ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3c17 |
|---|---|
| Clone Library Name | barley_pub |
>TCPQ_PONPY (Q5RAP1) T-complex protein 1 subunit theta (TCP-1-theta)| (CCT-theta) Length = 547 Score = 53.9 bits (128), Expect = 3e-07 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Frame = -3 Query: 513 YAEHAAGNMKVGIDLEGG--ACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 YA H GN VG+D+E A KD I D Y+ K +A+K + +A TVLRVDQIIMA Sbjct: 467 YAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQIIMA 526 Query: 339 K 337 K Sbjct: 527 K 527
>TCPQ_HUMAN (P50990) T-complex protein 1 subunit theta (TCP-1-theta)| (CCT-theta) (NY-REN-15 antigen) Length = 547 Score = 53.9 bits (128), Expect = 3e-07 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Frame = -3 Query: 513 YAEHAAGNMKVGIDLEGG--ACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 YA H GN VG+D+E A KD I D Y+ K +A+K + +A TVLRVDQIIMA Sbjct: 467 YAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQIIMA 526 Query: 339 K 337 K Sbjct: 527 K 527
>TCPQ_MOUSE (P42932) T-complex protein 1 subunit theta (TCP-1-theta)| (CCT-theta) Length = 547 Score = 53.5 bits (127), Expect = 3e-07 Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Frame = -3 Query: 513 YAEHAAGNMKVGIDLEGG--ACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 Y+ H GN VG+D+E A KD I D Y+ K +A+K + +A TVLRVDQIIMA Sbjct: 467 YSVHQEGNKNVGLDIEAEVPAVKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQIIMA 526 Query: 339 K 337 K Sbjct: 527 K 527
>TCPQ_CHICK (Q6EE31) T-complex protein 1 subunit theta (TCP-1-theta)| (CCT-theta) Length = 547 Score = 52.4 bits (124), Expect = 7e-07 Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = -3 Query: 513 YAEHAAGNMKVGIDLEG--GACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 YA H GN VG D+E A KD I D Y+ K + +K + +A TVLRVDQIIMA Sbjct: 467 YAVHQEGNKNVGFDIEAEAAAVKDMLEAGILDTYLGKYWGIKLATNAAVTVLRVDQIIMA 526 Query: 339 K 337 K Sbjct: 527 K 527
>TCPQ_CANAL (P47828) T-complex protein 1 subunit theta (TCP-1-theta)| (CCT-theta) Length = 540 Score = 43.9 bits (102), Expect = 3e-04 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Frame = -3 Query: 513 YAEHAAGN-MKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 +A HA ++ GID++ G D +++ D+ TK A+ + DA T+L +DQIIMAK Sbjct: 464 HAAHAEDTGLRAGIDIDSGEVADTAVL---DILATKKSAIDLAVDATNTILSIDQIIMAK 520
>TCPQ_YEAST (P47079) T-complex protein 1 subunit theta (TCP-1-theta)| (CCT-theta) Length = 568 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 3/51 (5%) Frame = -3 Query: 480 GIDLEGGA---CKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 G+D++G + KD I+D+ TK FA+ + +A TVL +DQIIMAK Sbjct: 498 GVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAK 548
>TCPG_YEAST (P39077) T-complex protein 1 subunit gamma (TCP-1-gamma)| (CCT-gamma) Length = 534 Score = 42.7 bits (99), Expect = 6e-04 Identities = 21/55 (38%), Positives = 31/55 (56%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 A+HA GN GID + G D IW+ V K ++K + ++ C +LRVD I+ Sbjct: 473 AKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIV 527
>TCPB_CAEEL (P47207) T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)| Length = 529 Score = 40.8 bits (94), Expect = 0.002 Identities = 22/57 (38%), Positives = 32/57 (56%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 AEHA G +GID+E G D + + + + Y K + +A+A +LRVD II A Sbjct: 461 AEHANGRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKA 517
>TCPQ_SCHPO (P78921) Probable T-complex protein 1 subunit theta (TCP-1-theta)| (CCT-theta) Length = 546 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Frame = -3 Query: 510 AEHAAGNMKVGIDLE--GGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 A H +G+D+E DA I+D+ + K A++ + + V TVL VDQ++M+K Sbjct: 470 AHHKENGESIGVDVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLTVLNVDQVVMSK 529
