>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  103 bits (52), Expect = 6e-19
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                            
Query: 311      gggaggtanacccggnggaagttgcttatggtcaacttcctccggcaggtagggcacnnn 370
                ||||| || || ||| |||||||| | ||||||| ||||||||||||||||||||||   
Sbjct: 40114023 gggagatacacgcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttc 40113964

                                                                            
Query: 371      nnnngagcctggatggaggccttgatgcacttntggcaaaaaatgtggccgcaaatggtc 430
                    |||||||||| ||||||||||| ||||  | |||||||||||| ||||| ||||||
Sbjct: 40113963 ttctgagcctggattgaggccttgatacactgcttgcaaaaaatgtgaccgcagatggtc 40113904

                                             
Query: 431      natgatgcattgaccagctcattcatgca 459
                 |||| |  | ||||||||| ||||||||
Sbjct: 40113903 gatgacggttcgaccagctcgttcatgca 40113875

>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0678F11
          Length = 154292

 Score =  103 bits (52), Expect = 6e-19
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                         
Query: 311   gggaggtanacccggnggaagttgcttatggtcaacttcctccggcaggtagggcacnnn 370
             ||||| || || ||| |||||||| | ||||||| ||||||||||||||||||||||   
Sbjct: 57107 gggagatacacgcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttc 57048

                                                                         
Query: 371   nnnngagcctggatggaggccttgatgcacttntggcaaaaaatgtggccgcaaatggtc 430
                 |||||||||| ||||||||||| ||||  | |||||||||||| ||||| ||||||
Sbjct: 57047 ttctgagcctggattgaggccttgatacactgcttgcaaaaaatgtgaccgcagatggtc 56988

                                          
Query: 431   natgatgcattgaccagctcattcatgca 459
              |||| |  | ||||||||| ||||||||
Sbjct: 56987 gatgacggttcgaccagctcgttcatgca 56959

>dbj|AK105883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D05, full
           insert sequence
          Length = 1095

 Score =  103 bits (52), Expect = 6e-19
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggaggtanacccggnggaagttgcttatggtcaacttcctccggcaggtagggcacnnn 370
           ||||| || || ||| |||||||| | ||||||| ||||||||||||||||||||||   
Sbjct: 922 gggagatacacgcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttc 863

                                                                       
Query: 371 nnnngagcctggatggaggccttgatgcacttntggcaaaaaatgtggccgcaaatggtc 430
               |||||||||| ||||||||||| ||||  | |||||||||||| ||||| ||||||
Sbjct: 862 ttctgagcctggattgaggccttgatacactgcttgcaaaaaatgtgaccgcagatggtc 803

                                        
Query: 431 natgatgcattgaccagctcattcatgca 459
            |||| |  | ||||||||| ||||||||
Sbjct: 802 gatgacggttcgaccagctcgttcatgca 774

>dbj|AK067058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M15, full
            insert sequence
          Length = 1243

 Score =  103 bits (52), Expect = 6e-19
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                        
Query: 311  gggaggtanacccggnggaagttgcttatggtcaacttcctccggcaggtagggcacnnn 370
            ||||| || || ||| |||||||| | ||||||| ||||||||||||||||||||||   
Sbjct: 1005 gggagatacacgcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttc 946

                                                                        
Query: 371  nnnngagcctggatggaggccttgatgcacttntggcaaaaaatgtggccgcaaatggtc 430
                |||||||||| ||||||||||| ||||  | |||||||||||| ||||| ||||||
Sbjct: 945  ttctgagcctggattgaggccttgatacactgcttgcaaaaaatgtgaccgcagatggtc 886

                                         
Query: 431  natgatgcattgaccagctcattcatgca 459
             |||| |  | ||||||||| ||||||||
Sbjct: 885  gatgacggttcgaccagctcgttcatgca 857

>dbj|AK059108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D10, full
           insert sequence
          Length = 1147

 Score =  103 bits (52), Expect = 6e-19
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggaggtanacccggnggaagttgcttatggtcaacttcctccggcaggtagggcacnnn 370
           ||||| || || ||| |||||||| | ||||||| ||||||||||||||||||||||   
Sbjct: 922 gggagatacacgcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttc 863

                                                                       
Query: 371 nnnngagcctggatggaggccttgatgcacttntggcaaaaaatgtggccgcaaatggtc 430
               |||||||||| ||||||||||| ||||  | |||||||||||| ||||| ||||||
Sbjct: 862 ttctgagcctggattgaggccttgatacactgcttgcaaaaaatgtgaccgcagatggtc 803

