ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2o17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL928822.6| Mouse DNA sequence from clone RP23-419O21 on chr... 44 0.065
2emb|AL954219.1| Pan troglodytes chromosome 22 clone PTB-302M06 m... 42 0.26
3emb|BX640595.13| Zebrafish DNA sequence from clone CH211-117K11 ... 42 0.26
4emb|BX571792.9| Zebrafish DNA sequence from clone CH211-177D9 in... 42 0.26
5gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, com... 42 0.26
6dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 0.26
7emb|AL954221.1| Pan troglodytes chromosome 22 clone RP43-105F23 ... 42 0.26
8emb|AL954220.1| Pan troglodytes chromosome 22 clone PTB-091C04 m... 42 0.26
9dbj|AP001037.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 0.26
10gb|AC123609.11| Mus musculus chromosome 3, clone RP23-281B17, co... 40 1.0
11gb|AC004945.1| Homo sapiens PAC clone RP5-997N5 from 7, complete... 40 1.0
12emb|Z97056.1|HS434P1 Human DNA sequence from clone RP3-434P1 on ... 40 1.0
13emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on ch... 40 1.0
14gb|AC153567.6| Mus musculus 10 BAC RP23-187C5 (Roswell Park Canc... 40 1.0
15gb|AC106845.8| Homo sapiens chromosome 8, clone RP11-183J19, com... 40 1.0
16gb|AC015641.9| Homo sapiens chromosome 8, clone RP11-45O16, comp... 40 1.0
17gb|AC074120.9| Homo sapiens BAC clone RP11-724M22 from 4, comple... 40 1.0
18gb|AC096770.3| Homo sapiens BAC clone RP11-755P13 from 2, comple... 40 1.0
19gb|AC021534.19| Homo sapiens chromosome 17, clone RP11-398J5, co... 40 1.0
20dbj|D00718.1|RATB5RG Rattus norvegicus b5R gene for NADH-cytochr... 40 1.0
21dbj|AP001818.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 1.0
22gb|AC167143.2| Mus musculus BAC clone RP23-38J9 from chromosome ... 38 4.0
23ref|XM_507359.1| PREDICTED Oryza sativa (japonica cultivar-group... 38 4.0
24ref|XM_506250.2| PREDICTED Oryza sativa (japonica cultivar-group... 38 4.0
25ref|NM_186920.2| Oryza sativa (japonica cultivar-group), mRNA 38 4.0
26ref|NM_185793.1| Oryza sativa (japonica cultivar-group), predic... 38 4.0
27gb|AY298909.1| Trypanosoma cruzi cosmid C2 mucin-like protein an... 38 4.0
28ref|XM_872670.1| PREDICTED: Bos taurus similar to Nucleosome ass... 38 4.0
29ref|XM_864231.1| PREDICTED: Bos taurus similar to Nucleosome ass... 38 4.0
30ref|XM_418390.1| PREDICTED: Gallus gallus similar to potassium c... 38 4.0
31gb|BC043610.1| Homo sapiens purinergic receptor P2Y, G-protein c... 38 4.0
32gb|AC146435.3| Pan troglodytes BAC clone RP43-15P23 from 7, comp... 38 4.0
33gb|AC147331.3| Pan troglodytes BAC clone RP43-10H17 from 7, comp... 38 4.0
34gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, compl... 38 4.0
35ref|NM_178129.3| Homo sapiens purinergic receptor P2Y, G-protein... 38 4.0
36gb|AC004808.1| Homo sapiens PAC clone RP4-587D13 from 7, complet... 38 4.0
37gb|AC138894.2| Homo sapiens chromosome 16 clone RP11-435I10, com... 38 4.0
38ref|XM_808120.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 4.0
39gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome... 38 4.0
40ref|XM_812220.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 4.0
41gb|BC012792.2| Homo sapiens purinergic receptor P2Y, G-protein c... 38 4.0
42gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, com... 38 4.0
43gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome... 38 4.0
44gb|AC183337.3| Oryctolagus cuniculus clone LB1-162M15, complete ... 38 4.0
45emb|AL683870.15| Human DNA sequence from clone RP11-261P4 on chr... 38 4.0
46emb|AL606465.21| Human DNA sequence from clone RP11-781D11 on ch... 38 4.0
47emb|AL354928.9| Human DNA sequence from clone RP11-175D17 on chr... 38 4.0
48emb|AL160291.31| Human DNA sequence from clone RP11-85G18 on chr... 38 4.0
49gb|AC026454.5| Homo sapiens chromosome 16 clone CTD-2597E15, com... 38 4.0
50emb|AL672175.7| Mouse DNA sequence from clone RP23-205A9 on chro... 38 4.0
51emb|AL833184.1|HSM804495 Homo sapiens mRNA; cDNA DKFZp667H065 (f... 38 4.0
52dbj|AK092956.1| Homo sapiens cDNA FLJ35637 fis, clone SPLEN2012115 38 4.0
53gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 gen... 38 4.0
54gb|AC022137.6| Homo sapiens chromosome 19 clone CTD-2224J9, comp... 38 4.0
55dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
56dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
57dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
58gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, comp... 38 4.0
59dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
60dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
61dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
62gb|AC117651.8| Mus musculus chromosome 3, clone RP23-287I17, com... 38 4.0
63dbj|AP003756.5| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
64dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
65gb|AC124615.11| Mus musculus chromosome 5, clone RP24-445F15, co... 38 4.0
66gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, co... 38 4.0
67dbj|AK106061.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.0
68gb|AC004264.1|AC004264 Homo sapiens PAC clone RP1-102K2 from 22q... 38 4.0
69dbj|AK069407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.0
70dbj|AK068718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.0
71dbj|AK066417.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.0
72dbj|AP001876.5| Homo sapiens genomic DNA, chromosome 11 clone:CT... 38 4.0
73dbj|AP000652.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 4.0
74gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 4.0
75gb|AC162175.10| Mus musculus chromosome 7, clone RP23-327E18, co... 38 4.0
76gb|AC115893.10| Mus musculus chromosome 1, clone RP24-442I13, co... 38 4.0
77emb|AL929065.4| Mouse DNA sequence from clone RP23-270H4 on chro... 38 4.0 
>emb|AL928822.6| Mouse DNA sequence from clone RP23-419O21 on chromosome 2, complete
             sequence
          Length = 101335

