ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3d15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1METE_AQUAE (O67606) 5-methyltetrahydropteroyltriglutamate--homoc... 28 4.7

>METE_AQUAE (O67606) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 761

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 260 ALSLLDIFEDKDDA**RLLSADQGTVEEGTACNKMDW 150
           AL+LLD  +D ++A  +++  D+    EG    K DW
Sbjct: 581 ALALLDEVKDLENAGIKVIQIDEPAFREGAPLKKRDW 617


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,626,944
Number of Sequences: 219361
Number of extensions: 573770
Number of successful extensions: 962
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top