Clone Information

BLAST Search Result

Clone Name	rbaal2n16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	HD2B_MAIZE (Q9M4U5) Histone deacetylase 2b (HD2b) (Zm-HD2b)	128	1e-29
2	HD2A_MAIZE (O24591) Histone deacetylase 2a (HD2a) (Zm-HD2a) (Nuc...	110	2e-24
3	HD2C_MAIZE (Q9M4U4) Histone deacetylase 2c (HD2c) (Zm-HD2c)	104	2e-22
4	HD2A_SOLCH (Q6V9I6) Histone deacetylase 2a (HD2a) (ScHD2a)	91	3e-18
5	HD2C_ARATH (Q9LZR5) Histone deacetylase 2c (HD-tuins protein 3)	86	6e-17
6	HD2A_SOYBN (Q8LJS2) Histone deacetylase 2a (HD2a) (Nucleolar his...	85	1e-16
7	HD2B_ARATH (Q56WH4) Histone deacetylase 2b (HD-tuins protein 2)	72	8e-13
8	HD2A_ARATH (Q9FVE6) Histone deacetylase 2a (HD-tuins protein 1)	59	7e-09
9	TAU_PONPY (Q5S6V2) Microtubule-associated protein tau	40	0.005
10	H1B_STRPU (P15869) Histone H1-beta, late embryonic	39	0.008
11	TAU_PAPHA (Q9MYX8) Microtubule-associated protein tau (Neurofibr...	39	0.008
12	TAU_HUMAN (P10636) Microtubule-associated protein tau (Neurofibr...	39	0.014
13	H1_TIGCA (P35060) Histone H1	38	0.023
14	TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibril...	37	0.030
15	H11_VOLCA (Q08864) Histone H1-I	36	0.088
16	TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibr...	35	0.11
17	UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Unco...	35	0.11
18	TOP1_ZYMMO (Q9X3X7) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	33	0.57
19	ADA19_MOUSE (O35674) ADAM 19 precursor (EC 3.4.24.-) (A disinteg...	33	0.74
20	H12_GLYBA (P40264) Histone H1-II	32	0.97
21	H1_EMENI (Q9P8F8) Histone H1	32	0.97
22	TAU_PANTR (Q5YCW1) Microtubule-associated protein tau	32	1.3
23	TAU_GORGO (Q5YCW0) Microtubule-associated protein tau	32	1.3
24	MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) ...	32	1.3
25	RL14_RAT (Q63507) 60S ribosomal protein L14	32	1.3
26	NUCL_MACFA (Q4R4J7) Nucleolin	32	1.7
27	NUCL_HUMAN (P19338) Nucleolin (Protein C23)	32	1.7
28	NUCL_PONPY (Q5RF26) Nucleolin	32	1.7
29	IF2_THEFY (Q47RV1) Translation initiation factor IF-2	32	1.7
30	H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)	32	1.7
31	TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibr...	31	2.2
32	Y287_MYCLE (O69601) Hypothetical protein ML0287	31	2.2
33	H12_VOLCA (Q08865) Histone H1-II	31	2.8
34	RL14_MOUSE (Q9CR57) 60S ribosomal protein L14	31	2.8
35	PSIP1_MOUSE (Q99JF8) PC4 and SFRS1-interacting protein (Lens epi...	31	2.8
36	EXBB1_VIBCH (O52043) Biopolymer transport exbB1 protein	31	2.8
37	H2AY_RAT (Q02874) Core histone macro-H2A.1 (Histone macroH2A1) (...	31	2.8
38	ZFP37_RAT (O88553) Zinc finger protein 37 (Zfp-37)	31	2.8
39	RL14_HUMAN (P50914) 60S ribosomal protein L14 (CAG-ISL 7)	30	3.7
40	BTNL9_HUMAN (Q6UXG8) Butyrophilin-like protein 9 precursor	30	3.7
41	H11_CAEEL (P10771) Histone H1.1	30	3.7
42	PSIP1_RAT (Q812D1) PC4 and SFRS1-interacting protein (Lens epith...	30	3.7
43	H1B_XENLA (P06893) Histone H1B	30	3.7
44	H13_RABIT (P02251) Histone H1.3	30	3.7
45	I20L2_HUMAN (Q9H9L3) Interferon-stimulated 20 kDa exonuclease-li...	30	4.8
46	TAU_HYLLA (Q5YCV9) Microtubule-associated protein tau	30	4.8
47	HD_MOUSE (P42859) Huntingtin (Huntington disease protein homolog...	30	4.8
48	I23O_HUMAN (P14902) Indoleamine 2,3-dioxygenase (EC 1.13.11.42) ...	30	4.8
49	H1_ONCMY (P06350) Histone H1 [Contains: Oncorhyncin II]	30	4.8
50	PSIP1_FELCA (Q66T72) PC4 and SFRS1-interacting protein (Lens epi...	30	6.3
51	OPGH_XANCV (Q83Z42) Glucans biosynthesis glucosyltransferase H (...	30	6.3
52	H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm...	30	6.3
53	BCL6_HUMAN (P41182) B-cell lymphoma 6 protein (BCL-6) (Zinc fing...	30	6.3
54	OPGH_XANAC (Q8PPR7) Glucans biosynthesis glucosyltransferase H (...	30	6.3
55	FR1OP_RAT (Q4V7C1) FGFR1 oncogene partner	29	8.2
56	PSIP1_BOVIN (Q8MJG1) PC4 and SFRS1-interacting protein (Lens epi...	29	8.2
57	MARCS_CHICK (P16527) Myristoylated alanine-rich C-kinase substra...	29	8.2
58	POLG_HCVJK (Q68801) Genome polyprotein [Contains: Core protein p...	29	8.2
59	CBX2_HUMAN (Q14781) Chromobox protein homolog 2	29	8.2

