ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3c17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470005.1| Oryza sativa (japonica cultivar-group), mRNA 167 4e-38
2dbj|AK100651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 4e-38
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 109 9e-21
4gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 109 9e-21
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 109 9e-21
6gb|AY109440.1| Zea mays CL8405_1 mRNA sequence 86 1e-13
7gb|AC133218.3| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
8dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
10gb|BC045040.1| Xenopus laevis chaperonin containing TCP1, subuni... 46 0.11
11emb|CR848261.2| Xenopus tropicalis finished cDNA, clone TNeu069e02 46 0.11
12gb|AY251815.1| Bigelowiella natans chaperonin-containing TCP-1 t... 42 1.8
13dbj|AK131417.1| Homo sapiens cDNA FLJ16527 fis, clone OCBBF20095... 42 1.8
14emb|CR616392.1| full-length cDNA clone CS0DA004YP22 of Neuroblas... 42 1.8
15gb|AC009990.9| Homo sapiens chromosome 05 clone RP11-94N1, compl... 42 1.8
16gb|AC116339.2| Homo sapiens chromosome 5 clone RP11-1006G2, comp... 42 1.8
17gb|AC097510.3| Homo sapiens BAC clone RP11-390C19 from 4, comple... 42 1.8
18gb|AC092798.3| Homo sapiens chromosome 3 clone RP11-653E17, comp... 42 1.8
19gb|AC010259.7| Homo sapiens chromosome 5 clone CTC-454M9, comple... 42 1.8
20gb|AC022148.6| Homo sapiens chromosome 19 clone CTD-3064H18, com... 42 1.8
21ref|NM_001013659.1| Homo sapiens similar to zinc finger protein ... 42 1.8
22gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 42 1.8
23gb|AC146033.2| Pan troglodytes BAC clone RP43-14B18 from 7, comp... 40 7.0
24emb|Z93382.1|CEF45G2 Caenorhabditis elegans Cosmid F45G2, comple... 40 7.0
25gb|AC006463.4| Homo sapiens BAC clone RP11-395G17 from 7, comple... 40 7.0
26gb|AC102663.6| Mus musculus chromosome 6, clone RP23-244M15, com... 40 7.0
27ref|NM_001007874.1| Xenopus tropicalis cct8 protein (cct8), mRNA 40 7.0
28gb|BC080140.1| Xenopus tropicalis cct8 protein, mRNA (cDNA clone... 40 7.0
29emb|AL590031.6| Human DNA sequence from clone RP11-285F11 on chr... 40 7.0
30dbj|AK139153.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 7.0
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
32gb|AC079181.3|AC079181 Mus musculus strain C57BL/6J chromosome 1... 40 7.0
33gb|AC135977.5| Homo sapiens chromosome 11, clone RP11-61N20, com... 40 7.0
34gb|AC118942.4| Homo sapiens chromosome 11, clone RP11-15P23, com... 40 7.0
35dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
36emb|BX004813.5| Zebrafish DNA sequence from clone CH211-55K22 in... 40 7.0
37gb|AF162715.2|AF162715 Homo sapiens Skn-1a/i-like mRNA 40 7.0
38tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy ... 40 7.0
39dbj|AP001150.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.0 
>ref|XM_470005.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2070

 Score =  167 bits (84), Expect = 4e-38
 Identities = 153/176 (86%)
 Strand = Plus / Minus

                                                                        
Query: 335  ggctttgccatgataatctggtcaactcgtaaaacagtacatacagcatctgctgagtat 394
            |||||||||||||| ||||||||||| || |  ||||||||| ||||||| || ||||||
Sbjct: 1694 ggctttgccatgatgatctggtcaacccgcagtacagtacatgcagcatccgcagagtat 1635

                                                                        
Query: 395  tttagagcaaaggactttgtaacatagagatcccatattttcatgattgaagcatccttg 454
            |||||||| ||  ||||||||||||| || ||||||||||||||||||||  ||||||||
Sbjct: 1634 tttagagcgaataactttgtaacataaaggtcccatattttcatgattgagacatccttg 1575

