>ref|XM_469530.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1809

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                        
Query: 426  cctgcgcacggtaatggaaaaggctgatattccatcgggggctcaatgtatccaaaaaat 485
            |||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |
Sbjct: 1657 cctgtgcacggtaatggaaaaggctgatattccagcgggggctgaatgcatccaaaaatt 1598

                                                                        
Query: 486  tcataagagcacctggcctttctgggaaaataaaccggtaaacaagttcgtcttttactt 545
            ||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 1597 tcataagtgcaccaggcctttctgggaaaatgaaccggtaaacaagttcatctgttactt 1538

             
Query: 546  c 546
            |
Sbjct: 1537 c 1537

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                            
Query: 426      cctgcgcacggtaatggaaaaggctgatattccatcgggggctcaatgtatccaaaaaat 485
                |||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |
Sbjct: 28549232 cctgtgcacggtaatggaaaaggctgatattccagcgggggctgaatgcatccaaaaatt 28549173

                                                                            
Query: 486      tcataagagcacctggcctttctgggaaaataaaccggtaaacaagttcgtcttttactt 545
                ||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 28549172 tcataagtgcaccaggcctttctgggaaaatgaaccggtaaacaagttcatctgttactt 28549113

                 
Query: 546      c 546
                |
Sbjct: 28549112 c 28549112



 Score =  117 bits (59), Expect = 4e-23
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                            
Query: 308      atctcgttgttcatctcagacatgtattcatacccaagattgtcggcacgactcctgaat 367
                ||||||||||||  ||| |||||||| || |||||||||||||| ||||| ||| |||||
Sbjct: 28549607 atctcgttgttctgctccgacatgtactcgtacccaagattgtcagcacggctcttgaat 28549548

                                                                            
Query: 368      tcatcaacttcctccggcggcacttgtatgccaactaacacgtttgctccggtttcgccc 427
                || ||||  |||||||||||||||||||||||||| || || || ||||||||||| |||
Sbjct: 28549547 tcgtcaaactcctccggcggcacttgtatgccaaccaaaacattcgctccggtttcaccc 28549488

                   
Query: 428      tgc 430
                |||
Sbjct: 28549487 tgc 28549485

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                            
Query: 426      cctgcgcacggtaatggaaaaggctgatattccatcgggggctcaatgtatccaaaaaat 485
                |||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |
Sbjct: 28640556 cctgtgcacggtaatggaaaaggctgatattccagcgggggctgaatgcatccaaaaatt 28640497

                                                                            
Query: 486      tcataagagcacctggcctttctgggaaaataaaccggtaaacaagttcgtcttttactt 545
                ||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 28640496 tcataagtgcaccaggcctttctgggaaaatgaaccggtaaacaagttcatctgttactt 28640437

                 
Query: 546      c 546
                |
Sbjct: 28640436 c 28640436



 Score =  117 bits (59), Expect = 4e-23
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                            
Query: 308      atctcgttgttcatctcagacatgtattcatacccaagattgtcggcacgactcctgaat 367
                ||||||||||||  ||| |||||||| || |||||||||||||| ||||| ||| |||||
Sbjct: 28640931 atctcgttgttctgctccgacatgtactcgtacccaagattgtcagcacggctcttgaat 28640872

                                                                            
Query: 368      tcatcaacttcctccggcggcacttgtatgccaactaacacgtttgctccggtttcgccc 427
                || ||||  |||||||||||||||||||||||||| || || || ||||||||||| |||
Sbjct: 28640871 tcgtcaaactcctccggcggcacttgtatgccaaccaaaacattcgctccggtttcaccc 28640812

                   
Query: 428      tgc 430
                |||
Sbjct: 28640811 tgc 28640809

>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
              sequence
          Length = 143681

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                          
Query: 426    cctgcgcacggtaatggaaaaggctgatattccatcgggggctcaatgtatccaaaaaat 485
              |||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |
Sbjct: 143362 cctgtgcacggtaatggaaaaggctgatattccagcgggggctgaatgcatccaaaaatt 143303

                                                                          
Query: 486    tcataagagcacctggcctttctgggaaaataaaccggtaaacaagttcgtcttttactt 545
              ||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 143302 tcataagtgcaccaggcctttctgggaaaatgaaccggtaaacaagttcatctgttactt 143243

