| Clone Name | rbaal2o15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ491818.1|OSA491818 Oryza sativa (japonica cultivar-group) mRNA for putative sodium transporter (hkt6 gene) Length = 1679 Score = 285 bits (144), Expect = 1e-73 Identities = 447/548 (81%) Strand = Plus / Minus Query: 182 gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 241 |||| |||||||||||||| ||| |||| ||||||| || ||| ||||||||||||| Sbjct: 1655 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 1596 Query: 242 agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 301 | | |||||| |||||||| ||| |||||| | || ||||||| | || |||||||| | Sbjct: 1595 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 1536 Query: 302 atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 361 | || ||||||||||||||| || || || |||||||||||||||||||| || | | Sbjct: 1535 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 1476 Query: 362 acaagcccacgtttccatatgcacttacaacttcgaacagtatgctcaaaacattgaaat 421 | || ||||| |||||||||||||| || ||||| |||| |||||| ||||||||||||| Sbjct: 1475 agaaccccacatttccatatgcactgacgacttcaaacaatatgctgaaaacattgaaat 1416 Query: 422 taagtggatctgtggtcagtgcttctcgctcagtgatgcaaattagcatgacaaagatag 481 ||||||||||||| | || | || || || ||||||||||||||||| |||||||||| Sbjct: 1415 taagtggatctgtagccatcgagtcccgttctgtgatgcaaattagcattacaaagatag 1356 Query: 482 ccaaataagacaactgggacaagatccagtcctccaacaacccttttctgttgtatctct 541 |||||||||||| || || |||||||||| |||||| | ||||||||| |||| | ||| Sbjct: 1355 ccaaataagacatatgtgagaagatccagttctccaatagcccttttcttttgtttatct 1296 Query: 542 tctcgtccttagaataccgatcgtcgtaattgggtaaaaatgatgtgtaaccgggaagat 601 ||||| |||||||| | | | || | |||||||||| || |||||||| || |||| Sbjct: 1295 tctcggtcttagaatcctcaccatcatgtctgggtaaaaacgaagtgtaaccagggagat 1236 Query: 602 acatcatgacggtgtataggactattattgccgaagagatgctcgacagatccacaatag 661 ||||||||| |||||||||||||| ||||| ||||||| | | |||||||| || || Sbjct: 1235 acatcatgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaacag 1176 Query: 662 attcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtagc 721 ||||||| |||||||| |||||| || ||||| ||||| |||||||||||| ||| Sbjct: 1175 attcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatagt 1116 Query: 722 tgctcatt 729 |||||||| Sbjct: 1115 tgctcatt 1108
>ref|XM_464321.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1593 Score = 264 bits (133), Expect = 4e-67 Identities = 441/543 (81%), Gaps = 3/543 (0%) Strand = Plus / Minus Query: 187 tatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccgaagacc 246 |||||||||||||| ||| |||| ||||||| || ||| |||||||||||||| | | Sbjct: 1592 tatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccgaaaagc 1533 Query: 247 atgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccatatgaa 306 ||||| |||||||| ||| |||||| | || ||||||| | || |||||||| || || Sbjct: 1532 atgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgtacgag 1473 Query: 307 gcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattgacaag 366 ||||||||||||||| || || || |||||||||||||||||||| || | || || Sbjct: 1472 gcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccgagaac 1413 Query: 367 cccacgtttccatatgcacttacaacttcgaacagtatgctcaaaacattgaaattaagt 426 ||||| |||||||||||| || ||||| |||| |||||| |||||||||||||||||| Sbjct: 1412 cccacatttccatatgca---acgacttcaaacaatatgctgaaaacattgaaattaagt 1356 Query: 427 ggatctgtggtcagtgcttctcgctcagtgatgcaaattagcatgacaaagatagccaaa 486 |||||||| | || | || || || ||||||||||||||||| ||||||||||||||| Sbjct: 1355 ggatctgtagccatcgagtcccgttctgtgatgcaaattagcattacaaagatagccaaa 1296 Query: 487 taagacaactgggacaagatccagtcctccaacaacccttttctgttgtatctcttctcg 546 ||||||| || || |||||||||| |||||| | ||||||||| |||| | |||||||| Sbjct: 1295 taagacatatgtgagaagatccagttctccaatagcccttttcttttgtttatcttctcg 1236 Query: 547 tccttagaataccgatcgtcgtaattgggtaaaaatgatgtgtaaccgggaagatacatc 606 |||||||| | | | || | |||||||||| || |||||||| || ||||||||| Sbjct: 1235 gtcttagaatcctcaccatcatgtctgggtaaaaacgaagtgtaaccagggagatacatc 1176 Query: 607 atgacggtgtataggactattattgccgaagagatgctcgacagatccacaatagattca 666 |||| |||||||||||||| ||||| ||||||| | | |||||||| || ||||||| Sbjct: 1175 atgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaacagattca 1116 Query: 667 ccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtagctgctc 726 || |||||||| |||||| || ||||| ||||| |||||||||||| ||| ||||| Sbjct: 1115 cctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatagttgctc 1056 Query: 727 att 729 ||| Sbjct: 1055 att 1053
