ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2n18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor ... 146 6e-35
2ABA2_PRUAR (O81360) Zeaxanthin epoxidase, chloroplast precursor ... 142 8e-34
3ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor ... 140 4e-33
4ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor ... 124 2e-28
5NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter ... 39 0.013
6FRAH_ANASP (P46017) Protein fraH 37 0.048
7DMA1_SCHPO (Q10322) Protein dma1 32 2.6
8PRPE_SALTY (P55912) Propionate--CoA ligase (EC 6.2.1.17) (Propio... 30 7.7

>ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 663

 Score =  146 bits (369), Expect = 6e-35
 Identities = 76/148 (51%), Positives = 93/148 (62%)
 Frame = -1

Query: 731 WFQDDDALEQAMGGEWYLFPMSSGDDSALQPIRLIRDEQRTLSIGXXXXXXXXXXXXXXX 552
           WF+DDDALE+A   EW L P +   ++AL+ + L RDE    +IG               
Sbjct: 517 WFEDDDALERATDAEWLLLP-AGNSNAALETLVLSRDENMPCNIGSVSHANIPGKSVVIP 575

Query: 551 XPQVSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSD 372
            PQVSE+HA I+ K   F++TDL SEHGTW  DNEGRRYR  PNFP RFHPSD IEFGSD
Sbjct: 576 LPQVSEMHARISYKGGAFFVTDLRSEHGTWITDNEGRRYRASPNFPTRFHPSDIIEFGSD 635

Query: 371 KKAMFRVKVLSALPYDSARGGGEVLQAA 288
           KKA FRVKV+   P  +A+   + + AA
Sbjct: 636 KKAAFRVKVMKFPPKTAAKEERQAVGAA 663



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>ABA2_PRUAR (O81360) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90) (PA-ZE)
          Length = 661

 Score =  142 bits (359), Expect = 8e-34
 Identities = 80/148 (54%), Positives = 94/148 (63%)
 Frame = -1

Query: 731 WFQDDDALEQAMGGEWYLFPMSSGDDSALQPIRLIRDEQRTLSIGXXXXXXXXXXXXXXX 552
           WF+DDDALE+A+ GEWYL P    D+ A Q I L RDE+    IG               
Sbjct: 518 WFEDDDALERAIDGEWYLIPCGQ-DNDASQLICLNRDEKNPCIIGSAPHGDVSGISIAIP 576

Query: 551 XPQVSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSD 372
            PQVSE+HA I+ K+  FYLTDL SEHGTW  D EG+RYR+PPNFP RF PSDAIE GS 
Sbjct: 577 KPQVSEMHARISYKDGAFYLTDLRSEHGTWIADIEGKRYRVPPNFPARFRPSDAIEIGSQ 636

Query: 371 KKAMFRVKVLSALPYDSARGGGEVLQAA 288
           K A FRVKV+ + P    + G  +LQAA
Sbjct: 637 KVA-FRVKVMKSSPGSVEKEG--ILQAA 661



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>ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 669

 Score =  140 bits (353), Expect = 4e-33
 Identities = 72/130 (55%), Positives = 84/130 (64%)
 Frame = -1

Query: 731 WFQDDDALEQAMGGEWYLFPMSSGDDSALQPIRLIRDEQRTLSIGXXXXXXXXXXXXXXX 552
           WF+DDDALE+A   EW L P  +G  S L+ I L RDE    ++G               
Sbjct: 523 WFEDDDALERATDAEWLLLPAGNGS-SGLEAIVLSRDEDVPCTVGSISHTNIPGKSIVLP 581

Query: 551 XPQVSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSD 372
            PQVSE+HA I+CK+  F++TDL SEHGTW  DNEGRRYR  PNFP RFHPSD IEFGSD
Sbjct: 582 LPQVSEMHARISCKDGAFFVTDLRSEHGTWVTDNEGRRYRTSPNFPTRFHPSDVIEFGSD 641

Query: 371 KKAMFRVKVL 342
            KA FRVK +
Sbjct: 642 -KAAFRVKAM 650



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>ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90) (Xanthophyll epoxidase) (Beta-cyclohexenyl
           epoxidase)
          Length = 660

 Score =  124 bits (312), Expect = 2e-28
 Identities = 66/148 (44%), Positives = 86/148 (58%)
 Frame = -1

Query: 731 WFQDDDALEQAMGGEWYLFPMSSGDDSALQPIRLIRDEQRTLSIGXXXXXXXXXXXXXXX 552
           WF+DDDALE+A   EW L P +   ++AL+ + L RDE    +IG               
Sbjct: 515 WFEDDDALERATDAEWLLLP-AGNSNAALETLVLSRDENMPCTIGSVSHANIPGKSVVIP 573

Query: 551 XPQVSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSD 372
             QVS++HA I+     F  T   S+HGTWF DNEGRRYR+ PNFP+RFH SD I FGSD
Sbjct: 574 LSQVSDMHARISYNGGAFLGTAFRSDHGTWFIDNEGRRYRVSPNFPMRFHSSDVIVFGSD 633

Query: 371 KKAMFRVKVLSALPYDSARGGGEVLQAA 288
            KA FR+K +   P  +A+   + + AA
Sbjct: 634 -KAAFRIKAMKFAPKTAAKEDRQAVGAA 660



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>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)|
           (Solute carrier family 4 anion exchanger member 1
           adapter protein) (Lung cancer oncogene 3 protein)
          Length = 796

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -1

Query: 503 GFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKK 366
           GFYL DLGS HGT+ N     + R+PP    R H    + FG   +
Sbjct: 230 GFYLYDLGSTHGTFLN-----KTRIPPRTYCRVHVGHVVRFGGSTR 270



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>FRAH_ANASP (P46017) Protein fraH|
          Length = 289

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = -1

Query: 542 VSEIHATITCKNKGFYLTDLGSEHGTWFND---NEGRRYRLPPNFPVRFHPSDAIEF 381
           VS +HA I  +    Y+ D+GS +GT+ N+     G R+RL P   +     D + F
Sbjct: 228 VSRVHADIRLEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 284



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>DMA1_SCHPO (Q10322) Protein dma1|
          Length = 267

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -1

Query: 542 VSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPP----NFPVRFHPSDAIEFGS 375
           VS  HA I  +N  +Y+ D+GS  GT+ N       RL P    + P     +D ++ G+
Sbjct: 84  VSRRHAQIFYENNTWYIQDMGSSSGTFLN-----HVRLSPPSKTSKPYPISNNDILQLGA 138

Query: 374 D 372
           D
Sbjct: 139 D 139



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>PRPE_SALTY (P55912) Propionate--CoA ligase (EC 6.2.1.17) (Propionyl-CoA|
           synthetase)
          Length = 628

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 21/59 (35%), Positives = 27/59 (45%)
 Frame = +2

Query: 260 DKGWLKSPLMLPAELLPRLSPSRMGAR*APSPGTWPSCLNQTRWHPKGENEPGSLEVTG 436
           + GW   P+M  A  L    PSR+G+   P  G     LN+    P G NE G L + G
Sbjct: 390 ESGW---PIMALARALDD-RPSRLGSPGVPMYGYNVQLLNEVTGEPCGINEKGMLVIEG 444


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,195,614
Number of Sequences: 219361
Number of extensions: 2304426
Number of successful extensions: 5307
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5302
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7592921998
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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