagatcgaaagccctc 37868 Query: 630 tgtccagtgataagctccagaagcat 655 |||||||| || || || |||||||| Sbjct: 37867 tgtccagttattagttcaagaagcat 37842
>ref|XM_482638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2671 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 393 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 441 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1960 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1912
>ref|XM_482637.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2158 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 393 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 441 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1311 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1263
>ref|XM_482636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 393 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 441 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1167 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1215
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 378 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 437 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 16041 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 16100 Query: 438 c 438 | Sbjct: 16101 c 16101
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 378 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 437 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 136098 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 136157 Query: 438 c 438 | Sbjct: 136158 c 136158
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 393 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 441 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 31808 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 31856
>dbj|AK111984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F05, full insert sequence Length = 2158 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 393 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 441 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1311 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1263
>dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067P10, full insert sequence Length = 2671 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 393 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 441 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1960 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1912
>dbj|AK073972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072J21, full insert sequence Length = 2639 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 378 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 437 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 2092 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 2033 Query: 438 c 438 | Sbjct: 2032 c 2032
>gb|AC007454.3|F23M19 Arabidopsis thaliana chromosome 1 BAC F23M19 sequence, complete sequence Length = 88401 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 516 tgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacc 572 |||||||| || ||||| |||||||||| ||||||||| |||| |||||||||||| Sbjct: 72334 tgcaggtcaggatccacaagcatctccagcttcttctccttcaaaagccctttcacc 72390
>dbj|AK105576.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-D11, full insert sequence Length = 1432 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 394 gcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 441 ||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1169 gcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1216
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 357 acctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctc 416 |||||||| || |||||||| ||||| | |||||| ||||| || || |||||||||||| Sbjct: 81304 acctccacgttttgccactcttcccacctctccgcaagcccttctccttccagcatcctc 81363 Query: 417 accacctccgacatc 431 || || || |||||| Sbjct: 81364 acaacttcagacatc 81378
>emb|BX820053.1|CNS0AA0J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZA06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2064 Score = 54.0 bits (27), Expect = 6e-04 Identities = 100/123 (81%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 565 ctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacg 624 |||||||||||| || | ||||| ||| || ||||| ||||| || || || || || | Sbjct: 1692 ctttcacccagttgagtaacatgatatcatcatcatttgcaagccgagcaagatcgaaag 1633 Query: 625 ccctctgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttc 684 || | ||||||||||| ||||| |||||||||| |||||| || |||||||| |||||| Sbjct: 1632 ccttttgtccagtgatgagctcgagaagcatga-ccccgtacccaaaaacatcagtcttc 1574 Query: 685 tca 687 ||| Sbjct: 1573 tca 1571
