ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2n21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
2dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
3gb|AF227240.1|AF227240 Rabbit oral papillomavirus, complete genome 46 0.14
4gb|M19497.1|RAPO1 Rabbit oral papillomavirus DNA fragment with E... 46 0.14
5gb|AY228794.1| Haematopus ater recombination activating protein ... 44 0.54
6gb|AY339111.1| Haematopus ostralegus recombination activating pr... 44 0.54
7emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on ch... 44 0.54
8gb|AF334828.1| Homo sapiens cartilage-hair hypoplasia region gen... 44 0.54
9emb|BX647690.1|HSM807836 Homo sapiens mRNA; cDNA DKFZp686E23118 ... 44 0.54
10ref|XM_720090.1| Plasmodium yoelii yoelii str. 17XNL neurofilame... 42 2.1
11gb|AC150391.2| Branchiostoma floridae clone CH302-119J21, comple... 40 8.4
12gb|AY494670.1| Uncultured Gram-positive bacterium clone FIRM7 16... 40 8.4
13gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' reg... 40 8.4
14gb|AC159991.9| Mus musculus chromosome 1, clone RP23-413H17, com... 40 8.4
15ref|XM_369513.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 8.4
16gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 8.4
17gb|AC149631.3| Rhinolophus ferrumequinum clone VMRC7-80B12, comp... 40 8.4
18ref|XM_745197.1| Aspergillus fumigatus Af293 hypothetical protei... 40 8.4
19gb|AF485901.1| Dendrobium sp. XMW-2002-10 MYB10 (MYB10) mRNA, co... 40 8.4
20emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 8.4
21emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 8.4
22emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 40 8.4
23gb|AY091013.1| Arabidopsis thaliana unknown protein (At1g03580) ... 40 8.4
24gb|AC093502.2| Drosophila melanogaster 3L BAC RP98-48C4 (Roswell... 40 8.4
25dbj|AB243297.1| Rhizosolenia setigera RNA virus RsRNAV ORF-1, Rs... 40 8.4
26gb|AC104703.3| Drosophila melanogaster 3L BAC RP98-35M1 (Roswell... 40 8.4
27gb|AC110616.4| Homo sapiens BAC clone RP11-597I10 from 4, comple... 40 8.4
28ref|NM_078663.2| Drosophila melanogaster BarH1 CG5529-RA (B-H1),... 40 8.4
29gb|AC013432.4| Drosophila melanogaster, chromosome X, region 15F... 40 8.4
30gb|AC010701.3| Drosophila melanogaster 3L BAC RP98-26P10 (Roswel... 40 8.4
31emb|BX682548.7| Zebrafish DNA sequence from clone DKEY-94A14 in ... 40 8.4
32gb|AY058309.1| Drosophila melanogaster GH07238 full length cDNA 40 8.4
33dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
34gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 8.4
35gb|BT024281.1| Drosophila melanogaster IP14069 full insert cDNA 40 8.4
36ref|XM_343448.2| PREDICTED: Rattus norvegicus similar to solute ... 40 8.4
37gb|AC002560.2|AC002560 Genomic sequence for Arabidopsis thaliana... 40 8.4
38ref|NM_205829.1| Xenopus tropicalis hypothetical protein MGC7584... 40 8.4
39dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 40 8.4
40dbj|AK111200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
41dbj|AK100687.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
42gb|BC066129.1| Xenopus tropicalis hypothetical protein MGC75848,... 40 8.4
43emb|CR761091.2| Xenopus tropicalis finished cDNA, clone TEgg073i18 40 8.4
44gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76... 40 8.4
45gb|AE003536.4| Drosophila melanogaster chromosome 3L, section 49... 40 8.4
46gb|AE003505.3| Drosophila melanogaster chromosome X, section 57 ... 40 8.4
47gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic se... 40 8.4
48gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 8.4
49gb|M73259.1|DROBARH1M1 Drosophila melanogaster homeobox protein ... 40 8.4 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 262      tcgaggtgaaggctgtaccagaggagcaccgggacaacctccggcatgcaga 313
                ||||||||||||||| ||||||| ||| ||||||||| |||||||| |||||
Sbjct: 13564239 tcgaggtgaaggctggaccagagaagcgccgggacaagctccggcacgcaga 13564188
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>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1045F02
          Length = 215378

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                  
Query: 262    tcgaggtgaaggctgtaccagaggagcaccgggacaacctccggcatgcaga 313
              ||||||||||||||| ||||||| ||| ||||||||| |||||||| |||||
Sbjct: 118199 tcgaggtgaaggctggaccagagaagcgccgggacaagctccggcacgcaga 118148
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>gb|AF227240.1|AF227240 Rabbit oral papillomavirus, complete genome
          Length = 7565

