ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009602.1| Triticum aestivum clone wre1n.pk0080.f8:fis, full... 862 0.0
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
3dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
4dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
5dbj|AK106976.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
6gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 44 0.54
7emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC... 44 0.54
8gb|AC069540.6| Homo sapiens chromosome 10 clone RP11-344L13, com... 44 0.54
9gb|U52002.2| Caenorhabditis elegans cosmid F08B4, complete sequence 42 2.1
10ref|XM_533013.2| PREDICTED: Canis familiaris similar to Transcri... 42 2.1
11gb|AC003108.1|HUAC003108 Human Chromosome 16 BAC clone CIT987SK-... 42 2.1
12gb|AE004159.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 42 2.1
13emb|AL596449.4| Human DNA sequence from clone RP11-363J24 on chr... 42 2.1
14emb|AL357972.18| Human DNA sequence from clone RP5-895L2 on chro... 42 2.1
15gb|AC127891.2| Homo sapiens 12 BAC RP11-91I24 (Roswell Park Canc... 42 2.1
16gb|AC129031.1| Homo sapiens 12 BAC RP11-106H17 (Roswell Park Can... 42 2.1
17gb|AC087274.8| Homo sapiens chromosome 8, clone RP11-681J6, comp... 42 2.1
18gb|AC098479.2| Homo sapiens chromosome 3 clone RP11-80H18, compl... 42 2.1
19gb|AC012621.8| Homo sapiens chromosome 16 clone CTD-2055J8, comp... 42 2.1
20gb|AC137936.3| Homo sapiens chromosome 3 clone RP11-456N14, comp... 42 2.1
21emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-8... 42 2.1
22gb|AC148053.3| Carollia perspicillata clone 594J14, complete seq... 42 2.1
23dbj|AB209613.1| Homo sapiens mRNA for deoxyribonuclease I-like 3... 42 2.1
24gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 42 2.1
25gb|AC161474.4| Pan troglodytes BAC clone CH251-488B17 from chrom... 40 8.4
26ref|XM_612660.2| PREDICTED: Bos taurus similar to Transcription ... 40 8.4
27gb|AC101787.11| Mus musculus chromosome 1, clone RP24-147F6, com... 40 8.4
28gb|AC146002.2| Pan troglodytes BAC clone RP43-153B17 from 7, com... 40 8.4
29gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosom... 40 8.4
30gb|AC002127.1| Homo sapiens BAC clone CTA-305H12 from 7, complet... 40 8.4
31emb|Z82217.1|HS78B3 Human DNA sequence from clone RP1-78B3 on ch... 40 8.4
32emb|AL356259.11| Human DNA sequence from clone RP11-385E5 on chr... 40 8.4
33emb|AL162721.11| Human DNA sequence from clone RP4-549K21 on chr... 40 8.4
34gb|AC162899.5| Mus musculus chromosome 1, clone RP24-222G3, comp... 40 8.4
35emb|AL645609.21| Mouse DNA sequence from clone RP23-432O10 on ch... 40 8.4
36gb|AC011353.5| Homo sapiens chromosome 5 clone CTC-328A6, comple... 40 8.4
37gb|U39674.1| Caenorhabditis elegans cosmid C06E2, complete sequence 40 8.4
38gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete seq... 40 8.4
39gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete s... 40 8.4
40gb|AC083813.29| Homo sapiens 12q BAC RP11-304C10 (Roswell Park C... 40 8.4
41gb|AC163762.4| Pan troglodytes BAC clone CH251-176O2 from chromo... 40 8.4
42gb|AC009708.11| Homo sapiens chromosome 8, clone RP11-318G5, com... 40 8.4
43gb|AC091906.3| Homo sapiens chromosome 5 clone RP11-193P20, comp... 40 8.4
44gb|AC156035.5| Mus musculus BAC clone RP23-302M20 from chromosom... 40 8.4
45gb|DQ027001.1| Homo sapiens ribonucleotide reductase M2 B (TP53 ... 40 8.4
46gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G... 40 8.4
47gb|AC016748.3| Homo sapiens BAC clone RP11-494M7 from 2, complet... 40 8.4
48gb|AC004615.1|AC004615 Homo sapiens BAC clone GS1-405L21 from 5p... 40 8.4
49emb|AL445885.1|CNS07EES Human chromosome 14 DNA sequence BAC C-2... 40 8.4
50emb|AL352976.3|CNS05TBV Human chromosome 14 DNA sequence BAC R-4... 40 8.4
51emb|CT030154.8| Mouse DNA sequence from clone RP23-387H3 on chro... 40 8.4
52emb|BX088570.6| Mouse DNA sequence from clone RP23-292J1 on chro... 40 8.4
53dbj|AP004925.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 8.4
54gb|AC156638.2| Mus musculus BAC clone RP24-255L24 from chromosom... 40 8.4
55dbj|AP002907.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.4
56emb|AL645535.16| Mouse DNA sequence from clone RP23-145G23 on ch... 40 8.4
57emb|AL670680.6| Mouse DNA sequence from clone RP23-314D24 on chr... 40 8.4 
>gb|BT009602.1| Triticum aestivum clone wre1n.pk0080.f8:fis, full insert mRNA
           sequence
          Length = 899