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete sequence Length = 104009 Score = 52.0 bits (26), Expect = 0.002 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 630 tgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctca 687 ||||||||||| ||||| |||||||||| |||||| || |||||||| ||||||||| Sbjct: 64818 tgtccagtgatgagctcgagaagcatga-ccccgtacccaaaaacatcagtcttctca 64762 Score = 52.0 bits (26), Expect = 0.002 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 630 tgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctca 687 ||||||||||| ||||| |||||||||| |||||| || |||||||| ||||||||| Sbjct: 54334 tgtccagtgatgagctcgagaagcatga-ccccgtacccaaaaacatcagtcttctca 54278
>ref|XM_463808.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1868 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 473 cacctggatcagcgcctccacctcgtgct 501 |||| |||||||||||||||||||||||| Sbjct: 1043 cacccggatcagcgcctccacctcgtgct 1015
>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C06 Length = 110989 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 473 cacctggatcagcgcctccacctcgtgct 501 |||| |||||||||||||||||||||||| Sbjct: 30536 cacccggatcagcgcctccacctcgtgct 30564
>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, clone:OJA1212_C06 Length = 113554 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 473 cacctggatcagcgcctccacctcgtgct 501 |||| |||||||||||||||||||||||| Sbjct: 33101 cacccggatcagcgcctccacctcgtgct 33129
>dbj|AK120063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K22, full insert sequence Length = 1867 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 473 cacctggatcagcgcctccacctcgtgct 501 |||| |||||||||||||||||||||||| Sbjct: 1041 cacccggatcagcgcctccacctcgtgct 1013
>gb|U93048.1|DCU93048 Daucus carota somatic embryogenesis receptor-like kinase mRNA, complete cds Length = 1755 Score = 50.1 bits (25), Expect = 0.010 Identities = 103/129 (79%) Strand = Plus / Minus Query: 518 caggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacccagtc 577 |||||| || || ||||||||||||| ||| |||||||||| || | ||| ||||| || Sbjct: 1434 caggtcaggatcgaccagcatctccaactttttctctttcaaaaggcttttaacccaatc 1375 Query: 578 aagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctctgtccagt 637 | || ||| ||||| || || |||||||| || || || ||||| || ||||||||||| Sbjct: 1374 caacaacataacatcatcatcgttcgcaaggcgagcaagatcaaaagctctctgtccagt 1315 Query: 638 gataagctc 646 || ||||| Sbjct: 1314 aatgagctc 1306
>ref|NM_188526.1| Oryza sativa (japonica cultivar-group), Ozsa8195 predicted mRNA Length = 1926 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 408 agcatcctcaccacctccgacatcttgggccg 439 |||||||||||||| ||||||||||| ||||| Sbjct: 1820 agcatcctcaccacgtccgacatcttaggccg 1789
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 408 agcatcctcaccacctccgacatcttgggccg 439 |||||||||||||| ||||||||||| ||||| Sbjct: 6765867 agcatcctcaccacgtccgacatcttaggccg 6765898 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 gtcgccctccagcatcctcaccacctccg 426 |||||||||||||||||||| | |||||| Sbjct: 38314121 gtcgccctccagcatcctcagcgcctccg 38314093
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 408 agcatcctcaccacctccgacatcttgggccg 439 |||||||||||||| ||||||||||| ||||| Sbjct: 118019 agcatcctcaccacgtccgacatcttaggccg 118050
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 408 agcatcctcaccacctccgacatcttgggccg 439 |||||||||||||| ||||||||||| ||||| Sbjct: 47928 agcatcctcaccacgtccgacatcttaggccg 47959
>dbj|AK110821.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H01, full insert sequence Length = 1730 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 408 agcatcctcaccacctccgacatcttgggccg 439 |||||||||||||| ||||||||||| ||||| Sbjct: 1374 agcatcctcaccacgtccgacatcttaggccg 1343
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 401 gccctccagcatcctcaccacctc 424 |||||||||||||||||||||||| Sbjct: 3780962 gccctccagcatcctcaccacctc 3780985 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gccagctccgcctcctgccgg 353 ||||||||||||||||||||| Sbjct: 4036418 gccagctccgcctcctgccgg 4036438 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 cctggatcagcgcctccacct 495 ||||||||||||||||||||| Sbjct: 1898534 cctggatcagcgcctccacct 1898514
>ref|NM_185793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 870 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 527 gtccaccagcatctccaccttcttctc 553 ||||||||||| ||||||||||||||| Sbjct: 546 gtccaccagcacctccaccttcttctc 520
