ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3d15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC113106.9| Mus musculus chromosome 9, clone RP23-325C1, comp... 50 0.004
2gb|AC113127.6| Mus musculus chromosome 9, clone RP23-352H13, com... 50 0.004
3emb|BX323574.12| Zebrafish DNA sequence from clone DKEY-180F8, c... 46 0.058
4dbj|AK061870.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.058
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.058
6dbj|AK106151.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.058
7dbj|AK067529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.058
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.058
9emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.058
10emb|CR933529.9| Zebrafish DNA sequence from clone DKEY-206N17 in... 44 0.23
11gb|AC084855.4| Homo sapiens chromosome 15, clone CTD-3076O17, co... 44 0.23
12dbj|AK057529.1| Homo sapiens cDNA FLJ32967 fis, clone TESTI2008715 44 0.23
13dbj|AK057331.1| Homo sapiens cDNA FLJ32769 fis, clone TESTI2001894 44 0.23
14emb|BX294375.7| Zebrafish DNA sequence from clone DKEY-176M20 in... 44 0.23
15gb|AC015720.20| Homo sapiens chromosome 15, clone RP11-151H2, co... 44 0.23
16gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome... 42 0.90
17gb|AC125133.2| Mus musculus BAC clone RP24-316A22 from chromosom... 42 0.90
18gb|AC124693.4| Mus musculus BAC clone RP24-167O14 from chromosom... 42 0.90
19gb|AC100491.9| Mus musculus chromosome 9, clone RP23-142M14, com... 42 0.90
20emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chrom... 42 0.90
21emb|BX072572.8| Zebrafish DNA sequence from clone CH211-119A17, ... 42 0.90
22gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, c... 42 0.90
23gb|AC177797.3| Mus musculus BAC clone RP24-558G11 from chromosom... 42 0.90
24gb|AC067796.11| Homo sapiens chromosome 18, clone RP11-609K12, c... 42 0.90
25dbj|AK156919.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 0.90
26emb|AL929507.37| Zebrafish DNA sequence from clone DKEY-7C18 in ... 42 0.90
27emb|AL831756.8| Mouse DNA sequence from clone RP23-300P20 on chr... 42 0.90
28gb|AC159008.2| Mus musculus BAC clone RP23-14E14 from chromosome... 40 3.6
29gb|AC147568.5| Mus musculus chromosome 7 clone RP23-15J23, compl... 40 3.6
30gb|AC102931.10| Mus musculus chromosome 7, clone RP24-221B5, com... 40 3.6
31gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 ma... 40 3.6
32gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's H... 40 3.6
33gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, com... 40 3.6
34gb|AC161289.2| Pan troglodytes BAC clone CH251-170B19 from chrom... 40 3.6
35gb|AC183672.2| Pan troglodytes BAC clone CH251-546K4 from chromo... 40 3.6
36gb|AC152938.3| Mus musculus BAC clone RP23-469O12 from chromosom... 40 3.6
37gb|AC163285.3| Mus musculus BAC clone RP23-379H2 from chromosome... 40 3.6
38gb|AC102125.13| Mus musculus chromosome 6, clone RP23-190E16, co... 40 3.6
39gb|AC124481.2| Mus musculus BAC clone RP24-119I10 from chromosom... 40 3.6
40gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complet... 40 3.6
41gb|AC146024.3| Pan troglodytes BAC clone RP43-119C21 from 7, com... 40 3.6
42emb|AL606526.10| Human DNA sequence from clone RP13-534F18 on ch... 40 3.6
43gb|AC158575.3| Mus musculus chromosome 7, clone RP23-275H16, com... 40 3.6
44gb|AC084026.14| Homo sapiens chromosome 8, clone RP11-486M23, co... 40 3.6
45gb|AC183922.3| Pan troglodytes BAC clone CH251-344F10 from chrom... 40 3.6
46emb|CR352288.9| Zebrafish DNA sequence from clone CH211-123P18 i... 40 3.6
47gb|DQ397629.1| Cenarchaeum symbiosum clone C01B12, complete sequ... 40 3.6
48gb|DQ397558.1| Cenarchaeum symbiosum clone C19H10, complete sequ... 40 3.6
49gb|AC119416.15| Medicago truncatula clone mth2-31m16, complete s... 40 3.6
50gb|AC134836.6| Mus musculus BAC clone RP24-323I5 from chromosome... 40 3.6
51gb|AC148988.5| Mus musculus BAC clone RP23-85B15 from chromosome... 40 3.6
52dbj|AK049512.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 3.6
53dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
54dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
55dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
56dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
57gb|BC044776.2| Mus musculus, clone IMAGE:5361456, mRNA 40 3.6
58dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
59emb|AL773561.7| Mouse DNA sequence from clone RP23-71D9 on chrom... 40 3.6
60gb|AC154427.2| Mus musculus BAC clone RP24-200D20 from 16, compl... 40 3.6
61emb|BX248499.12| Zebrafish DNA sequence from clone CH211-284A13 ... 40 3.6
62gb|AC116882.9| Mus musculus chromosome 8, clone RP24-435G18, com... 40 3.6
63emb|CT954231.1| Medicago truncatula chromosome 5 clone mth2-166e... 40 3.6
64emb|AL928883.19| Mouse DNA sequence from clone RP23-60E18 on chr... 40 3.6
65emb|AL845506.6| Mouse DNA sequence from clone RP23-401M24 on chr... 40 3.6
66gb|L02306.1|RCCMETAL Ricinus communis metallothionein (RCMIT) mR... 40 3.6
67gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complet... 40 3.6
68dbj|AP006704.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 3.6
69gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosom... 40 3.6
70emb|AL626773.18| Mouse DNA sequence from clone RP23-273M9 on chr... 40 3.6
71emb|AL844547.9| Mouse DNA sequence from clone RP23-216B20 on chr... 40 3.6 
>gb|AC113106.9| Mus musculus chromosome 9, clone RP23-325C1, complete sequence
          Length = 191609

