ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal2o05 |
|---|---|
| Clone Library Name | barley_pub |
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 56.6 bits (135), Expect = 5e-08 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%) Frame = -3 Query: 558 DIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMN---ELVNASXTI----CGHIFCXK 400 D+ T +TP A E + SCP+CM+ E+V I CGH+FC + Sbjct: 105 DVYVTTHTP---RNARDEGATGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQ 161 Query: 399 CIKASIQAXKKCPTCRRKLTISNFXRVYL 313 C++ S++ CPTCR+K+ + +Y+ Sbjct: 162 CLRDSLKNANTCPTCRKKINHKRYHPIYI 190
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 55.5 bits (132), Expect = 1e-07 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%) Frame = -3 Query: 558 DIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMN---ELVNASXTI----CGHIFCXK 400 D+ T +TP ++ P T SCP+CM+ E+V I CGH+FC + Sbjct: 109 DVYVTTHTPRSTKDEGTTGLR--PSGT-VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQ 165 Query: 399 CIKASIQAXKKCPTCRRKLTISNFXRVYL 313 C++ S++ CPTCR+K+ + +Y+ Sbjct: 166 CLRDSLKNANTCPTCRKKINHKRYHPIYI 194
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 55.1 bits (131), Expect = 1e-07 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 10/92 (10%) Frame = -3 Query: 558 DIPXTNNTPPKVAQ---AAPEPVKEIPKETKFSCPVCMN---ELVNASXTI----CGHIF 409 D+ T +TP P P + SCP+CM+ E+V I CGH+F Sbjct: 109 DVYVTTHTPRSTKDDGATGPRPSGTV------SCPICMDGYSEIVQNGRLIVSTECGHVF 162 Query: 408 CXKCIKASIQAXKKCPTCRRKLTISNFXRVYL 313 C +C++ S++ CPTCR+K+ + +Y+ Sbjct: 163 CSQCLRDSLKNANTCPTCRKKINHKRYHPIYI 194
>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)| Length = 347 Score = 53.1 bits (126), Expect = 6e-07 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -3 Query: 534 PPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKKCPT 358 PP + P ++E +E + +CP+C+ E+ NA C H FC CI ++Q K CP Sbjct: 142 PPPLPPPLPPRLREDAEEQETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPM 201 Query: 357 CRR 349 C R Sbjct: 202 CGR 204
>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)| Length = 347 Score = 53.1 bits (126), Expect = 6e-07 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -3 Query: 534 PPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKKCPT 358 PP + P ++E +E + +CP+C+ E+ NA C H FC CI ++Q K CP Sbjct: 142 PPPLPPPLPPRLREEAEEQESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPM 201 Query: 357 CRR 349 C R Sbjct: 202 CGR 204
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 52.8 bits (125), Expect = 7e-07 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%) Frame = -3 Query: 552 PXTNNTPPKVAQAAPEPVKEIPKETK---FSCPVCMNELVNASXTICGHIFCXKCIKASI 382 P T N ++ + P + +P + + C +C++ N S T CGHIFC CI +++ Sbjct: 177 PSTTNA--EIEKEEPSKKQVVPSSQRLADYKCVICLDSPENLSCTPCGHIFCNFCILSAL 234 Query: 381 ---QAXKKCPTCRRKL 343 A +KCP CRRK+ Sbjct: 235 GTTAATQKCPVCRRKV 250
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 51.6 bits (122), Expect = 2e-06 Identities = 21/57 (36%), Positives = 29/57 (50%) Frame = -3 Query: 486 KETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVY 316 K F CP+C + + A T CGH FC KCI S++ +CP C + N +Y Sbjct: 130 KSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKC--NYVVDNIDHLY 184
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 51.6 bits (122), Expect = 2e-06 Identities = 21/57 (36%), Positives = 29/57 (50%) Frame = -3 Query: 486 KETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVY 316 K F CP+C + + A T CGH FC KCI S++ +CP C + N +Y Sbjct: 132 KSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKC--NYVVDNIDHLY 186
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 50.4 bits (119), Expect = 4e-06 Identities = 22/54 (40%), Positives = 28/54 (51%) Frame = -3 Query: 474 FSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVYL 313 F CP+CM + +A T CGH FC CI ++ CP C LT SN +L Sbjct: 45 FLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFL 98
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 49.7 bits (117), Expect = 6e-06 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 474 FSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK-CPTCRRKLTISN 331 F CP+C++ N T C HIFC CI ++Q K CP CR LT S+ Sbjct: 633 FDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSD 681
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 49.7 bits (117), Expect = 6e-06 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%) Frame = -3 Query: 567 NIVDIPXTNNTPPKVAQAAP--EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCI 394 NI+ TNNT + + E ++ I K C VC + + T+CGH+FC KC Sbjct: 599 NILQKYKTNNTNSLLQEDEQQLEALRSIAK-----CSVCSKNWKDTAITVCGHVFCSKCT 653 Query: 393 KASIQA-XKKCPTCRRKLTISNFXRVYL 313 + + A ++CP+C R + ++ ++L Sbjct: 654 QERLAARLRRCPSCNRGFSANDLLSIHL 681
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 48.9 bits (115), Expect = 1e-05 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Frame = -3 Query: 531 PKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTC 355 PK + E +K+ + + +CP C +A T C H+FC +C+K +KCP C Sbjct: 903 PKCDEILMEEIKDY--KARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKC 960 Query: 354 RRKLTISNFXRVYL 313 ++F R+Y+ Sbjct: 961 NAAFGANDFHRIYI 974
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 48.9 bits (115), Expect = 1e-05 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 507 EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISN 331 E +KE + + +CP C +A T C H+FC +C++ +A +KCP C + Sbjct: 938 EEIKEY--KARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHD 995 Query: 330 FXRVYL 313 F RVY+ Sbjct: 996 FHRVYI 1001
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 48.9 bits (115), Expect = 1e-05 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 507 EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISN 331 E +KE + + +CP C +A T C H+FC +C++ +A +KCP C + Sbjct: 937 EEIKEY--KARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHD 994 Query: 330 FXRVYL 313 F RVY+ Sbjct: 995 FHRVYI 1000
>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 973 Score = 48.9 bits (115), Expect = 1e-05 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Frame = -3 Query: 531 PKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTC 355 PK + E +K+ + + +CP C +A T C H+FC +C+K +KCP C Sbjct: 901 PKCDEILMEEIKDY--KARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKC 958 Query: 354 RRKLTISNFXRVYL 313 ++F R+Y+ Sbjct: 959 NAAFGANDFHRIYI 972
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 48.5 bits (114), Expect = 1e-05 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 507 EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISN 331 E +KE + + +CP C +A T C H+FC +C++ +A +KCP C + Sbjct: 937 EEIKEY--KARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHD 994 Query: 330 FXRVYL 313 F R+Y+ Sbjct: 995 FHRIYI 1000
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 48.5 bits (114), Expect = 1e-05 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 507 EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISN 331 E +KE + + +CP C +A T C H+FC +C++ +A +KCP C + Sbjct: 937 EEIKEY--KARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHD 994 Query: 330 FXRVYL 313 F R+Y+ Sbjct: 995 FHRIYI 1000
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 48.5 bits (114), Expect = 1e-05 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 507 EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISN 331 E +KE + + +CP C +A T C H+FC +C++ +A +KCP C + Sbjct: 937 EEIKEY--KARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHD 994 Query: 330 FXRVYL 313 F R+Y+ Sbjct: 995 FHRIYI 1000
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 48.5 bits (114), Expect = 1e-05 Identities = 20/46 (43%), Positives = 23/46 (50%) Frame = -3 Query: 489 PKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCR 352 P ET C VC + N T C H FC CI+ + KCPTCR Sbjct: 23 PFETSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPTCR 68
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 47.8 bits (112), Expect = 2e-05 Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -3 Query: 489 PKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQ-AXKKCP 361 P E+K+ CP+C+ L A T CGH FC CI SI+ A KCP Sbjct: 63 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 106
>PEX10_PICAN (Q00940) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PER8) Length = 295 Score = 47.8 bits (112), Expect = 2e-05 Identities = 19/67 (28%), Positives = 40/67 (59%) Frame = -3 Query: 543 NNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKC 364 + T + A P+ + +P+ ++ +C +C++ + + S CGH+FC KC+ ++ ++C Sbjct: 221 DQTSDVIDLADPKVLPYLPEASR-TCMLCLSPMKDPSCGECGHVFCWKCVLDWVKERQEC 279 Query: 363 PTCRRKL 343 P CR K+ Sbjct: 280 PLCRAKM 286
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 47.8 bits (112), Expect = 2e-05 Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -3 Query: 489 PKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQ-AXKKCP 361 P E+K+ CP+C+ L A T CGH FC CI SI+ A KCP Sbjct: 63 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 106
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 47.4 bits (111), Expect = 3e-05 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -3 Query: 543 NNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-K 370 + TP + V ++ CP+C++ L N T C H FC CI ++++ K Sbjct: 22 HRTPQAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 81 Query: 369 KCPTCRRKL 343 +CPTCR+KL Sbjct: 82 ECPTCRKKL 90
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 47.4 bits (111), Expect = 3e-05 Identities = 29/90 (32%), Positives = 39/90 (43%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVYLPMAXN*NL 289 CP+CM + +A T CGH FC CI ++ CP C + LT + +L Sbjct: 52 CPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKT 111 Query: 288 SSHSWSIXADGX*LKPIQPFLEHXSRGSCD 199 S+ S A P+ F E RG CD Sbjct: 112 SARHVSKTA-----SPLDQFREALQRG-CD 135
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 47.0 bits (110), Expect = 4e-05 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = -3 Query: 531 PKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK-KCPTC 355 P+ + +P E+P T F C VC+ L T CGH+FC CI S++ K CP C Sbjct: 18 PRALERRGDP--ELPV-TSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYC 74 Query: 354 RRKL 343 R L Sbjct: 75 RAYL 78
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 47.0 bits (110), Expect = 4e-05 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%) Frame = -3 Query: 492 IPKETKFSCPVCMNELVNASXTICGHIFCXKCI-----KASIQAXKKCPTCRR 349 + K+ + CP+C++ L A T C H+FC C+ KAS+ CP CR+ Sbjct: 4 LDKDNQDICPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRK 56