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 131 bits (66), Expect = 4e-27 Identities = 141/166 (84%) Strand = Plus / Minus Query: 391 acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 450 ||||| |||| |||||| |||||||||||||||||||||||||| | || | || || Sbjct: 4105327 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 4105268 Query: 451 tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 510 || ||||||||||||||||| |||||||||||||||||||||| || || ||||||||| Sbjct: 4105267 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 4105208 Query: 511 tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 556 | |||||| | ||||||||| |||| | |||||||| |||||||| Sbjct: 4105207 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 4105162 Score = 105 bits (53), Expect = 2e-19 Identities = 167/205 (81%) Strand = Plus / Minus Query: 182 gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 241 |||| |||||||||||||| ||| |||| ||||||| || ||| ||||||||||||| Sbjct: 4105630 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 4105571 Query: 242 agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 301 | | |||||| |||||||| ||| |||||| | || ||||||| | || |||||||| | Sbjct: 4105570 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 4105511 Query: 302 atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 361 | || ||||||||||||||| || || || |||||||||||||||||||| || | | Sbjct: 4105510 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 4105451 Query: 362 acaagcccacgtttccatatgcact 386 | || ||||| |||||||||||||| Sbjct: 4105450 agaaccccacatttccatatgcact 4105426 Score = 73.8 bits (37), Expect = 7e-10 Identities = 106/129 (82%) Strand = Plus / Minus Query: 601 tacatcatgacggtgtataggactattattgccgaagagatgctcgacagatccacaata 660 |||||||||| |||||||||||||| ||||| ||||||| | | |||||||| || | Sbjct: 4104619 tacatcatgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaaca 4104560 Query: 661 gattcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtag 720 |||||||| |||||||| |||||| || ||||| ||||| |||||||||||| ||| Sbjct: 4104559 gattcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatag 4104500 Query: 721 ctgctcatt 729 |||||||| Sbjct: 4104499 ttgctcatt 4104491
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 131 bits (66), Expect = 4e-27 Identities = 141/166 (84%) Strand = Plus / Minus Query: 391 acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 450 ||||| |||| |||||| |||||||||||||||||||||||||| | || | || || Sbjct: 15341 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 15282 Query: 451 tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 510 || ||||||||||||||||| |||||||||||||||||||||| || || ||||||||| Sbjct: 15281 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 15222 Query: 511 tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 556 | |||||| | ||||||||| |||| | |||||||| |||||||| Sbjct: 15221 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 15176 Score = 105 bits (53), Expect = 2e-19 Identities = 167/205 (81%) Strand = Plus / Minus Query: 182 gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 241 |||| |||||||||||||| ||| |||| ||||||| || ||| ||||||||||||| Sbjct: 15644 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 15585 Query: 242 agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 301 | | |||||| |||||||| ||| |||||| | || ||||||| | || |||||||| | Sbjct: 15584 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 15525 Query: 302 atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 361 | || ||||||||||||||| || || || |||||||||||||||||||| || | | Sbjct: 15524 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 15465 Query: 362 acaagcccacgtttccatatgcact 386 | || ||||| |||||||||||||| Sbjct: 15464 agaaccccacatttccatatgcact 15440 Score = 73.8 bits (37), Expect = 7e-10 Identities = 106/129 (82%) Strand = Plus / Minus Query: 601 tacatcatgacggtgtataggactattattgccgaagagatgctcgacagatccacaata 660 |||||||||| |||||||||||||| ||||| ||||||| | | |||||||| || | Sbjct: 14633 tacatcatgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaaca 14574 Query: 661 gattcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtag 720 |||||||| |||||||| |||||| || ||||| ||||| |||||||||||| ||| Sbjct: 14573 gattcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatag 14514 Query: 721 ctgctcatt 729 |||||||| Sbjct: 14513 ttgctcatt 14505