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 125   taaatcgtatgtatgtatgtatact 149
             |||||||||||||||||||||||||
Sbjct: 49985 taaatcgtatgtatgtatgtatact 49961
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>gb|AC113127.6| Mus musculus chromosome 9, clone RP23-352H13, complete sequence
          Length = 185801

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 125   taaatcgtatgtatgtatgtatact 149
             |||||||||||||||||||||||||
Sbjct: 24053 taaatcgtatgtatgtatgtatact 24077
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>emb|BX323574.12| Zebrafish DNA sequence from clone DKEY-180F8, complete sequence
          Length = 171724

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 124  ataaatcgtatgtatgtatgtat 146
            |||||||||||||||||||||||
Sbjct: 1250 ataaatcgtatgtatgtatgtat 1228
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>dbj|AK061870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A03, full
            insert sequence
          Length = 1418

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 223  tcatccttgtcttcaaatatatcaaggagggagagagcctcgg 265
            |||||||||||| |||| || ||||| |||||||| |||||||
Sbjct: 1047 tcatccttgtctgcaaagatgtcaagaagggagagcgcctcgg 1005
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 131    gtatgtatgtatgtatactccag 153
              |||||||||||||||||||||||
Sbjct: 457912 gtatgtatgtatgtatactccag 457890
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>dbj|AK106151.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H09, full
            insert sequence
          Length = 1489

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 223  tcatccttgtcttcaaatatatcaaggagggagagagcctcgg 265
            |||||||||||| |||| || ||||| |||||||| |||||||
Sbjct: 1119 tcatccttgtctgcaaagatgtcaagaagggagagcgcctcgg 1077
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>dbj|AK067529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108E24, full
            insert sequence
          Length = 1622

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 223  tcatccttgtcttcaaatatatcaaggagggagagagcctcgg 265
            |||||||||||| |||| || ||||| |||||||| |||||||
Sbjct: 1120 tcatccttgtctgcaaagatgtcaagaagggagagcgcctcgg 1078
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 131    gtatgtatgtatgtatactccag 153
              |||||||||||||||||||||||
Sbjct: 457912 gtatgtatgtatgtatactccag 457890
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>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 141089

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 131   gtatgtatgtatgtatactccag 153
             |||||||||||||||||||||||
Sbjct: 88860 gtatgtatgtatgtatactccag 88882
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>emb|CR933529.9| Zebrafish DNA sequence from clone DKEY-206N17 in linkage group 8,
            complete sequence
          Length = 59760