>HD2B_MAIZE (Q9M4U5) Histone deacetylase 2b (HD2b) (Zm-HD2b)|
          Length = 303

 Score =  128 bits (322), Expect = 1e-29
 Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 4/90 (4%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPAT 352
           TPKK E GKKR A + +KTP++DKKAK+ATP  QKTG KKGA HVATPHPAK  GKTPA 
Sbjct: 205 TPKKPEAGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPAN 262

Query: 351 SD----KSPKSGGSVACKSCTKTFNSEVAL 274
           +D    KSPKSGGSV CKSC+KTFNSE+AL
Sbjct: 263 NDKLTEKSPKSGGSVPCKSCSKTFNSEMAL 292

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>HD2A_MAIZE (O24591) Histone deacetylase 2a (HD2a) (Zm-HD2a) (Nucleolar histone|
           deacetylase HD2-p39)
          Length = 307

 Score =  110 bits (276), Expect = 2e-24
 Identities = 63/95 (66%), Positives = 70/95 (73%), Gaps = 9/95 (9%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDI-KTPVADKKAKIATPSGQKTGDKKG-AVHVATPHPAKKVGKTP 358
           TPKK E GKKR A S + KTP++DKKAK+ATPS QKTG KKG AVHVATPHPAK  GKT 
Sbjct: 199 TPKKPEVGKKRPAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTI 256

Query: 357 ATSDKS-------PKSGGSVACKSCTKTFNSEVAL 274
             +DKS       PKSGGSV CK C+K+F SE AL
Sbjct: 257 VNNDKSVKSPKSAPKSGGSVPCKPCSKSFISETAL 291

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>HD2C_MAIZE (Q9M4U4) Histone deacetylase 2c (HD2c) (Zm-HD2c)|
          Length = 300

 Score =  104 bits (259), Expect = 2e-22
 Identities = 62/94 (65%), Positives = 69/94 (73%), Gaps = 9/94 (9%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDI-KTPVADKKAKIATPSGQKTGDKKG-AVHVATPHPAKKVGKTP 358
           TPKK E GKKRAA S + KTP++DKKAK+ATPS QKTG KKG AVHVATPHPAK  GKT 
Sbjct: 199 TPKKPEVGKKRAAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTI 256

Query: 357 ATSDKS-------PKSGGSVACKSCTKTFNSEVA 277
             +DKS       PKSG  V CKSC+K+F SE A
Sbjct: 257 VNNDKSVKSPKSAPKSG--VPCKSCSKSFISETA 288

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>HD2A_SOLCH (Q6V9I6) Histone deacetylase 2a (HD2a) (ScHD2a)|
          Length = 269

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 50/88 (56%), Positives = 56/88 (63%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPAT 352
           TPKK E  K+R A S  KTPV DKKAK+ TP  QKT  KKG  HVATPHP+K+  KT   
Sbjct: 181 TPKKAEPAKRRKADSATKTPVTDKKAKLTTP--QKTDGKKGGGHVATPHPSKQASKT--- 235

Query: 351 SDKSPKSGGSVACKSCTKTFNSEVALAS 268
               PKS GS  CK C ++F SE AL S
Sbjct: 236 ----PKSAGSHHCKPCNRSFGSEGALDS 259

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>HD2C_ARATH (Q9LZR5) Histone deacetylase 2c (HD-tuins protein 3)|
          Length = 294

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 51/97 (52%), Positives = 62/97 (63%), Gaps = 9/97 (9%)
 Frame = -3

Query: 531 TPKKQETGKKRAAG-SDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGK--- 364
           TPKK E  KKR+A  +  K P ++KKAK  TP  QKT  KK  VHVATPHP+K+ GK   
Sbjct: 190 TPKKPEEPKKRSAEPNSSKNPASNKKAKFVTP--QKTDSKKPHVHVATPHPSKQAGKNSG 247

Query: 363 ---TPATS--DKSPKSGGSVACKSCTKTFNSEVALAS 268
              T  TS   ++PKS G+  CKSCT+TF SE+ L S
Sbjct: 248 GGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQS 284

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>HD2A_SOYBN (Q8LJS2) Histone deacetylase 2a (HD2a) (Nucleolar histone|
           deacetylase HD2-p39)
          Length = 295

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = -3

Query: 525 KKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTP-ATS 349
           KK + GKKR   S  KTP++ KKAK ATP  +KT  KK +VHVATPHP+KK GKTP +T 
Sbjct: 203 KKVDQGKKRPNESAAKTPISAKKAKTATP--EKTDGKK-SVHVATPHPSKKGGKTPNSTK 259

Query: 348 DKSPKSGGSVACKSCTKTFNSEVAL 274
            ++P S G ++C SC K+F +E  L
Sbjct: 260 GQTPNSAGQLSCASCKKSFTNEAGL 284

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>HD2B_ARATH (Q56WH4) Histone deacetylase 2b (HD-tuins protein 2)|
          Length = 306

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 47/87 (54%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
 Frame = -3

