ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2o15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ491818.1|OSA491818 Oryza sativa (japonica cultivar-group) ... 285 1e-73
2ref|XM_464321.1| Oryza sativa (japonica cultivar-group), mRNA 264 4e-67
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 131 4e-27
4dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic D... 131 4e-27
5dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic D... 131 4e-27
6emb|AJ491817.1|OSA491817 Oryza sativa (japonica cultivar-group) ... 131 4e-27
7dbj|AK120889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
8dbj|AK109852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
9emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4,... 46 0.16
10dbj|AB234305.1| Phragmites australis e-PhaHKT1 mRNA for high-aff... 46 0.16
11dbj|AB234304.1| Phragmites australis n-PhaHKT1 mRNA for high-aff... 46 0.16
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
13gb|AF237672.1|AF237672 Arabidopsis thaliana sodium transporter (... 46 0.16
14emb|AJ491853.1|OSA491853 Oryza sativa (japonica cultivar-group) ... 46 0.16
15gb|AF176035.1|AF176035 Eucalyptus camaldulensis potassium-sodium... 44 0.64
16dbj|AK121973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.64
17emb|Z81084.1|CEF46A9 Caenorhabditis elegans Cosmid F46A9, comple... 42 2.5
18gb|AF367366.1|AF367366 Mesembryanthemum crystallinum putative po... 42 2.5

>emb|AJ491818.1|OSA491818 Oryza sativa (japonica cultivar-group) mRNA for putative sodium
            transporter (hkt6 gene)
          Length = 1679

 Score =  285 bits (144), Expect = 1e-73
 Identities = 447/548 (81%)
 Strand = Plus / Minus

                                                                        
Query: 182  gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 241
            |||| |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||
Sbjct: 1655 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 1596

                                                                        
Query: 242  agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 301
            | | |||||| |||||||| |||  |||||| | || ||||||| | || |||||||| |
Sbjct: 1595 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 1536

                                                                        
Query: 302  atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 361
            | || |||||||||||||||   || || || |||||||||||||||||||| || |  |
Sbjct: 1535 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 1476

                                                                        
Query: 362  acaagcccacgtttccatatgcacttacaacttcgaacagtatgctcaaaacattgaaat 421
            | || ||||| |||||||||||||| || ||||| |||| |||||| |||||||||||||
Sbjct: 1475 agaaccccacatttccatatgcactgacgacttcaaacaatatgctgaaaacattgaaat 1416

                                                                        
Query: 422  taagtggatctgtggtcagtgcttctcgctcagtgatgcaaattagcatgacaaagatag 481
            ||||||||||||| | ||  |  || || || ||||||||||||||||| ||||||||||
Sbjct: 1415 taagtggatctgtagccatcgagtcccgttctgtgatgcaaattagcattacaaagatag 1356

                                                                        
Query: 482  ccaaataagacaactgggacaagatccagtcctccaacaacccttttctgttgtatctct 541
            ||||||||||||  || || |||||||||| |||||| | ||||||||| |||| | |||
Sbjct: 1355 ccaaataagacatatgtgagaagatccagttctccaatagcccttttcttttgtttatct 1296

                                                                        
Query: 542  tctcgtccttagaataccgatcgtcgtaattgggtaaaaatgatgtgtaaccgggaagat 601
            |||||  |||||||| |  | | || |   |||||||||| || |||||||| || ||||
Sbjct: 1295 tctcggtcttagaatcctcaccatcatgtctgggtaaaaacgaagtgtaaccagggagat 1236

                                                                        
Query: 602  acatcatgacggtgtataggactattattgccgaagagatgctcgacagatccacaatag 661
            ||||||||| ||||||||||||||  ||||| ||||||| | | ||||||||   || ||
Sbjct: 1235 acatcatgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaacag 1176

                                                                        
Query: 662  attcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtagc 721
            ||||||| |||||||| ||||||   || ||||| |||||   |||||||||||| ||| 
Sbjct: 1175 attcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatagt 1116

