ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2n16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476044.1| Oryza sativa (japonica cultivar-group), predic... 60 8e-06
2gb|AF255711.1|AF255711 Oryza sativa putative histone deacetylase... 60 8e-06
3dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
4dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
5gb|AC004006.1| Homo sapiens PAC clone RP4-740B21 from 7, complet... 48 0.032
6emb|AJ234619.1|HVU234619 Hordeum vulgare genomic DNA fragment; c... 48 0.032
7gb|AY169336.1| Aeromonas schubertii strain CECT 4240 RNA polymer... 44 0.49
8gb|AY127864.1| Aeromonas schubertii RNA polymerase sigma factor ... 44 0.49
9gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
10gb|AC121499.9| Mus musculus chromosome 9, clone RP23-269E5, comp... 42 2.0
11gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, co... 42 2.0
12ref|XM_540478.2| PREDICTED: Canis familiaris similar to 5-azacyt... 42 2.0
13ref|XM_503529.1| Yarrowia lipolytica CLIB122, YALI0E04136g predi... 42 2.0
14emb|AL355587.14| Human DNA sequence from clone RP11-561H23 on ch... 42 2.0
15gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, com... 42 2.0
16dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
17gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, comp... 42 2.0
18gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
19emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 42 2.0
20gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7... 40 7.7
21gb|AC102714.16| Mus musculus chromosome 5, clone RP24-298D13, co... 40 7.7
22ref|XM_851441.1| PREDICTED: Canis familiaris similar to General ... 40 7.7
23ref|XM_851398.1| PREDICTED: Canis familiaris similar to General ... 40 7.7
24ref|XM_536013.2| PREDICTED: Canis familiaris similar to General ... 40 7.7
25ref|XM_814119.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.7
26emb|AL449283.13| Human DNA sequence from clone RP11-386I23 on ch... 40 7.7
27emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chr... 40 7.7
28emb|AL022310.1|HS395P12 Human DNA sequence from clone RP3-395P12... 40 7.7
29emb|BX057455.1|CNS09GHV Single read from an extremity of a full-... 40 7.7
30emb|BX047491.1|CNS098T3 Single read from an extremity of a full-... 40 7.7
31emb|BX039658.1|CNS092RI Single read from an extremity of a full-... 40 7.7
32emb|BX021020.1|CNS08ODS Single read from an extremity of a full-... 40 7.7
33gb|AC091304.15| Homo sapiens chromosome 15, clone RP11-483E23, c... 40 7.7
34dbj|AK127194.1| Homo sapiens cDNA FLJ45259 fis, clone BRHIP2020695 40 7.7
35gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, com... 40 7.7
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
37dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
38gb|AC073834.6| Homo sapiens BAC clone RP11-250N10 from 2, comple... 40 7.7
39gb|AC103893.2| Papio anubis clone RP41-216H1, complete sequence 40 7.7
40gb|AC132956.4| Mus musculus BAC clone RP23-106K20 from chromosom... 40 7.7
41gb|AF254072.1|AF254072 Zea mays histone deacetylase 2 isoform b ... 40 7.7
42gb|AC116892.10| Mus musculus chromosome 8, clone RP24-529J16, co... 40 7.7
43gb|AC145294.4| Mus musculus BAC clone RP23-88B16 from 7, complet... 40 7.7
44gb|AY104912.1| Zea mays PCO120143 mRNA sequence 40 7.7
45emb|CR628386.8| Zebrafish DNA sequence from clone CH211-241O7 in... 40 7.7
46gb|AC149596.2| Mus musculus BAC clone RP24-424J20 from 7, comple... 40 7.7 
>ref|XM_476044.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 894

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 410 cccttcttgtcacctgttttctggcctgatggtgttgcaattttggccttcttgtcag 467
           ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||| ||||
Sbjct: 713 cccttcttgtcacctgtcttctggcctgacggtgtagcaatctttgctttcttatcag 656
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>gb|AF255711.1|AF255711 Oryza sativa putative histone deacetylase HD2 mRNA, complete cds
          Length = 894

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 410 cccttcttgtcacctgttttctggcctgatggtgttgcaattttggccttcttgtcag 467
           ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||| ||||
Sbjct: 713 cccttcttgtcacctgtcttctggcctgacggtgtagcaatctttgctttcttatcag 656
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>dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142J09, full
           insert sequence
          Length = 1284