 Score =  862 bits (435), Expect = 0.0
 Identities = 568/608 (93%), Gaps = 12/608 (1%)
 Strand = Plus / Minus

                                                                       
Query: 13  gaacgtttttaaagtctggaaactgtaacaagatccactctacatcgacactgcattaat 72
           ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 848 gaacgttttcaaagtctggaaactgtaacaagatccactctacattgacactgcattaat 789

                                                                       
Query: 73  taatcctctcaaaaacagaa-gaaaaaatgattaaactggcactgcatgcattcgggcat 131
           |||||| ||| ||||||||| ||||||| || ||||||||||||||||    ||||||||
Sbjct: 788 taatcccctcgaaaacagaaagaaaaaaggactaaactggcactgcat----tcgggcat 733

                                                                       
Query: 132 gcatgtggacaggtacacaagaactcaaaacaatgagctcccattccattctgtcgcacg 191
           | ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 732 gtatgcggacaggtacacaagaactcaaaacagtgagctcccattctattctgtcgcacg 673

                                                                       
Query: 192 ttctactggctatggacacttgttttcatcagacatgactgagagcttgctgcatcctca 251
            |||| |||||||||||||||||||||| | ||||     ||||||||||||||||| ||
Sbjct: 672 ctctattggctatggacacttgttttcagctgaca-----gagagcttgctgcatcccca 618

                                                                       
Query: 252 tctgctgaaatctgcattctcccttcactagtcgatgggcacttccacctccattttcag 311
           ||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||
Sbjct: 617 tctgctgaaatctgcatccgcccttcactagtcgatgggcacttccacctccatcttcag 558

                                                                       
Query: 312 gccagggtggtcgatgatcgtcacaaaatcttctaatgatagagtggaatcccgtgtgta 371
           ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 557 gccagtgtggccgatgatcgtcacaaaatcttctaatgatagagtggaatcccgtgtata 498

                                                                       
Query: 372 cccagcttcttccaacacctttgttagtacttgctctctttgttgctctgacatggatga 431
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 497 cccagcttcttccaacacctttgttagtacttgctctctttgtttctctgacatggatga 438

                                                                       
Query: 432 gcccgttaggtcccgtaaaacctctaccaggtccttgaagcttactttccccttgccatc 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gcccgttaggtcccgtaaaacctctaccaggtccttgaagcttactttccccttgccatc 378

                                                                       
Query: 492 aatgtcatacaccttaaacatcaactcaatcttttgctgaaagctggcccttgtgctgga 551
           |||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||| ||
Sbjct: 377 aatgtcatacaccttaaatatgaactcaatcttttgctgaaggctggcccttgcgct-ga 319