>TCPB_HUMAN (P78371) T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)| Length = 534 Score = 40.0 bits (92), Expect = 0.004 Identities = 21/57 (36%), Positives = 31/57 (54%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 A H+ GN G+D+ G D +I+ I + + K L +A+A +LRVD II A Sbjct: 466 AAHSEGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKA 522
>THSA_THEAC (P48424) Thermosome subunit alpha (Thermosome subunit 1)| (Chaperonin alpha subunit) Length = 545 Score = 39.3 bits (90), Expect = 0.006 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 AEH G + VG+DL+ D + D K+ AL+ + + +LR+D +I +K Sbjct: 465 AEHEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASK 522
>TCPB_MOUSE (P80314) T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)| Length = 534 Score = 38.9 bits (89), Expect = 0.008 Identities = 19/57 (33%), Positives = 33/57 (57%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 A H+ G++ G+D++ G D +++ I + + K L +A+A +LRVD II A Sbjct: 466 AAHSEGHITAGLDMKEGTIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKA 522
>TCPG_SCHPO (O74341) T-complex protein 1 subunit gamma (TCP-1-gamma)| (CCT-gamma) Length = 528 Score = 38.9 bits (89), Expect = 0.008 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 A+HA G GID E G D +W+ K ++K + ++ C +LRVD I+ Sbjct: 466 AKHAEGQHSFGIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIV 520
>TCPZ_MOUSE (P80317) T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta)| (CCT-zeta-1) Length = 530 Score = 36.6 bits (83), Expect = 0.042 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 AEH+ VG+DL G A+ M +WD Y K L +L VD+I+ A Sbjct: 467 AEHSESGQLVGVDLSTGEPMVAAEMGVWDNYCVKKQLLHSCTVIATNILLVDEIMRA 523
>TCPG_OXYGR (O00782) T-complex protein 1 subunit gamma (TCP-1-gamma)| (CCT-gamma) (Chaperonin subunit CCTV gamma) Length = 559 Score = 36.2 bits (82), Expect = 0.055 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -3 Query: 480 GIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 GID G +D +WD K LK S +A C +LR+D I+ Sbjct: 482 GIDGNTGKIRDMRESNVWDPISVKQQTLKTSIEATCMLLRIDDIV 526
>TCPA_AMBME (P50157) T-complex protein 1 subunit alpha (TCP-1-alpha)| (CCT-alpha) (Fragment) Length = 173 Score = 35.8 bits (81), Expect = 0.071 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Frame = -3 Query: 492 NMK-VGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 N+K +G+DL G +D +++ + K+ +LK++ +A T+LR+D +I Sbjct: 100 NLKWIGLDLVNGKARDNKQAGVFEPTMVKTKSLKFATEAAITILRIDDLI 149
>TCPZ_PONPY (Q5RCD2) T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta)| Length = 530 Score = 35.0 bits (79), Expect = 0.12 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 AEH+ VG+DL G A+ + +WD Y K L +L VD+I+ A Sbjct: 467 AEHSESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRA 523
>TCPZ_HUMAN (P40227) T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta)| (CCT-zeta-1) (Tcp20) (HTR3) (Acute morphine dependence-related protein 2) Length = 530 Score = 35.0 bits (79), Expect = 0.12 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 AEH+ VG+DL G A+ + +WD Y K L +L VD+I+ A Sbjct: 467 AEHSESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRA 523
>TCPA_HUMAN (P17987) T-complex protein 1 subunit alpha (TCP-1-alpha)| (CCT-alpha) Length = 556 Score = 35.0 bits (79), Expect = 0.12 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = -3 Query: 492 NMK-VGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 N+K +G+DL G +D +++ + K +LK++ +A T+LR+D +I Sbjct: 482 NLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