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 125  taaatcgtatgtatgtatgtat 146
            ||||||||||||||||||||||
Sbjct: 5907 taaatcgtatgtatgtatgtat 5928
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>gb|AC084855.4| Homo sapiens chromosome 15, clone CTD-3076O17, complete sequence
          Length = 180944

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 210    ccttcatcatgcatcatccttg 231
              ||||||||||||||||||||||
Sbjct: 110686 ccttcatcatgcatcatccttg 110707
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>dbj|AK057529.1| Homo sapiens cDNA FLJ32967 fis, clone TESTI2008715
          Length = 1857

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 210 ccttcatcatgcatcatccttg 231
           ||||||||||||||||||||||
Sbjct: 126 ccttcatcatgcatcatccttg 105
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>dbj|AK057331.1| Homo sapiens cDNA FLJ32769 fis, clone TESTI2001894
          Length = 1737

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 210  ccttcatcatgcatcatccttg 231
            ||||||||||||||||||||||
Sbjct: 1521 ccttcatcatgcatcatccttg 1500
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>emb|BX294375.7| Zebrafish DNA sequence from clone DKEY-176M20 in linkage group 17,
             complete sequence
          Length = 188455

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 122   atataaatcgtatgtatgtatgtata 147
             |||||||| |||||||||||||||||
Sbjct: 14700 atataaattgtatgtatgtatgtata 14675
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>gb|AC015720.20| Homo sapiens chromosome 15, clone RP11-151H2, complete sequence
          Length = 174559

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 246   aaggagggagagagcctcggtg 267
             ||||||||||||||||||||||
Sbjct: 66305 aaggagggagagagcctcggtg 66284
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>gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome 19, complete sequence
          Length = 162162

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 126   aaatcgtatgtatgtatgtat 146
             |||||||||||||||||||||
Sbjct: 10807 aaatcgtatgtatgtatgtat 10827
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>gb|AC125133.2| Mus musculus BAC clone RP24-316A22 from chromosome 18, complete sequence
          Length = 175583

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 122    atataaatcgtatgtatgtatgtat 146
              |||||||| ||||||||||||||||
Sbjct: 121036 atataaattgtatgtatgtatgtat 121012
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>gb|AC124693.4| Mus musculus BAC clone RP24-167O14 from chromosome 19, complete sequence
          Length = 160363

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 126    aaatcgtatgtatgtatgtat 146
              |||||||||||||||||||||
Sbjct: 149569 aaatcgtatgtatgtatgtat 149589
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>gb|AC100491.9| Mus musculus chromosome 9, clone RP23-142M14, complete sequence
          Length = 222845

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 132    tatgtatgtatgtatactcca 152
              |||||||||||||||||||||
Sbjct: 104314 tatgtatgtatgtatactcca 104294
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>emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5
          Length = 281723

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   aatcgtatgtatgtatgtata 147
             |||||||||||||||||||||
Sbjct: 99352 aatcgtatgtatgtatgtata 99332



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    tatgtatgtatgtatactcc 151
              ||||||||||||||||||||
Sbjct: 192564 tatgtatgtatgtatactcc 192545
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>emb|BX072572.8| Zebrafish DNA sequence from clone CH211-119A17, complete sequence
          Length = 173988

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 123   tataaatcgtatgtatgtatgtata 147
             |||||| ||||||||||||||||||
Sbjct: 62850 tataaaccgtatgtatgtatgtata 62874
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>gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, complete sequence
          Length = 184396

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 130   cgtatgtatgtatgtatactc 150
             |||||||||||||||||||||
Sbjct: 55285 cgtatgtatgtatgtatactc 55265
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>gb|AC177797.3| Mus musculus BAC clone RP24-558G11 from chromosome y, complete sequence
          Length = 174066

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   aatcgtatgtatgtatgtata 147
             |||||||||||||||||||||
Sbjct: 60464 aatcgtatgtatgtatgtata 60444
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>gb|AC067796.11| Homo sapiens chromosome 18, clone RP11-609K12, complete sequence
          Length = 201861

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 130    cgtatgtatgtatgtatactc 150
              |||||||||||||||||||||
Sbjct: 199302 cgtatgtatgtatgtatactc 199282
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>dbj|AK156919.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830107I15 product:unclassifiable, full
            insert sequence
          Length = 3926