                    
Query: 722  tgctcatt 729
            ||||||||
Sbjct: 1115 tgctcatt 1108



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>ref|XM_464321.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1593

 Score =  264 bits (133), Expect = 4e-67
 Identities = 441/543 (81%), Gaps = 3/543 (0%)
 Strand = Plus / Minus

                                                                        
Query: 187  tatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccgaagacc 246
            |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||| | |
Sbjct: 1592 tatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccgaaaagc 1533

                                                                        
Query: 247  atgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccatatgaa 306
            ||||| |||||||| |||  |||||| | || ||||||| | || |||||||| || || 
Sbjct: 1532 atgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgtacgag 1473

                                                                        
Query: 307  gcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattgacaag 366
            |||||||||||||||   || || || |||||||||||||||||||| || |  || || 
Sbjct: 1472 gcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccgagaac 1413

                                                                        
Query: 367  cccacgtttccatatgcacttacaacttcgaacagtatgctcaaaacattgaaattaagt 426
            ||||| ||||||||||||   || ||||| |||| |||||| ||||||||||||||||||
Sbjct: 1412 cccacatttccatatgca---acgacttcaaacaatatgctgaaaacattgaaattaagt 1356

                                                                        
Query: 427  ggatctgtggtcagtgcttctcgctcagtgatgcaaattagcatgacaaagatagccaaa 486
            |||||||| | ||  |  || || || ||||||||||||||||| |||||||||||||||
Sbjct: 1355 ggatctgtagccatcgagtcccgttctgtgatgcaaattagcattacaaagatagccaaa 1296

                                                                        
Query: 487  taagacaactgggacaagatccagtcctccaacaacccttttctgttgtatctcttctcg 546
            |||||||  || || |||||||||| |||||| | ||||||||| |||| | ||||||||
Sbjct: 1295 taagacatatgtgagaagatccagttctccaatagcccttttcttttgtttatcttctcg 1236

                                                                        
Query: 547  tccttagaataccgatcgtcgtaattgggtaaaaatgatgtgtaaccgggaagatacatc 606
              |||||||| |  | | || |   |||||||||| || |||||||| || |||||||||
Sbjct: 1235 gtcttagaatcctcaccatcatgtctgggtaaaaacgaagtgtaaccagggagatacatc 1176

                                                                        
Query: 607  atgacggtgtataggactattattgccgaagagatgctcgacagatccacaatagattca 666
            |||| ||||||||||||||  ||||| ||||||| | | ||||||||   || |||||||
Sbjct: 1175 atgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaacagattca 1116

                                                                        
Query: 667  ccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtagctgctc 726
            || |||||||| ||||||   || ||||| |||||   |||||||||||| ||| |||||
Sbjct: 1115 cctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatagttgctc 1056

               
Query: 727  att 729
            |||
Sbjct: 1055 att 1053



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  131 bits (66), Expect = 4e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                           
Query: 391     acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 450
               ||||| |||| |||||| |||||||||||||||||||||||||| | ||  |  || || 
Sbjct: 4105327 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 4105268

                                                                           
Query: 451     tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 510
               || ||||||||||||||||| ||||||||||||||||||||||  || || |||||||||
Sbjct: 4105267 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 4105208

                                                             
Query: 511     tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 556
               | |||||| | ||||||||| |||| | ||||||||  ||||||||
Sbjct: 4105207 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 4105162



 Score =  105 bits (53), Expect = 2e-19
 Identities = 167/205 (81%)
 Strand = Plus / Minus

                                                                           
Query: 182     gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 241
               |||| |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||
Sbjct: 4105630 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 4105571

                                                                           
Query: 242     agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 301
               | | |||||| |||||||| |||  |||||| | || ||||||| | || |||||||| |
Sbjct: 4105570 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 4105511

                                                                           
Query: 302     atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 361
               | || |||||||||||||||   || || || |||||||||||||||||||| || |  |
Sbjct: 4105510 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 4105451