               
Query: 546    c 546
              |
Sbjct: 143242 c 143242



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaattcatcaacttcctccggcggcacttgtatgccaactaacacgtttgctccggtttc 423
              |||||| ||||  |||||||||||||||||||||||||| || || || |||||||||||
Sbjct: 143681 gaattcgtcaaactcctccggcggcacttgtatgccaaccaaaacattcgctccggtttc 143622

                     
Query: 424    gccctgc 430
               ||||||
Sbjct: 143621 accctgc 143615

>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete
              sequence
          Length = 158839

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Plus

                                                                          
Query: 426    cctgcgcacggtaatggaaaaggctgatattccatcgggggctcaatgtatccaaaaaat 485
              |||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |
Sbjct: 149664 cctgtgcacggtaatggaaaaggctgatattccagcgggggctgaatgcatccaaaaatt 149723

                                                                          
Query: 486    tcataagagcacctggcctttctgggaaaataaaccggtaaacaagttcgtcttttactt 545
              ||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 149724 tcataagtgcaccaggcctttctgggaaaatgaaccggtaaacaagttcatctgttactt 149783

               
Query: 546    c 546
              |
Sbjct: 149784 c 149784



 Score =  117 bits (59), Expect = 4e-23
 Identities = 107/123 (86%)
 Strand = Plus / Plus

                                                                          
Query: 308    atctcgttgttcatctcagacatgtattcatacccaagattgtcggcacgactcctgaat 367
              ||||||||||||  ||| |||||||| || |||||||||||||| ||||| ||| |||||
Sbjct: 149289 atctcgttgttctgctccgacatgtactcgtacccaagattgtcagcacggctcttgaat 149348

                                                                          
Query: 368    tcatcaacttcctccggcggcacttgtatgccaactaacacgtttgctccggtttcgccc 427
              || ||||  |||||||||||||||||||||||||| || || || ||||||||||| |||
Sbjct: 149349 tcgtcaaactcctccggcggcacttgtatgccaaccaaaacattcgctccggtttcaccc 149408

                 
Query: 428    tgc 430
              |||
Sbjct: 149409 tgc 149411

>gb|AY112192.1| Zea mays CL11117_1 mRNA sequence
          Length = 463

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                       
Query: 326 gacatgtattcatacccaagattgtcggcacgactcctgaattcatcaacttcctccggc 385
           |||||||| || ||||| ||||| || ||| ||||| |||||||||| |  ||| | |||
Sbjct: 276 gacatgtactcgtacccgagattatcagcatgactcttgaattcatcgaagtccactggc 335

                                                       
Query: 386 ggcacttgtatgccaactaacacgtttgctccggtttcgccctg 429
           |||||||| || |||||||| || |||||||| ||||| |||||
Sbjct: 336 ggcacttggataccaactaatacatttgctccagtttcaccctg 379

>gb|AC134242.17| Medicago truncatula clone mth2-10p20, complete sequence
          Length = 115005

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 220   taagccacactaaccattggttggatt 246
             |||||||||||||||||| ||||||||
Sbjct: 41668 taagccacactaaccatttgttggatt 41642

>gb|AC108028.4| Homo sapiens BAC clone RP11-72E18 from 4, complete sequence
          Length = 25320

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 505   ttctgggaaaataaaccggta 525
             |||||||||||||||||||||
Sbjct: 15350 ttctgggaaaataaaccggta 15370

>gb|AY105443.1| Zea mays PCO068369 mRNA sequence
          Length = 601

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 223 gccacactaaccattggttgg 243
           |||||||||||||||||||||
Sbjct: 171 gccacactaaccattggttgg 151

>gb|AC002294.1|AC002294 Arabidopsis thaliana chromosome I BAC F11P17 genomic sequence, complete
             sequence
          Length = 103338

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 73    caaatacaccacacattacta 93
             |||||||||||||||||||||
Sbjct: 21263 caaatacaccacacattacta 21243