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 132  tatgtatgtatgtatactcca 152
            |||||||||||||||||||||
Sbjct: 3539 tatgtatgtatgtatactcca 3519
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>emb|AL929507.37| Zebrafish DNA sequence from clone DKEY-7C18 in linkage group 20, complete
              sequence
          Length = 214404

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 123    tataaatcgtatgtatgtatgtata 147
              |||||| ||||||||||||||||||
Sbjct: 191022 tataaaccgtatgtatgtatgtata 190998
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>emb|AL831756.8| Mouse DNA sequence from clone RP23-300P20 on chromosome 4, complete
             sequence
          Length = 164883

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   cgtatgtatgtatgtatactc 150
             |||||||||||||||||||||
Sbjct: 84329 cgtatgtatgtatgtatactc 84349
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>gb|AC159008.2| Mus musculus BAC clone RP23-14E14 from chromosome 7, complete sequence
          Length = 239149

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   tatactccagtccatcttat 163
             ||||||||||||||||||||
Sbjct: 42267 tatactccagtccatcttat 42248
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>gb|AC147568.5| Mus musculus chromosome 7 clone RP23-15J23, complete sequence
          Length = 211115

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    gtatgtatgtatgtatactc 150
              ||||||||||||||||||||
Sbjct: 189275 gtatgtatgtatgtatactc 189256
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>gb|AC102931.10| Mus musculus chromosome 7, clone RP24-221B5, complete sequence
          Length = 164298

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gtatgtatgtatgtatactc 150
              ||||||||||||||||||||
Sbjct: 120878 gtatgtatgtatgtatactc 120897
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>gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 map 10, complete sequence
          Length = 194193

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gtatgtatgtatgtatactc 150
             ||||||||||||||||||||
Sbjct: 53020 gtatgtatgtatgtatactc 53001
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>gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 209654

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    aatcgtatgtatgtatgtat 146
              ||||||||||||||||||||
Sbjct: 142862 aatcgtatgtatgtatgtat 142843
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>gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, complete sequence
          Length = 196427

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tcgtatgtatgtatgtatac 148
              ||||||||||||||||||||
Sbjct: 114182 tcgtatgtatgtatgtatac 114201
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>gb|AC161289.2| Pan troglodytes BAC clone CH251-170B19 from chromosome 7, complete
             sequence
          Length = 151213

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   aatcgtatgtatgtatgtat 146
             ||||||||||||||||||||
Sbjct: 99612 aatcgtatgtatgtatgtat 99631
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>gb|AC183672.2| Pan troglodytes BAC clone CH251-546K4 from chromosome 7, complete
             sequence
          Length = 231124

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   aatcgtatgtatgtatgtat 146
             ||||||||||||||||||||
Sbjct: 40321 aatcgtatgtatgtatgtat 40302
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>gb|AC152938.3| Mus musculus BAC clone RP23-469O12 from chromosome 7, complete sequence
          Length = 183468

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    tatactccagtccatcttat 163
              ||||||||||||||||||||
Sbjct: 173875 tatactccagtccatcttat 173856
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>gb|AC163285.3| Mus musculus BAC clone RP23-379H2 from chromosome 16, complete sequence
          Length = 184951

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 236   caaatatatcaaggagggagagagcctc 263
             |||||| ||| |||||||||||||||||
Sbjct: 82581 caaatagatccaggagggagagagcctc 82608
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>gb|AC102125.13| Mus musculus chromosome 6, clone RP23-190E16, complete sequence
          Length = 219870

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gtatgtatgtatgtatactc 150
              ||||||||||||||||||||
Sbjct: 187048 gtatgtatgtatgtatactc 187067
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>gb|AC124481.2| Mus musculus BAC clone RP24-119I10 from chromosome 1, complete sequence
          Length = 182261

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    aatcgtatgtatgtatgtat 146
              ||||||||||||||||||||
Sbjct: 115058 aatcgtatgtatgtatgtat 115039
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>gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complete sequence
          Length = 175515

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gtatgtatgtatgtatactc 150
             ||||||||||||||||||||
Sbjct: 77251 gtatgtatgtatgtatactc 77232
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>gb|AC146024.3| Pan troglodytes BAC clone RP43-119C21 from 7, complete sequence
          Length = 139947