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 410 cccttcttgtcacctgttttctggcctgatggtgttgcaattttggccttcttgtcag 467
           ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||| ||||
Sbjct: 797 cccttcttgtcacctgtcttctggcctgacggtgtagcaatctttgctttcttatcag 740
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>dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B10, full
           insert sequence
          Length = 1161

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 410 cccttcttgtcacctgttttctggcctgatggtgttgcaattttggccttcttgtcag 467
           ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||| ||||
Sbjct: 798 cccttcttgtcacctgtcttctggcctgacggtgtagcaatctttgctttcttatcag 741
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>gb|AC004006.1| Homo sapiens PAC clone RP4-740B21 from 7, complete sequence
          Length = 119453

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 408    cccccttcttgtcacctgttttct 431
              ||||||||||||||||||||||||
Sbjct: 106915 cccccttcttgtcacctgttttct 106892
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>emb|AJ234619.1|HVU234619 Hordeum vulgare genomic DNA fragment; clone MWG0884.rev
          Length = 490

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 420 cacctgttttctggcctgatggtgttgcaattttggccttcttgtcag 467
           ||||||| | |||||| ||||||||| |||| || |||||||||||||
Sbjct: 247 cacctgtgtcctggccagatggtgtttcaatcttagccttcttgtcag 294
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>gb|AY169336.1| Aeromonas schubertii strain CECT 4240 RNA polymerase sigma-70
           factor (rpoD) gene, partial cds
          Length = 825

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 533 tcttcttcctcctcgtcagagctgtcctcgtcgg 566
           ||||| ||||| ||||| ||||||||||||||||
Sbjct: 274 tcttcctcctcttcgtcggagctgtcctcgtcgg 241
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>gb|AY127864.1| Aeromonas schubertii RNA polymerase sigma factor D gene, partial
           cds
          Length = 850

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 533 tcttcttcctcctcgtcagagctgtcctcgtcgg 566
           ||||| ||||| ||||| ||||||||||||||||
Sbjct: 302 tcttcctcctcttcgtcggagctgtcctcgtcgg 269
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>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0052C16, complete sequence
          Length = 137872

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 157   gggcaagaacacatcaatcaaaata 181
             ||||||||||||||||||| |||||
Sbjct: 67495 gggcaagaacacatcaatctaaata 67471
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>gb|AC121499.9| Mus musculus chromosome 9, clone RP23-269E5, complete sequence
          Length = 212061

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 193   aacccagccagccaaccaaca 213
             |||||||||||||||||||||
Sbjct: 80204 aacccagccagccaaccaaca 80224
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>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence
          Length = 204108

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    caacccagccagccaaccaac 212
              |||||||||||||||||||||
Sbjct: 128872 caacccagccagccaaccaac 128852
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>ref|XM_540478.2| PREDICTED: Canis familiaris similar to 5-azacytidine induced 1
           isoform a (LOC483359), mRNA
          Length = 3422

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 491 ccagccgccctcttcttccca 511
           |||||||||||||||||||||
Sbjct: 362 ccagccgccctcttcttccca 342
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>ref|XM_503529.1| Yarrowia lipolytica CLIB122, YALI0E04136g predicted mRNA
          Length = 2880

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 536  tcttcctcctcgtcagagctgtcctcgtc 564
            ||||||||||| |||||||| ||||||||
Sbjct: 1085 tcttcctcctcatcagagctctcctcgtc 1057
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>emb|AL355587.14| Human DNA sequence from clone RP11-561H23 on chromosome 10 Contains the
              3' end of a novel gene (KIAA1136) (FLJ37801) and a CpG
              island, complete sequence
          Length = 130039

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 428    ttctggcctgatggtgttgca 448
              |||||||||||||||||||||
Sbjct: 129130 ttctggcctgatggtgttgca 129110
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>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence
          Length = 162877

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 428    ttctggcctgatggtgttgca 448
              |||||||||||||||||||||
Sbjct: 161781 ttctggcctgatggtgttgca 161801
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 157     gggcaagaacacatcaatcaaaata 181
               ||||||||||||||||||| |||||
Sbjct: 6396101 gggcaagaacacatcaatctaaata 6396077
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>gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, complete sequence
          Length = 193220