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 47.0 bits (110), Expect = 4e-05 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = -3 Query: 531 PKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTC 355 P + E +K+ + + +CP C +A T C H+FC +C+K +KCP C Sbjct: 912 PNCDEILMEEIKDY--KARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKC 969 Query: 354 RRKLTISNFXRVYL 313 ++F R+Y+ Sbjct: 970 NAAFGANDFHRIYI 983
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)| Length = 232 Score = 47.0 bits (110), Expect = 4e-05 Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK--CPTCRRKL 343 T F C VC+ L T CGH+FC CI SI+ K CP CR L Sbjct: 32 TSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYCRAYL 79
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 46.2 bits (108), Expect = 7e-05 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK-KCPTCRRKL 343 T F C VC+ L T CGH+FC CI S++ K CP CR L Sbjct: 32 TSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYL 78
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 46.2 bits (108), Expect = 7e-05 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRK 346 C +C+ E + + T CGH+FC +CI A + +CP CR K Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCREK 313
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 46.2 bits (108), Expect = 7e-05 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRK 346 C +C+ E + + T CGH+FC +CI A + +CP CR K Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCREK 313
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 46.2 bits (108), Expect = 7e-05 Identities = 23/83 (27%), Positives = 39/83 (46%) Frame = -3 Query: 561 VDIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASI 382 + +P T + P + + ++ ++ C +C + L + T CGH FC CI+ + Sbjct: 3 LSVPETISNPRDFLHTSVPQLTDL--DSLLRCHICKDFLKASVLTPCGHSFCSICIRKYL 60 Query: 381 QAXKKCPTCRRKLTISNFXRVYL 313 Q KCP C LT S + +L Sbjct: 61 QKESKCPLCLSDLTESMLQKEFL 83
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic| region Length = 274 Score = 45.8 bits (107), Expect = 9e-05 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 11/100 (11%) Frame = -3 Query: 579 DLVXNIVDIPXTNNTPPKVAQAA-PEPVKEIPKE----TKFSCPVCMNELVNASXTICGH 415 DL + +D+ +++ E KE PKE + CP+C A T+CGH Sbjct: 164 DLTADAIDLDAEEQQVLQISDDDFQEETKEAPKEYGAAKDYRCPICFEPPETALMTLCGH 223 Query: 414 IFCXKCIKASIQAXK------KCPTCRRKLTISNFXRVYL 313 +FC C+ + + + C CR K+ + + + L Sbjct: 224 VFCCPCLFQMVNSSRTCRQFGHCALCRSKVYLKDVRLIIL 263
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 45.4 bits (106), Expect = 1e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 44 SELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 45.4 bits (106), Expect = 1e-04 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASI-QAXKKCPTCRR 349 C +C N N + CGH+FC +C+ I +KCPTC R Sbjct: 651 CTICRNNFKNTALKTCGHLFCNQCVDDRISNRMRKCPTCSR 691
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 45.4 bits (106), Expect = 1e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 44 SELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 45.4 bits (106), Expect = 1e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 44 SELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 45.4 bits (106), Expect = 1e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 44 SELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 45.4 bits (106), Expect = 1e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 44 SELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = -3 Query: 546 TNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XK 370 TNNT + Q ++ + K C VC + + T+CGH+FC C + + A + Sbjct: 616 TNNTS-SILQEDERQLEALRSIAK--CSVCSKNWKDTAITVCGHVFCLGCTQERLAARLR 672 Query: 369 KCPTCRRKLTISNFXRVYL 313 +CPTC + + ++ ++L Sbjct: 673 RCPTCNKGFSANDLLSIHL 691
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 45.4 bits (106), Expect = 1e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 15 SELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 62
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 45.4 bits (106), Expect = 1e-04 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = -3 Query: 489 PKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCR 352 P E+ C VC + N T C H FC CI+ + KCP CR Sbjct: 23 PLESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACR 68
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12| Length = 284 Score = 45.4 bits (106), Expect = 1e-04 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 6/67 (8%) Frame = -3 Query: 513 APEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIK---ASIQAXKK---CPTCR 352 A + +K + +E +CPVC+N +V CGH FC CI SI+ KK CP CR Sbjct: 2 ASQFMKNLKEEV--TCPVCLNLMVKPVSADCGHTFCQGCITLYFESIKCDKKVFICPVCR 59 Query: 351 RKLTISN 331 SN Sbjct: 60 ISYQFSN 66
>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin| A-sensitivity protein 1) Length = 700 Score = 45.4 bits (106), Expect = 1e-04 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFXRVYL 313 C +C N + CGH+FC C K + A +KCPTC + + ++ V+L Sbjct: 648 CSLCSKNWKNMAIKTCGHVFCENCCKERLAARMRKCPTCNKAFSSNDLLTVHL 700
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 45.1 bits (105), Expect = 2e-04 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -3 Query: 492 IPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCR 352 +P E F C VC + + T C H FC CI+ + KCP CR Sbjct: 26 MPVEQAFRCHVCKDFYDSPMLTSCNHTFCSLCIRRCLSVDSKCPLCR 72
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 47 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 94
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 47 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 94
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 47 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 94
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 47 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 94
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L N T C H FC CI ++++ K+CPTCR+KL Sbjct: 47 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 94
>AMFR2_HUMAN (Q9UKV5) Autocrine motility factor receptor, isoform 2 (EC 6.3.2.-)| (AMF receptor) (gp78) Length = 643 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = -3 Query: 540 NTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCP 361 N + A A PE + C +C + + A CGH+F C+++ ++ CP Sbjct: 321 NMEARFAVATPEELAV----NNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCP 376 Query: 360 TCRRKLTISNFXRV 319 TCR L I++ RV Sbjct: 377 TCRMSLNIADNNRV 390
>BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator| Length = 450 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK--CPTCRRK 346 ++FSC C + LVN + CGH FC C+ + KK CP CR K Sbjct: 30 SEFSCHCCYDTLVNPTTLNCGHSFCRHCLALWWMSSKKTECPECREK 76
>BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator| Length = 450 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK--CPTCRRK 346 ++FSC C + LVN + CGH FC C+ + KK CP CR K Sbjct: 30 SEFSCHCCYDTLVNPTTLNCGHSFCRHCLALWWMSSKKTECPECREK 76
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/52 (38%), Positives = 25/52 (48%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVYL 313 C +C + L N T CGH FC CI+ + KCP C +L S YL Sbjct: 27 CHICKDFLKNPVLTPCGHTFCSLCIRGYLSNEPKCPLCLHELRESMLRSEYL 78
>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 693 Score = 45.1 bits (105), Expect = 2e-04 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFXRVYL 313 C +C N + CGH+FC C K + A +KCPTC + + ++ V+L Sbjct: 641 CSLCSKNWKNMAIRTCGHVFCEDCCKERLAARMRKCPTCNKPFSSNDLLMVHL 693
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -3 Query: 522 AQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK-CPTCRRK 346 AQ+A +P E ++F+CPVC+ CGH+FC C++ ++ K C CR Sbjct: 13 AQSA-KPASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSA 71 Query: 345 L 343 L Sbjct: 72 L 72
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -3 Query: 522 AQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK-CPTCRRK 346 AQ+A +P E ++F+CPVC+ CGH+FC C++ ++ K C CR Sbjct: 13 AQSA-KPASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSA 71 Query: 345 L 343 L Sbjct: 72 L 72
>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)| Length = 450 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 5/59 (8%) Frame = -3 Query: 507 EPVKEIPKE---TKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK--CPTCRRK 346 EP+K + ++FSC C + LVN + CGH FC C+ + KK CP CR K Sbjct: 18 EPLKSTGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECREK 76
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 44.7 bits (104), Expect = 2e-04 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFXRVYL 313 C +C N + CGH+FC C K + A +KCPTC + + ++ ++L Sbjct: 611 CSLCSKNWKNTALKTCGHVFCDVCCKERLAARMRKCPTCNKPFSSNDLLSIHL 663
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 44.3 bits (103), Expect = 3e-04 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = -3 Query: 486 KETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCR 352 ++ F C VC++ V CGH +C CI++ + +KCP CR Sbjct: 2 RDEDFCCAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLCR 46
>PEX12_DROME (Q9VPT5) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 297 Score = 44.3 bits (103), Expect = 3e-04 Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 7/70 (10%) Frame = -3 Query: 504 PVKEIPKETKFS------CPVCMNELVNASX-TICGHIFCXKCIKASIQAXKKCPTCRRK 346 P K++PKE + S CPVC+ + + ++ G++FC KCI + ++ CP Sbjct: 226 PRKQLPKEVQQSLPQRGECPVCLLSIQTPTACSVSGYVFCWKCIVSHMKEHGTCPVTHYP 285 Query: 345 LTISNFXRVY 316 +++ + R+Y Sbjct: 286 ISLDDLVRIY 295
>AMFR_MOUSE (Q9R049) Autocrine motility factor receptor (EC 6.3.2.19) (AMF| receptor) Length = 643 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/73 (28%), Positives = 34/73 (46%) Frame = -3 Query: 540 NTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCP 361 N + A A PE + C +C + + A CGH+F C+++ ++ CP Sbjct: 321 NMEARFAVATPEELAV----NNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCP 376 Query: 360 TCRRKLTISNFXR 322 TCR L I++ R Sbjct: 377 TCRMSLNIADGSR 389
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCI-----KASIQAXKKCPTCRR 349 CP+C L A T CGH+FC C+ KAS CP CR+ Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRK 58
>ATL3I_ARATH (Q7X843) RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion| protein) Length = 349 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = -3 Query: 492 IPKETKFSCPVCMNELVNASXT----ICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 I E F C VC+NE + +C H F CI + + CP CRR L+ SN Sbjct: 199 ISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSN 256
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = -3 Query: 507 EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK--CPTCRRKLT 340 E V+E+ K + CP+C+ L +A T C H C +C+ AS + CP CR ++ Sbjct: 781 EVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTVS 838