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 527 gtccaccagcatctccaccttcttctc 553 ||||||||||| ||||||||||||||| Sbjct: 9333911 gtccaccagcacctccaccttcttctc 9333885
>emb|BX814202.1|CNS0AEBB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 657 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 536 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 595 |||||| | ||||||||| |||| || |||||||||||||||| | |||||| ||||| Sbjct: 103 catctctagcttcttctccttcaacaatactttcacccagtcaagtaacatgacgtcgtc 44 Query: 596 gtc 598 ||| Sbjct: 43 gtc 41 Score = 44.1 bits (22), Expect = 0.60 Identities = 73/90 (81%) Strand = Plus / Minus Query: 386 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 445 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 253 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 194 Query: 446 cggtgacccctgcgtgcacagcagcgccac 475 ||||| || |||||||| |||| |||||| Sbjct: 193 tggtgatccttgcgtgcatagcaacgccac 164
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 527 gtccaccagcatctccaccttcttctc 553 ||||||||||| ||||||||||||||| Sbjct: 101252 gtccaccagcacctccaccttcttctc 101226
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 527 gtccaccagcatctccaccttcttctc 553 ||||||||||| ||||||||||||||| Sbjct: 62321 gtccaccagcacctccaccttcttctc 62295
>dbj|AK066417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067F20, full insert sequence Length = 2500 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 527 gtccaccagcatctccaccttcttctc 553 ||||||||||| ||||||||||||||| Sbjct: 1768 gtccaccagcacctccaccttcttctc 1742
>ref|NM_032727.2| Homo sapiens internexin neuronal intermediate filament protein, alpha (INA), mRNA Length = 3243 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 386 ctccgccagcccgtcgccctccagca 411 ||||||||||||||||| |||||||| Sbjct: 568 ctccgccagcccgtcgcgctccagca 543
>gb|AY249867.1| Manis pentadactyla recombination activating protein 1 (RAG1) gene, partial cds Length = 797 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 536 catctccaccttcttctctttcagca 561 ||||||||||||||||||| |||||| Sbjct: 755 catctccaccttcttctctgtcagca 730
>emb|AJ833018.1| Schedonorus pratensis hd1 gene for putative Hd1-like protein and s2539 gene for putative peroxidase Length = 9329 Score = 44.1 bits (22), Expect = 0.60 Identities = 43/50 (86%) Strand = Plus / Minus Query: 384 cgctccgccagcccgtcgccctccagcatcctcaccacctccgacatctt 433 ||||| || ||||||||||| |||||||| | |||||||| |||||||| Sbjct: 157 cgctctgcaagcccgtcgccttccagcatgcggaccacctctgacatctt 108
>emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on chromosome 10 Contains the INA gene for internexin neuronal intermediate filament protein alpha, the RNF134 gene for ring finger protein 134, the TAF5D gene for 100 kD TAF5 RNA polymerase II TATA box binding protein (TBP)-associated factor, a novel gene, the 5' end of the PDCD11 gene for programmed cell death 11 and four CpG islands, complete sequence Length = 174474 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 386 ctccgccagcccgtcgccctccagca 411 ||||||||||||||||| |||||||| Sbjct: 29659 ctccgccagcccgtcgcgctccagca 29634
>ref|XM_784841.1| PREDICTED: Strongylocentrotus purpuratus similar to predicted CDS, peptidase family A16 and RNA-directed DNA polymerase and Integrase, catalytic domain and Zn-finger, CCHC type (XC382) (LOC584997), mRNA Length = 5535 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 ttctctttcagcagccctttca 570 |||||||||||||||||||||| Sbjct: 4139 ttctctttcagcagccctttca 4118
>ref|XM_784820.1| PREDICTED: Strongylocentrotus purpuratus similar to predicted CDS, peptidase family A16 and RNA-directed DNA polymerase and Integrase, catalytic domain and Zn-finger, CCHC type (XC382) (LOC584976), mRNA Length = 5670 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 ttctctttcagcagccctttca 570 |||||||||||||||||||||| Sbjct: 4235 ttctctttcagcagccctttca 4214
>gb|S78296.1| neurofilament-66 [human, fetal brain, mRNA, 3197 nt] Length = 3197 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 386 ctccgccagcccgtcgccctccagca 411 ||||||||||||||||| |||||||| Sbjct: 555 ctccgccagcccgtcgcgctccagca 530