                                        
Query: 362     acaagcccacgtttccatatgcact 386
               | || ||||| ||||||||||||||
Sbjct: 4105450 agaaccccacatttccatatgcact 4105426



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 106/129 (82%)
 Strand = Plus / Minus

                                                                           
Query: 601     tacatcatgacggtgtataggactattattgccgaagagatgctcgacagatccacaata 660
               |||||||||| ||||||||||||||  ||||| ||||||| | | ||||||||   || |
Sbjct: 4104619 tacatcatgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaaca 4104560

                                                                           
Query: 661     gattcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtag 720
               |||||||| |||||||| ||||||   || ||||| |||||   |||||||||||| |||
Sbjct: 4104559 gattcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatag 4104500

                        
Query: 721     ctgctcatt 729
                ||||||||
Sbjct: 4104499 ttgctcatt 4104491



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>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1077_E05
          Length = 116305

 Score =  131 bits (66), Expect = 4e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                         
Query: 391   acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 450
             ||||| |||| |||||| |||||||||||||||||||||||||| | ||  |  || || 
Sbjct: 15341 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 15282

                                                                         
Query: 451   tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 510
             || ||||||||||||||||| ||||||||||||||||||||||  || || |||||||||
Sbjct: 15281 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 15222

                                                           
Query: 511   tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 556
             | |||||| | ||||||||| |||| | ||||||||  ||||||||
Sbjct: 15221 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 15176



 Score =  105 bits (53), Expect = 2e-19
 Identities = 167/205 (81%)
 Strand = Plus / Minus

                                                                         
Query: 182   gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 241
             |||| |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||
Sbjct: 15644 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 15585

                                                                         
Query: 242   agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 301
             | | |||||| |||||||| |||  |||||| | || ||||||| | || |||||||| |
Sbjct: 15584 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 15525

                                                                         
Query: 302   atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 361
             | || |||||||||||||||   || || || |||||||||||||||||||| || |  |
Sbjct: 15524 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 15465

                                      
Query: 362   acaagcccacgtttccatatgcact 386
             | || ||||| ||||||||||||||
Sbjct: 15464 agaaccccacatttccatatgcact 15440



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 106/129 (82%)
 Strand = Plus / Minus

                                                                         
Query: 601   tacatcatgacggtgtataggactattattgccgaagagatgctcgacagatccacaata 660
             |||||||||| ||||||||||||||  ||||| ||||||| | | ||||||||   || |
Sbjct: 14633 tacatcatgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaaca 14574

                                                                         
Query: 661   gattcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtag 720
             |||||||| |||||||| ||||||   || ||||| |||||   |||||||||||| |||
Sbjct: 14573 gattcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatag 14514

                      
Query: 721   ctgctcatt 729
              ||||||||
Sbjct: 14513 ttgctcatt 14505



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>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0073A21
          Length = 170051

 Score =  131 bits (66), Expect = 4e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                          
Query: 391    acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 450
              ||||| |||| |||||| |||||||||||||||||||||||||| | ||  |  || || 
Sbjct: 151993 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 151934

                                                                          
Query: 451    tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 510
              || ||||||||||||||||| ||||||||||||||||||||||  || || |||||||||
Sbjct: 151933 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 151874

                                                            
Query: 511    tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 556
              | |||||| | ||||||||| |||| | ||||||||  ||||||||
Sbjct: 151873 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 151828



 Score =  105 bits (53), Expect = 2e-19
 Identities = 167/205 (81%)
 Strand = Plus / Minus

                                                                          
Query: 182    gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 241
              |||| |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||
Sbjct: 152296 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 152237

                                                                          
Query: 242    agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 301
              | | |||||| |||||||| |||  |||||| | || ||||||| | || |||||||| |
Sbjct: 152236 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 152177

                                                                          
Query: 302    atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 361
              | || |||||||||||||||   || || || |||||||||||||||||||| || |  |
Sbjct: 152176 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 152117

