>YP65_CAEEL (Q09214) Hypothetical protein B0495.5|
          Length = 729

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 47/157 (29%), Positives = 68/157 (43%)
 Frame = -1

Query: 716  GAEPSGNSMAAINMVRLSSILDAAKSEGYKRNVEHLLAVFETRLKELGIALPLMCCAADM 537
            GAEP+  S+A+ N++RL  IL+    E Y+            RL  + IALP M  A   
Sbjct: 585  GAEPTATSIASNNLLRLYDILE---KEEYREKANQCFRGASERLNTVPIALPKMAVALHR 641

Query: 536  LTVPSRKQVVLVGDKASPEFQDMVVAAFLSYDPNRTVIQIDASKMEEMAFWESNNANIAQ 357
              + S    VLVGD  S    +        +  N +V+ I +         E  +A+   
Sbjct: 642  WQIGSTT-FVLVGDPKSELLSETRSRLNQKFLNNLSVVHIQSE--------EDLSASGPS 692

Query: 356  MARSSPSGKPAVAHVCQEFKCSPPVTSPGALRELLNK 246
                +   KPAV ++C+ F C  PV +   L EL NK
Sbjct: 693  HKAMAEGPKPAV-YMCKGFVCDRPVKAIQELEELFNK 728

>YYAL_BACSU (P37512) Hypothetical protein yyaL|
          Length = 689

 Score = 38.5 bits (88), Expect = 0.021
 Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
 Frame = -1

Query: 716 GAEPSGNSMAAINMVRLSSIL-DAAKSEGYKRNVEHLLAVFETRLKELGIALPLMCCAAD 540
           GA PSGNS+AA+ ++RL  +  D +  E      E + +VF+  ++           +  
Sbjct: 542 GAVPSGNSVAAVQLLRLGQVTGDLSLIE----KAETMFSVFKPDIEAYPSGHAFFMQSVL 597

Query: 539 MLTVPSRKQVVLVGDKASPEFQDMVVAAFLSYDPNRTVIQIDASKM-EEMAFWESNNANI 363
              +P +K++V+ G    P  + ++     ++ PN +++  +  +  +++A + ++   I
Sbjct: 598 RHLMP-KKEIVIFGSADDPARKQIIAELQKAFKPNDSILVAEQPEQCKDIAPFAADYRII 656

Query: 362 AQMARSSPSGKPAVAHVCQEFKCSPPVTS 276
                    GK  V ++C+ F C  P T+
Sbjct: 657 --------DGKTTV-YICENFACQQPTTN 676

>DRTS_SOYBN (P51820) Bifunctional dihydrofolate reductase-thymidylate synthase|
           (DHFR-TS) [Includes: Dihydrofolate reductase (EC
           1.5.1.3); Thymidylate synthase (EC 2.1.1.45)]
          Length = 530

 Score = 33.9 bits (76), Expect = 0.51
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
 Frame = +3

Query: 363 DVRVVALPECHLFHFASIYLDHGSVWVI*QECSNDHVL---------KFRRCFIPHQHYL 515
           D++++ALP CH+  FA  Y+ HG +     + S D  L             C I H   L
Sbjct: 403 DLKLMALPPCHM--FAQFYVAHGELSCQMYQRSADMGLGIPFNIASYALLTCMIAHVCDL 460

Query: 516 LPRRDSEHVCCAAHQWQRYAKFFQSSLKDRQEMF 617
           +P  D  HV   AH ++ + +  Q  L ++ + F
Sbjct: 461 IP-GDFIHVIGDAHIYRNHVRPLQEQLHNQPKPF 493

>ERFB_SCHPO (O74384) Palmitoyltransferase erf2 (EC 2.3.1.-) (DHHC cysteine-rich|
           domain-containing protein erf2) (Ras protein
           acyltransferase)
          Length = 350

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +3

Query: 312 HMCHRWLP*WAAPCHLCDVRVVALPECHLFHFASIYLDHGSVWV 443
           H CH + P  A+ CHLCD  V              YLDH  +W+
Sbjct: 185 HTCHLYRPPRASHCHLCDNCVE-------------YLDHHCIWL 215

>TEP1_HUMAN (Q99973) Telomerase protein component 1 (Telomerase-associated|
            protein 1) (Telomerase protein 1) (p240) (p80 telomerase
            homolog)
          Length = 2627

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = -1

Query: 494  KASPEFQDMVVAAFLSYDPNRTVIQIDASKMEEMAFW--ESNNANIAQMARSSPSGKPAV 321
            K S EF++ +       +P+RT+I I  +K E  + +   S++  +  +A+ SP G+   
Sbjct: 2442 KESGEFEERLNFDINLENPSRTLISITQAKPESESSFLCASSDGILWNLAKCSPEGEWTT 2501

Query: 320  AHVCQEFKCSPPVTSPG 270
             ++ Q+   +P   +PG
Sbjct: 2502 GNMWQKKANTPETQTPG 2518

>DRTS2_ARATH (Q05763) Bifunctional dihydrofolate reductase-thymidylate synthase|
           2 (DHFR-TS 2) [Includes: Dihydrofolate reductase (EC
           1.5.1.3); Thymidylate synthase (EC 2.1.1.45)]
          Length = 518

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
 Frame = +3

Query: 363 DVRVVALPECHLFHFASIYLDHGSVWVI*QECSNDHVL---------KFRRCFIPHQHYL 515
           D++++ALP CH+  FA  Y+ +G +     + S D  L             C + H   L
Sbjct: 391 DLKLMALPPCHM--FAQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTCILAHVCDL 448

Query: 516 LPRRDSEHVCCAAHQWQRYAKFFQSSLKDRQEMFNI 623
           +P  D  HV   AH ++ + +  Q  L++  + F +
Sbjct: 449 VP-GDFIHVIGDAHVYKNHVRPLQEQLENPPKPFPV 483

>NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 protein) (Fusion|
           2 protein)
          Length = 314

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 712 QSPLETQWRRSTWSGCPVFWMLQNL 638
           QSPLET +R     GCP+FWM +++
Sbjct: 292 QSPLETCYR--DLKGCPIFWMEKDI 314

>MBB1A_HUMAN (Q9BQG0) Myb-binding protein 1A|
          Length = 1328

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +2

Query: 425 SRFCLGHMTRMQQRPCLEIPEMLYPPPALPASSTGQ*ACLLRSTSVATLCQVLSV*SQRP 604
           +RFCL H   + ++P  +IPE  + P + P  +  + A    S++  +L Q LS   ++ 
Sbjct: 476 ARFCLFHSFFVTKKPTSQIPETKH-PFSFPLENQAREAV---SSAFFSLLQTLSTQFKQA 531

Query: 605 PGDVQ 619
           PG  Q
Sbjct: 532 PGQTQ 536

>HIS4_DEIRA (Q9RRJ5) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 238

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
 Frame = -1

Query: 656 LDAAKSEGYKRNVEHLLAVFETRLKELGIALPL------MCCAADMLTVPSRKQVVLVGD 495
           LDAA   G  R      AV    ++ELG+ + +         A  +LT    + V+    
Sbjct: 57  LDAATGRGENR------AVIAEIVRELGVPVEVGGGVRDRAAAQSLLTAGVARVVIGTAA 110

Query: 494 KASPEFQDMVVAAFLSYDPNRTVIQIDASKME 399
             +PE   +V      Y P R V+ +DA  +E
Sbjct: 111 VRNPE---LVAELIAEYGPERVVVSLDARGLE 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,193,578
Number of Sequences: 219361
Number of extensions: 2212865
Number of successful extensions: 5837
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5835
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7309604013
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)