 Score = 44.1 bits (22), Expect = 0.065
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 43    aggggagaagcaggaggtgggagtgggaga 72
             |||||||||| ||||||||||||| |||||
Sbjct: 16445 aggggagaaggaggaggtgggagtaggaga 16416
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>emb|AL954219.1| Pan troglodytes chromosome 22 clone PTB-302M06 map q21.2, complete
              sequence
          Length = 128963

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 48     agaagcaggaggtgggagtgggaga 72
              ||||||||||||| |||||||||||
Sbjct: 120327 agaagcaggaggttggagtgggaga 120351
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>emb|BX640595.13| Zebrafish DNA sequence from clone CH211-117K11 in linkage group 2,
             complete sequence
          Length = 121429

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 45    gggagaagcaggaggtgggagtgggagag 73
             ||||||| ||||||| |||||||||||||
Sbjct: 91781 gggagaaacaggaggagggagtgggagag 91753
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>emb|BX571792.9| Zebrafish DNA sequence from clone CH211-177D9 in linkage group 12,
             complete sequence
          Length = 141671

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 5     aaatagacagatggagcaatt 25
             |||||||||||||||||||||
Sbjct: 22149 aaatagacagatggagcaatt 22129
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>gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, complete sequence
          Length = 212548

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 53     caggaggtgggagtgggagag 73
              |||||||||||||||||||||
Sbjct: 119054 caggaggtgggagtgggagag 119074
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>dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, section 76/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    agaagcaggaggtgggagtgggaga 72
             ||||||||||||| |||||||||||
Sbjct: 82605 agaagcaggaggttggagtgggaga 82629
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>emb|AL954221.1| Pan troglodytes chromosome 22 clone RP43-105F23 map q21.2, complete
             sequence
          Length = 169077