                                                                    
Query: 455  caagcacctccctccaagtcaatgccaactttcatattaccagcagcatgctcagc 510
            ||| ||||| | ||||||||||| ||||||||| |||| ||| ||||||| |||||
Sbjct: 1574 caaccaccttcttccaagtcaataccaactttcgtattcccaccagcatgttcagc 1519
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>dbj|AK100651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D11, full
            insert sequence
          Length = 2070

 Score =  167 bits (84), Expect = 4e-38
 Identities = 153/176 (86%)
 Strand = Plus / Minus

                                                                        
Query: 335  ggctttgccatgataatctggtcaactcgtaaaacagtacatacagcatctgctgagtat 394
            |||||||||||||| ||||||||||| || |  ||||||||| ||||||| || ||||||
Sbjct: 1694 ggctttgccatgatgatctggtcaacccgcagtacagtacatgcagcatccgcagagtat 1635

                                                                        
Query: 395  tttagagcaaaggactttgtaacatagagatcccatattttcatgattgaagcatccttg 454
            |||||||| ||  ||||||||||||| || ||||||||||||||||||||  ||||||||
Sbjct: 1634 tttagagcgaataactttgtaacataaaggtcccatattttcatgattgagacatccttg 1575

                                                                    
Query: 455  caagcacctccctccaagtcaatgccaactttcatattaccagcagcatgctcagc 510
            ||| ||||| | ||||||||||| ||||||||| |||| ||| ||||||| |||||
Sbjct: 1574 caaccaccttcttccaagtcaataccaactttcgtattcccaccagcatgttcagc 1519
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  109 bits (55), Expect = 9e-21
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 408      actttgtaacatagagatcccatattttcatgattgaagcatccttgcaagcacctccct 467
                ||||||||||||| || ||||||||||||||||||||  ||||||||||| ||||| | |
Sbjct: 33293424 actttgtaacataaaggtcccatattttcatgattgagacatccttgcaaccaccttctt 33293365

                                                           
Query: 468      ccaagtcaatgccaactttcatattaccagcagcatgctcagc 510
                |||||||||| ||||||||| |||| ||| ||||||| |||||
Sbjct: 33293364 ccaagtcaataccaactttcgtattcccaccagcatgttcagc 33293322



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 368      acagtacatacagcatctgctgagtattttagagc 402
                ||||||||| ||||||| || ||||||||||||||
Sbjct: 33293646 acagtacatgcagcatccgcagagtattttagagc 33293612
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>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score =  109 bits (55), Expect = 9e-21
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                         
Query: 408   actttgtaacatagagatcccatattttcatgattgaagcatccttgcaagcacctccct 467
             ||||||||||||| || ||||||||||||||||||||  ||||||||||| ||||| | |
Sbjct: 49940 actttgtaacataaaggtcccatattttcatgattgagacatccttgcaaccaccttctt 49881

                                                        
Query: 468   ccaagtcaatgccaactttcatattaccagcagcatgctcagc 510
             |||||||||| ||||||||| |||| ||| ||||||| |||||
Sbjct: 49880 ccaagtcaataccaactttcgtattcccaccagcatgttcagc 49838



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 368   acagtacatacagcatctgctgagtattttagagc 402
             ||||||||| ||||||| || ||||||||||||||
Sbjct: 50162 acagtacatgcagcatccgcagagtattttagagc 50128
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  109 bits (55), Expect = 9e-21
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 408      actttgtaacatagagatcccatattttcatgattgaagcatccttgcaagcacctccct 467
                ||||||||||||| || ||||||||||||||||||||  ||||||||||| ||||| | |
Sbjct: 33383934 actttgtaacataaaggtcccatattttcatgattgagacatccttgcaaccaccttctt 33383875