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 370    taccttcttggccgggtgcgg 390
              |||||||||||||||||||||
Sbjct: 181556 taccttcttggccgggtgcgg 181576
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 157     gggcaagaacacatcaatcaaaata 181
               ||||||||||||||||||| |||||
Sbjct: 6462568 gggcaagaacacatcaatctaaata 6462544
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 536    tcttcctcctcgtcagagctgtcctcgtc 564
              ||||||||||| |||||||| ||||||||
Sbjct: 462235 tcttcctcctcatcagagctctcctcgtc 462263
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>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
              sequence
          Length = 253151

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 532    ttcttcttcctcctcgtcag 551
              ||||||||||||||||||||
Sbjct: 168831 ttcttcttcctcctcgtcag 168850
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>gb|AC102714.16| Mus musculus chromosome 5, clone RP24-298D13, complete sequence
          Length = 165774

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    aacccagccagccaaccaac 212
              ||||||||||||||||||||
Sbjct: 119896 aacccagccagccaaccaac 119915
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>ref|XM_851441.1| PREDICTED: Canis familiaris similar to General transcription factor
           3C polypeptide 3 (Transcription factor IIIC-gamma
           subunit) (TF3C-gamma) (TFIIIC 102 kDa subunit)
           (TFIIIC102), transcript variant 3 (LOC478851), mRNA
          Length = 2726

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 527 ggtgtttcttcttcctcctc 546
           ||||||||||||||||||||
Sbjct: 323 ggtgtttcttcttcctcctc 304
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>ref|XM_851398.1| PREDICTED: Canis familiaris similar to General transcription factor
           3C polypeptide 3 (Transcription factor IIIC-gamma
           subunit) (TF3C-gamma) (TFIIIC 102 kDa subunit)
           (TFIIIC102), transcript variant 2 (LOC478851), mRNA
          Length = 1286

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 527 ggtgtttcttcttcctcctc 546
           ||||||||||||||||||||
Sbjct: 382 ggtgtttcttcttcctcctc 363
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>ref|XM_536013.2| PREDICTED: Canis familiaris similar to General transcription factor
           3C polypeptide 3 (Transcription factor IIIC-gamma
           subunit) (TF3C-gamma) (TFIIIC 102 kDa subunit)
           (TFIIIC102), transcript variant 1 (LOC478851), mRNA
          Length = 3455

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 527 ggtgtttcttcttcctcctc 546
           ||||||||||||||||||||
Sbjct: 382 ggtgtttcttcttcctcctc 363
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>ref|XM_814119.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510431.260) partial mRNA
          Length = 1992

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 532 ttcttcttcctcctcgtcag 551
           ||||||||||||||||||||
Sbjct: 474 ttcttcttcctcctcgtcag 455
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>emb|AL449283.13| Human DNA sequence from clone RP11-386I23 on chromosome 1 Contains a
             GAJ protein pseudogene, complete sequence
          Length = 52920

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   cttcttgtcagcaacagggg 476
             ||||||||||||||||||||
Sbjct: 41117 cttcttgtcagcaacagggg 41136
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>emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chromosome 10 Contains two
             CpG islands, complete sequence
          Length = 131112

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   tcttgggtgtttcttcttcc 541
             ||||||||||||||||||||
Sbjct: 56659 tcttgggtgtttcttcttcc 56640
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>emb|AL022310.1|HS395P12 Human DNA sequence from clone RP3-395P12 on chromosome 1q24-25 Contains
             a glutamic-oxaloacetic transaminase 2, mitochondrial
             (aspartate aminotransferase 2)(GOT2) pseudogene, a novel
             gene and the TNFSF4 gene for tumor necrosis factor
             (ligand) superfamily, member 4 (tax-transcriptionally
             activated glycoprotein 1, 34kDa), complete sequence
          Length = 147724

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    tcccttccctcaggctcagg 84
             ||||||||||||||||||||
Sbjct: 53007 tcccttccctcaggctcagg 53026
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>emb|BX057455.1|CNS09GHV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC37BF11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 793

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 523 cttgggtgtttcttcttcctcctc 546
           |||||| |||||||||||||||||
Sbjct: 755 cttgggcgtttcttcttcctcctc 732
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>emb|BX047491.1|CNS098T3 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC21DD07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 839