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    agaagcaggaggtgggagtgggaga 72
             ||||||||||||| |||||||||||
Sbjct: 26075 agaagcaggaggttggagtgggaga 26099
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>emb|AL954220.1| Pan troglodytes chromosome 22 clone PTB-091C04 map q21.2, complete
             sequence
          Length = 241304

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    agaagcaggaggtgggagtgggaga 72
             ||||||||||||| |||||||||||
Sbjct: 27485 agaagcaggaggttggagtgggaga 27509
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>dbj|AP001037.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2042G5, ERG-ETS2
             region, complete sequence
          Length = 165644

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    agaagcaggaggtgggagtgggaga 72
             ||||||||||||| |||||||||||
Sbjct: 69486 agaagcaggaggttggagtgggaga 69510
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>gb|AC123609.11| Mus musculus chromosome 3, clone RP23-281B17, complete sequence
          Length = 223516

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    gcaggaggtgggagtgggag 71
             ||||||||||||||||||||
Sbjct: 62846 gcaggaggtgggagtgggag 62827
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>gb|AC004945.1| Homo sapiens PAC clone RP5-997N5 from 7, complete sequence
          Length = 167372

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    gaggtgggagtgggagaggg 75
             ||||||||||||||||||||
Sbjct: 89753 gaggtgggagtgggagaggg 89772
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>emb|Z97056.1|HS434P1 Human DNA sequence from clone RP3-434P1 on chromosome 22, complete
             sequence
          Length = 124990

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    gcaggaggtgggagtgggag 71
             ||||||||||||||||||||
Sbjct: 78281 gcaggaggtgggagtgggag 78300
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>emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on chromosome 9 Contains the 5'
              end of a variant of a novel gene (FLJ90578) and a CpG
              island, complete sequence
          Length = 174535

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 54     aggaggtgggagtgggagagggat 77
              |||||||||||||||||| |||||
Sbjct: 154757 aggaggtgggagtgggagtgggat 154780
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>gb|AC153567.6| Mus musculus 10 BAC RP23-187C5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226945

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 48     agaagcaggaggtgggagtgggagaggg 75
              |||||||||||| |||||||||| ||||
Sbjct: 117061 agaagcaggaggagggagtgggataggg 117088
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>gb|AC106845.8| Homo sapiens chromosome 8, clone RP11-183J19, complete sequence
          Length = 166676

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   ggaggtgggagtgggagagg 74
            ||||||||||||||||||||
Sbjct: 5888 ggaggtgggagtgggagagg 5907
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>gb|AC015641.9| Homo sapiens chromosome 8, clone RP11-45O16, complete sequence
          Length = 154580

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     ggaggtgggagtgggagagg 74
              ||||||||||||||||||||
Sbjct: 143768 ggaggtgggagtgggagagg 143787
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>gb|AC074120.9| Homo sapiens BAC clone RP11-724M22 from 4, complete sequence
          Length = 150013

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    aggtgggagtgggagaggga 76
             ||||||||||||||||||||
Sbjct: 77082 aggtgggagtgggagaggga 77063
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>gb|AC096770.3| Homo sapiens BAC clone RP11-755P13 from 2, complete sequence
          Length = 197605

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    ggaggtgggagtgggagagg 74
             ||||||||||||||||||||
Sbjct: 81431 ggaggtgggagtgggagagg 81412
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>gb|AC021534.19| Homo sapiens chromosome 17, clone RP11-398J5, complete sequence
          Length = 185419

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    aggaggtgggagtgggagag 73
             ||||||||||||||||||||
Sbjct: 91365 aggaggtgggagtgggagag 91346
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>dbj|D00718.1|RATB5RG Rattus norvegicus b5R gene for NADH-cytochrome b5 reductase, exon 1
           and 5' flanking region
          Length = 1387

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  ggggagaagcaggaggtggg 63
           ||||||||||||||||||||
Sbjct: 478 ggggagaagcaggaggtggg 459
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>dbj|AP001818.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2222M9, complete
             sequence
          Length = 116321

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    aggtgggagtgggagaggga 76
             ||||||||||||||||||||
Sbjct: 58939 aggtgggagtgggagaggga 58920
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>gb|AC167143.2| Mus musculus BAC clone RP23-38J9 from chromosome 3, complete sequence
          Length = 187770