                                                           
Query: 468      ccaagtcaatgccaactttcatattaccagcagcatgctcagc 510
                |||||||||| ||||||||| |||| ||| ||||||| |||||
Sbjct: 33383874 ccaagtcaataccaactttcgtattcccaccagcatgttcagc 33383832



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 368      acagtacatacagcatctgctgagtattttagagc 402
                ||||||||| ||||||| || ||||||||||||||
Sbjct: 33384156 acagtacatgcagcatccgcagagtattttagagc 33384122
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>gb|AY109440.1| Zea mays CL8405_1 mRNA sequence
          Length = 1151

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 145/179 (81%)
 Strand = Plus / Plus

                                                                       
Query: 332 gccggctttgccatgataatctggtcaactcgtaaaacagtacatacagcatctgctgag 391
           |||||||| ||||| || ||||||||||| || |  || || ||| | ||||| || || 
Sbjct: 423 gccggcttcgccataatgatctggtcaacccgcagcacggtgcatgcggcatcggcagaa 482

                                                                       
Query: 392 tattttagagcaaaggactttgtaacatagagatcccatattttcatgattgaagcatcc 451
           |||||||| |||||| ||||||| ||||| || ||||||||||||| | | |     |||
Sbjct: 483 tattttagggcaaagaactttgtgacataaaggtcccatattttcaaggtcgtgatgtcc 542

                                                                      
Query: 452 ttgcaagcacctccctccaagtcaatgccaactttcatattaccagcagcatgctcagc 510
           ||||| |||||| |||||| ||||||||||||||||| ||| |||  ||||||||||||
Sbjct: 543 ttgcaggcaccttcctccaggtcaatgccaactttcacattgccactagcatgctcagc 601
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>gb|AC133218.3| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0549G05, complete sequence
          Length = 147182

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                  
Query: 411   ttgtaacatagagatcccatattttcatgattgaagcatccttgcaagcacct 463
             ||||||||||||| ||||||||||||||||| ||  ||||||||||| |||||
Sbjct: 66814 ttgtaacatagaggtcccatattttcatgatcgagacatccttgcaaacacct 66762



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 371   gtacatacagcatctgctgagtattttagag 401
             |||||| |||||||||| |||||||||||||
Sbjct: 67060 gtacatgcagcatctgcagagtattttagag 67030
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                     
Query: 411      ttgtaacatagagatcccatattttcatgattgaagcatccttgcaagcacct 463
                ||||||||||||| ||||||||||||||||| ||  ||||||||||| |||||
Sbjct: 20945202 ttgtaacatagaggtcccatattttcatgatcgagacatccttgcaaacacct 20945150



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 371      gtacatacagcatctgctgagtattttagag 401
                |||||| |||||||||| |||||||||||||
Sbjct: 20945448 gtacatgcagcatctgcagagtattttagag 20945418
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                     
Query: 411      ttgtaacatagagatcccatattttcatgattgaagcatccttgcaagcacct 463
                ||||||||||||| ||||||||||||||||| ||  ||||||||||| |||||
Sbjct: 21255437 ttgtaacatagaggtcccatattttcatgatcgagacatccttgcaaacacct 21255385



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 371      gtacatacagcatctgctgagtattttagag 401
                |||||| |||||||||| |||||||||||||
Sbjct: 21255683 gtacatgcagcatctgcagagtattttagag 21255653
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>gb|BC045040.1| Xenopus laevis chaperonin containing TCP1, subunit 8 (theta), mRNA
            (cDNA clone MGC:53230 IMAGE:5543459), complete cds
          Length = 1876

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 326  ccgcccgccggctttgccatgataatctggtcaac 360
            |||||||| || ||||||||||| |||||||||||
Sbjct: 1654 ccgcccgctggttttgccatgatgatctggtcaac 1620
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>emb|CR848261.2| Xenopus tropicalis finished cDNA, clone TNeu069e02
          Length = 1870