>ref|NM_111840.2| Arabidopsis thaliana OMR1 (L-O-METHYLTHREONINE RESISTANT 1);
            catalytic/ threonine ammonia-lyase AT3G10050 (OMR1) mRNA,
            complete cds
          Length = 2238

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 432  cacggtaatggaaaaggctgatattcca 459
            ||||||||||||||||| |||| |||||
Sbjct: 1653 cacggtaatggaaaagggtgatgttcca 1626

>gb|AY653041.1| Synthetic construct threonine dehydratase/deaminase mutant (omr1-7)
            mRNA, complete cds
          Length = 1779

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 432  cacggtaatggaaaaggctgatattcca 459
            ||||||||||||||||| |||| |||||
Sbjct: 1633 cacggtaatggaaaagggtgatgttcca 1606

>gb|AY653040.1| Synthetic construct threonine dehydratase/deaminase mutant (omr1-5)
            mRNA, complete cds
          Length = 1779

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 432  cacggtaatggaaaaggctgatattcca 459
            ||||||||||||||||| |||| |||||
Sbjct: 1633 cacggtaatggaaaagggtgatgttcca 1606

>gb|AY812726.1| Schistosoma japonicum SJCHGC04753 protein mRNA, partial cds
          Length = 718

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  ctacaacaaataacttgtcg 110
           ||||||||||||||||||||
Sbjct: 165 ctacaacaaataacttgtcg 184

>gb|AC010927.5|ATAC010927 Arabidopsis thaliana chromosome III BAC T22K18 genomic sequence,
             complete sequence
          Length = 96232

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 432   cacggtaatggaaaaggctgatattcca 459
             ||||||||||||||||| |||| |||||
Sbjct: 44142 cacggtaatggaaaagggtgatgttcca 44115

>emb|CR589876.7| Zebrafish DNA sequence from clone DKEY-53I3 in linkage group 23, complete
              sequence
          Length = 176042

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 495    cacctggcctttctgggaaa 514
              ||||||||||||||||||||
Sbjct: 104732 cacctggcctttctgggaaa 104713

>gb|AY065037.1| Arabidopsis thaliana AT3g10050/T22K18_12 mRNA, complete cds
          Length = 2056

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 432  cacggtaatggaaaaggctgatattcca 459
            ||||||||||||||||| |||| |||||
Sbjct: 1652 cacggtaatggaaaagggtgatgttcca 1625

>gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F19C24 genomic sequence, complete
             sequence
          Length = 124511

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   ttttattccaacatgagaga 175
             ||||||||||||||||||||
Sbjct: 76956 ttttattccaacatgagaga 76937

>gb|BT002523.1| Arabidopsis thaliana threonine dehydratase/deaminase (OMR1)
            (At3g10050) mRNA, complete cds
          Length = 2223

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 432  cacggtaatggaaaaggctgatattcca 459
            ||||||||||||||||| |||| |||||
Sbjct: 1653 cacggtaatggaaaagggtgatgttcca 1626

>gb|AF221984.1|AF221984 Arabidopsis thaliana threonine dehydratase/deaminase (OMR1) gene,
            complete cds
          Length = 3803

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 432  cacggtaatggaaaaggctgatattcca 459
            ||||||||||||||||| |||| |||||
Sbjct: 3540 cacggtaatggaaaagggtgatgttcca 3513

>gb|AF096281.1|AF096281 Arabidopsis thaliana threonine dehydratase/deaminase (OMR1) mRNA,
            complete cds
          Length = 1779

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 432  cacggtaatggaaaaggctgatattcca 459
            ||||||||||||||||| |||| |||||
Sbjct: 1633 cacggtaatggaaaagggtgatgttcca 1606

>emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in linkage group 5,
             complete sequence
          Length = 163926

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   ggttttattccaacatgaga 173
             ||||||||||||||||||||
Sbjct: 89258 ggttttattccaacatgaga 89239

>emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in linkage group 5,
             complete sequence
          Length = 143013

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   ggttttattccaacatgaga 173
             ||||||||||||||||||||
Sbjct: 90996 ggttttattccaacatgaga 90977


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,468,119
Number of Sequences: 3902068
Number of extensions: 5468119
Number of successful extensions: 64512
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64434
Number of HSP's gapped (non-prelim): 78
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)