                                       
Query: 362    acaagcccacgtttccatatgcact 386
              | || ||||| ||||||||||||||
Sbjct: 152116 agaaccccacatttccatatgcact 152092



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 106/129 (82%)
 Strand = Plus / Minus

                                                                          
Query: 601    tacatcatgacggtgtataggactattattgccgaagagatgctcgacagatccacaata 660
              |||||||||| ||||||||||||||  ||||| ||||||| | | ||||||||   || |
Sbjct: 151285 tacatcatgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaaca 151226

                                                                          
Query: 661    gattcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtag 720
              |||||||| |||||||| ||||||   || ||||| |||||   |||||||||||| |||
Sbjct: 151225 gattcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatag 151166

                       
Query: 721    ctgctcatt 729
               ||||||||
Sbjct: 151165 ttgctcatt 151157



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>emb|AJ491817.1|OSA491817 Oryza sativa (japonica cultivar-group) partial hkt6 gene for putative
            sodium transporter, exons 1-3
          Length = 3157

 Score =  131 bits (66), Expect = 4e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                        
Query: 391  acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 450
            ||||| |||| |||||| |||||||||||||||||||||||||| | ||  |  || || 
Sbjct: 2365 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 2306

                                                                        
Query: 451  tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 510
            || ||||||||||||||||| ||||||||||||||||||||||  || || |||||||||
Sbjct: 2305 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 2246

                                                          
Query: 511  tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 556
            | |||||| | ||||||||| |||| | ||||||||  ||||||||
Sbjct: 2245 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 2200



 Score =  105 bits (53), Expect = 2e-19
 Identities = 167/205 (81%)
 Strand = Plus / Minus

                                                                        
Query: 182  gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 241
            |||| |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||
Sbjct: 2668 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 2609

                                                                        
Query: 242  agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 301
            | | |||||| |||||||| |||  |||||| | || ||||||| | || |||||||| |
Sbjct: 2608 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 2549

                                                                        
Query: 302  atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 361
            | || |||||||||||||||   || || || |||||||||||||||||||| || |  |
Sbjct: 2548 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 2489

                                     
Query: 362  acaagcccacgtttccatatgcact 386
            | || ||||| ||||||||||||||
Sbjct: 2488 agaaccccacatttccatatgcact 2464



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 106/129 (82%)
 Strand = Plus / Minus

                                                                        
Query: 601  tacatcatgacggtgtataggactattattgccgaagagatgctcgacagatccacaata 660
            |||||||||| ||||||||||||||  ||||| ||||||| | | ||||||||   || |
Sbjct: 1657 tacatcatgatggtgtataggactaggattgctgaagagaggtttgacagatctgtaaca 1598

                                                                        
Query: 661  gattcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggtag 720
            |||||||| |||||||| ||||||   || ||||| |||||   |||||||||||| |||
Sbjct: 1597 gattcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgatag 1538

                     
Query: 721  ctgctcatt 729
             ||||||||
Sbjct: 1537 ttgctcatt 1529



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>dbj|AK120889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029F13, full
            insert sequence
          Length = 2267

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 344  tgcagctgtaacccattgacaagcccacgtttccatatgcacttacaacttcga 397
            |||| ||||| |||||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 1427 tgcaactgtagcccattgagaaccccacatttccatatgcactgacaacttcga 1374



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>dbj|AK109852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F09, full
            insert sequence
          Length = 1723

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 344  tgcagctgtaacccattgacaagcccacgtttccatatgcacttacaacttcga 397
            |||| ||||| |||||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 1429 tgcaactgtagcccattgagaaccccacatttccatatgcactgacaacttcga 1376



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>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
             complete sequence
          Length = 179798

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 344   tgcagctgtaacccattgacaagcccacgtttccatatgcact 386
             |||| ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 36451 tgcaactgtagcccattgagaaccccacatttccatatgcact 36493



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>dbj|AB234305.1| Phragmites australis e-PhaHKT1 mRNA for high-affinity potassium
            transporter, complete cds
          Length = 1906