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 47     gagaagcaggaggtgggagtggg 69
              |||||||||||||| ||||||||
Sbjct: 152886 gagaagcaggaggtaggagtggg 152908
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>ref|XM_507359.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1354_H07.109
           mRNA
          Length = 1133

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 54  aggaggtgggagtgggagaggga 76
           ||||||| |||||||||||||||
Sbjct: 289 aggaggtcggagtgggagaggga 267
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>ref|XM_506250.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1354_H07.109
           mRNA
          Length = 1144

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 54  aggaggtgggagtgggagaggga 76
           ||||||| |||||||||||||||
Sbjct: 290 aggaggtcggagtgggagaggga 268
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>ref|NM_186920.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1035

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 54  aggaggtgggagtgggagaggga 76
           ||||||| |||||||||||||||
Sbjct: 294 aggaggtcggagtgggagaggga 272
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>ref|NM_185793.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 870

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 58  ggtgggagtgggagaggga 76
           |||||||||||||||||||
Sbjct: 748 ggtgggagtgggagaggga 730
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>gb|AY298909.1| Trypanosoma cruzi cosmid C2 mucin-like protein and gp85-like protein
             (gp-85) genes, complete cds; and unknown genes
          Length = 30331

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 12    cagatggagcaattttttctgcg 34
             ||||||| |||||||||||||||
Sbjct: 12035 cagatggtgcaattttttctgcg 12057
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>ref|XM_872670.1| PREDICTED: Bos taurus similar to Nucleosome assembly protein
          1-like 1 (NAP-1 related protein) (hNRP), transcript
          variant 2 (LOC614785), mRNA
          Length = 1439

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 45 gggagaagcaggaggtggg 63
          |||||||||||||||||||
Sbjct: 47 gggagaagcaggaggtggg 29
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>ref|XM_864231.1| PREDICTED: Bos taurus similar to Nucleosome assembly protein
          1-like 1 (NAP-1 related protein) (hNRP), transcript
          variant 1 (LOC614785), mRNA
          Length = 1224

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 45 gggagaagcaggaggtggg 63
          |||||||||||||||||||
Sbjct: 41 gggagaagcaggaggtggg 23
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>ref|XM_418390.1| PREDICTED: Gallus gallus similar to potassium channel, subfamily V,
           member 1; neuronal potassium channel alpha subunit;
           potassium channel Kv8.1 (LOC420278), mRNA
          Length = 1938

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 46  ggagaagcaggaggtgggagtgg 68
           |||||||||| ||||||||||||
Sbjct: 696 ggagaagcagaaggtgggagtgg 718
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>gb|BC043610.1| Homo sapiens purinergic receptor P2Y, G-protein coupled, 8, mRNA
            (cDNA clone MGC:50878 IMAGE:5787268), complete cds
          Length = 4206

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 55   ggaggtgggagtgggagag 73
            |||||||||||||||||||
Sbjct: 2588 ggaggtgggagtgggagag 2606
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>gb|AC146435.3| Pan troglodytes BAC clone RP43-15P23 from 7, complete sequence
          Length = 192805

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    aggaggtgggagtgggaga 72
             |||||||||||||||||||
Sbjct: 65015 aggaggtgggagtgggaga 64997
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>gb|AC147331.3| Pan troglodytes BAC clone RP43-10H17 from 7, complete sequence
          Length = 189220

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    aggaggtgggagtgggaga 72
             |||||||||||||||||||
Sbjct: 29741 aggaggtgggagtgggaga 29723
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>gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, complete sequence
          Length = 228889

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     aagcaggaggtgggagtgg 68
              |||||||||||||||||||
Sbjct: 170679 aagcaggaggtgggagtgg 170661
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>ref|NM_178129.3| Homo sapiens purinergic receptor P2Y, G-protein coupled, 8 (P2RY8),
            mRNA
          Length = 4208

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 55   ggaggtgggagtgggagag 73
            |||||||||||||||||||
Sbjct: 2588 ggaggtgggagtgggagag 2606
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>gb|AC004808.1| Homo sapiens PAC clone RP4-587D13 from 7, complete sequence
          Length = 123397