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 43.1 bits (100), Expect = 6e-04 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = -3 Query: 552 PXTNNTPPKVAQAAPEPVKEIPKE-TKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA 376 P N+TP ++ + + +K I + C +C++ L T C H+FC CI IQ Sbjct: 728 PSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQCIQN 787 Query: 375 XK---KCPTCRRKL 343 + KCP CR + Sbjct: 788 EQPHAKCPLCRNDI 801
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 43.1 bits (100), Expect = 6e-04 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = -3 Query: 552 PXTNNTPPKVAQAAPEPVKEIPKE-TKFSCPVCMNELVNASXTICGHIFCXKCIKASI-- 382 P ++TP ++ + E +K I + C +C++ L T C H+FC CI I Sbjct: 725 PSRSDTPEELRKMLIEKMKIILSSGSDEECAICLDSLTFPVITHCAHVFCKPCICQVIHS 784 Query: 381 -QAXKKCPTCRRKL 343 Q KCP CR ++ Sbjct: 785 EQPHAKCPLCRNEI 798
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 43.1 bits (100), Expect = 6e-04 Identities = 19/65 (29%), Positives = 29/65 (44%) Frame = -3 Query: 540 NTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCP 361 NT KV + + V + +E F C +C E + T C H FC C ++ CP Sbjct: 147 NTDWKVDETQEKEVLKELEEIPFRCFLCKKEYTSPVVTKCNHYFCSSCFMKQMKVSTNCP 206 Query: 360 TCRRK 346 C ++ Sbjct: 207 ICGKE 211
>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)| (dRING protein) (Sex comb extra protein) Length = 435 Score = 43.1 bits (100), Expect = 6e-04 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Frame = -3 Query: 480 TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAX-KKCPTCRRKL 343 ++ CP+C++ L T C H FC CI ++++ K+CPTCR+KL Sbjct: 42 SELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 89
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 43.1 bits (100), Expect = 6e-04 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVY 316 C +C++ + + T CGH+FC CI ++CP CR T S+ +Y Sbjct: 327 CTLCLSTRQHPTATPCGHVFCWSCIMEWCNEKQECPLCRTPNTHSSLVCLY 377
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 837 Score = 42.7 bits (99), Expect = 8e-04 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Frame = -3 Query: 522 AQAAPEPVKEIPKETK--FSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCR 352 AQ+ + ++E ++ K +CP C + C H+FC CIK +KCP C Sbjct: 765 AQSGDQVLEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCN 824 Query: 351 RKLTISNFXRVYL 313 ++F R+++ Sbjct: 825 SNFGANDFHRIFI 837
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 42.7 bits (99), Expect = 8e-04 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Frame = -3 Query: 552 PXTNNTPPKVAQAAPEPVKEIPKE-TKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA 376 P N+TP ++ + +K I + C +C++ L T C H+FC CI IQ Sbjct: 731 PSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQN 790 Query: 375 XK---KCPTCRRKLTISN 331 + KCP CR + N Sbjct: 791 EQPHAKCPLCRNDIHEDN 808
>LNX2_HUMAN (Q8N448) Ligand of Numb-protein X 2 (Numb-binding protein 2) (PDZ| domain-containing RING finger protein 1) Length = 690 Score = 42.7 bits (99), Expect = 8e-04 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKL 343 C +C+ L+ T CGH FC KC++ +Q CP R++L Sbjct: 50 CHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRL 91
>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)| Length = 687 Score = 42.7 bits (99), Expect = 8e-04 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKL 343 C +C+ L+ T CGH FC KC++ +Q CP R++L Sbjct: 51 CHICLQPLLQPLDTPCGHTFCHKCLRNFLQEKDFCPLDRKRL 92
>RN146_RAT (Q5XIK5) RING finger protein 146| Length = 352 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/72 (26%), Positives = 33/72 (45%) Frame = -3 Query: 558 DIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQ 379 +I + N P +A+ P T C +C+ V+ C H+FC C+K + Sbjct: 6 EIDHSLNMLPTNKKASETCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASW 65 Query: 378 AXKKCPTCRRKL 343 K+C CR+++ Sbjct: 66 LGKRCALCRQEI 77
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Frame = -3 Query: 522 AQAAPEPVKEIPKETK--FSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCR 352 AQ + ++E ++ K +CP C + C H+FC CIK +KCP C Sbjct: 756 AQTGDQVLQEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCN 815 Query: 351 RKLTISNFXRVYL 313 ++F R+++ Sbjct: 816 SNFGANDFHRIFI 828
>RO52_HUMAN (P19474) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) (RING finger protein 81) Length = 475 Score = 42.4 bits (98), Expect = 0.001 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCI-KASIQAXKKCPTCRRKLTISN 331 +CP+C++ V CGH FC +CI + CP CR++ + N Sbjct: 15 TCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLKN 62
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 42.0 bits (97), Expect = 0.001 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFXRVYL 313 C +C + + +CGH+FC +C + + A +KCP C + + ++ V+L Sbjct: 648 CSLCSKNWKDTALKVCGHVFCHQCAQDRLDARLRKCPNCNKPFSQNDLLTVHL 700
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -3 Query: 504 PVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK-CPTCRRKL 343 P E +F+CPVC+ CGH+FC C++ ++ K C CR L Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSTL 71
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -3 Query: 504 PVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK-CPTCRRKL 343 P E +F+CPVC+ CGH+FC C++ ++ K C CR L Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSAL 71
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -3 Query: 504 PVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK-CPTCRRKL 343 P E +F+CPVC+ CGH+FC C++ ++ K C CR L Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSAL 71
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -3 Query: 504 PVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK-CPTCRRKL 343 P E +F+CPVC+ CGH+FC C++ ++ K C CR L Sbjct: 19 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSAL 73
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 41.6 bits (96), Expect = 0.002 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKK------CPTCRR 349 CP+C L A T CGH+FC C+ ++ CP CR+ Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCCPLCRK 59
>RN146_PONPY (Q5REL3) RING finger protein 146| Length = 358 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = -3 Query: 558 DIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQ 379 +I + N P +A P T C +C+ V+ C H+FC C+K + Sbjct: 6 EIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASW 65 Query: 378 AXKKCPTCRRKL 343 K+C CR+++ Sbjct: 66 LGKRCALCRQEI 77
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFXRVYL 313 C +C + CGH+FC C K + A +KCPTC + + ++ V+L Sbjct: 591 CSLCSKNWKDTVIKTCGHVFCADCCKERLAARMRKCPTCNKGFSSNDLLVVHL 643
>RN146_MOUSE (Q9CZW6) RING finger protein 146| Length = 359 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = -3 Query: 558 DIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQ 379 +I + N P +A P T C +C+ V+ C H+FC C+K + Sbjct: 8 EIDHSINMLPTNKKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASW 67 Query: 378 AXKKCPTCRRKL 343 K+C CR+++ Sbjct: 68 LGKRCALCRQEI 79
>RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)| Length = 359 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = -3 Query: 558 DIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQ 379 +I + N P +A P T C +C+ V+ C H+FC C+K + Sbjct: 7 EIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASW 66 Query: 378 AXKKCPTCRRKL 343 K+C CR+++ Sbjct: 67 LGKRCALCRQEI 78
>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)| Length = 1044 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = -3 Query: 507 EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISN 331 E ++E KET +CP C + +A + C H+FC C++ + +KCP C ++ Sbjct: 980 EEIREY-KET-LTCPSCKVKRKDAVLSKCFHVFCYDCLRTRYETRQRKCPKCNCAFGAND 1037 Query: 330 FXRVYL 313 + R+YL Sbjct: 1038 YHRLYL 1043
>PEX10_SCHPO (Q9UUF0) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 306 Score = 41.2 bits (95), Expect = 0.002 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCR 352 C +CM + + T CGHIFC CI +CP CR Sbjct: 256 CSLCMEFIHCPAATECGHIFCWSCINGWTSKKSECPLCR 294
>RO52_MOUSE (Q62191) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) Length = 470 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCI-KASIQAXKKCPTCRRKLTISN 331 +C +C++ +V CGH FC +CI + CP CR++ + N Sbjct: 19 TCSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCPECRQQFLLRN 66
>TRI43_HUMAN (Q96BQ3) Tripartite motif protein 43| Length = 446 Score = 41.2 bits (95), Expect = 0.002 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKAS---IQAXKKCPTCR 352 + + +C +C+N LV+ CGH FC C+ S Q+ CP CR Sbjct: 10 QKELTCVICLNYLVDPVTICCGHSFCRPCLCLSWEEAQSPANCPACR 56
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 7/58 (12%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASI-------QAXKKCPTCRRKLTISN 331 E + +CP+C+ L CGH FC CI A I + CP C+ + N Sbjct: 10 EKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67
>MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 445 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/53 (35%), Positives = 28/53 (52%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVYLP 310 C VC E +N++ CGH C + A +Q+ CP CR + + + VYLP Sbjct: 387 CMVCCEEEINSTFCPCGHTVCCESCAAQLQS---CPVCRSR--VEHVQHVYLP 434
>DTX3L_HUMAN (Q8TDB6) Protein deltex 3-like protein (B-lymphoma- and| BAL-associated protein) (Rhysin-2) (Rhysin2) Length = 740 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = -3 Query: 561 VDIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTI-CGHIFCXKCIKAS 385 +D + P + + E+ K+ K C +CM+ + N C H FC CI + Sbjct: 530 IDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKA 589 Query: 384 IQAXKKCPTCR 352 + CPTC+ Sbjct: 590 MSYKPICPTCQ 600
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 40.4 bits (93), Expect = 0.004 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVYL 313 C +C + L T CGH FC CI+ + +CP C +L + + +L Sbjct: 32 CHICKDMLQTPVLTQCGHTFCSLCIREYLNKESRCPLCLAELRQNMLQKEFL 83
>ATL1F_ARATH (Q9LQM2) Putative RING-H2 finger protein ATL1F precursor| Length = 332 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Frame = -3 Query: 528 KVAQAAPEPVKEIPKETKFSCPVCMNELVNASX----TICGHIFCXKCIKASIQAXKKCP 361 K+ ++ PE + C +C+ E ++ + C H F CI + K CP Sbjct: 134 KIIESFPEYPYSVKDHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCP 193 Query: 360 TCRRKLTISNFXRVYLPM 307 CRR+L + + + P+ Sbjct: 194 VCRRELDVEDRTSLEKPL 211
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 40.4 bits (93), Expect = 0.004 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRR 349 C +C N V+ T C H FC C S Q KCP C++ Sbjct: 241 CFICGNPFVDPIVTKCKHYFCTGCALKSFQKSSKCPICQQ 280
>DG17_DICDI (P11467) Protein DG17| Length = 458 Score = 40.0 bits (92), Expect = 0.005 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = -3 Query: 498 KEIPKETKFSCPVCMNELVNASXTIC--GHIFCXKCIKASIQAXKKCPTCR 352 + + K+ K++CP+C + C GH C +C + S++ K+C TC+ Sbjct: 17 ESLQKKNKYTCPICFEFIYKKQIYQCKSGHHACKECWEKSLETKKECMTCK 67