                                                                       
Query: 552 aggtagagagaaacgaaacaaattcctttgaagttcaatccatcaaccatacgtagcaac 611
           ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 318 aggtagagagaaaagaaacaaattcc-ttgaagttcaatccatcaaccatacgtagcagc 260

                   
Query: 612 ctctggga 619
           ||||||||
Sbjct: 259 ctctggga 252
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  123 bits (62), Expect = 7e-25
 Identities = 92/102 (90%)
 Strand = Plus / Plus

                                                                            
Query: 405      ctctctttgttgctctgacatggatgagcccgttaggtcccgtaaaacctctaccaggtc 464
                ||||||||||| ||||| |||| |||| || ||| ||||||| |||||||||||||||||
Sbjct: 34226789 ctctctttgttcctctgtcatgaatgaccctgtttggtcccgcaaaacctctaccaggtc 34226848

                                                          
Query: 465      cttgaagcttactttccccttgccatcaatgtcatacacctt 506
                 |||||| |||| |||||||||||||||||||||||||||||
Sbjct: 34226849 tttgaaggttaccttccccttgccatcaatgtcatacacctt 34226890



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 89/101 (88%), Gaps = 2/101 (1%)
 Strand = Plus / Plus

                                                                            
Query: 515      actcaatcttttgctgaaagctggcccttgtgctggaaggtagagagaaacgaaacaaat 574
                |||||||||||||||||| ||||||| |||  ||| ||||||||||| || |||||||| 
Sbjct: 34227017 actcaatcttttgctgaacgctggcctttgcactg-aaggtagagaggaaggaaacaaaa 34227075

                                                         
Query: 575      tcctttgaagttcaatccatcaaccatacgtagcaacctct 615
                ||||| ||||||||  |||||||||||||| ||||||||||
Sbjct: 34227076 tcctt-gaagttcagcccatcaaccatacgcagcaacctct 34227115



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 277      cactagtcgatgggcacttccacctccattttcaggccagg 317
                |||||||| || ||||||||||||||||| || ||||||||
Sbjct: 34225791 cactagtcaataggcacttccacctccatctttaggccagg 34225831



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 336      aaaatcttctaatgatagagtggaatcccgtgtgtacccagcttcttccaacacctttgt 395
                ||||||||| || || || ||| |||||| |||||| |||||||||||||  || |||||
Sbjct: 34226004 aaaatcttccaaagaaagcgtgcaatcccttgtgtatccagcttcttccagtacatttgt 34226063

                       
Query: 396      tagtact 402
                || ||||
Sbjct: 34226064 tattact 34226070
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>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0032L17
          Length = 165808

 Score =  123 bits (62), Expect = 7e-25
 Identities = 92/102 (90%)
 Strand = Plus / Plus

                                                                          
Query: 405    ctctctttgttgctctgacatggatgagcccgttaggtcccgtaaaacctctaccaggtc 464
              ||||||||||| ||||| |||| |||| || ||| ||||||| |||||||||||||||||
Sbjct: 154303 ctctctttgttcctctgtcatgaatgaccctgtttggtcccgcaaaacctctaccaggtc 154362

                                                        
Query: 465    cttgaagcttactttccccttgccatcaatgtcatacacctt 506
               |||||| |||| |||||||||||||||||||||||||||||
Sbjct: 154363 tttgaaggttaccttccccttgccatcaatgtcatacacctt 154404



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 89/101 (88%), Gaps = 2/101 (1%)
 Strand = Plus / Plus

                                                                          
Query: 515    actcaatcttttgctgaaagctggcccttgtgctggaaggtagagagaaacgaaacaaat 574
              |||||||||||||||||| ||||||| |||  ||| ||||||||||| || |||||||| 
Sbjct: 154531 actcaatcttttgctgaacgctggcctttgcactg-aaggtagagaggaaggaaacaaaa 154589

