| Clone Name | rbaal2n21 |
|---|---|
| Clone Library Name | barley_pub |
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 31.6 bits (70), Expect = 1.9 Identities = 31/104 (29%), Positives = 33/104 (31%), Gaps = 13/104 (12%) Frame = +2 Query: 299 PPACRTEPHPRPATPRLM------CVPSPVEVEAMSCG----AALPPVHYPGKGQWXXXX 448 PP T PRP TP P PV A A PP PG Sbjct: 456 PPPTSTHATPRPTTPGPQTTPPGPATPGPVGASAAPTADSPLTASPPATAPGP----SAA 511 Query: 449 XXXXXXXXXXXGTRGTARW--RSP*QY-HHQVDPSPTAPRMLPP 571 GTRGTAR P + H D P +P PP Sbjct: 512 NVSVAATTATPGTRGTARTPPTDPKTHPHGPADAPPGSPAPPPP 555
>IL6RB_RAT (P40190) Interleukin-6 receptor beta chain precursor (IL-6R-beta)| (Interleukin 6 signal transducer) (Membrane glycoprotein 130) (gp130) (CD130 antigen) Length = 918 Score = 31.6 bits (70), Expect = 1.9 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Frame = +1 Query: 103 DTIILVH-----QESPETSMEFTMYAKRGATTSVHRAMSPFMCGFILTTLMSGLWCGRSR 267 DT+ +VH +E + EFT + A + + P F+LTTL+ L+C R Sbjct: 584 DTLYMVHMAAYTEEGGKDGPEFTFTTLKFAQGEIEAIVVPVCLAFLLTTLLGVLFCFNKR 643
>ZN490_HUMAN (Q9ULM2) Zinc finger protein 490| Length = 529 Score = 31.2 bits (69), Expect = 2.5 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 540 HHQQRPECCHHYDLKLHRCPDC 605 H +Q+P CH Y K H+C +C Sbjct: 178 HTEQKPNECHEYGEKPHKCKEC 199
>MNT_MOUSE (O08789) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)| Length = 591 Score = 30.4 bits (67), Expect = 4.3 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = +2 Query: 296 QPPACRTE---PHPRPATPRLMCVPSPVEVEAMSCGAALPPVH 415 QPP +T P P PATP VP+PV + A + G + H Sbjct: 404 QPPQQKTPLPGPPPPPATPTQTLVPAPVHLVATAGGGSTVIAH 446
>MSH5_RAT (Q6MG62) MutS protein homolog 5| Length = 831 Score = 30.0 bits (66), Expect = 5.7 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = -3 Query: 260 RPHHSPLISVVKMKPHMKGLIALCTLVVAPLFAYMVNSMDVSGLSWCTRIMVSCGVSGAL 81 RPH+SP I V++K L+ LC P NS D G +++ SG Sbjct: 543 RPHYSPCIQGVRIKNGRHPLMELCARTFVP------NSTDCGGDQGRVKVITGPNSSGKS 596 Query: 80 TY 75 Y Sbjct: 597 IY 598
>OR7A5_HUMAN (Q15622) Olfactory receptor 7A5 (Olfactory receptor TPCR92)| Length = 319 Score = 29.3 bits (64), Expect = 9.7 Identities = 15/47 (31%), Positives = 29/47 (61%) Frame = -3 Query: 245 PLISVVKMKPHMKGLIALCTLVVAPLFAYMVNSMDVSGLSWCTRIMV 105 PL +V M PH+ GL+ L + ++ L++ ++ + V LS+CT + + Sbjct: 129 PLHYMVIMNPHLCGLLVLASWTMSALYS-LLQILMVVRLSFCTALEI 174
>OST4_HUMAN (Q9Y661) Heparan sulfate glucosamine 3-O-sulfotransferase 4 (EC| 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4) (Heparan sulfate 3-O-sulfotransferase 4) (h3-OST-4) Length = 456 Score = 29.3 bits (64), Expect = 9.7 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +2 Query: 296 QPPACRTEPHPRPATPRLMCVPSPVEVEAMSCGAALPPVHYPGKGQ 433 + P EP P P P L+ P+PV + A S A PP+ G+ Sbjct: 67 ESPGAAAEPPPSPPPPSLL--PTPVRLGAPSQPPAPPPLDNASHGE 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,280,838 Number of Sequences: 219361 Number of extensions: 1778969 Number of successful extensions: 5283 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4941 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5269 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)