Query: 531 TPKKQET-GKKRAAGSDIKTPVADKKAK-IATPSG--QKTGDKKGAVHVATPHPAKKVGK 364
           TPKK E   KKR   S  KTPV+ KKAK  A P+   QKT +KK   H ATPHPAKK GK
Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGK 258

Query: 363 TPATSDKSPKSGG-SVACKSCTKTFNS 286
           +P  +++SPKSGG S    +  K FNS
Sbjct: 259 SPVNANQSPKSGGQSSGGNNNKKPFNS 285

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>HD2A_ARATH (Q9FVE6) Histone deacetylase 2a (HD-tuins protein 1)|
          Length = 245

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 40/88 (45%), Positives = 50/88 (56%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPAT 352
           TPKK  + KKRA  +  K PV+ KKAK+A  + QKT +KK            K GK    
Sbjct: 164 TPKKPASSKKRANETTPKAPVSAKKAKVAV-TPQKTDEKK------------KGGKA--- 207

Query: 351 SDKSPKSGGSVACKSCTKTFNSEVALAS 268
           +++SPKS   V+C SC KTFNS  AL S
Sbjct: 208 ANQSPKSASQVSCGSCKKTFNSGNALES 235

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>TAU_PONPY (Q5S6V2) Microtubule-associated protein tau|
          Length = 757

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAK--KVGKTP 358
           TP+   +G K     ++K   AD K KIATP G     +KG  + AT  PAK     KTP
Sbjct: 445 TPRTGSSGAK-----EMKLKGADGKTKIATPRGAAPPGQKGQAN-ATRIPAKTPPAPKTP 498

Query: 357 ATSDKSPKSG 328
            +S + PKSG
Sbjct: 499 PSSGEPPKSG 508

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>H1B_STRPU (P15869) Histone H1-beta, late embryonic|
          Length = 211

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 28/76 (36%), Positives = 32/76 (42%)
 Frame = -3

Query: 525 KKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSD 346
           KK     K+ A    K P A K AK   P+ +K   KK A   A P PAKK  K PA   
Sbjct: 140 KKTTKKVKKPAAKKAKKPAAKKAAK--KPAAKKPAAKKAA---AKPAPAKKAAKKPAAKK 194

Query: 345 KSPKSGGSVACKSCTK 298
            + K     A K   K
Sbjct: 195 AAKKVAKKPAAKKAAK 210

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>TAU_PAPHA (Q9MYX8) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 382

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 30/71 (42%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPV-ADKKAKIATPSGQKTGDKKGAVHVATPHPAK--KVGKT 361
           T  +  +  K   GSD K    AD K KIATP G     +KG  + AT  PAK     KT
Sbjct: 64  TQARMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPGQKGQAN-ATRIPAKTPPAPKT 122

Query: 360 PATSDKSPKSG 328
           P +S + PKSG
Sbjct: 123 PPSSGEPPKSG 133

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>TAU_HUMAN (P10636) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 757

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGS---DIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAK--KVG 367
           +PK   +   R   S   ++K   AD K KIATP G     +KG  + AT  PAK     
Sbjct: 437 SPKHVSSVTSRTGSSGAKEMKLKGADGKTKIATPRGAAPPGQKGQAN-ATRIPAKTPPAP 495

Query: 366 KTPATSDKSPKSG 328
           KTP +S + PKSG
Sbjct: 496 KTPPSSGEPPKSG 508

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>H1_TIGCA (P35060) Histone H1|
          Length = 181

 Score = 37.7 bits (86), Expect = 0.023
 Identities = 30/77 (38%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
 Frame = -3

Query: 528 PKKQETGKKRAAGSDIKTPVADKKAK------------IATPSGQKTGDKKGAVHVATPH 385
           PKK +T KK+AA +  K P  +KKAK             A P   KT  KK A   A   
Sbjct: 107 PKKAKTPKKKAAAT--KKPTGEKKAKTPKKKPAAKKPAAAKPKKAKTPKKKAA--PAKKT 162

Query: 384 PAKKVGKTPATSDKSPK 334
           P KKV KT      +PK
Sbjct: 163 PVKKVKKTSPKKKAAPK 179

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>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 751

 Score = 37.4 bits (85), Expect = 0.030
 Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = -3

Query: 531 TPKKQETGKK--RAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKV--GK 364
           TP+    G K  +  G+D KT      AKIATP G  T  +KG  + AT  PAK     K
Sbjct: 437 TPRNGSPGTKQMKLKGADGKTG-----AKIATPRGAATPGQKGTSN-ATRIPAKTTPSPK 490

Query: 363 TPATSDKSPKSG 328
           TP  S + PKSG
Sbjct: 491 TPPGSGEPPKSG 502



 Score = 30.4 bits (67), Expect = 3.7
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -3

Query: 519 QETGKKRAAGSDIK--TPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSD 346
           + T K+ AAG   +  + V   KA++A  S  +TG+ +     +TP  AK     P  S 
Sbjct: 344 EPTDKQPAAGLPGRPVSRVPQLKARVAGVSKDRTGNDEKKAKTSTPSCAKTPSNRPCLSP 403

Query: 345 KSPKSGGS 322
             P  G S
Sbjct: 404 TRPTPGSS 411

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>H11_VOLCA (Q08864) Histone H1-I|
          Length = 260

 Score = 35.8 bits (81), Expect = 0.088
 Identities = 27/64 (42%), Positives = 33/64 (51%)
 Frame = -3