>gb|AC012654.2|F14O23 Arabidopsis thaliana chromosome 1 BAC F14O23 sequence, complete sequence Length = 98471 Score = 44.1 bits (22), Expect = 0.60 Identities = 73/90 (81%) Strand = Plus / Minus Query: 386 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 445 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 80974 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 80915 Query: 446 cggtgacccctgcgtgcacagcagcgccac 475 ||||| || |||||||| |||| |||||| Sbjct: 80914 tggtgatccttgcgtgcatagcaacgccac 80885 Score = 42.1 bits (21), Expect = 2.4 Identities = 72/89 (80%) Strand = Plus / Minus Query: 570 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 629 ||||||||||| | |||||| |||||||| || || || || ||||| || || || || Sbjct: 80704 acccagtcaagtaacatgacgtcgtcgtcgttagctagccgagcgagatcgaaagctctt 80645 Query: 630 tgtccagtgataagctccagaagcatgat 658 ||||| ||||| || || ||||||||||| Sbjct: 80644 tgtcctgtgattagttctagaagcatgat 80616
>gb|BC006359.2| Homo sapiens internexin neuronal intermediate filament protein, alpha, mRNA (cDNA clone MGC:12702 IMAGE:4125949), complete cds Length = 3243 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 386 ctccgccagcccgtcgccctccagca 411 ||||||||||||||||| |||||||| Sbjct: 568 ctccgccagcccgtcgcgctccagca 543
>ref|NM_125922.1| Arabidopsis thaliana kinase AT5G65240 mRNA, complete cds Length = 1854 Score = 42.1 bits (21), Expect = 2.4 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 630 tgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctc 686 |||||||| | ||||||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 1481 tgtccagttacaagctccagaagcataat-tccgtacccgaaaacatcggttttctc 1426
>ref|XM_463531.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1941 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 gtcgccctccagcatcctcaccacctccg 426 |||||||||||||||||||| | |||||| Sbjct: 1803 gtcgccctccagcatcctcagcgcctccg 1775
>emb|BX572093.1| Prochlorococcus marinus MED4 complete genome; segment 4/5 Length = 348986 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 527 gtccaccagcatctccaccttcttc 551 ||||||||||||| ||||||||||| Sbjct: 312902 gtccaccagcatcaccaccttcttc 312878
>dbj|AB188249.1| Oryza sativa (japonica cultivar-group) ORK1 gene for SERK family receptor-like protein kinase, partial cds Length = 5675 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 agcatcctcaccacctccgacatcttggg 436 |||||||||||||||||| ||||||||| Sbjct: 2044 agcatcctcaccacctccaccatcttggg 2016
>gb|AY059844.1| Arabidopsis thaliana receptor-like protein kinase (At5g65240; MQN23.19) mRNA, complete cds Length = 2694 Score = 42.1 bits (21), Expect = 2.4 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 630 tgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctc 686 |||||||| | ||||||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 2071 tgtccagttacaagctccagaagcataat-tccgtacccgaaaacatcggttttctc 2016
>gb|BT006309.1| Arabidopsis thaliana At5g65240 mRNA, complete cds Length = 831 Score = 42.1 bits (21), Expect = 2.4 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 630 tgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctc 686 |||||||| | ||||||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 458 tgtccagttacaagctccagaagcataat-tccgtacccgaaaacatcggttttctc 403
>gb|AC007463.3| Homo sapiens BAC clone RP11-244L12 from 2, complete sequence Length = 166892 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 tccaccttctgccactcctcc 380 ||||||||||||||||||||| Sbjct: 148192 tccaccttctgccactcctcc 148212
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 gtcgccctccagcatcctcaccacctccg 426 |||||||||||||||||||| | |||||| Sbjct: 74946 gtcgccctccagcatcctcagcgcctccg 74918
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 ccgcctcctgccggaccacct 360 ||||||||||||||||||||| Sbjct: 103838 ccgcctcctgccggaccacct 103858
>dbj|AB013395.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQN23 Length = 86064 Score = 42.1 bits (21), Expect = 2.4 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 630 tgtccagtgataagctccagaagcatgatgcccgtaaccgaaaacatccgtcttctc 686 |||||||| | ||||||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 73387 tgtccagttacaagctccagaagcataat-tccgtacccgaaaacatcggttttctc 73442
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0583B06 Length = 134442 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 agcatcctcaccacctccgacatcttggg 436 |||||||||||||||||| ||||||||| Sbjct: 4825 agcatcctcaccacctccaccatcttggg 4797
>dbj|D32045.1|RATGENOME Rat gene for alpha 1B adrenergic receptor, promoter region and partial cds Length = 2387 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 ctcctcccagcgctccgccagcccg 398 |||||||||||| |||||||||||| Sbjct: 1322 ctcctcccagcgttccgccagcccg 1346
>ref|XM_515615.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC27019 (LOC459397), mRNA Length = 1367 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 cagcgcctccacctcgtgct 501 |||||||||||||||||||| Sbjct: 474 cagcgcctccacctcgtgct 455