                                                       
Query: 575    tcctttgaagttcaatccatcaaccatacgtagcaacctct 615
              ||||| ||||||||  |||||||||||||| ||||||||||
Sbjct: 154590 tcctt-gaagttcagcccatcaaccatacgcagcaacctct 154629



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 277    cactagtcgatgggcacttccacctccattttcaggccagg 317
              |||||||| || ||||||||||||||||| || ||||||||
Sbjct: 153305 cactagtcaataggcacttccacctccatctttaggccagg 153345



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                          
Query: 336    aaaatcttctaatgatagagtggaatcccgtgtgtacccagcttcttccaacacctttgt 395
              ||||||||| || || || ||| |||||| |||||| |||||||||||||  || |||||
Sbjct: 153518 aaaatcttccaaagaaagcgtgcaatcccttgtgtatccagcttcttccagtacatttgt 153577

                     
Query: 396    tagtact 402
              || ||||
Sbjct: 153578 tattact 153584
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>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0689B12
          Length = 154745

 Score =  123 bits (62), Expect = 7e-25
 Identities = 92/102 (90%)
 Strand = Plus / Plus

                                                                         
Query: 405   ctctctttgttgctctgacatggatgagcccgttaggtcccgtaaaacctctaccaggtc 464
             ||||||||||| ||||| |||| |||| || ||| ||||||| |||||||||||||||||
Sbjct: 62062 ctctctttgttcctctgtcatgaatgaccctgtttggtcccgcaaaacctctaccaggtc 62121

                                                       
Query: 465   cttgaagcttactttccccttgccatcaatgtcatacacctt 506
              |||||| |||| |||||||||||||||||||||||||||||
Sbjct: 62122 tttgaaggttaccttccccttgccatcaatgtcatacacctt 62163



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 89/101 (88%), Gaps = 2/101 (1%)
 Strand = Plus / Plus

                                                                         
Query: 515   actcaatcttttgctgaaagctggcccttgtgctggaaggtagagagaaacgaaacaaat 574
             |||||||||||||||||| ||||||| |||  ||| ||||||||||| || |||||||| 
Sbjct: 62290 actcaatcttttgctgaacgctggcctttgcactg-aaggtagagaggaaggaaacaaaa 62348

                                                      
Query: 575   tcctttgaagttcaatccatcaaccatacgtagcaacctct 615
             ||||| ||||||||  |||||||||||||| ||||||||||
Sbjct: 62349 tcctt-gaagttcagcccatcaaccatacgcagcaacctct 62388



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 277   cactagtcgatgggcacttccacctccattttcaggccagg 317
             |||||||| || ||||||||||||||||| || ||||||||
Sbjct: 61064 cactagtcaataggcacttccacctccatctttaggccagg 61104



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 336   aaaatcttctaatgatagagtggaatcccgtgtgtacccagcttcttccaacacctttgt 395
             ||||||||| || || || ||| |||||| |||||| |||||||||||||  || |||||
Sbjct: 61277 aaaatcttccaaagaaagcgtgcaatcccttgtgtatccagcttcttccagtacatttgt 61336

                    
Query: 396   tagtact 402
             || ||||
Sbjct: 61337 tattact 61343
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>dbj|AK106976.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H02, full
            insert sequence
          Length = 2604

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 120/145 (82%)
 Strand = Plus / Minus

                                                                        
Query: 277  cactagtcgatgggcacttccacctccattttcaggccagggtggtcgatgatcgtcaca 336
            |||||||| || ||||||||||||||||| || |||||||| || || || ||| |   |
Sbjct: 2359 cactagtcaataggcacttccacctccatctttaggccaggatgatctataatcctggta 2300

                                                                        
Query: 337  aaatcttctaatgatagagtggaatcccgtgtgtacccagcttcttccaacacctttgtt 396
            |||||||| || || || ||| |||||| |||||| |||||||||||||  || ||||||
Sbjct: 2299 aaatcttccaaagaaagcgtgcaatcccttgtgtatccagcttcttccagtacatttgtt 2240