Query: 525 KKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSD 346
           KK++  KK+A      TP A+K  K ATP  +  G KK     ATP P K   K+PA  D
Sbjct: 180 KKEKVEKKKA------TPKAEKPKKAATP--KSAGKKK-----ATPKP-KAAPKSPAKKD 225

Query: 345 KSPK 334
             PK
Sbjct: 226 AKPK 229

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>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 732

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 30/72 (41%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = -3

Query: 531 TPKKQETGKK--RAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKV--GK 364
           TP+    G K  +  G+D KT      AKIATP G  +  +KG  + AT  PAK     K
Sbjct: 418 TPRNGSPGTKQMKLKGADGKTG-----AKIATPRGAASPAQKGTSN-ATRIPAKTTPSPK 471

Query: 363 TPATSDKSPKSG 328
           TP  S + PKSG
Sbjct: 472 TPPGSGEPPKSG 483

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>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
 Frame = -3

Query: 531  TPKKQETGKKRAAGSDIKTPVADKKA------KIATPSGQKTGDKKGAVHVA------TP 388
            +P K+E+   +    ++K+P   +K+      K A+P+ ++   +K  V         +P
Sbjct: 1668 SPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSP 1727

Query: 387  HPAKKVGKTPATSDKSPKSGGSVACKSCTK 298
              A++  K+P   +KSP+   +   KS TK
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTK 1757



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -3

Query: 531  TPKKQETGKKRAAGSDIKTPV------ADKKAKIATPSGQKTGDKKGAVHVATPHPAKKV 370
            +P K+E   +++   ++K+P       A++K K  T   +K+ +K  A  V         
Sbjct: 1703 SPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKK-EKSPEKSAAEEV--------- 1752

Query: 369  GKTPATSDKSPKSGGSVACKSCTKTFNSEVALA 271
             K+P   +KSP+       KS TK  +S V +A
Sbjct: 1753 -KSPTKKEKSPEKSAEEKPKSPTKKESSPVKMA 1784

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>TOP1_ZYMMO (Q9X3X7) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
            (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
            (Swivelase)
          Length = 1217

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 36/101 (35%), Positives = 43/101 (42%), Gaps = 17/101 (16%)
 Frame = -3

Query: 528  PKKQET----GKKRAAGSDIKTPVADKKA--KIATPSGQKTGDKKGAVHVATP--HPAKK 373
            PKK++T     KK AA        A KKA  K ATP    T +       ATP   PAKK
Sbjct: 1116 PKKKKTKKAAAKKPAAKKTTTKKAAPKKATTKTATPKSATTDNATSEDGDATPAKSPAKK 1175

Query: 372  V------GKTPATSD---KSPKSGGSVACKSCTKTFNSEVA 277
                    K PA+     K+P S  + A K+   T   EVA
Sbjct: 1176 AVAKKTTAKKPASKSATKKAPSSKTTAAKKTSKATPKDEVA 1216

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>ADA19_MOUSE (O35674) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 19) (Meltrin beta)
          Length = 920

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 351 WLLGSCLPSWPGAGSQHGQPPSCHLFSGLMVLQFWPSCQQQGS*YH 488
           W L +C P W   GSQ G PP  H     +++  W + +  G   H
Sbjct: 21  WPLAACEPGWTTRGSQEGSPPLQH----ELIIPQWRTSESPGRGKH 62

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>H12_GLYBA (P40264) Histone H1-II|
          Length = 232

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 22/66 (33%), Positives = 30/66 (45%)
 Frame = -3

Query: 507 KKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSDKSPKSG 328
           K + A    K P A KK K+A    + TG+KK     A P   KK G+   +  K PK+ 
Sbjct: 102 KGKGASGSFKLPAAAKKEKVAKKPMKATGEKKPKA-AAKP---KKAGEKKKSIAKKPKAA 157

Query: 327 GSVACK 310
            +   K
Sbjct: 158 TATKVK 163

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>H1_EMENI (Q9P8F8) Histone H1|
          Length = 200

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 26/66 (39%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
 Frame = -3

Query: 528 PKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKT--GDKK--GAVHVATPHPAKKVGKT 361
           PKK  T  K AA     T  ADK  K   P  +KT  G KK  G     T  P K     
Sbjct: 102 PKKPATTTKTAAPKKTATKKADKAEKAEKPKTKKTNAGVKKPAGRPKANTAKPRKASTAA 161

Query: 360 PATSDK 343
           PA  DK
Sbjct: 162 PAVVDK 167

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>TAU_PANTR (Q5YCW1) Microtubule-associated protein tau|
          Length = 775

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAK--KVGKTP 358
           TP+   +G K     ++K   AD K KIATP G     +KG  + AT  PAK     KTP
Sbjct: 445 TPRTGSSGAK-----EMKLKGADGKTKIATPRGAAPPGQKGQAN-ATRIPAKTPPAPKTP 498

Query: 357 ATS 349
            +S
Sbjct: 499 PSS 501

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>TAU_GORGO (Q5YCW0) Microtubule-associated protein tau|
          Length = 775

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAK--KVGKTP 358
           TP+   +G K     ++K   AD K KIATP G     +KG  + AT  PAK     KTP
Sbjct: 445 TPRTGSSGAK-----EMKLKGADGKTKIATPRGAAPPGQKGQAN-ATRIPAKTPPAPKTP 498