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   aatcgtatgtatgtatgtat 146
             ||||||||||||||||||||
Sbjct: 43653 aatcgtatgtatgtatgtat 43634
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>emb|AL606526.10| Human DNA sequence from clone RP13-534F18 on chromosome 1, complete
             sequence
          Length = 113654

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   ataaatcgtatgtatgtatgtata 147
             ||||||| ||||||||||||||||
Sbjct: 49444 ataaatcatatgtatgtatgtata 49421
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>gb|AC158575.3| Mus musculus chromosome 7, clone RP23-275H16, complete sequence
          Length = 221489

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    gtatgtatgtatgtatactc 150
              ||||||||||||||||||||
Sbjct: 142814 gtatgtatgtatgtatactc 142795
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>gb|AC084026.14| Homo sapiens chromosome 8, clone RP11-486M23, complete sequence
          Length = 185759

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   catgcatcatccttgtcttc 236
             ||||||||||||||||||||
Sbjct: 66349 catgcatcatccttgtcttc 66368
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>gb|AC183922.3| Pan troglodytes BAC clone CH251-344F10 from chromosome unknown, complete
              sequence
          Length = 146184

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    aatcgtatgtatgtatgtat 146
              ||||||||||||||||||||
Sbjct: 127879 aatcgtatgtatgtatgtat 127860
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>emb|CR352288.9| Zebrafish DNA sequence from clone CH211-123P18 in linkage group 16,
             complete sequence
          Length = 103979

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gtatgtatgtatgtatactc 150
             ||||||||||||||||||||
Sbjct: 65673 gtatgtatgtatgtatactc 65692
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>gb|DQ397629.1| Cenarchaeum symbiosum clone C01B12, complete sequence
          Length = 34772

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tcatccttgtcttcaaatat 242
             ||||||||||||||||||||
Sbjct: 34039 tcatccttgtcttcaaatat 34058
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>gb|DQ397558.1| Cenarchaeum symbiosum clone C19H10, complete sequence
          Length = 43787

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 223  tcatccttgtcttcaaatat 242
            ||||||||||||||||||||
Sbjct: 1525 tcatccttgtcttcaaatat 1544
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>gb|AC119416.15| Medicago truncatula clone mth2-31m16, complete sequence
          Length = 120889

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    tatgtatgtatgtatactcc 151
              ||||||||||||||||||||
Sbjct: 100243 tatgtatgtatgtatactcc 100262
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>gb|AC134836.6| Mus musculus BAC clone RP24-323I5 from chromosome 6, complete sequence
          Length = 150705

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gtatgtatgtatgtatactc 150
             ||||||||||||||||||||
Sbjct: 12426 gtatgtatgtatgtatactc 12445
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>gb|AC148988.5| Mus musculus BAC clone RP23-85B15 from chromosome 7, complete sequence
          Length = 154177

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tcgtatgtatgtatgtatac 148
              ||||||||||||||||||||
Sbjct: 132292 tcgtatgtatgtatgtatac 132273
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>dbj|AK049512.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430018J02
            product:unclassifiable, full insert sequence
          Length = 2357

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  tatgtatgtatgtatactcc 151
            ||||||||||||||||||||
Sbjct: 1004 tatgtatgtatgtatactcc 985
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 131      gtatgtatgtatgtatactc 150
                ||||||||||||||||||||
Sbjct: 28740794 gtatgtatgtatgtatactc 28740813
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 223      tcatccttgtcttcaaatatatcaaggagggagagagcct 262
                |||||||||||| |||| || ||||| |||||||| ||||
Sbjct: 20595926 tcatccttgtctgcaaagatgtcaagaagggagagcgcct 20595965
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>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0024F24
          Length = 172642

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 223   tcatccttgtcttcaaatatatcaaggagggagagagcct 262
             |||||||||||| |||| || ||||| |||||||| ||||
Sbjct: 57902 tcatccttgtctgcaaagatgtcaagaagggagagcgcct 57941
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>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1156H12
          Length = 159509

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 223    tcatccttgtcttcaaatatatcaaggagggagagagcct 262
              |||||||||||| |||| || ||||| |||||||| ||||
Sbjct: 119748 tcatccttgtctgcaaagatgtcaagaagggagagcgcct 119787
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>gb|BC044776.2| Mus musculus, clone IMAGE:5361456, mRNA
          Length = 2123