                                     
Query: 397  agtacttgctctctttgttgctctg 421
            | |||| |||||||||||| |||||
Sbjct: 2239 attactcgctctctttgttcctctg 2215
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 82     caaaaacagaagaaaaaatgattaaa 107
              |||||| |||||||||||||||||||
Sbjct: 795117 caaaaaaagaagaaaaaatgattaaa 795092
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>emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             3/6
          Length = 317511

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 82    caaaaacagaagaaaaaatgattaaa 107
             |||||| |||||||||||||||||||
Sbjct: 94012 caaaaaaagaagaaaaaatgattaaa 93987
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>gb|AC069540.6| Homo sapiens chromosome 10 clone RP11-344L13, complete sequence
          Length = 201182

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 163    aatgagctcccattccattctg 184
              ||||||||||||||||||||||
Sbjct: 182679 aatgagctcccattccattctg 182658
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>gb|U52002.2| Caenorhabditis elegans cosmid F08B4, complete sequence
          Length = 36325

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 83    aaaaacagaagaaaaaatgattaaa 107
             |||||| ||||||||||||||||||
Sbjct: 22203 aaaaactgaagaaaaaatgattaaa 22227
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>ref|XM_533013.2| PREDICTED: Canis familiaris similar to Transcription intermediary
            factor 1-gamma (TIF1-gamma) (RET-fused gene 7 protein)
            (Rfg7 protein) (Tripartite motif protein 33) (LOC475804),
            mRNA
          Length = 3750

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 238  ttgctgcatcctcatctgctg 258
            |||||||||||||||||||||
Sbjct: 1632 ttgctgcatcctcatctgctg 1612
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>gb|AC003108.1|HUAC003108 Human Chromosome 16 BAC clone CIT987SK-327O24, complete sequence
          Length = 164564

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 79     tctcaaaaacagaagaaaaaa 99
              |||||||||||||||||||||
Sbjct: 138568 tctcaaaaacagaagaaaaaa 138548
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>gb|AE004159.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 67
            of 251 of the complete chromosome
          Length = 13190

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 581  gaagttcaatccatcaaccatacgtagca 609
            |||||||| | ||||||||||||||||||
Sbjct: 7805 gaagttcagtgcatcaaccatacgtagca 7833
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>emb|AL596449.4| Human DNA sequence from clone RP11-363J24 on chromosome 6, complete
             sequence
          Length = 74194

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    tctcaaaaacagaagaaaaaa 99
             |||||||||||||||||||||
Sbjct: 35140 tctcaaaaacagaagaaaaaa 35120
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>emb|AL357972.18| Human DNA sequence from clone RP5-895L2 on chromosome 1, complete
             sequence
          Length = 108566

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    tctcaaaaacagaagaaaaaa 99
             |||||||||||||||||||||
Sbjct: 39831 tctcaaaaacagaagaaaaaa 39851
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>gb|AC127891.2| Homo sapiens 12 BAC RP11-91I24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 113065

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   gtgctggaaggtagagagaaa 564
             |||||||||||||||||||||
Sbjct: 48427 gtgctggaaggtagagagaaa 48447
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>gb|AC129031.1| Homo sapiens 12 BAC RP11-106H17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 88645

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   gtgctggaaggtagagagaaa 564
             |||||||||||||||||||||
Sbjct: 22007 gtgctggaaggtagagagaaa 22027
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>gb|AC087274.8| Homo sapiens chromosome 8, clone RP11-681J6, complete sequence
          Length = 191786

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 400    acttgctctctttgttgctct 420
              |||||||||||||||||||||
Sbjct: 126921 acttgctctctttgttgctct 126901
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>gb|AC098479.2| Homo sapiens chromosome 3 clone RP11-80H18, complete sequence
          Length = 178010