Query: 357 ATS 349
            +S
Sbjct: 499 PSS 501

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>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1|
           light chain LC1]
          Length = 2468

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPAT 352
           +P K E  +K+A  +D+K P A K+  +   +  K  DKK          AKK  KTP  
Sbjct: 614 SPVKAEVAEKQA--TDVK-PKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIK 670

Query: 351 SDKSPK 334
            ++ PK
Sbjct: 671 KEEKPK 676

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>RL14_RAT (Q63507) 60S ribosomal protein L14|
          Length = 213

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
 Frame = -3

Query: 531 TPKKQETGKKR---AAGSDIKTPVADKKAKIATPSGQKTGDKKGAVH------VATPHPA 379
           +PKK    K     AA +  K P     AK AT  GQK   +K +         A P   
Sbjct: 138 SPKKAAVAKAAIAAAAAAKAKVP-----AKKATGPGQKAAAQKASAQKAAGQKAAPPAKG 192

Query: 378 KKVGKTPATSDKSPKSGGSVA 316
           +K  KTPA    +PK+ G  A
Sbjct: 193 QKGQKTPAQKAPAPKAAGKKA 213

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>NUCL_MACFA (Q4R4J7) Nucleolin|
          Length = 710

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -3

Query: 519 QETGKKRAAGSDIKTPVA-DKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSDK 343
           Q+ GKK AA S  K  V+  KK  +ATP+ +K     G    AT  PAKK   TPA +  
Sbjct: 49  QKKGKKAAATSAKKVVVSPTKKVAVATPA-KKAAVTPGKKAAAT--PAKKT-VTPAKAVA 104

Query: 342 SPKSGGSVACKSCTKT 295
           +P   G+   K+   T
Sbjct: 105 TPGKKGATPGKALVAT 120

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>NUCL_HUMAN (P19338) Nucleolin (Protein C23)|
          Length = 709

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -3

Query: 519 QETGKKRAAGSDIKTPVA-DKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSDK 343
           Q+ GKK AA S  K  V+  KK  +ATP+ +K     G    AT  PAKK   TPA +  
Sbjct: 49  QKKGKKAAATSAKKVVVSPTKKVAVATPA-KKAAVTPGKKAAAT--PAKKT-VTPAKAVT 104

Query: 342 SPKSGGSVACKSCTKT 295
           +P   G+   K+   T
Sbjct: 105 TPGKKGATPGKALVAT 120

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>NUCL_PONPY (Q5RF26) Nucleolin|
          Length = 711

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -3

Query: 519 QETGKKRAAGSDIKTPVA-DKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSDK 343
           Q+ GKK AA S  K  V+  KK  +ATP+ +K     G    AT  PAKK   TPA +  
Sbjct: 49  QKKGKKAAATSAKKVVVSPTKKVAVATPA-KKAAVTPGKKAAAT--PAKKT-VTPAKAVT 104

Query: 342 SPKSGGSVACKSCTKT 295
           +P   G+   K+   T
Sbjct: 105 TPGKKGATPGKALVAT 120

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>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -3

Query: 525 KKQETGK-KRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATS 349
           K QE G+  R+A S ++ PV  +  +  + S + T   KG      P P  +      T 
Sbjct: 23  KLQEMGEFVRSASSTVEAPVVRRLKEAFSQSSESTEGAKGGQEKKKPSPKPQPSPQQQTK 82

Query: 348 DKSPKSGG 325
             +P +GG
Sbjct: 83  ASAPSAGG 90

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>H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)|
          Length = 252

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
 Frame = -3

Query: 525 KKQETGKKRAAGSDIK-TPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATS 349
           KK  TG+K+A  +  K     +KKA         TG+KK    VA    A    K     
Sbjct: 139 KKDATGEKKATTTVAKKAATGEKKATTTVAKKAATGEKKATTTVAKKAAAGDKAKKTEVK 198

Query: 348 DKSPKSGGSVACKSCTKTFNSEV 280
            K  KS   +A     K   S V
Sbjct: 199 VKKVKSPKKIAKSPVNKVTKSPV 221



 Score = 29.6 bits (65), Expect = 6.3
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
 Frame = -3

Query: 525 KKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGD----KKGAVHVATPHPAKKVGKTP 358
           KK  TG+K+A  +  K   A  KAK      +K        K  V+  T  P KK+ K+ 
Sbjct: 169 KKAATGEKKATTTVAKKAAAGDKAKKTEVKVKKVKSPKKIAKSPVNKVTKSPVKKIAKSS 228

Query: 357 ATSDKSPKSGGSVACKS 307
           +      K+    A K+
Sbjct: 229 SMKAAPKKAAAKPAKKA 245

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>TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 458

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPV-ADKKAKIATPSGQKTGDKKGAVHVATPHPAK--KVGKT 361
           T  +  +  K   GSD K    AD K KIATP G     +KG  + AT  PAK     KT
Sbjct: 122 TQARMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPGQKGQAN-ATRIPAKTPPAPKT 180

Query: 360 PATS 349
           P +S
Sbjct: 181 PPSS 184

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>Y287_MYCLE (O69601) Hypothetical protein ML0287|
          Length = 222

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 410 PFLSPVFW--PDGVAILAFLSATGVLISLPAALFFPV 514
           P L P+FW  P+G    A L AT V+I +   L FP+
Sbjct: 10  PTLDPMFWIGPEGFFAAAMLPATLVIIFVETGLLFPL 46