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226  gccttaagcctcccgaagaccatgacaatgatcagaatcattttcccctcgttgctcca 284
            ||||| ||||||||  ||| |||||||| |||||| ||||  ||||| |||||||||||
Sbjct: 1644 gccttgagcctcccatagagcatgacaaagatcagcatcaacttcccttcgttgctcca 1586



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>dbj|AB234304.1| Phragmites australis n-PhaHKT1 mRNA for high-affinity potassium
            transporter, complete cds
          Length = 1828

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226  gccttaagcctcccgaagaccatgacaatgatcagaatcattttcccctcgttgctcca 284
            ||||| ||||||||  ||| |||||||| |||||| ||||  ||||| |||||||||||
Sbjct: 1566 gccttgagcctcccatagagcatgacaaagatcagcatcaacttcccttcgttgctcca 1508



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                           
Query: 344      tgcagctgtaacccattgacaagcccacgtttccatatgcact 386
                |||| ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 30769029 tgcaactgtagcccattgagaaccccacatttccatatgcact 30769071



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>gb|AF237672.1|AF237672 Arabidopsis thaliana sodium transporter (HKT1) mRNA, complete cds
          Length = 1521

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 367  cccacgtttccatatgcacttacaacttcga 397
            |||||||||||||||||||| | ||||||||
Sbjct: 1325 cccacgtttccatatgcactgataacttcga 1295



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>emb|AJ491853.1|OSA491853 Oryza sativa (japonica cultivar-group) partial hkt7 gene for putative
            sodium transporter, exons 1-3
          Length = 5400

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 344  tgcagctgtaacccattgacaagcccacgtttccatatgcact 386
            |||| ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 4783 tgcaactgtagcccattgagaaccccacatttccatatgcact 4741



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>gb|AF176035.1|AF176035 Eucalyptus camaldulensis potassium-sodium symporter HKT1 mRNA,
            complete cds
          Length = 1992

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 367  cccacgtttccatatgcacttacaacttcgaacagtatgctcaaaacattgaaattaagt 426
            ||||| ||||||||||| ||||| ||||||| ||  ||| |||| || |||||||| || 
Sbjct: 1517 cccacatttccatatgcgcttaccacttcgaccacgatgttcaacacgttgaaattgagg 1458

                  
Query: 427  ggatct 432
            ||||||
Sbjct: 1457 ggatct 1452



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>dbj|AK121973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108I05, full
           insert sequence
          Length = 1381

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 660 agattcaccagcatgcctcgcattggttgattgaaaaagagcacctactatcttttggta 719
           ||||||||| |||||||| ||||||   || ||||| |||||   |||||||||||| ||
Sbjct: 151 agattcacctgcatgcctagcattgaccgactgaaatagagcggatactatcttttgata 210

                     
Query: 720 gctgctcatt 729
           | ||||||||
Sbjct: 211 gttgctcatt 220



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>emb|Z81084.1|CEF46A9 Caenorhabditis elegans Cosmid F46A9, complete sequence
          Length = 29867

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 195   cttccatgcttttcctccctt 215
             |||||||||||||||||||||
Sbjct: 14297 cttccatgcttttcctccctt 14277



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>gb|AF367366.1|AF367366 Mesembryanthemum crystallinum putative potassium-sodium transporter
            mRNA, complete cds
          Length = 1904

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 451  tcagtgatgcaaattagcatgacaaagatagccaaataaga 491
            |||||||||||||  | ||| |||||||||||||| |||||
Sbjct: 1398 tcagtgatgcaaacaatcataacaaagatagccaagtaaga 1358


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,101,540
Number of Sequences: 3902068
Number of extensions: 6101540
Number of successful extensions: 116383
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 116256
Number of HSP's gapped (non-prelim): 109
length of query: 730
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 707
effective length of database: 17,143,297,704
effective search space: 12120311476728
effective search space used: 12120311476728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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