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 382  aatgtcttgtggagcagctctgc 404
            |||||||||||||||||||||||
Sbjct: 4274 aatgtcttgtggagcagctctgc 4252
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>gb|M19497.1|RAPO1 Rabbit oral papillomavirus DNA fragment with E2 and E4 protein gene
           homologues
          Length = 1519

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 382 aatgtcttgtggagcagctctgc 404
           |||||||||||||||||||||||
Sbjct: 897 aatgtcttgtggagcagctctgc 875
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>gb|AY228794.1| Haematopus ater recombination activating protein 1 (RAG-1) gene,
            partial cds
          Length = 2871

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 122  accaggagagcccagaaacatc 143
            ||||||||||||||||||||||
Sbjct: 1105 accaggagagcccagaaacatc 1126
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>gb|AY339111.1| Haematopus ostralegus recombination activating protein gene,
           partial cds
          Length = 930

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 122 accaggagagcccagaaacatc 143
           ||||||||||||||||||||||
Sbjct: 148 accaggagagcccagaaacatc 169
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>emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on chromosome 9p13.1-13.3
             Contains the 3' end of a novel gene, a protein associated
             with PRK1 (AWP1) pseudogene, a novel gene  (KIAA0375), a
             ribosomal protein L36a (L44L, RPL44) (RPL36A) pseudogene, 
             a novel gene, a ribosomal protein S29 (RPS29) pseudogene
             and a CpG island, complete sequence
          Length = 153826

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 7     tgctgctgccgcggctgctggt 28
             ||||||||||||||||||||||
Sbjct: 98838 tgctgctgccgcggctgctggt 98817
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>gb|AF334828.1| Homo sapiens cartilage-hair hypoplasia region gene sequence
          Length = 83958

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 7     tgctgctgccgcggctgctggt 28
             ||||||||||||||||||||||
Sbjct: 80134 tgctgctgccgcggctgctggt 80155
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>emb|BX647690.1|HSM807836 Homo sapiens mRNA; cDNA DKFZp686E23118 (from clone DKFZp686E23118)
          Length = 3753

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 7    tgctgctgccgcggctgctggt 28
            ||||||||||||||||||||||
Sbjct: 2111 tgctgctgccgcggctgctggt 2090
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>ref|XM_720090.1| Plasmodium yoelii yoelii str. 17XNL neurofilament protein H form H2
            (PY04830) partial mRNA
          Length = 2436

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  tcaccagtagaagtagaagca 382
            |||||||||||||||||||||
Sbjct: 1981 tcaccagtagaagtagaagca 2001



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  tcaccagtagaagtagaagca 382
            |||||||||||||||||||||
Sbjct: 1945 tcaccagtagaagtagaagca 1965



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  tcaccagtagaagtagaagca 382
            |||||||||||||||||||||
Sbjct: 1909 tcaccagtagaagtagaagca 1929



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  tcaccagtagaagtagaagca 382
            |||||||||||||||||||||
Sbjct: 1873 tcaccagtagaagtagaagca 1893



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  tcaccagtagaagtagaagca 382
            |||||||||||||||||||||
Sbjct: 1765 tcaccagtagaagtagaagca 1785



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  tcaccagtagaagtagaagca 382
            |||||||||||||||||||||
Sbjct: 1639 tcaccagtagaagtagaagca 1659
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>gb|AC150391.2| Branchiostoma floridae clone CH302-119J21, complete sequence
          Length = 157607

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   agtagaagtagaagcaatgt 386
             ||||||||||||||||||||
Sbjct: 81060 agtagaagtagaagcaatgt 81041
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>gb|AY494670.1| Uncultured Gram-positive bacterium clone FIRM7 16S ribosomal RNA
          gene, partial sequence
          Length = 445

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 8  gctgctgccgcggctgctgg 27
          ||||||||||||||||||||
Sbjct: 43 gctgctgccgcggctgctgg 24
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>gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' region photosynthesis gene cluster,
             partial sequence
          Length = 24637

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   gcgcgtcagcgccgccaccg 472
             ||||||||||||||||||||
Sbjct: 12090 gcgcgtcagcgccgccaccg 12071
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>gb|AC159991.9| Mus musculus chromosome 1, clone RP23-413H17, complete sequence
          Length = 180715