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 338  tttgccatgataatctggtcaac 360
            |||||||||||||||||||||||
Sbjct: 1651 tttgccatgataatctggtcaac 1629
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>gb|AY251815.1| Bigelowiella natans chaperonin-containing TCP-1 theta mRNA, complete
            cds
          Length = 1977

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 322  cggcccgcccgccggctttgccatgataatctg 354
            |||||| || ||||||||||||||||| |||||
Sbjct: 1667 cggcccaccagccggctttgccatgatgatctg 1635
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>dbj|AK131417.1| Homo sapiens cDNA FLJ16527 fis, clone OCBBF2009583, weakly  similar
            to ZINC FINGER PROTEIN 184
          Length = 2415

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 459  cacctccctccaagtcaatgc 479
            |||||||||||||||||||||
Sbjct: 1975 cacctccctccaagtcaatgc 1955
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>emb|CR616392.1| full-length cDNA clone CS0DA004YP22 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1915

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 459  cacctccctccaagtcaatgc 479
            |||||||||||||||||||||
Sbjct: 1511 cacctccctccaagtcaatgc 1491
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>gb|AC009990.9| Homo sapiens chromosome 05 clone RP11-94N1, complete sequence
          Length = 159772

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 400    agcaaaggactttgtaacata 420
              |||||||||||||||||||||
Sbjct: 146037 agcaaaggactttgtaacata 146017
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>gb|AC116339.2| Homo sapiens chromosome 5 clone RP11-1006G2, complete sequence
          Length = 74705

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 400   agcaaaggactttgtaacata 420
             |||||||||||||||||||||
Sbjct: 73725 agcaaaggactttgtaacata 73745
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>gb|AC097510.3| Homo sapiens BAC clone RP11-390C19 from 4, complete sequence
          Length = 177467

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 287   taatcttcatccattgcacct 307
             |||||||||||||||||||||
Sbjct: 82368 taatcttcatccattgcacct 82388
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>gb|AC092798.3| Homo sapiens chromosome 3 clone RP11-653E17, complete sequence
          Length = 156180

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 215   ataggatgaaacagtcttctgcatg 239
             |||| ||||||||||||||||||||
Sbjct: 90272 atagcatgaaacagtcttctgcatg 90248
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>gb|AC010259.7| Homo sapiens chromosome 5 clone CTC-454M9, complete sequence
          Length = 195476

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 400    agcaaaggactttgtaacata 420
              |||||||||||||||||||||
Sbjct: 154657 agcaaaggactttgtaacata 154637
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>gb|AC022148.6| Homo sapiens chromosome 19 clone CTD-3064H18, complete sequence
          Length = 196954

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 459    cacctccctccaagtcaatgc 479
              |||||||||||||||||||||
Sbjct: 126001 cacctccctccaagtcaatgc 126021
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>ref|NM_001013659.1| Homo sapiens similar to zinc finger protein 569 (LOC390927), mRNA
          Length = 2415

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 459  cacctccctccaagtcaatgc 479
            |||||||||||||||||||||
Sbjct: 1975 cacctccctccaagtcaatgc 1955
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 474     caatgccaactttcatattac 494
               |||||||||||||||||||||
Sbjct: 1725727 caatgccaactttcatattac 1725707
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>gb|AC146033.2| Pan troglodytes BAC clone RP43-14B18 from 7, complete sequence
          Length = 170094

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   taaaacagtacatacagcat 383
             ||||||||||||||||||||
Sbjct: 75825 taaaacagtacatacagcat 75806
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>emb|Z93382.1|CEF45G2 Caenorhabditis elegans Cosmid F45G2, complete sequence
          Length = 36309

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 419  tagagatcccatattttcatgatt 442
            ||||||||||||||||| ||||||
Sbjct: 1902 tagagatcccatattttgatgatt 1925
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>gb|AC006463.4| Homo sapiens BAC clone RP11-395G17 from 7, complete sequence
          Length = 120984

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   taaaacagtacatacagcat 383
             ||||||||||||||||||||
Sbjct: 94253 taaaacagtacatacagcat 94272
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>gb|AC102663.6| Mus musculus chromosome 6, clone RP23-244M15, complete sequence
          Length = 223742