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 523 cttgggtgtttcttcttcctcctc 546
           |||||| |||||||||||||||||
Sbjct: 623 cttgggcgtttcttcttcctcctc 600
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>emb|BX039658.1|CNS092RI Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC10AC06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 989

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 523 cttgggtgtttcttcttcctcctc 546
           |||||| |||||||||||||||||
Sbjct: 773 cttgggcgtttcttcttcctcctc 750
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>emb|BX021020.1|CNS08ODS Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA31AD12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 233

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 523 cttgggtgtttcttcttcctcctc 546
           |||||| |||||||||||||||||
Sbjct: 69  cttgggcgtttcttcttcctcctc 46
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>gb|AC091304.15| Homo sapiens chromosome 15, clone RP11-483E23, complete sequence
          Length = 179218

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    accttcttggccgggtgcgg 390
              ||||||||||||||||||||
Sbjct: 132729 accttcttggccgggtgcgg 132710
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>dbj|AK127194.1| Homo sapiens cDNA FLJ45259 fis, clone BRHIP2020695
          Length = 3056

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 445  tgcaattttggccttcttgt 464
            ||||||||||||||||||||
Sbjct: 2265 tgcaattttggccttcttgt 2246
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>gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, complete sequence
          Length = 228458

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    aacccagccagccaaccaac 212
              ||||||||||||||||||||
Sbjct: 219039 aacccagccagccaaccaac 219058
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 160      caagaacacatcaatcaaaa 179
                ||||||||||||||||||||
Sbjct: 38831836 caagaacacatcaatcaaaa 38831855
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>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1078G07
          Length = 199457

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    caagaacacatcaatcaaaa 179
              ||||||||||||||||||||
Sbjct: 104718 caagaacacatcaatcaaaa 104737
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>gb|AC073834.6| Homo sapiens BAC clone RP11-250N10 from 2, complete sequence
          Length = 172415

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 445    tgcaattttggccttcttgt 464
              ||||||||||||||||||||
Sbjct: 117138 tgcaattttggccttcttgt 117157
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>gb|AC103893.2| Papio anubis clone RP41-216H1, complete sequence
          Length = 155255

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   ccctcttcttcccagtctct 517
             ||||||||||||||||||||
Sbjct: 36080 ccctcttcttcccagtctct 36061
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>gb|AC132956.4| Mus musculus BAC clone RP23-106K20 from chromosome 7, complete sequence
          Length = 195204

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    ccagcgtaactgatagtctc 153
              ||||||||||||||||||||
Sbjct: 159773 ccagcgtaactgatagtctc 159792
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>gb|AF254072.1|AF254072 Zea mays histone deacetylase 2 isoform b mRNA, complete cds
          Length = 912

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 410 cccttcttgtcacctgttttctgg 433
           ||||||||| ||||||||||||||
Sbjct: 734 cccttcttgccacctgttttctgg 711
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>gb|AC116892.10| Mus musculus chromosome 8, clone RP24-529J16, complete sequence
          Length = 176340

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   acatagataatagataggta 123
             ||||||||||||||||||||
Sbjct: 35152 acatagataatagataggta 35133
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>gb|AC145294.4| Mus musculus BAC clone RP23-88B16 from 7, complete sequence
          Length = 217265

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   ccagcgtaactgatagtctc 153
             ||||||||||||||||||||
Sbjct: 89435 ccagcgtaactgatagtctc 89454
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>gb|AY104912.1| Zea mays PCO120143 mRNA sequence
          Length = 1305

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 410 cccttcttgtcacctgttttctgg 433
           ||||||||| ||||||||||||||
Sbjct: 823 cccttcttgccacctgttttctgg 800
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>emb|CR628386.8| Zebrafish DNA sequence from clone CH211-241O7 in linkage group 10,
              complete sequence
          Length = 148044

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    tcaacccagccagccaacca 210
              ||||||||||||||||||||
Sbjct: 140787 tcaacccagccagccaacca 140768
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>gb|AC149596.2| Mus musculus BAC clone RP24-424J20 from 7, complete sequence
          Length = 187362

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    ccagcgtaactgatagtctc 153
              ||||||||||||||||||||
Sbjct: 130306 ccagcgtaactgatagtctc 130287


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,931,338
Number of Sequences: 3902068
Number of extensions: 4931338
Number of successful extensions: 160447
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 160099
Number of HSP's gapped (non-prelim): 348
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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