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 40.0 bits (92), Expect = 0.005 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Frame = -3 Query: 507 EPVKEIPKE--TKFSCPVCMNELVNASXTICGHIFCXKCIKASIQA---XKKCPTCRRKL 343 EP K+ +F C +C++ +A ++CGH+FC C+ + + CP C+ + Sbjct: 11 EPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAI 70 Query: 342 TISNFXRVY 316 + +Y Sbjct: 71 DGNKVVPIY 79
>RAD5_EMENI (Q5BHD6) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1202 Score = 40.0 bits (92), Expect = 0.005 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 7/87 (8%) Frame = -3 Query: 558 DIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNE-LVNASXTICGHIFCXKCIKASI 382 D +N P + +++I E+ CP+C E +++ + T C H C C+K I Sbjct: 862 DAESSNEPPDPSMKFTAHALRQIQTESAGECPICSEEPMIDPAVTACWHSACKGCLKDYI 921 Query: 381 QAXK------KCPTCRRKLTISNFXRV 319 Q + +C +CR L + V Sbjct: 922 QHQRDKGVQPRCFSCRADLNPQDIFEV 948
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 40.0 bits (92), Expect = 0.005 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVYL 313 C +C L T C H FC CI+ + CP C+ + SN RV L Sbjct: 36 CYICKEFLKAPVITSCNHTFCSHCIREYLIVNSHCPLCKAEQFESNLKRVIL 87
>ATL5L_ARATH (Q9FIR0) Putative RING-H2 finger protein ATL5L| Length = 289 Score = 39.7 bits (91), Expect = 0.006 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 11/84 (13%) Frame = -3 Query: 561 VDIPXTNNTPPKVAQAAP----EPVKEIPKETKFS--CPVCMNE-----LVNASXTICGH 415 V P P + Q+ P VK++ +E K+ C +C+ E ++ T C H Sbjct: 78 VQPPVNPGLEPHIIQSYPLFPFSSVKDL-REDKYGLECAICLLEFEEEHILLRLLTTCYH 136 Query: 414 IFCXKCIKASIQAXKKCPTCRRKL 343 +F +CI +++ K CP CRR L Sbjct: 137 VFHQECIDQWLESNKTCPVCRRNL 160
>TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (TRAFAMN) Length = 567 Score = 39.7 bits (91), Expect = 0.006 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK-KCPTCRRKL 343 E K+ C C L N T CGH FC C+ A + + KC C+ + Sbjct: 47 EDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPKCTACQESI 94
>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 337 Score = 39.7 bits (91), Expect = 0.006 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRR 349 E C +C+ + + S CGH+FC C+ + + +CP CR+ Sbjct: 281 EASRKCILCLMNMSDPSCAPCGHLFCWSCLMSWCKERPECPLCRQ 325
>PEX12_ARATH (Q9M841) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 372 Score = 39.7 bits (91), Expect = 0.006 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 7/80 (8%) Frame = -3 Query: 534 PPKVAQAAPEPVKEIPKE------TKFSCPVCMNELVNASX-TICGHIFCXKCIKASIQA 376 PP AP+ + ++ KE + C +C+ + N S T+ G +FC C+ + Sbjct: 290 PPPPPPPAPKVINQMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYSCVFKYVSK 349 Query: 375 XKKCPTCRRKLTISNFXRVY 316 K+CP ++ R++ Sbjct: 350 YKRCPVTLIPASVDQIRRLF 369
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 39.7 bits (91), Expect = 0.006 Identities = 15/55 (27%), Positives = 24/55 (43%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRV 319 E + C +C + A C H FC CI ++ +CP CR+ + + V Sbjct: 398 ENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSKTYSLV 452
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 39.3 bits (90), Expect = 0.008 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASI-QAXKKCPTCRRKLTISNFXRVYL 313 C VC + N CGH+FC +C+ + +KCP+C + S+ +L Sbjct: 655 CSVCRSNFKNTILKGCGHVFCNECVDNRLANRMRKCPSCNKAFDRSDAMPAHL 707
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 39.3 bits (90), Expect = 0.008 Identities = 22/75 (29%), Positives = 33/75 (44%) Frame = -3 Query: 561 VDIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASI 382 + + T + P + + P E P K C +C + + T CGH FC +C S Sbjct: 25 MSLRSTFSLPEEEEEPEPLVFAEQPS-VKLCCQLCCSVFKDPVITTCGHTFCRRCALKS- 82 Query: 381 QAXKKCPTCRRKLTI 337 +KCP KLT+ Sbjct: 83 ---EKCPVDNAKLTV 94
>RN126_MOUSE (Q91YL2) RING finger protein 126| Length = 313 Score = 39.3 bits (90), Expect = 0.008 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Frame = -3 Query: 540 NTPPKVA-----QAAPE-PVKEIPKETKFSCPVCMNELV---NASXTICGHIFCXKCIKA 388 NT P A QA P PV E + CPVC + + C H+F CI Sbjct: 201 NTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVP 260 Query: 387 SIQAXKKCPTCRRKLTISN 331 ++ CP CR+ LT N Sbjct: 261 WLEQHDSCPVCRKSLTGQN 279
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 39.3 bits (90), Expect = 0.008 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 8/72 (11%) Frame = -3 Query: 543 NNTPPKVAQAAP------EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASI 382 +N P V+Q AP E ++++ CP+C+ + T C H C +C+ S Sbjct: 1009 DNNPDSVSQNAPSRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSW 1068 Query: 381 QAXK--KCPTCR 352 ++ CP CR Sbjct: 1069 RSPSCGLCPICR 1080
>YR311_MIMIV (Q5UPZ3) Hypothetical RING finger protein R311| Length = 659 Score = 39.3 bits (90), Expect = 0.008 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTIS 334 CPVC ++ + ICGH C C+ + K CP C + I+ Sbjct: 502 CPVCYDDDYIKTKLICGHTVCLTCVLNILPNSKGCPLCMEPININ 546
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 39.3 bits (90), Expect = 0.008 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLT 340 C +CM+ V+ C H FC KCI + CP CRR++T Sbjct: 155 CCICMDGRVDLILP-CAHSFCQKCIDKWSDRHRSCPVCRRQVT 196
>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived| apoptosis-inducing RBCC protein) (MAIR protein) (Nc8 protein) (Hemopoeitic lineage switch protein 5) Length = 501 Score = 39.3 bits (90), Expect = 0.008 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = -3 Query: 513 APEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKA--SIQAXKKCPTCRRK 346 +P P + +E C VC + +A CGH FC +C+ +Q CP C+ + Sbjct: 8 SPGPSRSFKEE--LLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCPVCKER 63
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 38.9 bits (89), Expect = 0.011 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKL 343 E + C +C + A C H FC CI ++ +CP CR+ + Sbjct: 401 ENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDI 447
>PEX12_CAEEL (Q19189) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 359 Score = 38.9 bits (89), Expect = 0.011 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -3 Query: 468 CPVCMNELVNASXT-ICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVYL 313 CP+C+ + VN + + G++FC CI + KCP + + R+++ Sbjct: 307 CPICLKKRVNDTALFVSGYVFCYTCINQYVNTYNKCPVTGCPANVQHLIRLFV 359
>IAP1_NPVAC (P41435) Apoptosis inhibitor 1 (IAP-1)| Length = 286 Score = 38.9 bits (89), Expect = 0.011 Identities = 19/57 (33%), Positives = 32/57 (56%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRVYL 313 E K+ C VC+ +A C H FC C++ +KCPTCR+ +T +F ++++ Sbjct: 233 EEKYECKVCLERQRDAVLMPCRH-FCV-CVQCYFGLDQKCPTCRQDVT--DFIKIFV 285
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 38.9 bits (89), Expect = 0.011 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Frame = -3 Query: 507 EPVKEIPKETK-----FSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 E V+E+ +E + F+C +C T CGH FC C Q KC C Sbjct: 219 EGVREVEEEDEEEEVPFACLICRQPFTQPVVTKCGHYFCMGCAAKRFQKSPKCYAC 274
>ATL4O_ARATH (Q8W571) RING-H2 finger protein ATL4O precursor| Length = 322 Score = 38.9 bits (89), Expect = 0.011 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = -3 Query: 468 CPVCMNELVNASXT----ICGHIFCXKCIKASIQAXKKCPTCRRKLT 340 C +C+NEL + IC H+F CI + + CP CR LT Sbjct: 123 CAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLT 169
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 38.5 bits (88), Expect = 0.014 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 +T C +C + L T CGH FC CI+ + CP C Sbjct: 23 DTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLC 65
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 38.5 bits (88), Expect = 0.014 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = -3 Query: 477 KFSCPVCMNELVNASXTICGHIFCXKCIKASI--QAXKKCPTCRRKLT 340 + +CP+C+ + CGH FC CI + Q+ CP CR +T Sbjct: 142 ELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECRESIT 189
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 38.5 bits (88), Expect = 0.014 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRRKLT 340 CP+C+ + T C HIFC C+ + K +CP C+ ++T Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEIT 69
>RN126_HUMAN (Q9BV68) RING finger protein 126| Length = 326 Score = 38.5 bits (88), Expect = 0.014 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Frame = -3 Query: 540 NTPPKVA-----QAAPE-PVKEIPKETKFSCPVCMNELV---NASXTICGHIFCXKCIKA 388 NT P A QA P PV E + CPVC ++ C H+F CI Sbjct: 199 NTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVP 258 Query: 387 SIQAXKKCPTCRRKLTISN 331 ++ CP CR+ LT N Sbjct: 259 WLEQHDSCPVCRKSLTGQN 277
>RFP2_HUMAN (O60858) Ret finger protein 2 (Leukemia-associated protein 5)| (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Putative tumor suppressor RFP2) (Tripartite motif protein 13) (RING finger protein 77) Length = 407 Score = 38.5 bits (88), Expect = 0.014 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 10/56 (17%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQ----------AXKKCPTCRRK 346 E +CP+C + + C H FC KC++ ++ A KCPTCR++ Sbjct: 5 EEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 38.5 bits (88), Expect = 0.014 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRRKLT 340 CP+C+ + T C HIFC C+ + K +CP C+ ++T Sbjct: 24 CPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEIT 69
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 38.5 bits (88), Expect = 0.014 Identities = 22/75 (29%), Positives = 33/75 (44%) Frame = -3 Query: 561 VDIPXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASI 382 + + T + P + + P E P K C +C + + T CGH FC +C S Sbjct: 101 MSLRSTFSLPEEEEEPEPLVFAEQPS-VKLCCQLCCSVFKDPVITTCGHTFCRRCALKS- 158 Query: 381 QAXKKCPTCRRKLTI 337 +KCP KLT+ Sbjct: 159 ---EKCPVDNVKLTV 170
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 38.5 bits (88), Expect = 0.014 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Frame = -3 Query: 516 AAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKC---IKASIQAXKKCPTCRRK 346 A P++ + +E +C +C++ L + CGH+FC C I CP C++ Sbjct: 2 ATSAPLRSLEEEV--TCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKP 59 Query: 345 LTISNFXRVY 316 T N V+ Sbjct: 60 FTKENIRPVW 69
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 38.1 bits (87), Expect = 0.019 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASI-QAXKKCPTCRRKLTISNFXR 322 C +C T CGH FC CI+ + ++CPTC ++ IS + Sbjct: 28 CHICKEFFTAPMITGCGHTFCSLCIQRYLTNTSQRCPTCMQEQQISQLRK 77
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 38.1 bits (87), Expect = 0.019 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKC---IKASIQAXKKCPTCRRKLTISN 331 E + CPVC+ CGH +C C + + + +CP CR+++ S+ Sbjct: 11 EDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEVDSSS 64
>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1151 Score = 38.1 bits (87), Expect = 0.019 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 9/82 (10%) Frame = -3 Query: 552 PXTNNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTI---CGHIFCXKCIK--A 388 P N+ K+ ++ + + C +C E + +S + C H+FC +C++ Sbjct: 869 PFENDELDKLIESVEAKFIDSNQLIPVECSICTAEPIESSSAVVTECEHVFCKECLEEYG 928 Query: 387 SIQAXK----KCPTCRRKLTIS 334 + Q K KCP CRR + ++ Sbjct: 929 NFQKEKSLQQKCPNCRRDINLN 950