>ref|XM_476607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1456 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 tcgccctccagcatcctcaccacc 422 ||||||||||||||| |||||||| Sbjct: 1213 tcgccctccagcatcttcaccacc 1190
>ref|XM_361443.1| Magnaporthe grisea 70-15 hypothetical protein (MG03917.4) partial mRNA Length = 4320 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 ccagcccgtcgccctccagc 410 |||||||||||||||||||| Sbjct: 1015 ccagcccgtcgccctccagc 996
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 331 gagccagctccgcctcctgccgga 354 ||||||||||||| |||||||||| Sbjct: 2284559 gagccagctccgcttcctgccgga 2284536
>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence Length = 205291 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cttctgccactcctcccagc 384 |||||||||||||||||||| Sbjct: 134441 cttctgccactcctcccagc 134422
>gb|AC140927.2| Mus musculus BAC clone RP23-409D19 from chromosome 5, complete sequence Length = 209257 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 tctccaccttcttctctttc 557 |||||||||||||||||||| Sbjct: 93420 tctccaccttcttctctttc 93401
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 tctccaccttcttctctttc 557 |||||||||||||||||||| Sbjct: 57205 tctccaccttcttctctttc 57186
>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete sequence Length = 179528 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 cagcgcctccacctcgtgct 501 |||||||||||||||||||| Sbjct: 121457 cagcgcctccacctcgtgct 121438
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 40.1 bits (20), Expect = 9.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 386 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatctt 433 |||||| ||||| || || ||||||||||| ||||| || |||||||| Sbjct: 116521 ctccgcaagcccatctccttccagcatcctaaccacttctgacatctt 116474
>gb|AY524043.1| Micromonospora echinospora ATCC 15835 gentamicin biosynthesis gene cluster, complete sequence Length = 38146 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 cagctccgcctcctgccgga 354 |||||||||||||||||||| Sbjct: 30386 cagctccgcctcctgccgga 30405
>gb|AC123830.5| Mus musculus BAC clone RP24-125B17 from chromosome 7, complete sequence Length = 186045 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ccaccttctgccactcctcc 380 |||||||||||||||||||| Sbjct: 67005 ccaccttctgccactcctcc 67024
>emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in linkage group 5, complete sequence Length = 205281 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ggactctgtctgtcatcatg 177 |||||||||||||||||||| Sbjct: 169143 ggactctgtctgtcatcatg 169124
>gb|AC109169.13| Mus musculus chromosome 6, clone RP23-5D6, complete sequence Length = 204911 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 tctccaccttcttctctttc 557 |||||||||||||||||||| Sbjct: 35060 tctccaccttcttctctttc 35041
>emb|BX957326.8| Zebrafish DNA sequence from clone DKEY-31B16 in linkage group 23, complete sequence Length = 259092 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 tggatcagcgcctccacctc 496 |||||||||||||||||||| Sbjct: 170629 tggatcagcgcctccacctc 170648
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 361 ccaccttctgccactcctcccagc 384 |||||||||||| ||||||||||| Sbjct: 247937 ccaccttctgcccctcctcccagc 247914
>emb|AJ575934.2|MPU575934 Micromonospora purpurea DOS biosynthetic gene cluster Length = 32668 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 cagctccgcctcctgccgga 354 |||||||||||||||||||| Sbjct: 6107 cagctccgcctcctgccgga 6088
>gb|AC096622.14| Mus musculus strain 129/SvJ clone mgs1-182e11, complete sequence Length = 131919 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cttctgccactcctcccagc 384 |||||||||||||||||||| Sbjct: 32187 cttctgccactcctcccagc 32206
>ref|NM_170528.2| Drosophila melanogaster CG31012-RD, transcript variant D (CG31012), mRNA Length = 2801 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gtccaccagcatctccacct 546 |||||||||||||||||||| Sbjct: 239 gtccaccagcatctccacct 258
>ref|NM_170526.2| Drosophila melanogaster CG31012-RC, transcript variant C (CG31012), mRNA Length = 3800 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gtccaccagcatctccacct 546 |||||||||||||||||||| Sbjct: 1238 gtccaccagcatctccacct 1257
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 cagcagcgccacctggatcagcgc 487 |||||||| ||||||||||||||| Sbjct: 1286681 cagcagcggcacctggatcagcgc 1286658