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>H12_VOLCA (Q08865) Histone H1-II|
          Length = 240

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 22/50 (44%), Positives = 23/50 (46%)
 Frame = -3

Query: 522 KQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKK 373
           K+ T KK AA    K   A KKAK ATP   K    K A   A P  A K
Sbjct: 179 KKATPKKAAAP---KKAAAPKKAKAATPKKAKAATPKKAKAAAKPKAAAK 225



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
 Frame = -3

Query: 528 PKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDK----KGAVHVATPHPAKK---- 373
           PKK    KK AA    K P  + + K   P  +K   K    K       P  AKK    
Sbjct: 110 PKKAAAPKKAAAPKKAKAPKKEGEKKAVKPKSEKKAAKPKTEKKPKAAKKPKAAKKPAAK 169

Query: 372 --VGKTPATSDKSPKSGGS 322
               K PA    +PK   +
Sbjct: 170 KPAAKKPAAKKATPKKAAA 188

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>RL14_MOUSE (Q9CR57) 60S ribosomal protein L14|
          Length = 216

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
 Frame = -3

Query: 531 TPKKQETGKKR------AAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAK-- 376
           +PKK    K        AA +  K P           +GQK   +K A   A P PAK  
Sbjct: 138 SPKKAAVAKAAIAAAAAAAAAKAKVPAKKATGPGKKAAGQKAPAQKAAGQKAAP-PAKGQ 196

Query: 375 KVGKTPATSDKSPKSGGSVA 316
           K  KTPA    +PK+ G  A
Sbjct: 197 KGQKTPAQKAPAPKAAGKKA 216

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>PSIP1_MOUSE (Q99JF8) PC4 and SFRS1-interacting protein (Lens epithelium-derived|
           growth factor)
          Length = 528

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKG-----AVHVATPHPAKKVG 367
           TPK    G+KR A   + T  A      AT S  K   K+G      V +  P    KV 
Sbjct: 141 TPKAARRGRKRKAEKQVDTEEAG-MVTAATASNVKASPKRGRPAATEVKIPKPRGRPKVV 199

Query: 366 KTPATSD 346
           K P  SD
Sbjct: 200 KQPCPSD 206

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>EXBB1_VIBCH (O52043) Biopolymer transport exbB1 protein|
          Length = 228

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 20/56 (35%), Positives = 31/56 (55%)
 Frame = +2

Query: 329 PDLGDLSLVAGVLPTFLAGCGVATWTAPFLSPVFWPDGVAILAFLSATGVLISLPA 496
           P LG L  V G++  F    GVA  T   ++P    DG+ +  + +A G+LI++PA
Sbjct: 124 PLLGLLGTVLGLIEMFK---GVAATTGS-ITPNVLADGLGVAMYTTAAGLLIAVPA 175

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>H2AY_RAT (Q02874) Core histone macro-H2A.1 (Histone macroH2A1) (mH2A1)|
           (H2A.y) (H2A/y)
          Length = 370

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = -3

Query: 525 KKQETGKKRAAGSDIKTPVADKKAKIAT---PSGQKTGDKKGAVHVATPHPAKKVGKTPA 355
           K+   GK  A    I TP   KKAK  +   P  +KTG KKGA          K     +
Sbjct: 116 KRGSKGKLEA----IITPPPAKKAKSPSQKKPVAKKTGGKKGARKSKKQGEVSKAASADS 171

Query: 354 TSDKSPKSGGSV 319
           T++ +P  G +V
Sbjct: 172 TTEGAPTDGFTV 183

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>ZFP37_RAT (O88553) Zinc finger protein 37 (Zfp-37)|
          Length = 601

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 20/84 (23%), Positives = 33/84 (39%)
 Frame = -3

Query: 525 KKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSD 346
           K  ++   +  G   K     K  K+   +   T + K    + T    K   ++P+ SD
Sbjct: 193 KCDKSPNNKLFGKGDKNQTGKKCEKVCRHTASHTKEDK----IHTGEKRKSPCRSPSKSD 248

Query: 345 KSPKSGGSVACKSCTKTFNSEVAL 274
           K+P SG    C  C K  + +  L
Sbjct: 249 KAPGSGKPYECNQCGKVLSHKQGL 272

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>RL14_HUMAN (P50914) 60S ribosomal protein L14 (CAG-ISL 7)|
          Length = 212

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSG--QKTGDKKGAVHVATPHP-AKKVGKT 361
           +PKK    K  AA +     V  KK   A+     QK   +K     A P P A+K  K 
Sbjct: 138 SPKKAPGTKGTAAAAAAAAKVPAKKITAASKKAPAQKVPAQKATGQKAAPAPKAQKGQKA 197

Query: 360 PATSDKSPKSGGSVA 316
           PA    +PK+ G  A
Sbjct: 198 PAQKAPAPKASGKKA 212

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>BTNL9_HUMAN (Q6UXG8) Butyrophilin-like protein 9 precursor|
          Length = 535

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 348 RWLLGSCLPSWPGAGSQHGQPPSCHLFSGLMVLQFWPSCQ 467
           RW LG+CL + P AG     P      +G  VL  W  C+
Sbjct: 395 RWFLGACLAAVPRAGPARLSPA-----AGYWVLGLWNGCE 429

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>H11_CAEEL (P10771) Histone H1.1|
          Length = 207