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 38.1 bits (87), Expect = 0.019 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -3 Query: 513 APEPVKEIPKETKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKKCPTCRRKLT 340 +P P + T CP+C++ + T+ C H FC CI+ CP C ++T Sbjct: 31 SPPPQRLSLPLTVMDCPICLDVAATEAQTLPCMHKFCLDCIQRWTLTSTACPLCNARVT 89
>UHRF1_MOUSE (Q8VDF2) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Nuclear zinc finger protein Np95) (Nuclear protein 95) Length = 782 Score = 37.7 bits (86), Expect = 0.024 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -3 Query: 474 FSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK-KCPTCRRKLTISNFXRVYLPM 307 F C C + T+C H C C+ S +A CP CR +L S+ RV P+ Sbjct: 711 FQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACRFELDHSSPTRVNQPL 767
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 37.7 bits (86), Expect = 0.024 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = -3 Query: 504 PVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKA---SIQAXKKCPTCRRKLTI 337 P+++I E +CP+C++ C H FC C+++ ++ KCP CR + I Sbjct: 33 PLEKI--EQLLTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNI 89
>TRI11_MOUSE (Q99PQ2) Tripartite motif protein 11 (EC 6.3.2.-)| Length = 467 Score = 37.7 bits (86), Expect = 0.024 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Frame = -3 Query: 516 AAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIK---ASIQAXKKCPTCRRK 346 AAP+ + +E +C +C++ + T CGH FC +CI+ + CP C R+ Sbjct: 2 AAPDLSTNLQEEA--TCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPEC-RE 58 Query: 345 LTISNFXRVYLPMA 304 L+ R P+A Sbjct: 59 LSAQRNLRPNRPLA 72
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 37.7 bits (86), Expect = 0.024 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 8/49 (16%) Frame = -3 Query: 474 FSCPVCMNELVNASXTICGHIFCXKCIK--------ASIQAXKKCPTCR 352 F C +C+ E N S CGH+FC CI+ ++ + +CP CR Sbjct: 253 FQCSICL-ENKNPSALFCGHLFCWTCIQEHAVAATSSASTSSARCPQCR 300
>RFP2_MOUSE (Q9CYB0) Ret finger protein 2 (Putative tumor suppressor RFP2)| (Tripartite motif-containing protein 13) Length = 407 Score = 37.7 bits (86), Expect = 0.024 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 10/56 (17%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK----------KCPTCRRK 346 E +CP+C + + C H FC KC++ ++ KCPTCR++ Sbjct: 5 EEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKE 60
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 37.7 bits (86), Expect = 0.024 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = -3 Query: 540 NTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCP 361 N + ++A +++IP F C +C + + T CGH FC C ++ KC Sbjct: 179 NADKEDSKAVTLDLEKIP----FKCTLCKEDYKSPVVTNCGHYFCGSCFAKDMKKGTKCF 234 Query: 360 TCRRK 346 C ++ Sbjct: 235 ICHKE 239
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 37.7 bits (86), Expect = 0.024 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRRKLT 340 CP+C+ + T C HIFC C+ + K +CP C+ +T Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 37.7 bits (86), Expect = 0.024 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRRKLT 340 CP+C+ + T C HIFC C+ + K +CP C+ +T Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 37.7 bits (86), Expect = 0.024 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRRKLT 340 CP+C+ + T C HIFC C+ + K +CP C+ +T Sbjct: 24 CPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDIT 69
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 37.7 bits (86), Expect = 0.024 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRRKLT 340 CP+C+ + T C HIFC C+ + K +CP C+ +T Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 37.7 bits (86), Expect = 0.024 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRRKLT 340 CP+C+ + T C HIFC C+ + K +CP C+ +T Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 37.7 bits (86), Expect = 0.024 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRRKLT 340 CP+C+ + T C HIFC C+ + K +CP C+ +T Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 37.7 bits (86), Expect = 0.024 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRRKLT 340 CP+C+ + T C HIFC C+ + K +CP C+ +T Sbjct: 24 CPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDIT 69
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 37.7 bits (86), Expect = 0.024 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = -3 Query: 501 VKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 VK++ E + C +CM+ + C H FC KCI + CP CR ++T +N Sbjct: 138 VKQLTDEEE--CCICMDGKADLILP-CAHSFCQKCIDKWSGQSRNCPVCRIQVTAAN 191
>UHRF1_RAT (Q7TPK1) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Liver regeneration-related protein LRRG126) Length = 774 Score = 37.4 bits (85), Expect = 0.032 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = -3 Query: 474 FSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK-KCPTCRRKLTISNFXRVYLPM 307 F C C + T+C H C C+ S +A CP CR L S+ RV P+ Sbjct: 703 FQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACRYDLDHSSPTRVNQPL 759
>TRI11_HUMAN (Q96F44) Tripartite motif protein 11 (EC 6.3.2.-) (RING finger| protein 92) (BIA1 protein) Length = 468 Score = 37.4 bits (85), Expect = 0.032 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Frame = -3 Query: 516 AAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIK---ASIQAXKKCPTCR 352 AAP+ + +E +C +C++ + T CGH FC +CI+ + CP CR Sbjct: 2 AAPDLSTNLQEEA--TCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECR 57
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 37.4 bits (85), Expect = 0.032 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = -3 Query: 516 AAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKC---IKASIQAXKKCPTCRRK 346 A P++ + +E +C +C++ L + CGH+FC C ++ + CP C++ Sbjct: 2 ATSAPLRSLEEEV--TCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKP 59 Query: 345 LTISNFXRVY 316 N V+ Sbjct: 60 FKKENIRPVW 69
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 37.4 bits (85), Expect = 0.032 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = -3 Query: 516 AAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKC---IKASIQAXKKCPTCRRK 346 A P++ + +E +C +C++ L + CGH+FC C ++ + CP C++ Sbjct: 2 ATSAPLRSLEEEV--TCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKP 59 Query: 345 LTISNFXRVY 316 N V+ Sbjct: 60 FKKENIRPVW 69
>RAD5_ASPFU (Q4WVM1) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1245 Score = 37.4 bits (85), Expect = 0.032 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Frame = -3 Query: 522 AQAAPEPVKEIPKETKFSCPVCMNE-LVNASXTICGHIFCXKCIKASIQ------AXKKC 364 A+ +++I E+ CP+C E +++ + T C H C KC++ I+ +C Sbjct: 923 AKFTTHALRQIQTESSGECPICSEEPMIDPAVTACWHSACKKCLEDYIRHQTDKGVPPRC 982 Query: 363 PTCRRKLTISNFXRV 319 +CR +T + +V Sbjct: 983 FSCRAPVTSRDIFQV 997
>CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24| Length = 256 Score = 37.4 bits (85), Expect = 0.032 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 +CP+C E + T C H FC KC A + + C C Sbjct: 205 TCPICQGEFKSPVVTQCCHYFCEKCFLAKHKKKQNCFVC 243
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 37.4 bits (85), Expect = 0.032 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKA---SIQAXKKCPTCRRKLTISN 331 + + CP+C+ CGH +C C+ + + + +CP CR+ + S+ Sbjct: 11 QDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSS 64
>TRAF3_HUMAN (Q13114) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (CD40-binding protein) (CD40BP) (LMP1-associated protein) (LAP1) (CAP-1) Length = 568 Score = 37.4 bits (85), Expect = 0.032 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK-KCPTCRRKL 343 E K+ C C L + T CGH FC C+ A + + KC C+ + Sbjct: 48 EDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESI 95
>CM007_PONPY (Q5RD97) Protein C13orf7 homolog| Length = 726 Score = 37.4 bits (85), Expect = 0.032 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 +C +C+ ++ I H+FC CI ++ +CP CR +T N Sbjct: 17 TCHICLGKVRQPVICINNHVFCSICIDLWLKNNSQCPACRVPITPEN 63
>CM007_HUMAN (Q5W0B1) Protein C13orf7| Length = 726 Score = 37.4 bits (85), Expect = 0.032 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 +C +C+ ++ I H+FC CI ++ +CP CR +T N Sbjct: 17 TCHICLGKVRQPVICINNHVFCSICIDLWLKNNSQCPACRVPITPEN 63
>PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1062 Score = 37.4 bits (85), Expect = 0.032 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPT-CRRKLTISNFXRVYLPM 307 C +C L + T CGH+FC C+ + CP+ CR +L+ V LP+ Sbjct: 18 CALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPSRCRGRLSAKELNHV-LPL 71
>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24| Length = 226 Score = 37.4 bits (85), Expect = 0.032 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = -3 Query: 507 EPVKEIPKET-KFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 E +E KE F C +C T CGH FC KC I+ K C C Sbjct: 151 EQKEETRKEAVPFKCVLCKESYERPVKTNCGHYFCQKCFVNRIKIDKSCFIC 202
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 37.4 bits (85), Expect = 0.032 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = -3 Query: 501 VKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 VK++ E + C +CM+ + C H FC KCI + CP CR ++T +N Sbjct: 146 VKQLTDEEE--CCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 199
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 37.4 bits (85), Expect = 0.032 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = -3 Query: 501 VKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 VK++ E + C +CM+ + C H FC KCI + CP CR ++T +N Sbjct: 146 VKQLTDEEE--CCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 199
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 37.4 bits (85), Expect = 0.032 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = -3 Query: 501 VKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 VK++ E + C +CM+ + C H FC KCI + CP CR ++T +N Sbjct: 146 VKQLTDEEE--CCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 199
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 37.4 bits (85), Expect = 0.032 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = -3 Query: 501 VKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 VK++ E + C +CM+ + C H FC KCI + CP CR ++T +N Sbjct: 146 VKQLTDEEE--CCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 199
>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of| Numb-protein X 3) (Semaphorin cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1066 Score = 37.0 bits (84), Expect = 0.041 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPT-CRRKLTISNFXRVYLPM 307 C +C L + T CGH+FC C+ + CP CR +L+ V LP+ Sbjct: 18 CALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHV-LPL 71