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   caccgtggagctcaggaaca 487
             ||||||||||||||||||||
Sbjct: 97636 caccgtggagctcaggaaca 97617
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>ref|XM_369513.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG05951.4) partial mRNA
          Length = 2163

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    ccttgctgctgccgcggctg 23
            ||||||||||||||||||||
Sbjct: 1727 ccttgctgctgccgcggctg 1708
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 513    catagcagtatcatcatcaa 532
              ||||||||||||||||||||
Sbjct: 312513 catagcagtatcatcatcaa 312494
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>gb|AC149631.3| Rhinolophus ferrumequinum clone VMRC7-80B12, complete sequence
          Length = 142320

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ctgagaccccacatgacacc 108
              ||||||||||||||||||||
Sbjct: 109080 ctgagaccccacatgacacc 109061
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>ref|XM_745197.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g05410)
           partial mRNA
          Length = 1854

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 477 gctcaggaacaagaggaact 496
           ||||||||||||||||||||
Sbjct: 538 gctcaggaacaagaggaact 557
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>gb|AF485901.1| Dendrobium sp. XMW-2002-10 MYB10 (MYB10) mRNA, complete cds
          Length = 1157

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 7   tgctgctgccgcggctgctggttctctt 34
           ||||||||| || |||||||||||||||
Sbjct: 516 tgctgctgctgctgctgctggttctctt 489
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>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   gcgcgtcagcgccgccaccg 472
             ||||||||||||||||||||
Sbjct: 96198 gcgcgtcagcgccgccaccg 96179
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 453  gcgcgtcagcgccgccaccg 472
            ||||||||||||||||||||
Sbjct: 7100 gcgcgtcagcgccgccaccg 7081
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>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    gcgcgtcagcgccgccaccg 472
              ||||||||||||||||||||
Sbjct: 292018 gcgcgtcagcgccgccaccg 291999
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>gb|AY091013.1| Arabidopsis thaliana unknown protein (At1g03580) mRNA, partial cds
          Length = 907

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 aggagctactaccagtgtac 190
           ||||||||||||||||||||
Sbjct: 475 aggagctactaccagtgtac 494
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>gb|AC093502.2| Drosophila melanogaster 3L BAC RP98-48C4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 166249

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ttgctgctgccgcggctgct 25
             ||||||||||||||||||||
Sbjct: 39030 ttgctgctgccgcggctgct 39011
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>dbj|AB243297.1| Rhizosolenia setigera RNA virus RsRNAV ORF-1, RsRNAV ORF-2 genes for
            polyprotein, capsid proteins, complete cds
          Length = 8877

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 512  ccatagcagtatcatcatca 531
            ||||||||||||||||||||
Sbjct: 1444 ccatagcagtatcatcatca 1425
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>gb|AC104703.3| Drosophila melanogaster 3L BAC RP98-35M1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 185404

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ttgctgctgccgcggctgct 25
             ||||||||||||||||||||
Sbjct: 87485 ttgctgctgccgcggctgct 87466
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>gb|AC110616.4| Homo sapiens BAC clone RP11-597I10 from 4, complete sequence
          Length = 80656

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 369   tagaagtagaagcaatgtcttgtg 392
             ||||||| ||||||||||||||||
Sbjct: 43667 tagaagtggaagcaatgtcttgtg 43690
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>ref|NM_078663.2| Drosophila melanogaster BarH1 CG5529-RA (B-H1), mRNA
          Length = 2697

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 7   tgctgctgccgcggctgctg 26
           ||||||||||||||||||||
Sbjct: 790 tgctgctgccgcggctgctg 809
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>gb|AC013432.4| Drosophila melanogaster, chromosome X, region 15F-15F, BAC clone
            BACR01K05, complete sequence
          Length = 162761

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    tgctgctgccgcggctgctg 26
            ||||||||||||||||||||
Sbjct: 4598 tgctgctgccgcggctgctg 4579
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>gb|AC010701.3| Drosophila melanogaster 3L BAC RP98-26P10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 174920

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     tgctgctgccgcggctgctg 26
             ||||||||||||||||||||
Sbjct: 71673 tgctgctgccgcggctgctg 71692
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>emb|BX682548.7| Zebrafish DNA sequence from clone DKEY-94A14 in linkage group 2,
             complete sequence
          Length = 111741

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   cttcattttgacgacgctga 238
             ||||||||||||||||||||
Sbjct: 35523 cttcattttgacgacgctga 35542
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>gb|AY058309.1| Drosophila melanogaster GH07238 full length cDNA
          Length = 2714