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    tctcaaaaacagaagaaaaaa 99
             |||||||||||||||||||||
Sbjct: 15365 tctcaaaaacagaagaaaaaa 15385
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>gb|AC012621.8| Homo sapiens chromosome 16 clone CTD-2055J8, complete sequence
          Length = 145023

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 79     tctcaaaaacagaagaaaaaa 99
              |||||||||||||||||||||
Sbjct: 114253 tctcaaaaacagaagaaaaaa 114233
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>gb|AC137936.3| Homo sapiens chromosome 3 clone RP11-456N14, complete sequence
          Length = 187869

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 79     tctcaaaaacagaagaaaaaa 99
              |||||||||||||||||||||
Sbjct: 149770 tctcaaaaacagaagaaaaaa 149790
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>emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-80A15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185251

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 261   atctgcattctcccttcacta 281
             |||||||||||||||||||||
Sbjct: 35132 atctgcattctcccttcacta 35112
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>gb|AC148053.3| Carollia perspicillata clone 594J14, complete sequence
          Length = 125844

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 148   acaagaactcaaaacaatgag 168
             |||||||||||||||||||||
Sbjct: 86880 acaagaactcaaaacaatgag 86860
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>dbj|AB209613.1| Homo sapiens mRNA for deoxyribonuclease I-like 3 precursor variant
            protein
          Length = 4137

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 79   tctcaaaaacagaagaaaaaa 99
            |||||||||||||||||||||
Sbjct: 1049 tctcaaaaacagaagaaaaaa 1029
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 148     acaagaactcaaaacaatgag 168
               |||||||||||||||||||||
Sbjct: 1139098 acaagaactcaaaacaatgag 1139078
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>gb|AC161474.4| Pan troglodytes BAC clone CH251-488B17 from chromosome 7, complete
              sequence
          Length = 191529

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    gtgtacccagcttcttccaa 386
              ||||||||||||||||||||
Sbjct: 152768 gtgtacccagcttcttccaa 152749
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>ref|XM_612660.2| PREDICTED: Bos taurus similar to Transcription intermediary factor
            1-gamma (TIF1-gamma) (RET-fused gene 7 protein) (Rfg7
            protein) (Tripartite motif protein 33) (LOC533296), mRNA
          Length = 4076

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  tgctgcatcctcatctgctg 258
            ||||||||||||||||||||
Sbjct: 1982 tgctgcatcctcatctgctg 1963
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>gb|AC101787.11| Mus musculus chromosome 1, clone RP24-147F6, complete sequence
          Length = 172617

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   cttgctctctttgttgctct 420
             ||||||||||||||||||||
Sbjct: 41610 cttgctctctttgttgctct 41629
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>gb|AC146002.2| Pan troglodytes BAC clone RP43-153B17 from 7, complete sequence
          Length = 169542

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    gtgtacccagcttcttccaa 386
              ||||||||||||||||||||
Sbjct: 131481 gtgtacccagcttcttccaa 131462
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>gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosome 15, complete
             sequence
          Length = 211336

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 77    cctctcaaaaacagaagaaaaaat 100
             |||||||||||||||| |||||||
Sbjct: 63579 cctctcaaaaacagaaaaaaaaat 63602
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>gb|AC002127.1| Homo sapiens BAC clone CTA-305H12 from 7, complete sequence
          Length = 144165

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    gtgtacccagcttcttccaa 386
              ||||||||||||||||||||
Sbjct: 137130 gtgtacccagcttcttccaa 137149
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>emb|Z82217.1|HS78B3 Human DNA sequence from clone RP1-78B3 on chromosome 22, complete
             sequence
          Length = 73031

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    ctcaaaaacagaagaaaaaa 99
             ||||||||||||||||||||
Sbjct: 59498 ctcaaaaacagaagaaaaaa 59517
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>emb|AL356259.11| Human DNA sequence from clone RP11-385E5 on chromosome 13 Contains a
             mitochondrial ribosomal protein L3 (MRPL3) (MRL3 RPML3)
             pseudogene, a ADP-ribosyltransferase (NAD+; poly
             (ADP-ribose) polymerase)-like 1 (ADPRTL1) (PH5P p193 PARPL
             VPARP VAULT3 KIAA0177) pseudogene, a cyclin K (CCNK)
             pseudogene, a pseudogene similar to ornithine transporter
             2 (ORNT2), a KIAA1074 protein pseudogene, three novel
             genes and three CpG islands, complete sequence
          Length = 141876