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 37.0 bits (84), Expect = 0.041 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKAS------IQAXKKCPTCR 352 +CP+C+ L CGH FC C+ A+ + CP CR Sbjct: 14 TCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1063 Score = 37.0 bits (84), Expect = 0.041 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPT-CRRKLTISNFXRVYLPM 307 C +C L + T CGH+FC C+ + CP CR +L+ V LP+ Sbjct: 18 CALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHV-LPL 71
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 37.0 bits (84), Expect = 0.041 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = -3 Query: 498 KEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK--CPTCR 352 +EIP + F C VC+ L CGH+ C C+ S+ ++ CP CR Sbjct: 18 EEIPDQ--FLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICR 66 Score = 32.7 bits (73), Expect = 0.78 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 12/80 (15%) Frame = -3 Query: 558 DIP-XTNNTPPKVAQAAPEPVKEIPKETKFS---------CPVCMNELVNASXTICGHIF 409 DIP N P A+A E+ K+ K S C C LV CGH++ Sbjct: 152 DIPCIPKNQEPTDAKALNVHENELLKDNKVSKQISKDDLLCSACKELLVRPVVLNCGHVY 211 Query: 408 CXKCIKASIQAXK--KCPTC 355 C C+ + + KC C Sbjct: 212 CEGCVVDMAEESEKIKCQEC 231
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 37.0 bits (84), Expect = 0.041 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -3 Query: 507 EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 E ++ IP F+C +C N T CGH FC C ++Q +K P+C Sbjct: 232 EQLENIP----FACIICKKPYQNPIVTKCGHYFCESC---ALQRYRKNPSC 275
>TRAF5_MOUSE (P70191) TNF receptor-associated factor 5| Length = 558 Score = 37.0 bits (84), Expect = 0.041 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 E ++ C C + L N T CGH FC +CI+ S++ P C Sbjct: 40 EERYKCAFCHSVLHNPHQTGCGHRFCQQCIR-SLRELNSVPIC 81
>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Xsiah-2) Length = 313 Score = 37.0 bits (84), Expect = 0.041 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Frame = -3 Query: 552 PXTNNTPPKVAQAAPEPVKEIPKE--TKFSCPVCMNELVNASXTI-CGHIFCXKCIKASI 382 P + P A A P+ + +E + F CPVC + ++ GH+ C +C Sbjct: 39 PGASAPPAPTAAAITGPLSQQHQELTSLFECPVCFDYVLPPILQCQAGHLVCNQCR---- 94 Query: 381 QAXKKCPTCRRKLTIS 334 Q CPTCR LT S Sbjct: 95 QKLSCCPTCRASLTPS 110
>TRI34_MOUSE (Q99PP6) Tripartite motif protein 34| Length = 485 Score = 37.0 bits (84), Expect = 0.041 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCI----KASIQAXKK--CPTCRRKLTISN 331 + K +CPVC L A CGH C C+ A I +K CP C + ++ N Sbjct: 10 QEKTTCPVCQELLTKALSLGCGHRVCQACLITKKNAVINPREKSSCPVCGTRFSLEN 66
>ATL2A_ARATH (O22755) RING-H2 finger protein ATL2A (RING-H2 zinc finger protein| RHA3a) Length = 185 Score = 37.0 bits (84), Expect = 0.041 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = -3 Query: 468 CPVCMNELVNASXT----ICGHIFCXKCIKASIQAXKKCPTCRRKLT 340 C +C+ + + +CGH F +CI + + CP+CRR LT Sbjct: 102 CAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILT 148
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 36.6 bits (83), Expect = 0.054 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Frame = -3 Query: 477 KFSCPVCMNELVNASXTICGHIFCXKCIKA--SIQAXKKCPTCRRKLT 340 + +CP+C+ + CGH FC CI Q+ CP C+ +T Sbjct: 143 ELTCPLCVELFKDPVMVACGHNFCRSCIDKVWEGQSSFACPECKESIT 190
>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24| Length = 250 Score = 36.6 bits (83), Expect = 0.054 Identities = 17/58 (29%), Positives = 23/58 (39%) Frame = -3 Query: 528 KVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 KV Q + IP F C +C T CGH FC C ++ ++C C Sbjct: 142 KVGQTEARDLDSIP----FRCVLCRGHYRAPVRTRCGHYFCGGCFARRVRETRQCAVC 195
>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein| 61) (IE61) Length = 467 Score = 36.6 bits (83), Expect = 0.054 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -3 Query: 471 SCPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKKCPTCR 352 +C +CM+ + + T+ C H FC CI+A +CP CR Sbjct: 18 TCTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSVQCPLCR 58
>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) Length = 634 Score = 36.6 bits (83), Expect = 0.054 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -3 Query: 489 PKETKFSCPVCMNELVNASXTICGHIFCXKCIKAS--IQAXK-KCPTCRR 349 P + SC VC+ T CGH FC C+ + +Q +CP CR+ Sbjct: 6 PLAEELSCSVCLELFKEPVTTPCGHNFCTSCLDETWVVQGPPYRCPQCRK 55
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 36.6 bits (83), Expect = 0.054 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 9/51 (17%) Frame = -3 Query: 468 CPVCMNE---LVNASXTICGHIFCXKCIKASIQAXK------KCPTCRRKL 343 C +C E L A T CGH FC KC+ I+ KCP CR ++ Sbjct: 914 CSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGLKCPNCRNQI 964
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 36.6 bits (83), Expect = 0.054 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Frame = -3 Query: 516 AAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKC---IKASIQAXKKCPTCRRK 346 A P++ + +E +C +C++ L + CGH+FC C I+ CP C++ Sbjct: 2 AVSAPLRSLEEEV--TCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKP 59 Query: 345 LTISNFXRVY 316 N V+ Sbjct: 60 FKKENIRPVW 69
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of| interleukin 2 receptor) Length = 496 Score = 36.6 bits (83), Expect = 0.054 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Frame = -3 Query: 501 VKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK------KCPTCR 352 V E+ KE + +CP+C+ L C H FC CI + ++ + CP CR Sbjct: 5 VLEMIKE-EVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCR 59
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 36.6 bits (83), Expect = 0.054 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Frame = -3 Query: 516 AAPEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKC---IKASIQAXKKCPTCRRK 346 A P++ + +E +C +C++ L + CGH+FC C I+ CP C++ Sbjct: 2 AVSAPLRSLEEEV--TCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKP 59 Query: 345 LTISNFXRVY 316 N V+ Sbjct: 60 FKKENIRPVW 69
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 36.6 bits (83), Expect = 0.054 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -3 Query: 471 SCPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKKCPTCR 352 SC +C++ + A+ + C H FC CI+ ++ CP C+ Sbjct: 12 SCCICLDAITGAARALPCLHAFCLACIRRWLEGRPTCPLCK 52
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 36.6 bits (83), Expect = 0.054 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -3 Query: 471 SCPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKKCPTCR 352 SC +C++ + A+ + C H FC CI+ ++ CP C+ Sbjct: 12 SCCICLDAITGAARALPCLHAFCLACIRRWLEGRPTCPLCK 52
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 36.6 bits (83), Expect = 0.054 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -3 Query: 468 CPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKKCPTCR 352 CP+C+ + N S + C H FC CI I+ CP C+ Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCK 47
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 36.6 bits (83), Expect = 0.054 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -3 Query: 468 CPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKKCPTCR 352 CP+C+ + N S + C H FC CI I+ CP C+ Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCK 47
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 36.6 bits (83), Expect = 0.054 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = -3 Query: 498 KEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 +E+ + F+C +C + + T CGH FC C ++Q +K P+C Sbjct: 243 EELLESIPFACIICKSSYKSPIVTKCGHYFCESC---ALQRYRKNPSC 287
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 36.6 bits (83), Expect = 0.054 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -3 Query: 510 PEPVKEIPKETKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKKCPTCRRKLTIS 334 P PV C +C L+NA+ + C H FC C+ ++ + CP C ++ I+ Sbjct: 249 PRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRKERFCPRC--EMVIN 306 Query: 333 N 331 N Sbjct: 307 N 307
>TRI31_HUMAN (Q9BZY9) Tripartite motif protein 31| Length = 425 Score = 36.6 bits (83), Expect = 0.054 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAX---KKCPTCR 352 CP+C++ L CGH FC KCI + KCP C+ Sbjct: 16 CPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCK 57
>TRI17_MOUSE (Q7TPM3) Tripartite motif protein 17| Length = 477 Score = 36.6 bits (83), Expect = 0.054 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 12/52 (23%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCI-----KASIQAXKK-------CPTCR 352 +C +C++ + T CGH FC +CI K ++ KK CP CR Sbjct: 15 TCSICLDYFTDPVMTACGHNFCRECIQMSWEKGKVKKGKKKQKGSFPCPECR 66
>CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24| Length = 216 Score = 36.6 bits (83), Expect = 0.054 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -3 Query: 501 VKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKK--CPTCRRK 346 VKE ++ F C +C ++ + T CGHIFC C +A KK C C ++ Sbjct: 146 VKE-KEDIPFKCVLCKSDYKSPIKTECGHIFCKACFLDRYKAKKKGTCFICHKE 198
>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5| protein 24) (Cell cycle control protein cwf24) Length = 533 Score = 36.2 bits (82), Expect = 0.070 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -3 Query: 495 EIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 E ++ F C +C + + T CGH FC +C +I +K PTC Sbjct: 245 EKKEDIPFVCLICKKDYRSPIATTCGHHFCEQC---AITRYRKTPTC 288
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 36.2 bits (82), Expect = 0.070 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXR 322 C +C + L T C H +C +CI+ + +CP C+ ++ S R Sbjct: 29 CYICKDLLNAPVRTQCDHTYCSQCIREFLLRDNRCPLCKTEVFESGLKR 77
>ATL2H_ARATH (Q6NKR1) RING-H2 finger protein ATL2H| Length = 254 Score = 36.2 bits (82), Expect = 0.070 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 13/78 (16%) Frame = -3 Query: 537 TPPKVAQAAPEPVKEIP---------KETKFSCPVCMNELVNASX----TICGHIFCXKC 397 TPP+ P ++ P K C +C++E + T+C H F C Sbjct: 71 TPPENTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNC 130 Query: 396 IKASIQAXKKCPTCRRKL 343 I + K CP CR +L Sbjct: 131 IDLWFELHKTCPVCRCEL 148
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 36.2 bits (82), Expect = 0.070 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQAXK--KCPTCRRKLT 340 +CP+C + CGH FC CI S ++ CP C+ LT Sbjct: 161 TCPLCRSLFKEPVILECGHNFCKHCIDKSWESASAFSCPECKEVLT 206
>ATL1B_ARATH (Q9LM69) RING-H2 finger protein ATL1B| Length = 197 Score = 36.2 bits (82), Expect = 0.070 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 8/73 (10%) Frame = -3 Query: 528 KVAQAAPEPV--KEIPKETKFS-CPVCMNELVNASXTI-----CGHIFCXKCIKASIQAX 373 KV Q+ P+ E P+ KF+ C +C+ E +A + CGH F CI + + Sbjct: 88 KVLQSLPKLTFSPESPESEKFAECAICLAEF-SAGDELRVLPQCGHGFHVACIDTWLGSH 146 Query: 372 KKCPTCRRKLTIS 334 CP+CR+ L ++ Sbjct: 147 SSCPSCRQILVVA 159