>TCPH_CHICK (Q5ZJK8) T-complex protein 1 subunit eta (TCP-1-eta) (CCT-eta)| Length = 553 Score = 34.7 bits (78), Expect = 0.16 Identities = 16/55 (29%), Positives = 29/55 (52%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 A+HA G M G+D+ D +W+ + + AL +++A C ++ VD+ I Sbjct: 466 AKHAQGGMWYGVDVNNEDIADNFEACVWEPAIVRINALTAASEAACLIVSVDETI 520
>TCPA_CAEEL (P41988) T-complex protein 1 subunit alpha (TCP-1-alpha)| (CCT-alpha) Length = 549 Score = 34.7 bits (78), Expect = 0.16 Identities = 16/45 (35%), Positives = 28/45 (62%) Frame = -3 Query: 480 GIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 G+DLE G +D I + ++K +LK++ +A T+LR+D +I Sbjct: 490 GLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLI 534
>TCPA_PALPA (Q9W790) T-complex protein 1 subunit alpha (TCP-1-alpha)| (CCT-alpha) Length = 559 Score = 34.3 bits (77), Expect = 0.21 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Frame = -3 Query: 492 NMK-VGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 N+K +G+DL G +D +++ + K+ +LK++ +A T+LR+D +I Sbjct: 485 NLKWIGLDLINGKPRDNKQAGVFEPTLVKTKSLKFATEAAITILRIDDLI 534
>TCPZ_CHICK (Q5ZJ54) T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta)| Length = 529 Score = 34.3 bits (77), Expect = 0.21 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 AEHA G+DL G A+ IWD Y K L +L VD+I+ A Sbjct: 466 AEHAESGQLTGVDLNTGEPMVAAAAGIWDNYNVKKQLLHSCTVIASNILLVDEIMRA 522
>TCPZ_RABIT (O77622) T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta)| Length = 530 Score = 33.9 bits (76), Expect = 0.27 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = -3 Query: 507 EHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 EH+ VG+DL G A+ + IWD Y K L +L VD+I+ A Sbjct: 468 EHSESGQLVGVDLNTGEPMVAAEVGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 523
>TCPA_CRIGR (P18279) T-complex protein 1 subunit alpha (TCP-1-alpha)| (CCT-alpha) (65 kDa antigen) Length = 556 Score = 33.9 bits (76), Expect = 0.27 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = -3 Query: 492 NMK-VGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 N+K +G+DL G +D +++ + K +LK++ +A T+LR+D +I Sbjct: 482 NLKWIGLDLINGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
>TCPA_SCHMA (Q94757) T-complex protein 1 subunit alpha (TCP-1-alpha)| (CCT-alpha) Length = 545 Score = 33.9 bits (76), Expect = 0.27 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = -3 Query: 498 AGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 A N G+DL D + +++ V+K +LK++ +A T+LR+D +I K Sbjct: 478 AHNKWWGLDLNNQYVADCKEIGVFEPLVSKIKSLKFATEAAITILRIDDLIKLK 531
>TCPW_HUMAN (Q92526) T-complex protein 1 subunit zeta-2 (TCP-1-zeta-2)| (CCT-zeta-2) (TCP-1-zeta-like) (CCT-zeta-like) (Testis-specific Tcp20) (Testis-specific protein TSA303) Length = 529 Score = 33.9 bits (76), Expect = 0.27 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 AEH VG+DL G A+ +WD Y K L +L VD+I+ A Sbjct: 467 AEHVESKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRA 523
>TCPH_MOUSE (P80313) T-complex protein 1 subunit eta (TCP-1-eta) (CCT-eta)| Length = 544 Score = 33.9 bits (76), Expect = 0.27 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 A HA G M G+D+ D +W+ + + AL +++A C ++ VD+ I Sbjct: 466 ARHAQGGMWYGVDINNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETI 520
>TCPA_RAT (P28480) T-complex protein 1 subunit alpha (TCP-1-alpha)| (CCT-alpha) Length = 556 Score = 33.5 bits (75), Expect = 0.35 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = -3 Query: 492 NMK-VGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 N+K +G+DL G +D +++ + K +LK++ +A T+LR+D +I Sbjct: 482 NLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
