>YI0B_SCHPO (Q9URZ4) Putative amino-acid permease C869.11|
          Length = 580

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = -3

Query: 414 ACFTSIFLCKIRGFIIINIFRSLIYAVFRFNLLS*KIVHSFGFLIFML 271
           A + SIFL  I   II+N+F    Y    F L + K+V +FGF+I  +
Sbjct: 190 AAWISIFLVVI---IIVNLFGVRAYGEVEFILSTVKVVATFGFIILAI 234

>SYC_BORBU (O51545) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 480

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -1

Query: 302 YIPLDFSFLCLHSSNKNWMDFVLTNL 225
           + PLDF +LCL S  +N + F L NL
Sbjct: 297 FSPLDFRYLCLTSHYRNQLKFSLDNL 322

>COAT_TYLCA (P36278) Coat protein (CP)|
          Length = 256

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
 Frame = +1

Query: 358 NIYDNESSNLTKKNGSEAGNQLTERCSTFTSQN---------ISTFYNLILQ*AFCTYQH 510
           N+YDNE S  T KN    G Q+ ++ S   +           I+ FY +      CTY H
Sbjct: 157 NMYDNEPSTATVKNDMRDGFQVIKKWSATVTGGQYASKEQAIINRFYKIY---NHCTYNH 213

Query: 511 EHKSE 525
           +  ++
Sbjct: 214 QEAAK 218


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,756,470
Number of Sequences: 219361
Number of extensions: 1733328
Number of successful extensions: 3586
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3586
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)