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 36.2 bits (82), Expect = 0.070 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = -3 Query: 513 APEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKA--SIQAXKKCPTCR 352 +P P + +E C VC + +A CGH FC C+ +Q CP C+ Sbjct: 8 SPGPSRSFKEE--LLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCK 61
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 36.2 bits (82), Expect = 0.070 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -3 Query: 543 NNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKK 367 +N PK + + CP+C++ N S C H FC +C++ + + Sbjct: 78 DNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAE 137 Query: 366 CPTCRR 349 CP C++ Sbjct: 138 CPLCKQ 143
>ATL3E_ARATH (Q9LUL6) Putative RING-H2 finger protein ATL3E| Length = 204 Score = 36.2 bits (82), Expect = 0.070 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = -3 Query: 468 CPVCMNELVNASXT----ICGHIFCXKCIKASIQAXKKCPTCRRKLTI 337 C VC++EL + C H F +CI + +Q+ CP CR+++ + Sbjct: 88 CVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCL 135
>ATL1C_ARATH (Q9SK92) RING-H2 finger protein ATL1C precursor (RING-H2 finger| protein ATL15) Length = 381 Score = 36.2 bits (82), Expect = 0.070 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = -3 Query: 468 CPVCMNELVNASXTI----CGHIFCXKCIKASIQAXKKCPTCRRKL 343 CPVC+NE + C H+F CI A +++ CP CR L Sbjct: 118 CPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANL 163
>TRIM2_MOUSE (Q9ESN6) Tripartite motif protein 2 (Neural activity-related RING| finger protein) Length = 744 Score = 36.2 bits (82), Expect = 0.070 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Frame = -3 Query: 510 PEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRR 349 P PV + C +C+ N C H FC +C++ I A CP CR+ Sbjct: 9 PSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQ 65
>TRIM2_HUMAN (Q9C040) Tripartite motif protein 2 (RING finger protein 86)| Length = 744 Score = 36.2 bits (82), Expect = 0.070 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Frame = -3 Query: 510 PEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK---KCPTCRR 349 P PV + C +C+ N C H FC +C++ I A CP CR+ Sbjct: 9 PSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQ 65
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 36.2 bits (82), Expect = 0.070 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -3 Query: 543 NNTPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTI-CGHIFCXKCIKASIQAXKK 367 +N PK + + CP+C++ N S C H FC +C++ + + Sbjct: 79 DNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAE 138 Query: 366 CPTCRR 349 CP C++ Sbjct: 139 CPLCKQ 144
>TRI17_RAT (Q9WV59) Tripartite motif protein 17 (Testis RING finger protein)| Length = 477 Score = 36.2 bits (82), Expect = 0.070 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 12/52 (23%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQAXK------------KCPTCR 352 +C +C++ + T CGH FC +CI+ S + K CP CR Sbjct: 15 TCSICLDYFTDPVMTACGHNFCRECIQMSWEKGKGKKGKKKQKGSFPCPECR 66
>ATL1R_ARATH (Q8LC69) RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8)| Length = 185 Score = 36.2 bits (82), Expect = 0.070 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Frame = -3 Query: 531 PKVAQAAPEPVKEIPKETKFSCPVCMNELVNASXTI----CGHIFCXKCIKASIQAXKKC 364 PK+ + P P E C +C+ E CGH F CI + + C Sbjct: 87 PKLTYSPDSP----PAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSC 142 Query: 363 PTCRRKLTIS 334 P+CR+ L ++ Sbjct: 143 PSCRQILVVT 152
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 35.8 bits (81), Expect = 0.092 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKC---IKASIQAXKKCPTCRR 349 E CP+C+ CGH +C C + + A +CP CR+ Sbjct: 11 EDWLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQ 58
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 35.8 bits (81), Expect = 0.092 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = -3 Query: 468 CPVCMNEL---VNASXTICGHIFCXKCIKASIQAXKKCPTCRRKL 343 C VC +E+ + C H FC C+K +Q CP C KL Sbjct: 116 CAVCTDEIAPHLRCDTFPCMHRFCIPCMKTWMQLRNTCPLCNAKL 160
>RAG1_HUMAN (P15918) V(D)J recombination-activating protein 1 (RAG-1) (RING| finger protein 74) Length = 1043 Score = 35.8 bits (81), Expect = 0.092 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCR 352 SC +C + L + T C H+FC CI ++ CP+CR Sbjct: 292 SCQICEHILADPVETNCKHVFCRVCILRCLKVMGSYCPSCR 332
>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 35.8 bits (81), Expect = 0.092 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 6/63 (9%) Frame = -3 Query: 522 AQAAPEPVKEIP-----KETKFSCPVCMNELVNA-SXTICGHIFCXKCIKASIQAXKKCP 361 AQ + E VK+ E +C +C + L + S C H FC C ++ CP Sbjct: 280 AQTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCP 339 Query: 360 TCR 352 TCR Sbjct: 340 TCR 342
>ATL3B_ARATH (Q8RXX9) RING-H2 finger protein ATL3B precursor (RING-H2 finger| protein ATL6) Length = 398 Score = 35.8 bits (81), Expect = 0.092 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = -3 Query: 477 KFSCPVCMNELVNASXTI----CGHIFCXKCIKASIQAXKKCPTCRRKL 343 + C +C+NE + C H+F CI A ++A CP CR L Sbjct: 125 ELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL 173
>PEX12_RAT (O88177) Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome| assembly factor 3) (PAF-3) Length = 359 Score = 35.8 bits (81), Expect = 0.092 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Frame = -3 Query: 537 TPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASX-TICGHIFCXKCIKASIQAXKKCP 361 TPP + + K CP+C VN + G++FC +C+ +++ + CP Sbjct: 281 TPPPPVHLDYNSDSPLLPKMKTVCPLCRKARVNDTVLATSGYVFCYRCVFNYVRSHQACP 340 Query: 360 TCRRKLTISNFXRVYLP 310 + + ++Y P Sbjct: 341 ITGYPTEVQHLIKLYSP 357
>PEX12_MOUSE (Q8VC48) Peroxisome assembly protein 12 (Peroxin-12)| Length = 359 Score = 35.8 bits (81), Expect = 0.092 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Frame = -3 Query: 537 TPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASX-TICGHIFCXKCIKASIQAXKKCP 361 TPP + + K CP+C VN + G++FC +C+ +++ + CP Sbjct: 281 TPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFNYVRSHQACP 340 Query: 360 TCRRKLTISNFXRVYLP 310 + + ++Y P Sbjct: 341 ITGYPTEVQHLIKLYSP 357
>PEX12_HUMAN (O00623) Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome| assembly factor 3) (PAF-3) Length = 359 Score = 35.8 bits (81), Expect = 0.092 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Frame = -3 Query: 537 TPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASX-TICGHIFCXKCIKASIQAXKKCP 361 TPP + + K CP+C VN + G++FC +C+ +++ + CP Sbjct: 281 TPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFHYVRSHQACP 340 Query: 360 TCRRKLTISNFXRVYLP 310 + + ++Y P Sbjct: 341 ITGYPTEVQHLIKLYSP 357
>PEX12_CRILO (Q9ET67) Peroxisome assembly protein 12 (Peroxin-12)| Length = 359 Score = 35.8 bits (81), Expect = 0.092 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Frame = -3 Query: 537 TPPKVAQAAPEPVKEIPKETKFSCPVCMNELVNASX-TICGHIFCXKCIKASIQAXKKCP 361 TPP + + K CP+C VN + G++FC +C+ +++ + CP Sbjct: 281 TPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFNYVRSHQACP 340 Query: 360 TCRRKLTISNFXRVYLP 310 + + ++Y P Sbjct: 341 ITGYPTEVQHLIKLYSP 357
>ATL4I_ARATH (O49691) Putative RING-H2 finger protein ATL4I| Length = 289 Score = 35.8 bits (81), Expect = 0.092 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Frame = -3 Query: 501 VKEIPKETK-FSCPVCMNEL----VNASXTICGHIFCXKCIKASIQAXKKCPTCRRKL 343 VK++ +E C +C+ E V T C H+F +CI ++ + CP CRR L Sbjct: 98 VKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDL 155
>TRI18_MUSSP (P82457) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 35.8 bits (81), Expect = 0.092 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 13/63 (20%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIK-------------ASIQAXKKCPTCRRKL 343 E++ +CP+C+ L + C H C C SI A +CPTCR + Sbjct: 5 ESELTCPICLELLEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAF-QCPTCRHVI 63 Query: 342 TIS 334 T+S Sbjct: 64 TLS 66
>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc Length = 793 Score = 35.8 bits (81), Expect = 0.092 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK-KCPTCRRKLTISNFXRVYLPM 307 E F C C + T+C H C C+ S +A CP CR L S +V P+ Sbjct: 719 EETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPL 778
>LNX1_HUMAN (Q8TBB1) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)| (Ligand of Numb-protein X 1) Length = 728 Score = 35.8 bits (81), Expect = 0.092 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 C +C+ L++ T CGH +C C+ + CP R+ L + + Sbjct: 41 CHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPMDRKPLVLQH 86
>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)| Length = 275 Score = 35.8 bits (81), Expect = 0.092 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = -3 Query: 522 AQAAP-EPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRK 346 A+ AP EP C VC+ +A C H FC C++ KCPTCR+ Sbjct: 208 AETAPGEPAPAFAGSEALECKVCLERQRDAVLLPCRH-FCV-CMQCYFALDGKCPTCRQ- 264 Query: 345 LTISNFXRVYL 313 +++F ++++ Sbjct: 265 -DVADFIKIFV 274
>TRC8_DROME (Q7KRW1) Protein TRC8 homolog| Length = 809 Score = 35.4 bits (80), Expect = 0.12 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 C +C E+ +A T C H F C++ + +CP C Sbjct: 621 CAICYQEMYSAKITRCRHFFHGVCLRKWLYVQDRCPLC 658
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 35.4 bits (80), Expect = 0.12 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 10/66 (15%) Frame = -3 Query: 474 FSCPVCMNELVN----ASXTICGHIFCXKCIKASI--QAXKK----CPTCRRKLTISNFX 325 F C +C E + S T C H FC C+ I Q KK CP CR ++ +N Sbjct: 856 FECAICTTECIEPLSAVSITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPISEANVL 915 Query: 324 RVYLPM 307 ++ P+ Sbjct: 916 KLKEPI 921
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 35.4 bits (80), Expect = 0.12 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -3 Query: 468 CPVCMNEL-VNASXTICGHIFCXKCIKASIQA-XKKCPTCRRKLTISNFXRVYL 313 C VC E + ++CGH FC +CI+ I+ ++CP C R S+ ++L Sbjct: 627 CSVCNFERWKDRIISLCGHGFCYQCIQKRIETRQRRCPICGRGFGASDVIPIHL 680
>TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) (RING finger protein 147) Length = 630 Score = 35.4 bits (80), Expect = 0.12 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = -3 Query: 489 PKETKFSCPVCMNELVNASXTICGHIFCXKCIKA--SIQAXK-KCPTCR 352 P + SC +C+ T CGH FC C+ ++Q CP CR Sbjct: 6 PLAEELSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCR 54
>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)| Length = 488 Score = 35.4 bits (80), Expect = 0.12 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCI----KASI---QAXKKCPTCR 352 +CP+C+ L CGH FC CI + S+ + + CP C+ Sbjct: 14 TCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ 60