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    aggaggtgggagtgggaga 72
             |||||||||||||||||||
Sbjct: 54089 aggaggtgggagtgggaga 54071
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>gb|AC138894.2| Homo sapiens chromosome 16 clone RP11-435I10, complete sequence
          Length = 182289

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 46     ggagaagcaggaggtggga 64
              |||||||||||||||||||
Sbjct: 164809 ggagaagcaggaggtggga 164791
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>ref|XM_808120.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506285.80) partial mRNA
          Length = 843

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 12  cagatggagcaattttttctgcg 34
           ||||||| |||||||||||||||
Sbjct: 778 cagatggtgcaattttttctgcg 800
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>gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome 2, complete sequence
          Length = 212563

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 54     aggaggtgggagtgggagaggga 76
              |||||||||||||||||| ||||
Sbjct: 208135 aggaggtgggagtgggaggggga 208113
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>ref|XM_812220.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509699.170) partial mRNA
          Length = 843

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 12  cagatggagcaattttttctgcg 34
           ||||||| |||||||||||||||
Sbjct: 778 cagatggtgcaattttttctgcg 800
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>gb|BC012792.2| Homo sapiens purinergic receptor P2Y, G-protein coupled, 8, mRNA
           (cDNA clone IMAGE:4053773), partial cds
          Length = 2034

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 55  ggaggtgggagtgggagag 73
           |||||||||||||||||||
Sbjct: 424 ggaggtgggagtgggagag 442
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>gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, complete sequence
          Length = 229721

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    aagcaggaggtgggagtgg 68
             |||||||||||||||||||
Sbjct: 67029 aagcaggaggtgggagtgg 67011
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>gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome 9, complete sequence
          Length = 215370

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     gagaagcaggaggtgggag 65
              |||||||||||||||||||
Sbjct: 166569 gagaagcaggaggtgggag 166551
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>gb|AC183337.3| Oryctolagus cuniculus clone LB1-162M15, complete sequence
          Length = 92063

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 43    aggggagaagcaggaggtgggag 65
             |||||||||| ||||||||||||
Sbjct: 17636 aggggagaagaaggaggtgggag 17658
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>emb|AL683870.15| Human DNA sequence from clone RP11-261P4 on chromosome X Contains the
             3' end of the IL3RA gene for interleukin 3 receptor, alpha
             (low affinity) (IL3R, CD123, IL3RX, IL3RY, IL3RAY,
             hIL-3Ra, MGC34174), the SLC25A6 gene for solute carrier
             family 25 (mitochondrial carrier; adenine nucleotide
             translocator), member 6 (ANT3, ANT3Y, MGC17525), the ASMTL
             gene for acetylserotonin O-methyltransferase-like
             (ASMTLX), a novel gene (LOC286530), a novel gene
             (FLJ13330) and six CpG islands, complete sequence
          Length = 162377

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 55    ggaggtgggagtgggagag 73
             |||||||||||||||||||
Sbjct: 85120 ggaggtgggagtgggagag 85102
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>emb|AL606465.21| Human DNA sequence from clone RP11-781D11 on chromosome 1 Contains a
             translation initiation factor SUI1 (SUI1) pseudogene, the
             gene for a novel protein (FLJ12666, FLJ44274), the NDUFS5
             gene for 15kDA NADH dehydrogenase (ubiquinone) Fe-S
             protein 5 (NADH-coenzyme Q reductase) and a CpG island,
             complete sequence
          Length = 116103

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    ggtgggagtgggagaggga 76
             |||||||||||||||||||
Sbjct: 47268 ggtgggagtgggagaggga 47250
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>emb|AL354928.9| Human DNA sequence from clone RP11-175D17 on chromosome 9 Contains the 5'
              end of the NR6A1 gene for nuclear receptor (subfamily 6,
              group A) member 1, three novel genes, the RPL35 gene for
              ribosomal protein L35, the gene for a hypothetical protein
              similar to actin related protein 2/3 complex subunit 5
              (MGC3038), the 3' end of the GOLGA1 gene for golgi
              autoantigen (golgin subfamily a, 1) and six CpG islands,
              complete sequence
          Length = 176539