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 25/78 (32%), Positives = 29/78 (37%)
 Frame = -3

Query: 528 PKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATS 349
           P+K    KK AA    K P A KK   A  +   TG+KK     A        G      
Sbjct: 111 PEKAAAAKKPAAA---KKPAAAKKPAAAKKA---TGEKKAKKPAAAKPKKAATGDKKVKK 164

Query: 348 DKSPKSGGSVACKSCTKT 295
            KSPK     A K   K+
Sbjct: 165 AKSPKKVAKPAAKKVAKS 182

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>PSIP1_RAT (Q812D1) PC4 and SFRS1-interacting protein (Lens epithelium-derived|
           growth factor)
          Length = 528

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 13/81 (16%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKG-----AVHVATPHPAKKVG 367
           TPK    G+KR A   + T  A      AT S  K   K+G      V +  P    KV 
Sbjct: 141 TPKAARRGRKRKAEKQVDTEEAG-VVTAATASNVKASPKRGRPAATEVKIPKPRGRPKVV 199

Query: 366 KTPATS--------DKSPKSG 328
           K P  S        DKS K G
Sbjct: 200 KQPCPSESDMVIDEDKSKKKG 220

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>H1B_XENLA (P06893) Histone H1B|
          Length = 219

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
 Frame = -3

Query: 525 KKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHP-----AKKVGKT 361
           KK   G K+A     K+P   KK   A  S +K   KK A    +P       AKKV K+
Sbjct: 132 KKTAAGAKKAP----KSPKKPKKVSAAAKSPKKV--KKLAKAAKSPKKPKAVKAKKVAKS 185

Query: 360 PATSDKSPKSGGSVA 316
           PA     PK+  S A
Sbjct: 186 PAKKATKPKTAKSPA 200

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>H13_RABIT (P02251) Histone H1.3|
          Length = 213

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = -3

Query: 528 PKKQETGK-KRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPAT 352
           PKK    K K+ AG+   TP   KKA  A  + +KT  KK     A   P     K+PA 
Sbjct: 121 PKKAGAAKPKKPAGA---TPKKPKKAAGAKKAVKKT-PKKAPKPKAAAKPKVAKPKSPAK 176

Query: 351 SDKSPKSGGSVACKS 307
             KSPK   +V  K+
Sbjct: 177 VAKSPKKAKAVKPKA 191

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>I20L2_HUMAN (Q9H9L3) Interferon-stimulated 20 kDa exonuclease-like 2 (EC|
           3.1.-.-)
          Length = 353

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 480 KTPVADKKAKIATPSGQ-KTGDKKGAVHVATPHPAKKVGKTPATSD 346
           KTP   KK   A+ +G  +  DKK AV   TP P+KK     A  D
Sbjct: 72  KTPSFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSKKADSVAAKVD 117

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>TAU_HYLLA (Q5YCV9) Microtubule-associated protein tau|
          Length = 775

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -3

Query: 498 AAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAK--KVGKTPATS 349
           +   ++K   AD K KIATP G     +KG  + AT  PAK     KTP +S
Sbjct: 451 SGAKEMKLKGADGKTKIATPRGAAPPGQKGQAN-ATRIPAKTPPAPKTPPSS 501

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>HD_MOUSE (P42859) Huntingtin (Huntington disease protein homolog) (HD protein)|
          Length = 3119

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 444  TPSGQKTGDKKGAVHVATPHPAKKVGKTPATSDKSPKSGGSVACKS 307
            +P  +K  +K+     +TP   KKVG+  A S +S  SG   A KS
Sbjct: 1159 SPIRRKGKEKEPGEQASTPMSPKKVGEASAASRQSDTSGPVTASKS 1204

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>I23O_HUMAN (P14902) Indoleamine 2,3-dioxygenase (EC 1.13.11.42) (IDO)|
           (Indoleamine-pyrrole 2,3-dioxygenase)
          Length = 403

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 310 LAGHRPSRLGRLVAGCWGLAYLLGRVRG 393
           L  H+  RL RLV GC  +AY+ G+  G
Sbjct: 70  LTDHKSQRLARLVLGCITMAYVWGKGHG 97

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>H1_ONCMY (P06350) Histone H1 [Contains: Oncorhyncin II]|
          Length = 206

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/66 (34%), Positives = 30/66 (45%)
 Frame = -3

Query: 528 PKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATS 349
           PK ++   K+ A +     VA KKA  A  S +K   KK A         KKV K  A +
Sbjct: 115 PKAKKVAAKKPAAAKKPKKVAAKKAVAAKKSPKKA--KKPATPKKAAKSPKKVKKPAAAA 172

Query: 348 DKSPKS 331
            K+ KS
Sbjct: 173 KKAAKS 178

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>PSIP1_FELCA (Q66T72) PC4 and SFRS1-interacting protein (Lens epithelium-derived|
           growth factor) (Transcription coactivator p75)
           (LEDGF/p75)
          Length = 530

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 13/81 (16%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKG-----AVHVATPHPAKKVG 367
           TPK    G+KR A   ++T  A      A     K   K+G      V +  P    K+ 
Sbjct: 141 TPKAARRGRKRKAEKQVETEEAGVVTTAAASVNLKVSPKRGRPAATEVKIPKPRGRPKMV 200

Query: 366 KTPATS--------DKSPKSG 328
           K P  S        DKS K G
Sbjct: 201 KQPCPSESDMVTEEDKSKKKG 221

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>OPGH_XANCV (Q83Z42) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)|
          Length = 643