                                        
Query: 431 natgatgcattgaccagctcattcatgca 459
            |||| |  | ||||||||| ||||||||
Sbjct: 802 gatgacggttcgaccagctcgttcatgca 774

>ref|XM_463621.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1596

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggaggtanacccggnggaagttgcttatggtcaacttcctccggcaggtagggcacnnn 370
           ||||| || || ||| |||||||| | ||||||| ||||||||||||||||||||||   
Sbjct: 146 gggagatacacgcggtggaagttgttcatggtcagcttcctccggcaggtagggcacttc 87

                                                                       
Query: 371 nnnngagcctggatggaggccttgatgcacttntggcaaaaaatgtggccgcaaatggtc 430
               |||||||||| ||||||||||| ||||  | |||||||||||| ||||| ||||||
Sbjct: 86  ttctgagcctggattgaggccttgatacactgcttgcaaaaaatgtgaccgcagatggtc 27

                                     
Query: 431 natgatgcattgaccagctcattcat 456
            |||| |  | ||||||||| |||||
Sbjct: 26  gatgacggttcgaccagctcgttcat 1

>emb|AL353732.14| Human DNA sequence from clone RP11-354P17 on chromosome 9 Contains the
              IFNA6 gene for interferon, alpha 6, the IFNA13 gene for
              interferon, alpha 13, the IFNA2 gene for interferon, alpha
              2, the IFNA8 gene for interferon, alpha 8, an interferon,
              omega 1 (IFNW1) pseudogene, the IFNA1 gene for interferon,
              alpha 1, 4 interferon pseudogenes, the 3' end of a novel
              gene and a CpG island, complete sequence
          Length = 173211

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 193    aaaagggtcacagctgccacggctntaat 221
              |||||||||||||||| ||||||| ||||
Sbjct: 103492 aaaagggtcacagctgacacggctataat 103464

>emb|CR388451.1| Gallus gallus finished cDNA, clone ChEST586i7
          Length = 710

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 440 ttgaccagctcattcatgcaaa 461
           ||||||||||||||||||||||
Sbjct: 243 ttgaccagctcattcatgcaaa 264

>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 70     gtatgcagattggtaatcacg 90
              |||||||||||||||||||||
Sbjct: 923500 gtatgcagattggtaatcacg 923520

>gb|U59229.1|RMU59229 Rhizobium meliloti megaplasmid pRmeSU47b phosphate transport system
           PhoC (phoC), PhoD precursor (phoD), PhoE (phoE), and
           PhoT (phoT) genes, complete cds
          Length = 5705

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 70  gtatgcagattggtaatcacg 90
           |||||||||||||||||||||
Sbjct: 898 gtatgcagattggtaatcacg 878

>gb|AC159239.3| Mus musculus BAC clone RP24-496E14 from chromosome 13, complete
             sequence
          Length = 206286

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 497   ttcacaggttcaggggcagcctgggccac 525
             |||||||||||| || |||||||||||||
Sbjct: 73630 ttcacaggttcaaggccagcctgggccac 73658

>gb|AC124327.9| Mus musculus chromosome 8, clone RP24-490I13, complete sequence
          Length = 141781

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 499   cacaggttcaggggcagcctgggc 522
             |||||||||| |||||||||||||
Sbjct: 58128 cacaggttcaagggcagcctgggc 58151

>gb|AC093255.2| Homo sapiens chromosome 5 clone RP11-181G6, complete sequence
          Length = 95597

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    gtctcaagcacttgttaaat 109
             ||||||||||||||||||||
Sbjct: 47766 gtctcaagcacttgttaaat 47747

>gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 183357

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    aagttgcttatggtcaactt 348
              ||||||||||||||||||||
Sbjct: 123644 aagttgcttatggtcaactt 123625

>gb|AC132365.4| Mus musculus BAC clone RP23-459M5 from 6, complete sequence
          Length = 162524

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 490   gatctccttcacaggttcag 509
             ||||||||||||||||||||
Sbjct: 93925 gatctccttcacaggttcag 93944


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,380,212
Number of Sequences: 3902068
Number of extensions: 3380212
Number of successful extensions: 56821
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56776
Number of HSP's gapped (non-prelim): 39
length of query: 581
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 558
effective length of database: 17,143,297,704
effective search space: 9565960118832
effective search space used: 9565960118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)