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    aaacagaagaaaaaatgatt 104
             ||||||||||||||||||||
Sbjct: 54329 aaacagaagaaaaaatgatt 54310
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>emb|AL162721.11| Human DNA sequence from clone RP4-549K21 on chromosome 6, complete
             sequence
          Length = 23797

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    tctcaaaaacagaagaaaaa 98
             ||||||||||||||||||||
Sbjct: 14601 tctcaaaaacagaagaaaaa 14582
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>gb|AC162899.5| Mus musculus chromosome 1, clone RP24-222G3, complete sequence
          Length = 176916

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    cttgctctctttgttgctct 420
              ||||||||||||||||||||
Sbjct: 163809 cttgctctctttgttgctct 163790
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>emb|AL645609.21| Mouse DNA sequence from clone RP23-432O10 on chromosome 11 Contains the
             5' end of the Spred2 gene for sprouty protein with EVH-1
             domain 2, related sequence and two CpG islands, complete
             sequence
          Length = 121493

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    tctcaaaaacagaagaaaaaatga 102
             ||||||||||| ||||||||||||
Sbjct: 57991 tctcaaaaacaaaagaaaaaatga 58014
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>gb|AC011353.5| Homo sapiens chromosome 5 clone CTC-328A6, complete sequence
          Length = 143527

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   acaatgagctcccattccat 180
             ||||||||||||||||||||
Sbjct: 13626 acaatgagctcccattccat 13645
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>gb|U39674.1| Caenorhabditis elegans cosmid C06E2, complete sequence
          Length = 47743

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   gtggtcgatgatcgtcacaa 337
             ||||||||||||||||||||
Sbjct: 43063 gtggtcgatgatcgtcacaa 43044
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>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence
          Length = 130054

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   gaaacaaattcctttgaagt 585
             ||||||||||||||||||||
Sbjct: 87769 gaaacaaattcctttgaagt 87788
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>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence
          Length = 140624

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   gaaacaaattcctttgaagt 585
             ||||||||||||||||||||
Sbjct: 57732 gaaacaaattcctttgaagt 57713
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>gb|AC083813.29| Homo sapiens 12q BAC RP11-304C10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 216123

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 253    ctgctgaaatctgcattctcccttcact 280
              |||||||||| |||||||||||| ||||
Sbjct: 116416 ctgctgaaatttgcattctccctccact 116443
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>gb|AC163762.4| Pan troglodytes BAC clone CH251-176O2 from chromosome unknown, complete
              sequence
          Length = 161992

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     tctcaaaaacagaagaaaaa 98
              ||||||||||||||||||||
Sbjct: 105983 tctcaaaaacagaagaaaaa 105964
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>gb|AC009708.11| Homo sapiens chromosome 8, clone RP11-318G5, complete sequence
          Length = 220215

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 493   atgtcatacaccttaaacat 512
             ||||||||||||||||||||
Sbjct: 71671 atgtcatacaccttaaacat 71652
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>gb|AC091906.3| Homo sapiens chromosome 5 clone RP11-193P20, complete sequence
          Length = 195510

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    acaagaactcaaaacaatga 167
              ||||||||||||||||||||
Sbjct: 149106 acaagaactcaaaacaatga 149087
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>gb|AC156035.5| Mus musculus BAC clone RP23-302M20 from chromosome 12, complete
             sequence
          Length = 187168

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   tacacaagaactcaaaacaa 164
             ||||||||||||||||||||
Sbjct: 81574 tacacaagaactcaaaacaa 81593
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>gb|DQ027001.1| Homo sapiens ribonucleotide reductase M2 B (TP53 inducible) (RRM2B)
             gene, complete cds
          Length = 37983