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tttggttcatataacaataa 79
             ||||||||||||||||||||
Sbjct: 97283 tttggttcatataacaataa 97302
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>ref|NM_001007874.1| Xenopus tropicalis cct8 protein (cct8), mRNA
          Length = 1967

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  ctttgccatgataatctggtcaac 360
            ||||||||| ||||||||||||||
Sbjct: 1650 ctttgccattataatctggtcaac 1627
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>gb|BC080140.1| Xenopus tropicalis cct8 protein, mRNA (cDNA clone MGC:89698
            IMAGE:7026586), complete cds
          Length = 1967

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  ctttgccatgataatctggtcaac 360
            ||||||||| ||||||||||||||
Sbjct: 1650 ctttgccattataatctggtcaac 1627
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>emb|AL590031.6| Human DNA sequence from clone RP11-285F11 on chromosome X Contains the
             5' end of the gene for a novel WD repeat domain protein,
             complete sequence
          Length = 145153

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   attttagagcaaaggacttt 412
             ||||||||||||||||||||
Sbjct: 49303 attttagagcaaaggacttt 49284
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>dbj|AK139153.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730051F21
            product:unclassifiable, full insert sequence
          Length = 3347

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   tttggttcatataacaataa 79
            ||||||||||||||||||||
Sbjct: 2897 tttggttcatataacaataa 2916
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 470      aagtcaatgccaactttcat 489
                ||||||||||||||||||||
Sbjct: 13548791 aagtcaatgccaactttcat 13548810
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>gb|AC079181.3|AC079181 Mus musculus strain C57BL/6J chromosome 12 clone RP23-197F8, complete
             sequence
          Length = 209058

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aattttacaaaaccatcttt 49
             ||||||||||||||||||||
Sbjct: 47068 aattttacaaaaccatcttt 47087
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>gb|AC135977.5| Homo sapiens chromosome 11, clone RP11-61N20, complete sequence
          Length = 152868

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    gcacagaaaaactaatcttc 294
              ||||||||||||||||||||
Sbjct: 117998 gcacagaaaaactaatcttc 118017
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>gb|AC118942.4| Homo sapiens chromosome 11, clone RP11-15P23, complete sequence
          Length = 161527

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   gcacagaaaaactaatcttc 294
             ||||||||||||||||||||
Sbjct: 29590 gcacagaaaaactaatcttc 29609
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>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0459H02
          Length = 168230

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 470   aagtcaatgccaactttcat 489
             ||||||||||||||||||||
Sbjct: 77281 aagtcaatgccaactttcat 77300
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>emb|BX004813.5| Zebrafish DNA sequence from clone CH211-55K22 in linkage group 8,
             complete sequence
          Length = 148955

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   ctttgccatgataatctggt 356
             ||||||||||||||||||||
Sbjct: 92866 ctttgccatgataatctggt 92847
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>gb|AF162715.2|AF162715 Homo sapiens Skn-1a/i-like mRNA
          Length = 3450

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 gtacatacagcatctgctga 390
           ||||||||||||||||||||
Sbjct: 595 gtacatacagcatctgctga 576
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>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region
               locus, strain C57BL/6
          Length = 2500000

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 30      aattttacaaaaccatcttt 49
               ||||||||||||||||||||
Sbjct: 1049966 aattttacaaaaccatcttt 1049985
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>dbj|AP001150.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-778O17, complete
             sequence
          Length = 157282

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   gtacatacagcatctgctga 390
             ||||||||||||||||||||
Sbjct: 71130 gtacatacagcatctgctga 71111


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,664,390
Number of Sequences: 3902068
Number of extensions: 4664390
Number of successful extensions: 86596
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86299
Number of HSP's gapped (non-prelim): 296
length of query: 515
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 492
effective length of database: 17,143,297,704
effective search space: 8434502470368
effective search space used: 8434502470368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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