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 131 bits (66), Expect = 4e-27 Identities = 141/166 (84%) Strand = Plus / Minus Query: 391 acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 450 ||||| |||| |||||| |||||||||||||||||||||||||| | || | || || Sbjct: 151993 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 151934 Query: 451 tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 510 || ||||||||||||||||| |||||||||||||||||||||| || || ||||||||| Sbjct: 151933 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 151874 Query: 511 tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 556 | |||||| | ||||||||| |||| | |||||||| |||||||| Sbjct: 151873 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 151828 Score = 105 bits (53), Expect = 2e-19 Identities = 167/205 (81%) Strand = Plus / Minus Query: 182 gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 241 |||| |||||||||||||| ||| |||| ||||||| || ||| ||||||||||||| Sbjct: 152296 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 152237 Query: 242 agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 301 | | |||||| |||||||| ||| |||||| | || ||||||| | || |||||||| | Sbjct: 152236 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 152177 Query: 302 atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 361 | || ||||||||||||||| || || || |||||||||||||||||||| || | | Sbjct: 152176 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 152117 Query: 362 acaagcccacgtttccatatgcact 386 | || ||||| |||||||||||||| Sbjct: 152116 agaaccccacatttccatatgcact 152092 Score = 73.8 bits (37), Expect = 7e-10 Identities = 106/129 (82%) Strand = Plus / Minus Query: 601 tacatcatgacggtgtataggactattattgccgaagagatgctcgacagatccacaata 660 |||||||||| |||||||||||||| ||||| ||||||| | | |||||||| || | Sbjct: 151285 tacatcatgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaaca 151226 Query: 661 gattcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtag 720 |||||||| |||||||| |||||| || ||||| ||||| |||||||||||| ||| Sbjct: 151225 gattcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatag 151166 Query: 721 ctgctcatt 729 |||||||| Sbjct: 151165 ttgctcatt 151157
>emb|AJ491817.1|OSA491817 Oryza sativa (japonica cultivar-group) partial hkt6 gene for putative sodium transporter, exons 1-3 Length = 3157 Score = 131 bits (66), Expect = 4e-27 Identities = 141/166 (84%) Strand = Plus / Minus Query: 391 acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 450 ||||| |||| |||||| |||||||||||||||||||||||||| | || | || || Sbjct: 2365 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 2306 Query: 451 tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 510 || ||||||||||||||||| |||||||||||||||||||||| || || ||||||||| Sbjct: 2305 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 2246 Query: 511 tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 556 | |||||| | ||||||||| |||| | |||||||| |||||||| Sbjct: 2245 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 2200 Score = 105 bits (53), Expect = 2e-19 Identities = 167/205 (81%) Strand = Plus / Minus Query: 182 gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 241 |||| |||||||||||||| ||| |||| ||||||| || ||| ||||||||||||| Sbjct: 2668 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 2609 Query: 242 agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 301 | | |||||| |||||||| ||| |||||| | || ||||||| | || |||||||| | Sbjct: 2608 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 2549 Query: 302 atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 361 | || ||||||||||||||| || || || |||||||||||||||||||| || | | Sbjct: 2548 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 2489 Query: 362 acaagcccacgtttccatatgcact 386 | || ||||| |||||||||||||| Sbjct: 2488 agaaccccacatttccatatgcact 2464 Score = 73.8 bits (37), Expect = 7e-10 Identities = 106/129 (82%) Strand = Plus / Minus Query: 601 tacatcatgacggtgtataggactattattgccgaagagatgctcgacagatccacaata 660 |||||||||| |||||||||||||| ||||| ||||||| | | |||||||| || | Sbjct: 1657 tacatcatgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaaca 1598 Query: 661 gattcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtag 720 |||||||| |||||||| |||||| || ||||| ||||| |||||||||||| ||| Sbjct: 1597 gattcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatag 1538 Query: 721 ctgctcatt 729 |||||||| Sbjct: 1537 ttgctcatt 1529
>dbj|AK120889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029F13, full insert sequence Length = 2267 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 344 tgcagctgtaacccattgacaagcccacgtttccatatgcacttacaacttcga 397 |||| ||||| |||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 1427 tgcaactgtagcccattgagaaccccacatttccatatgcactgacaacttcga 1374