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     gagaagcaggaggtgggag 65
              |||||||||||||||||||
Sbjct: 146649 gagaagcaggaggtgggag 146667
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>emb|AL160291.31| Human DNA sequence from clone RP11-85G18 on chromosome 10 Contains the 5'
              end of the YME1L1 gene for YME1-like 1 (S. cerevisiae), the
              gene for a novel protein kinase domain containing protein
              (FLJ14813), the gene for endozepine-related protein
              precursor (DKFZp434A2417) (FLJ32907 KIAA1996), a novel
              pseudogene (KIAA0563, FLJ34306), the 5' end of a novel
              pseudogene (FLJ10376) and six CpG islands, complete
              sequence
          Length = 155962

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 13     agatggagcaattttttct 31
              |||||||||||||||||||
Sbjct: 136277 agatggagcaattttttct 136259
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>gb|AC026454.5| Homo sapiens chromosome 16 clone CTD-2597E15, complete sequence
          Length = 136331

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    ggagaagcaggaggtggga 64
             |||||||||||||||||||
Sbjct: 79975 ggagaagcaggaggtggga 79993
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>emb|AL672175.7| Mouse DNA sequence from clone RP23-205A9 on chromosome 11 Contains the
              Nog gene for noggin, the 3' end of the gene for a novel
              protein (4932411E22Rik) and one CpG island, complete
              sequence
          Length = 212341

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      aatagacagatggagcaat 24
              |||||||||||||||||||
Sbjct: 175466 aatagacagatggagcaat 175484
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>emb|AL833184.1|HSM804495 Homo sapiens mRNA; cDNA DKFZp667H065 (from clone DKFZp667H065)
          Length = 2580

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 55  ggaggtgggagtgggagag 73
           |||||||||||||||||||
Sbjct: 963 ggaggtgggagtgggagag 981
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>dbj|AK092956.1| Homo sapiens cDNA FLJ35637 fis, clone SPLEN2012115
          Length = 2092

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 55  ggaggtgggagtgggagag 73
           |||||||||||||||||||
Sbjct: 487 ggaggtgggagtgggagag 505
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>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete
             sequence
          Length = 143961

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aggtgggagtgggagaggg 75
             |||||||||||||||||||
Sbjct: 77288 aggtgggagtgggagaggg 77306
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>gb|AC022137.6| Homo sapiens chromosome 19 clone CTD-2224J9, complete sequence
          Length = 137950

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     atggagcaattttttctgc 33
              |||||||||||||||||||
Sbjct: 122528 atggagcaattttttctgc 122510
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 57       aggtgggagtgggagaggg 75
                |||||||||||||||||||
Sbjct: 22425265 aggtgggagtgggagaggg 22425283
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 54      aggaggtgggagtgggagaggga 76
               ||||||| |||||||||||||||
Sbjct: 9021585 aggaggtcggagtgggagaggga 9021563
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 46       ggagaagcaggaggtgggagtgg 68
                ||||||| |||||||||||||||
Sbjct: 20174471 ggagaaggaggaggtgggagtgg 20174449



 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 58      ggtgggagtgggagaggga 76
               |||||||||||||||||||
Sbjct: 9334113 ggtgggagtgggagaggga 9334095
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>gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, complete sequence
          Length = 184453

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 58     ggtgggagtgggagaggga 76
              |||||||||||||||||||
Sbjct: 183739 ggtgggagtgggagaggga 183721
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>dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0007G12
          Length = 111819

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 46    ggagaagcaggaggtgggagtgg 68
             ||||||| |||||||||||||||
Sbjct: 40471 ggagaaggaggaggtgggagtgg 40449
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>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0676F10
          Length = 142510

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 58     ggtgggagtgggagaggga 76
              |||||||||||||||||||
Sbjct: 101454 ggtgggagtgggagaggga 101436
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>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0038C05
          Length = 152941

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    ggtgggagtgggagaggga 76
             |||||||||||||||||||
Sbjct: 62523 ggtgggagtgggagaggga 62505
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>gb|AC117651.8| Mus musculus chromosome 3, clone RP23-287I17, complete sequence
          Length = 229602