>TCPA2_MOUSE (P11983) T-complex protein 1 subunit alpha B (TCP-1-alpha)| (CCT-alpha) (Tailless complex polypeptide 1B) (TCP-1-B) Length = 556 Score = 33.5 bits (75), Expect = 0.35 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = -3 Query: 492 NMK-VGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 N+K +G+DL G +D +++ + K +LK++ +A T+LR+D +I Sbjct: 482 NLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
>TCPA1_MOUSE (P11984) T-complex protein 1 subunit alpha A (TCP-1-alpha)| (CCT-alpha) (Tailless complex polypeptide 1A) (TCP-1-A) Length = 556 Score = 33.5 bits (75), Expect = 0.35 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = -3 Query: 492 NMK-VGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 N+K +G+DL G +D +++ + K +LK++ +A T+LR+D +I Sbjct: 482 NLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
>THSA_SULSO (Q9V2S9) Thermosome subunit alpha (Thermosome subunit 1)| (Chaperonin alpha subunit) (Thermophilic factor 55 alpha) (TF55-alpha) Length = 559 Score = 33.1 bits (74), Expect = 0.46 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGG-ACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 A HA G G+D+ GG D + I + KS LK + +A +L++D +I A Sbjct: 473 ARHAKGLSNTGVDVIGGKIVDDVYALNIIEPIRVKSQVLKSATEAATAILKIDDLIAA 530
>TCPA_MONDO (Q9XT06) T-complex protein 1 subunit alpha (TCP-1-alpha)| (CCT-alpha) Length = 557 Score = 33.1 bits (74), Expect = 0.46 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = -3 Query: 492 NMK-VGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 N+K +G+DL G +D +++ + K +LK++ +A T+LR+D +I Sbjct: 482 NLKWIGLDLVNGKPRDNRQTGVFEPTMVKVKSLKFATEAAITILRIDDLI 531
>TCPG_TETPY (P54408) T-complex protein 1 subunit gamma (TCP-1-gamma)| (CCT-gamma) Length = 559 Score = 32.7 bits (73), Expect = 0.60 Identities = 13/50 (26%), Positives = 24/50 (48%) Frame = -3 Query: 495 GNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 GN +GI+ G D +W+ K K + ++ C +LR+D ++ Sbjct: 477 GNKFIGIEGNSGKITDMGEANVWEPIAVKLQVYKTAIESACMLLRIDDVV 526
>TCPW_MOUSE (Q61390) T-complex protein 1 subunit zeta-2 (TCP-1-zeta-2)| (CCT-zeta-2) (Cctz-2) Length = 530 Score = 32.3 bits (72), Expect = 0.79 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = -3 Query: 507 EHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 +HA +GIDL G A+ IWD Y K L +L VD+I+ A Sbjct: 468 KHAESKELLGIDLNTGEPMAAAEAGIWDNYCVKKHLLHSCTVIATNILLVDEIMRA 523
>THS_METKA (P50016) Thermosome subunit (Chaperonin-like complex) (CLIC)| Length = 545 Score = 32.3 bits (72), Expect = 0.79 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 A+H G + GID+ G KD + + K+ AL + +A +LR+D +I A+ Sbjct: 470 AKHEDGQVTAGIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDVIAAR 527
>THSA_SULTO (O24734) Thermosome subunit alpha (Thermosome subunit 1)| (Chaperonin alpha subunit) Length = 559 Score = 32.0 bits (71), Expect = 1.0 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASI-MKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 A+HA G + G+D+ G D + + + + K+ LK + +A +L++D +I A Sbjct: 474 AKHAKGLINAGVDVMNGKIADDMLALNVLEPVRVKAQVLKSAVEAATAILKIDDLIAA 531
>THSB_ARCFU (O28821) Thermosome subunit beta (Thermosome subunit 2) (Chaperonin| beta subunit) Length = 545 Score = 32.0 bits (71), Expect = 1.0 Identities = 16/58 (27%), Positives = 28/58 (48%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 A H G G+D++ G D +++ K+ A+ + + +LR+D II AK Sbjct: 468 AAHEKGQKYAGVDVDTGKVVDMKERGVFEPLRVKTQAIGSATEVAVMILRIDDIIAAK 525