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 35.4 bits (80), Expect = 0.12 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIK---ASIQAXKKCPTCRR 349 + + SC VC+ L CGH FC CI ++ CP CR+ Sbjct: 24 QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 35.4 bits (80), Expect = 0.12 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIK---ASIQAXKKCPTCRR 349 + + SC VC+ L CGH FC CI ++ CP CR+ Sbjct: 24 QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 35.4 bits (80), Expect = 0.12 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIK---ASIQAXKKCPTCRR 349 + + SC VC+ L CGH FC CI ++ CP CR+ Sbjct: 24 QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>RAG1_MOUSE (P15919) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1040 Score = 35.4 bits (80), Expect = 0.12 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTCR 352 SC +C + L + T C H+FC CI ++ CP+CR Sbjct: 289 SCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCR 329
>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1041 Score = 35.4 bits (80), Expect = 0.12 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQAXK-KCPTC 355 SC +C + L + T C H+FC CI + I+ CP+C Sbjct: 288 SCQICEHILADPVETTCRHLFCRTCILSCIRVMGCYCPSC 327
>CM007_MOUSE (Q8K2Y0) Protein C13orf7 homolog| Length = 722 Score = 35.4 bits (80), Expect = 0.12 Identities = 13/47 (27%), Positives = 23/47 (48%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 +C +C+ ++ H+FC CI ++ +CP CR +T N Sbjct: 17 TCHICLGKVRQPVVCTNNHVFCSICIDLWLKNNSQCPACRVPITPEN 63
>TRI48_HUMAN (Q8IWZ4) Tripartite motif protein 48 (RING finger protein 101)| Length = 375 Score = 35.4 bits (80), Expect = 0.12 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKC 397 + + +CP+CMN ++ CGH FC C Sbjct: 10 QRELTCPICMNYFIDPVTIDCGHSFCRPC 38
>ATL5B_ARATH (Q9FLC6) Putative RING-H2 finger protein ATL5B precursor| Length = 176 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 7/61 (11%) Frame = -3 Query: 504 PVKEIPKETKFS---CPVCMNELVNASXTI----CGHIFCXKCIKASIQAXKKCPTCRRK 346 PV E K C +C+ + V C H F KCI + + CPTCR+ Sbjct: 98 PVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQS 157 Query: 345 L 343 L Sbjct: 158 L 158
>CHFR_HUMAN (Q96EP1) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 35.0 bits (79), Expect = 0.16 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -3 Query: 525 VAQAAPEPVKEIPKETKFSCPVCMNELVNA-SXTICGHIFCXKCIKASIQAXKKCPTCR 352 V AA +P K E +C +C + L + S C H FC C ++ CPTCR Sbjct: 288 VRAAAGKPDK---MEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCR 343
>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47| Length = 641 Score = 35.0 bits (79), Expect = 0.16 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -3 Query: 474 FSCPVCMNELVNASXTICGHIFCXKCIKA 388 FSCP+C+ L CGH FC C+ A Sbjct: 7 FSCPICLEPLREPVTLPCGHNFCLACLGA 35
>BIRC3_HUMAN (Q13489) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (HIAP1) (HIAP-1) (C-IAP2) (TNFR2-TRAF signaling complex protein 1) (IAP homolog C) (Apoptosis inhibitor 2) (API2) Length = 604 Score = 35.0 bits (79), Expect = 0.16 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 8/73 (10%) Frame = -3 Query: 507 EPVKEIPKETKF-------SCPVCMNELVNASXTICGH-IFCXKCIKASIQAXKKCPTCR 352 E V ++P E + +C VCM++ V+ CGH + C C + +KCP CR Sbjct: 537 EDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDC----APSLRKCPICR 592 Query: 351 RKLTISNFXRVYL 313 TI R +L Sbjct: 593 S--TIKGTVRTFL 603
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 35.0 bits (79), Expect = 0.16 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -3 Query: 474 FSCPVCMNELVNASXTICGHIFCXKCIKA 388 FSCP+C+ L CGH FC C+ A Sbjct: 7 FSCPICLEPLREPVTLPCGHNFCLACLGA 35
>TRI17_HUMAN (Q9Y577) Tripartite motif protein 17 (Testis RING finger protein)| (RING finger protein 16) Length = 477 Score = 35.0 bits (79), Expect = 0.16 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 12/66 (18%) Frame = -3 Query: 513 APEPVKEIPKETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXK------------ 370 A E +++ +E +C +C++ + T CGH FC CI+ S + + Sbjct: 3 AVELARKLQEEA--TCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60 Query: 369 KCPTCR 352 CP CR Sbjct: 61 PCPECR 66
>LNX1_MOUSE (O70263) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)| (Ligand of Numb-binding protein 1) (Ligand of Numb-protein X 1) Length = 728 Score = 35.0 bits (79), Expect = 0.16 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = -3 Query: 468 CPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCRRKLTISN 331 C +C+ L++ T CGH +C C+ + CP R+ + + + Sbjct: 45 CHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPVDRKPVVLQH 90
>PJA1_MOUSE (O55176) Ubiquitin protein ligase Praja1 (EC 6.3.2.-)| Length = 605 Score = 34.7 bits (78), Expect = 0.21 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%) Frame = -3 Query: 468 CPVCMNELVN---ASXTICGHIFCXKCIKASIQAXKKCPTCR 352 CP+C +E V A+ C H F C+ +Q CP CR Sbjct: 531 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 572
>PJA1_HUMAN (Q8NG27) Ubiquitin protein ligase Praja1 (EC 6.3.2.-) (RING finger| protein 70) Length = 643 Score = 34.7 bits (78), Expect = 0.21 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%) Frame = -3 Query: 468 CPVCMNELVN---ASXTICGHIFCXKCIKASIQAXKKCPTCR 352 CP+C +E V A+ C H F C+ +Q CP CR Sbjct: 595 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636
>ATL1E_ARATH (Q9C7E9) Putative RING-H2 finger protein ATL1E| Length = 336 Score = 34.7 bits (78), Expect = 0.21 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Frame = -3 Query: 498 KEIPKETKFSCPVCMNELVNASXTIC----GHIFCXKCIKASIQAXKKCPTCR 352 + +P CP+C++E + C H F +CI ++ CP CR Sbjct: 280 RRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 332
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 353 Score = 34.7 bits (78), Expect = 0.21 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -3 Query: 468 CPVCMNELVNASX-TICGHIFCXKCIKASIQAXKKCPTC 355 C +C L++A+ T C H FC CI +CP C Sbjct: 137 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKC 175
>TRAF5_HUMAN (O00463) TNF receptor-associated factor 5 (RING finger protein 84)| Length = 557 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 E ++ C C + L N T CGH FC CI S++ P C Sbjct: 40 EERYKCAFCHSVLHNPHQTGCGHRFCQHCI-LSLRELNTVPIC 81
>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) (RAD18 homolog) Length = 387 Score = 34.7 bits (78), Expect = 0.21 Identities = 13/44 (29%), Positives = 19/44 (43%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTCR 352 ++ C +C T C H FC CI+ ++ CP CR Sbjct: 24 DSSLRCLICHEYFRAPLITSCSHTFCSFCIRDYLREHPMCPACR 67
>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein| 134) Length = 351 Score = 34.7 bits (78), Expect = 0.21 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -3 Query: 468 CPVCMNELVNASX-TICGHIFCXKCIKASIQAXKKCPTC 355 C +C L++A+ T C H FC CI +CP C Sbjct: 135 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKC 173
>ZN364_MOUSE (Q9D0C1) Zinc finger protein 364 (Rabring 7)| Length = 305 Score = 34.7 bits (78), Expect = 0.21 Identities = 20/75 (26%), Positives = 26/75 (34%), Gaps = 8/75 (10%) Frame = -3 Query: 543 NNTPP-----KVAQAAPEPVKEIPKETKFSCPVCMNELV---NASXTICGHIFCXKCIKA 388 N PP K+ V + T CPVC + C H F CI Sbjct: 199 NTGPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVP 258 Query: 387 SIQAXKKCPTCRRKL 343 ++ CP CR+ L Sbjct: 259 WLELHDTCPVCRKSL 273
>RN139_HUMAN (Q8WU17) RING finger protein 139 (Translocation in renal carcinoma| on chromosome 8) Length = 664 Score = 34.7 bits (78), Expect = 0.21 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Frame = -3 Query: 537 TPPKVAQAAPEPVKEIPKETKFSCPVCMNELV-NASXTICGHIFCXKCIKASIQAXKKCP 361 T K + PE +E C +C +E +A T C H F C++ + CP Sbjct: 524 TAVKKINSLPEIKGSRLQEINDVCAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCP 583 Query: 360 TCRRKLTISN 331 C +K+ I + Sbjct: 584 MCHQKVYIED 593
>RAG1_PIG (Q867B5) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1043 Score = 34.7 bits (78), Expect = 0.21 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQA-XKKCPTC 355 SC +C + L + T C H+FC CI ++ CP+C Sbjct: 292 SCQICEHILADPVETSCKHVFCRICILRCLKVMGSSCPSC 331
>ATL5H_ARATH (Q8LGA5) RING-H2 finger protein ATL5H precursor| Length = 368 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = -3 Query: 468 CPVCMNELVNASXTI----CGHIFCXKCIKASIQAXKKCPTCRRKL 343 C +C+NE + C H+F CI A +Q CP CR L Sbjct: 124 CAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL 169
>ATL2C_ARATH (Q9ZV53) Putative RING-H2 finger protein ATL2C| Length = 423 Score = 34.7 bits (78), Expect = 0.21 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 4/96 (4%) Frame = -3 Query: 486 KETKFSCPVCMNELVNASXTI----CGHIFCXKCIKASIQAXKKCPTCRRKLTISNFXRV 319 K + F CPVC+ E C H F +CI + + CP CR L +S F Sbjct: 120 KISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNL-LSGF--- 175 Query: 318 YLPMAXN*NLSSHSWSIXADGX*LKPIQPFLEHXSR 211 + + NLSS + + + P LE S+ Sbjct: 176 ----SSHHNLSSSYLLVLESEQSSRDMVPVLESNSQ 207
>TRIM6_MOUSE (Q8BGE7) Tripartite motif protein 6| Length = 488 Score = 34.7 bits (78), Expect = 0.21 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 7/47 (14%) Frame = -3 Query: 471 SCPVCMNELVNASXTICGHIFCXKCIKASIQ-------AXKKCPTCR 352 +CP+C+ L CGH FC CI + CP CR Sbjct: 14 TCPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFGQGGRSSCPVCR 60
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 34.7 bits (78), Expect = 0.21 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Frame = -3 Query: 483 ETKFSCPVCMNELVNASXTICGHIFCXKC---IKASIQAXKKCPTCRRKLTISN 331 + + CP+C+ CGH +C C + + + CP CR+ + S+ Sbjct: 11 QDQLQCPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVDCSS 64
>ATL2N_ARATH (O22255) RING-H2 finger protein ATL2N| Length = 227 Score = 34.7 bits (78), Expect = 0.21 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Frame = -3 Query: 489 PKETKFSCPVCMNELVNASX----TICGHIFCXKCIKASIQAXKKCPTCR 352 P E K C VC++E CGH F CI ++ CP CR Sbjct: 101 PPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCR 150
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)| Length = 322 Score = 34.7 bits (78), Expect = 0.21 Identities = 14/44 (31%), Positives = 18/44 (40%) Frame = -3 Query: 486 KETKFSCPVCMNELVNASXTICGHIFCXKCIKASIQAXKKCPTC 355 +E F C +C N T C H FC C +A +C C Sbjct: 250 EEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYIC 293
>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 352 Score = 34.7 bits (78), Expect = 0.21 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -3 Query: 468 CPVCMNELVNASX-TICGHIFCXKCIKASIQAXKKCPTC 355 C +C L++A+ T C H FC CI +CP C Sbjct: 136 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKC 174 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,003,296 Number of Sequences: 219361 Number of extensions: 1425243 Number of successful extensions: 4405 Number of sequences better than 10.0: 453 Number of HSP's better than 10.0 without gapping: 4161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4333 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