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = +2

Query: 314 QATDPPDLG--DLSLVAGVLPTFLAGCGVATWTAPFLSPVFWPDGVAILAFLSATGVLIS 487
           Q T PP +G     L+ G   T      +A W    +  V WPDG+++L      G L+ 
Sbjct: 50  QRTSPPGIGVRRFYLIGGTFAT----TAIAVWV---MLSVLWPDGISVL-----EGCLLG 97

Query: 488 LPAALF 505
           L   LF
Sbjct: 98  LFVLLF 103

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>H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific|
           linker histone H1-like protein) [Contains:
           Sperm-specific protein PHI-3 (Protamine-like protein
           PHI-3) (PL-IV)]
          Length = 202

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
 Frame = -3

Query: 522 KQETGKKRAAGSDI--KTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKK--VGKTPA 355
           K   G   A GS    K P + KKAK A    +K+   K     A   P KK  V K+  
Sbjct: 103 KTSAGASGATGSFRVGKAPASPKKAKKAKSPKKKSSKNKSNNAKAKKSPRKKAAVKKSTK 162

Query: 354 TSDKSPKSGGSVACKSCTK 298
           +  K PKS    A K   +
Sbjct: 163 SKAKKPKSPKKKAAKKTAR 181

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>BCL6_HUMAN (P41182) B-cell lymphoma 6 protein (BCL-6) (Zinc finger protein 51)|
           (LAZ-3 protein) (BCL-5) (Zinc finger and BTB
           domain-containing protein 27)
          Length = 706

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 19/80 (23%), Positives = 35/80 (43%)
 Frame = -3

Query: 513 TGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSDKSPK 334
           TG  R++ S+  +P+     K  +   Q     +  +H A P   +++G+T +    S  
Sbjct: 455 TGSPRSS-SESHSPLYMHPPKCTSCGSQSPQHAEMCLHTAGPTFPEEMGETQSEYSDSSC 513

Query: 333 SGGSVACKSCTKTFNSEVAL 274
             G+  C  C   F+ E +L
Sbjct: 514 ENGAFFCNECDCRFSEEASL 533

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>OPGH_XANAC (Q8PPR7) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)|
          Length = 645

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = +2

Query: 314 QATDPPDLG--DLSLVAGVLPTFLAGCGVATWTAPFLSPVFWPDGVAILAFLSATGVLIS 487
           Q T PP +G     L+ G   T      +A W    +  V WPDG+++L      G L+ 
Sbjct: 50  QRTSPPGIGVRRFYLIGGTFAT----TAIAVWV---MLSVLWPDGISVL-----EGCLLG 97

Query: 488 LPAALF 505
           L   LF
Sbjct: 98  LFVLLF 103

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>FR1OP_RAT (Q4V7C1) FGFR1 oncogene partner|
          Length = 399

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = -3

Query: 528 PKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATS 349
           P K   GK     +  K P    + K  T SGQK+GDKK +   +   P+  + ++ + S
Sbjct: 157 PSKSPEGKTSVNSTPSKIPRYKGQGKKKT-SGQKSGDKKTSSETSQSEPSVSLSESKSKS 215

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>PSIP1_BOVIN (Q8MJG1) PC4 and SFRS1-interacting protein (Lens epithelium-derived|
           growth factor) (Fragment)
          Length = 483

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 13/81 (16%)
 Frame = -3

Query: 531 TPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKG-----AVHVATPHPAKKVG 367
           TPK    G+KR A   ++T  A         +  K   K+G      V +  P    K+ 
Sbjct: 94  TPKAARRGRKRKAEKQVETEEAGVVTTATASANLKVSPKRGRPAATEVKIPKPRGRPKMV 153

Query: 366 KTPATS--------DKSPKSG 328
           K P  S        DKS K G
Sbjct: 154 KQPCPSESDMITEEDKSKKKG 174

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>MARCS_CHICK (P16527) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
          Length = 280

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -3

Query: 519 QETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSDKS 340
           +ETGK+ AA S+  +     +A+   P+    G+           P  + G TP++S ++
Sbjct: 64  EETGKEEAASSEPASEKEAAEAESTEPASPAEGEAS---------PKTEEGATPSSSSET 114

Query: 339 PK 334
           PK
Sbjct: 115 PK 116

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>POLG_HCVJK (Q68801) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3018

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 309 TCRPPTLQTWATCRWLLGSCLPSWPGAGSQHGQPPSCHLFSG 434
           + RPPT + W  C W+ GS      GA       P CH++ G
Sbjct: 541 SARPPT-EPWFGCTWMNGSGYVKTCGA-------PPCHIYGG 574

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>CBX2_HUMAN (Q14781) Chromobox protein homolog 2|
          Length = 532

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 19/64 (29%), Positives = 24/64 (37%)
 Frame = -3

Query: 522 KQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPATSDK 343
           K E    RA          D     ATPSGQ++    G    A   P    G+  ++SD 
Sbjct: 410 KSEKLASRAVAPPTPASKRDCVKGSATPSGQESRTAPGEARKAATLPEMSAGEESSSSDS 469

Query: 342 SPKS 331
            P S
Sbjct: 470 DPDS 473


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,109,533
Number of Sequences: 219361
Number of extensions: 1581871
Number of successful extensions: 5377
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 5102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5342
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result