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 47     gagaagcaggaggtgggagtggg 69
              |||||||||||||| ||||||||
Sbjct: 161580 gagaagcaggaggtaggagtggg 161558
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>dbj|AP003756.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1370_E02
          Length = 128326

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 54    aggaggtgggagtgggagaggga 76
             ||||||| |||||||||||||||
Sbjct: 11992 aggaggtcggagtgggagaggga 11970
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>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1354_H07
          Length = 157974

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 54    aggaggtgggagtgggagaggga 76
             ||||||| |||||||||||||||
Sbjct: 73028 aggaggtcggagtgggagaggga 73006
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>gb|AC124615.11| Mus musculus chromosome 5, clone RP24-445F15, complete sequence
          Length = 128560

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 55     ggaggtgggagtgggagag 73
              |||||||||||||||||||
Sbjct: 126082 ggaggtgggagtgggagag 126064
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>gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, complete sequence
          Length = 213958

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aagcaggaggtgggagtgg 68
             |||||||||||||||||||
Sbjct: 68114 aagcaggaggtgggagtgg 68132
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>dbj|AK106061.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G01, full
           insert sequence
          Length = 1133

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 54  aggaggtgggagtgggagaggga 76
           ||||||| |||||||||||||||
Sbjct: 289 aggaggtcggagtgggagaggga 267
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>gb|AC004264.1|AC004264 Homo sapiens PAC clone RP1-102K2 from 22q12.1-qter, complete sequence
          Length = 47188

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    caggaggtgggagtgggag 71
             |||||||||||||||||||
Sbjct: 44909 caggaggtgggagtgggag 44891
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>dbj|AK069407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015F07, full
           insert sequence
          Length = 1144

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 54  aggaggtgggagtgggagaggga 76
           ||||||| |||||||||||||||
Sbjct: 290 aggaggtcggagtgggagaggga 268
to top
>dbj|AK068718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013166G07, full
           insert sequence
          Length = 1036

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 54  aggaggtgggagtgggagaggga 76
           ||||||| |||||||||||||||
Sbjct: 294 aggaggtcggagtgggagaggga 272
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>dbj|AK066417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067F20, full
            insert sequence
          Length = 2500

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 58   ggtgggagtgggagaggga 76
            |||||||||||||||||||
Sbjct: 1970 ggtgggagtgggagaggga 1952
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>dbj|AP001876.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2544I7, complete
              sequence
          Length = 197086

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 54     aggaggtgggagtgggaga 72
              |||||||||||||||||||
Sbjct: 169832 aggaggtgggagtgggaga 169850
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>dbj|AP000652.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-8G5, complete
             sequence
          Length = 115530

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    aggaggtgggagtgggaga 72
             |||||||||||||||||||
Sbjct: 80405 aggaggtgggagtgggaga 80423
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 57       aggtgggagtgggagaggg 75
                |||||||||||||||||||
Sbjct: 22437333 aggtgggagtgggagaggg 22437351
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>gb|AC162175.10| Mus musculus chromosome 7, clone RP23-327E18, complete sequence
          Length = 224178

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    ggaggtgggagtgggagag 73
             |||||||||||||||||||
Sbjct: 61113 ggaggtgggagtgggagag 61131
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>gb|AC115893.10| Mus musculus chromosome 1, clone RP24-442I13, complete sequence
          Length = 153053

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    ggtgggagtgggagaggga 76
             |||||||||||||||||||
Sbjct: 80927 ggtgggagtgggagaggga 80909
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>emb|AL929065.4| Mouse DNA sequence from clone RP23-270H4 on chromosome 2, complete
             sequence
          Length = 173846

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 54    aggaggtgggagtgggagaggga 76
             |||||||||||||||||| ||||
Sbjct: 89597 aggaggtgggagtgggaggggga 89619


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 992,886
Number of Sequences: 3902068
Number of extensions: 992886
Number of successful extensions: 89373
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89134
Number of HSP's gapped (non-prelim): 239
length of query: 93
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 72
effective length of database: 17,151,101,840
effective search space: 1234879332480
effective search space used: 1234879332480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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