>dbj|AK109852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F09, full insert sequence Length = 1723 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 344 tgcagctgtaacccattgacaagcccacgtttccatatgcacttacaacttcga 397 |||| ||||| |||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 1429 tgcaactgtagcccattgagaaccccacatttccatatgcactgacaacttcga 1376
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 344 tgcagctgtaacccattgacaagcccacgtttccatatgcact 386 |||| ||||| |||||||| || ||||| |||||||||||||| Sbjct: 36451 tgcaactgtagcccattgagaaccccacatttccatatgcact 36493
>dbj|AB234305.1| Phragmites australis e-PhaHKT1 mRNA for high-affinity potassium transporter, complete cds Length = 1906 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 226 gccttaagcctcccgaagaccatgacaatgatcagaatcattttcccctcgttgctcca 284 ||||| |||||||| ||| |||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1644 gccttgagcctcccatagagcatgacaaagatcagcatcaacttcccttcgttgctcca 1586
>dbj|AB234304.1| Phragmites australis n-PhaHKT1 mRNA for high-affinity potassium transporter, complete cds Length = 1828 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 226 gccttaagcctcccgaagaccatgacaatgatcagaatcattttcccctcgttgctcca 284 ||||| |||||||| ||| |||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1566 gccttgagcctcccatagagcatgacaaagatcagcatcaacttcccttcgttgctcca 1508
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 344 tgcagctgtaacccattgacaagcccacgtttccatatgcact 386 |||| ||||| |||||||| || ||||| |||||||||||||| Sbjct: 30769029 tgcaactgtagcccattgagaaccccacatttccatatgcact 30769071
>gb|AF237672.1|AF237672 Arabidopsis thaliana sodium transporter (HKT1) mRNA, complete cds Length = 1521 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 367 cccacgtttccatatgcacttacaacttcga 397 |||||||||||||||||||| | |||||||| Sbjct: 1325 cccacgtttccatatgcactgataacttcga 1295
>emb|AJ491853.1|OSA491853 Oryza sativa (japonica cultivar-group) partial hkt7 gene for putative sodium transporter, exons 1-3 Length = 5400 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Minus Query: 344 tgcagctgtaacccattgacaagcccacgtttccatatgcact 386 |||| ||||| |||||||| || ||||| |||||||||||||| Sbjct: 4783 tgcaactgtagcccattgagaaccccacatttccatatgcact 4741
>gb|AF176035.1|AF176035 Eucalyptus camaldulensis potassium-sodium symporter HKT1 mRNA, complete cds Length = 1992 Score = 44.1 bits (22), Expect = 0.64 Identities = 55/66 (83%) Strand = Plus / Minus Query: 367 cccacgtttccatatgcacttacaacttcgaacagtatgctcaaaacattgaaattaagt 426 ||||| ||||||||||| ||||| ||||||| || ||| |||| || |||||||| || Sbjct: 1517 cccacatttccatatgcgcttaccacttcgaccacgatgttcaacacgttgaaattgagg 1458 Query: 427 ggatct 432 |||||| Sbjct: 1457 ggatct 1452
>dbj|AK121973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108I05, full insert sequence Length = 1381 Score = 44.1 bits (22), Expect = 0.64 Identities = 58/70 (82%) Strand = Plus / Plus Query: 660 agattcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggta 719 ||||||||| |||||||| |||||| || ||||| ||||| |||||||||||| || Sbjct: 151 agattcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgata 210 Query: 720 gctgctcatt 729 | |||||||| Sbjct: 211 gttgctcatt 220
>emb|Z81084.1|CEF46A9 Caenorhabditis elegans Cosmid F46A9, complete sequence Length = 29867 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cttccatgcttttcctccctt 215 ||||||||||||||||||||| Sbjct: 14297 cttccatgcttttcctccctt 14277
>gb|AF367366.1|AF367366 Mesembryanthemum crystallinum putative potassium-sodium transporter mRNA, complete cds Length = 1904 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 451 tcagtgatgcaaattagcatgacaaagatagccaaataaga 491 ||||||||||||| | ||| |||||||||||||| ||||| Sbjct: 1398 tcagtgatgcaaacaatcataacaaagatagccaagtaaga 1358 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,101,540 Number of Sequences: 3902068 Number of extensions: 6101540 Number of successful extensions: 116383 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 116256 Number of HSP's gapped (non-prelim): 109 length of query: 730 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 707 effective length of database: 17,143,297,704 effective search space: 12120311476728 effective search space used: 12120311476728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)