>THSA_THEK1 (P61112) Thermosome subunit alpha (Thermosome subunit 1)| (Chaperonin alpha subunit) Length = 548 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 +EH + +GID+ G D I + K A+K +++A +LR+D +I AK Sbjct: 468 SEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 525
>THSA_PYRKO (P61111) Thermosome subunit alpha (Thermosome subunit 1)| (Chaperonin alpha subunit) Length = 548 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 +EH + +GID+ G D I + K A+K +++A +LR+D +I AK Sbjct: 468 SEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 525
>THSA_SULSH (P46219) Thermosome subunit alpha (Thermosome subunit 1)| (Chaperonin alpha subunit) (Thermophilic factor 55 alpha) (TF55-alpha) (Ring complex subunit alpha) (Thermophilic factor 56) Length = 560 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGG-ACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 A HA G G+D+ GG D + I + K+ LK + +A +L++D +I A Sbjct: 473 ARHAKGLTNTGVDVIGGKIVDDVYALNIIEPIRVKAQVLKSATEAATAILKIDDLIAA 530
>TCPH_SCHPO (P87153) Probable T-complex protein 1 subunit eta (TCP-1-eta)| (CCT-eta) Length = 558 Score = 32.0 bits (71), Expect = 1.0 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = -3 Query: 507 EHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 +HA G M G+D++ + +W+ KS A+ + +A +L VD+ I Sbjct: 472 QHAKGEMWAGVDMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETI 525
>TCPG_THAWE (Q9LKI7) T-complex protein 1 subunit gamma (TCP-1-gamma)| (CCT-gamma) Length = 558 Score = 31.6 bits (70), Expect = 1.3 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = -3 Query: 480 GIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 GID G D +W+ + K +K + ++ C +LR+D I+ Sbjct: 506 GIDGTTGKLVDMEEFGVWEPFSVKVQTIKTAVESACMILRIDDIV 550
>TCPG_DROME (P48605) T-complex protein 1 subunit gamma (TCP-1-gamma)| (CCT-gamma) Length = 544 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = -3 Query: 510 AEHAA----GNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 A+HA+ G GID E G D ++ IW+ K K + + +LR+D I+ Sbjct: 464 AKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIV 522
>TCPH_PONPY (Q5R5C8) T-complex protein 1 subunit eta (TCP-1-eta) (CCT-eta)| Length = 543 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 A HA G G+D+ D +W+ + + AL +++A C ++ VD+ I Sbjct: 466 ARHAQGGTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI 520
>TCPH_HUMAN (Q99832) T-complex protein 1 subunit eta (TCP-1-eta) (CCT-eta)| (HIV-1 Nef-interacting protein) Length = 543 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 A HA G G+D+ D +W+ + + AL +++A C ++ VD+ I Sbjct: 466 ARHAQGGTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI 520
>YJA9_YEAST (P47078) Hypothetical 12.7 kDa protein in CCT3-CCT8 intergenic| region Length = 108 Score = 31.2 bits (69), Expect = 1.8 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +1 Query: 310 LRGSRPARRLCHDNLVNS*NSTYSIC 387 LR S R LCHDNLVN +S+ S C Sbjct: 47 LRCSWTTRLLCHDNLVNGKHSSCSFC 72
>TCPA_DROME (P12613) T-complex protein 1 subunit alpha (TCP-1-alpha)| (CCT-alpha) Length = 557 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -3 Query: 480 GIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 G+DL G +D + + ++K +LK++ +A T+LR+D +I Sbjct: 490 GLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 534
>LYC_CRAVI (P83673) Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)| (Fragments) Length = 119 Score = 30.4 bits (67), Expect = 3.0 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 13/100 (13%) Frame = -2 Query: 340 KAGGRAATPSTRCNG*RLVFLCTLVSRVSCC------------GIFMQKTVSSYLGLSNR 197 +AGGR S C+G LC+ R CC G+ QK + + + Sbjct: 7 RAGGRCQHDSITCSGRTRTGLCSGGVRRRCCVPSSSNSGSFSTGMVSQKCLRCICNVESA 66 Query: 196 FWL-LGLQGWWLMSCGGFASSSGTVLPVYHMITRGTCSSS 80 +W+ G G +C + S + Y + R CS+S Sbjct: 67 YWIDCGSPGGDWKTCANNIACSSRCVQAY--MARSGCSNS 104