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 7   tgctgctgccgcggctgctg 26
           ||||||||||||||||||||
Sbjct: 790 tgctgctgccgcggctgctg 809
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 267      gtgaaggctgtaccagaggagcac 290
                |||||||||||||| |||||||||
Sbjct: 20257864 gtgaaggctgtacctgaggagcac 20257841
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 89      ctgagaccccacatgacacc 108
               ||||||||||||||||||||
Sbjct: 1596427 ctgagaccccacatgacacc 1596408
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>gb|BT024281.1| Drosophila melanogaster IP14069 full insert cDNA
          Length = 2029

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   ttgctgctgccgcggctgct 25
           ||||||||||||||||||||
Sbjct: 192 ttgctgctgccgcggctgct 173
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>ref|XM_343448.2| PREDICTED: Rattus norvegicus similar to solute carrier family 9
           (sodium/hydrogen exchanger), isoform 9 (LOC363115), mRNA
          Length = 2049

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 7   tgctgctgccgcggctgctg 26
           ||||||||||||||||||||
Sbjct: 203 tgctgctgccgcggctgctg 184
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>gb|AC002560.2|AC002560 Genomic sequence for Arabidopsis thaliana BAC F21B7 from chromosome I,
             complete sequence
          Length = 101176

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   aggagctactaccagtgtac 190
             ||||||||||||||||||||
Sbjct: 57450 aggagctactaccagtgtac 57469
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>ref|NM_205829.1| Xenopus tropicalis hypothetical protein MGC75848 (MGC75848), mRNA
          Length = 2099

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 523 tcatcatcaagttgatccat 542
           ||||||||||||||||||||
Sbjct: 746 tcatcatcaagttgatccat 727
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>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    atccatggagttcaccatgt 160
              ||||||||||||||||||||
Sbjct: 483463 atccatggagttcaccatgt 483444
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>dbj|AK111200.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-E02, full
            insert sequence
          Length = 3416

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    tgctgctgccgcggctgctg 26
            ||||||||||||||||||||
Sbjct: 1729 tgctgctgccgcggctgctg 1748
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>dbj|AK100687.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114A21, full
           insert sequence
          Length = 1335

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 267 gtgaaggctgtaccagaggagcac 290
           |||||||||||||| |||||||||
Sbjct: 583 gtgaaggctgtacctgaggagcac 606
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>gb|BC066129.1| Xenopus tropicalis hypothetical protein MGC75848, mRNA (cDNA clone
           MGC:75848 IMAGE:5382660), complete cds
          Length = 2099

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 523 tcatcatcaagttgatccat 542
           ||||||||||||||||||||
Sbjct: 746 tcatcatcaagttgatccat 727
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>emb|CR761091.2| Xenopus tropicalis finished cDNA, clone TEgg073i18
          Length = 2003

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 523 tcatcatcaagttgatccat 542
           ||||||||||||||||||||
Sbjct: 698 tcatcatcaagttgatccat 679
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>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete
             sequence
          Length = 294272

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     tgctgctgccgcggctgctg 26
             ||||||||||||||||||||
Sbjct: 18267 tgctgctgccgcggctgctg 18248
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>gb|AE003536.4| Drosophila melanogaster chromosome 3L, section 49 of 83 of the complete
              sequence
          Length = 350428

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      ttgctgctgccgcggctgct 25
              ||||||||||||||||||||
Sbjct: 289081 ttgctgctgccgcggctgct 289100
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>gb|AE003505.3| Drosophila melanogaster chromosome X, section 57 of 74 of the complete
              sequence
          Length = 314205

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      tgctgctgccgcggctgctg 26
              ||||||||||||||||||||
Sbjct: 161801 tgctgctgccgcggctgctg 161820
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>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence
          Length = 230278

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     tgctgctgccgcggctgctg 26
             ||||||||||||||||||||
Sbjct: 62706 tgctgctgccgcggctgctg 62687
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 7       tgctgctgccgcggctgctg 26
               ||||||||||||||||||||
Sbjct: 2169660 tgctgctgccgcggctgctg 2169641
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>gb|M73259.1|DROBARH1M1 Drosophila melanogaster homeobox protein (BarH1) gene, exon 1
          Length = 1358

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    tgctgctgccgcggctgctg 26
            ||||||||||||||||||||
Sbjct: 1125 tgctgctgccgcggctgctg 1144


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,988,642
Number of Sequences: 3902068
Number of extensions: 4988642
Number of successful extensions: 118193
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117918
Number of HSP's gapped (non-prelim): 275
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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