>gb|AC008896.6| Homo sapiens chromosome 5 clone CTD-2235B13, complete sequence Length = 128624 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 agctagaaattctgcaacgagggg 211 |||||||||||||| ||||||||| Sbjct: 101989 agctagaaattctgaaacgagggg 102012
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 tcgccctccagcatcctcaccacc 422 ||||||||||||||| |||||||| Sbjct: 2160859 tcgccctccagcatcttcaccacc 2160882
>gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, region 99F-100A, BAC clone BACR48I02, complete sequence Length = 163741 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gtccaccagcatctccacct 546 |||||||||||||||||||| Sbjct: 130558 gtccaccagcatctccacct 130577
>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete sequence Length = 196824 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cttctgccactcctcccagc 384 |||||||||||||||||||| Sbjct: 104709 cttctgccactcctcccagc 104690
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 gcgctccgccagcccgtcgccctccagc 410 ||||||| |||||||||||| ||||||| Sbjct: 3745076 gcgctccaccagcccgtcgcgctccagc 3745103
>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence Length = 208705 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 tctccaccttcttctctttc 557 |||||||||||||||||||| Sbjct: 16936 tctccaccttcttctctttc 16955
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ccagcatcctcaccacctcc 425 |||||||||||||||||||| Sbjct: 2270008 ccagcatcctcaccacctcc 2269989
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 tcgccctccagcatcctcaccacc 422 ||||||||||||||| |||||||| Sbjct: 28761 tcgccctccagcatcttcaccacc 28784
>dbj|AK106343.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G11, full insert sequence Length = 1456 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 tcgccctccagcatcctcaccacc 422 ||||||||||||||| |||||||| Sbjct: 1213 tcgccctccagcatcttcaccacc 1190
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 tcgccctccagcatcctcaccacc 422 ||||||||||||||| |||||||| Sbjct: 116652 tcgccctccagcatcttcaccacc 116675
>gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 113 of 118 of the complete sequence Length = 236096 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gtccaccagcatctccacct 546 |||||||||||||||||||| Sbjct: 147213 gtccaccagcatctccacct 147232
>emb|AJ628149.4| Micromonospora echinospora genomic region of the gentamicin biosynthesis gene cluster, strain DSM 43036 Length = 84222 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 cagctccgcctcctgccgga 354 |||||||||||||||||||| Sbjct: 42630 cagctccgcctcctgccgga 42649
>gb|AC149587.5| Mus musculus BAC clone RP23-472J13 from 5, complete sequence Length = 188522 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ccagctccgcctcctgccgg 353 |||||||||||||||||||| Sbjct: 92333 ccagctccgcctcctgccgg 92314
>gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complete sequence Length = 167731 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 tctccaccttcttctctttc 557 |||||||||||||||||||| Sbjct: 124045 tctccaccttcttctctttc 124026
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b, complete sequence Length = 92148 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 caccttcttctctttcagca 561 |||||||||||||||||||| Sbjct: 67460 caccttcttctctttcagca 67441
>gb|U59415.1|CHU59415 Clostridium hungatei nitrogenase 3 subunit H (anfH) gene, partial cds, subunit D (anfD) and G (anfG) genes, complete cds, and subunit K (anfK) gene, partial cds Length = 3070 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 cttctctttcagcagccctt 567 |||||||||||||||||||| Sbjct: 2467 cttctctttcagcagccctt 2448
>emb|AL163636.7|CNS01RIK Human chromosome 14 DNA sequence BAC R-903H12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 202337 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 tccaccttcttctctttcag 559 |||||||||||||||||||| Sbjct: 72311 tccaccttcttctctttcag 72292
>gb|M23528.1|AVINIFHDGK A.vinelandii nitrogenase 3 (anf) subunits H,D,G,K genes, complete cds, and ORFs Length = 6108 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 cttctctttcagcagccctt 567 |||||||||||||||||||| Sbjct: 3474 cttctctttcagcagccctt 3455 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,938,320 Number of Sequences: 3902068 Number of extensions: 5938320 Number of successful extensions: 142866 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 141596 Number of HSP's gapped (non-prelim): 1253 length of query: 687 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 664 effective length of database: 17,143,297,704 effective search space: 11383149675456 effective search space used: 11383149675456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)