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tcgtatgtatgtatgtatac 148
            ||||||||||||||||||||
Sbjct: 1766 tcgtatgtatgtatgtatac 1747
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>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0459B01
          Length = 163087

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gtatgtatgtatgtatactc 150
             ||||||||||||||||||||
Sbjct: 57367 gtatgtatgtatgtatactc 57386
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>emb|AL773561.7| Mouse DNA sequence from clone RP23-71D9 on chromosome X, complete
              sequence
          Length = 174072

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    tatgtatgtatgtatactcc 151
              ||||||||||||||||||||
Sbjct: 127453 tatgtatgtatgtatactcc 127434
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>gb|AC154427.2| Mus musculus BAC clone RP24-200D20 from 16, complete sequence
          Length = 163687

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 236 caaatatatcaaggagggagagagcctc 263
           |||||| ||| |||||||||||||||||
Sbjct: 969 caaatagatccaggagggagagagcctc 996
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>emb|BX248499.12| Zebrafish DNA sequence from clone CH211-284A13 in linkage group 19,
             complete sequence
          Length = 148683

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gtatgtatgtatgtatactc 150
             ||||||||||||||||||||
Sbjct: 66401 gtatgtatgtatgtatactc 66420
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>gb|AC116882.9| Mus musculus chromosome 8, clone RP24-435G18, complete sequence
          Length = 187290

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gtatgtatgtatgtatactc 150
              ||||||||||||||||||||
Sbjct: 122588 gtatgtatgtatgtatactc 122607
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>emb|CT954231.1| Medicago truncatula chromosome 5 clone mth2-166e2, COMPLETE SEQUENCE
          Length = 122895

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   tatgtatgtatgtatactcc 151
             ||||||||||||||||||||
Sbjct: 22631 tatgtatgtatgtatactcc 22612
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>emb|AL928883.19| Mouse DNA sequence from clone RP23-60E18 on chromosome 2, complete
              sequence
          Length = 208470

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gtatgtatgtatgtatactc 150
              ||||||||||||||||||||
Sbjct: 103113 gtatgtatgtatgtatactc 103132
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>emb|AL845506.6| Mouse DNA sequence from clone RP23-401M24 on chromosome 2, complete
             sequence
          Length = 92280

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 126   aaatcgtatgtatgtatgtatactccag 153
             |||| |||||||||||||| ||||||||
Sbjct: 73600 aaatggtatgtatgtatgtgtactccag 73627
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>gb|L02306.1|RCCMETAL Ricinus communis metallothionein (RCMIT) mRNA, complete cds
          Length = 571

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 127 aatcgtatgtatgtatgtat 146
           ||||||||||||||||||||
Sbjct: 504 aatcgtatgtatgtatgtat 523
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>gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complete sequence
          Length = 204175

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   tatgtatgtatgtatactcc 151
             ||||||||||||||||||||
Sbjct: 27293 tatgtatgtatgtatactcc 27274
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>dbj|AP006704.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588c,
            complete sequence
          Length = 16978

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  aatcgtatgtatgtatgtat 146
            ||||||||||||||||||||
Sbjct: 4029 aatcgtatgtatgtatgtat 4048
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>gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosome 1, complete sequence
          Length = 206081

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    tatgtatgtatgtatactcc 151
              ||||||||||||||||||||
Sbjct: 157120 tatgtatgtatgtatactcc 157101
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>emb|AL626773.18| Mouse DNA sequence from clone RP23-273M9 on chromosome 4, complete
              sequence
          Length = 193852

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    gtatgtatgtatgtatactc 150
              ||||||||||||||||||||
Sbjct: 162012 gtatgtatgtatgtatactc 161993
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>emb|AL844547.9| Mouse DNA sequence from clone RP23-216B20 on chromosome 2, complete
              sequence
          Length = 210589

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    aatcgtatgtatgtatgtat 146
              ||||||||||||||||||||
Sbjct: 177590 aatcgtatgtatgtatgtat 177609


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,956,055
Number of Sequences: 3902068
Number of extensions: 2956055
Number of successful extensions: 280340
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 279503
Number of HSP's gapped (non-prelim): 837
length of query: 273
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 251
effective length of database: 17,147,199,772
effective search space: 4303947142772
effective search space used: 4303947142772
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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