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 493   atgtcatacaccttaaacat 512
             ||||||||||||||||||||
Sbjct: 14527 atgtcatacaccttaaacat 14508
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>gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G19 genomic sequence, complete
             sequence
          Length = 133379

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    caaaaacagaagaaaaaatg 101
             ||||||||||||||||||||
Sbjct: 57240 caaaaacagaagaaaaaatg 57259
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>gb|AC016748.3| Homo sapiens BAC clone RP11-494M7 from 2, complete sequence
          Length = 182776

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 253   ctgctgaaatctgcattctcccttcact 280
             |||||||||| |||||||||||| ||||
Sbjct: 38141 ctgctgaaatttgcattctccctccact 38168
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>gb|AC004615.1|AC004615 Homo sapiens BAC clone GS1-405L21 from 5p15.2, complete sequence
          Length = 235141

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   acaagaactcaaaacaatga 167
             ||||||||||||||||||||
Sbjct: 19357 acaagaactcaaaacaatga 19376
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>emb|AL445885.1|CNS07EES Human chromosome 14 DNA sequence BAC C-2506J14 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 170892

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    tctcaaaaacagaagaaaaa 98
             ||||||||||||||||||||
Sbjct: 92515 tctcaaaaacagaagaaaaa 92534
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>emb|AL352976.3|CNS05TBV Human chromosome 14 DNA sequence BAC R-487K10 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 180460

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   tctcaaaaacagaagaaaaa 98
            ||||||||||||||||||||
Sbjct: 2516 tctcaaaaacagaagaaaaa 2535
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>emb|CT030154.8| Mouse DNA sequence from clone RP23-387H3 on chromosome 12, complete
             sequence
          Length = 213294

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    ctcaaaaacagaagaaaaaa 99
             ||||||||||||||||||||
Sbjct: 82598 ctcaaaaacagaagaaaaaa 82617
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>emb|BX088570.6| Mouse DNA sequence from clone RP23-292J1 on chromosome 4, complete
              sequence
          Length = 244187

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     tctcaaaaacagaagaaaaaatga 102
              ||||||||||| ||||||||||||
Sbjct: 187904 tctcaaaaacaaaagaaaaaatga 187927
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>dbj|AP004925.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13P22, TM0079b,
             complete sequence
          Length = 33290

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   atgggcacttccacctccattttc 309
             |||| |||||||||||||||||||
Sbjct: 18942 atggccacttccacctccattttc 18965
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>gb|AC156638.2| Mus musculus BAC clone RP24-255L24 from chromosome 9, complete sequence
          Length = 162792

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   tgcatgcattcgggcatgcatgtg 138
             |||||||||||| |||||||||||
Sbjct: 39160 tgcatgcattcgtgcatgcatgtg 39183
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>dbj|AP002907.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB431C1
          Length = 98146

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   atgtcatacaccttaaacat 512
             ||||||||||||||||||||
Sbjct: 47927 atgtcatacaccttaaacat 47946
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>emb|AL645535.16| Mouse DNA sequence from clone RP23-145G23 on chromosome 11, complete
             sequence
          Length = 161363

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    ctcaaaaacagaagaaaaaa 99
             ||||||||||||||||||||
Sbjct: 95970 ctcaaaaacagaagaaaaaa 95989
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>emb|AL670680.6| Mouse DNA sequence from clone RP23-314D24 on chromosome 4, complete
              sequence
          Length = 150897

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 216    ttcatcagacatgactgagagcttgctg 243
              |||| |||||||||||| ||||||||||
Sbjct: 142652 ttcagcagacatgactgtgagcttgctg 142625


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,715,531
Number of Sequences: 3902068
Number of extensions: 6715531
Number of successful extensions: 164627
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 164411
Number of HSP's gapped (non-prelim): 205
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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