>DNAA_PHOLL (Q7NAD3) Chromosomal replication initiator protein dnaA| Length = 462 Score = 30.4 bits (67), Expect = 3.0 Identities = 19/81 (23%), Positives = 36/81 (44%) Frame = +3 Query: 63 GSYNNKLDEQVPLVIM*YTGKTVPEELANPPQDISHQPCNPSSQNLLLKPR*DETVFCMK 242 G N+ +VPL+ K V + + P + ++H P P+ QN ++P D T Sbjct: 61 GLLNDFCGAEVPLLRFEVGNKPVSQNDSPPQRVVTHTPVAPAPQNTSVRPSWDNTAV--- 117 Query: 243 IPQHDTRETRVHRKTNLHPLH 305 + + ++N++P H Sbjct: 118 -------QPELSYRSNVNPKH 131
>TCPZ_SCHPO (O94515) T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta)| Length = 535 Score = 30.0 bits (66), Expect = 3.9 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = -3 Query: 507 EHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 E A+ KVG+DL+ G D + I+D Y L + ++ VDQI+ A Sbjct: 469 EEASEGYKVGLDLKTGMPFDPEVEGIYDNYRVIRHMLHSATVIASNLISVDQILRA 524
>TCPZ_CAEEL (P46550) T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta)| Length = 539 Score = 30.0 bits (66), Expect = 3.9 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = -3 Query: 501 AAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 A ++ VG+DLE G + IWD K ++ + C +L VD+++ A Sbjct: 477 AGPDIAVGLDLETGGAVEPQ--GIWDNVTVKKNSISSATVLACNLLLVDEVMRA 528
>THSA_HALSA (Q9HN70) Thermosome subunit alpha (Thermosome subunit 1)| (Chaperonin alpha subunit) Length = 562 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/57 (26%), Positives = 29/57 (50%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 ++H G+ + G+D G D I + K+ A++ + +A +LR+D +I A Sbjct: 465 SQHDGGDTEAGLDAYNGDVIDMESEGIVEPLRVKTQAIESATEAATMILRIDDVIAA 521
>TCPB_YEAST (P39076) T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)| Length = 527 Score = 30.0 bits (66), Expect = 3.9 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = -3 Query: 480 GIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 G+DL G D + I + Y K + +++A +LRVD II A+ Sbjct: 471 GLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRAR 518
>THS_PYRHO (O57762) Thermosome subunit (Chaperonin subunit)| Length = 549 Score = 29.3 bits (64), Expect = 6.7 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 A H +GID+ G D + + K A+K +++A +LR+D +I A Sbjct: 468 AAHKEKGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAA 524
>TCPG_XENLA (P50143) T-complex protein 1 subunit gamma (TCP-1-gamma)| (CCT-gamma) Length = 547 Score = 29.3 bits (64), Expect = 6.7 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = -3 Query: 480 GIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQII 346 G+D E G D + IW+ K K + + +LR+D I+ Sbjct: 478 GVDGEAGVLADMKELGIWEPLAVKLQTYKTAVETAILLLRIDDIV 522
>TCPB_SCHPO (Q10147) Probable T-complex protein 1 subunit beta (TCP-1-beta)| (CCT-beta) Length = 527 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMA 340 A H GN +G+D++ G D I + K + ++ +LRVD I+ A Sbjct: 463 AAHYDGNDTMGLDMDEGEIADMRAKGILEALKLKQAVVSSGSEGAQLLLRVDTILKA 519
>THS_PYRAB (Q9V2Q7) Thermosome subunit (Chaperonin subunit)| Length = 550 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/58 (27%), Positives = 28/58 (48%) Frame = -3 Query: 510 AEHAAGNMKVGIDLEGGACKDASIMKIWDLYVTKSFALKYSADAVCTVLRVDQIIMAK 337 A H +GID+ G D + + K A+K +++A +LR+D +I A+ Sbjct: 468 AAHKEKGPTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAAQ 525 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,015,845 Number of Sequences: 219361 Number of extensions: 1524377 Number of successful extensions: 3341 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 3233 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3336 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
